Rroxscaffold_7G00198130

HVA22-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000440
Physical Location & Seq
Forward (+)
43089260 .. 43092794
3535 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00198130.1

Sequence Viewer

Length: 1467 bp
ATGAGCTTACTGGGTCTCGTTGGATTTGCGCTCCAATGCTTTGATGTTCTTGCATGGCCTCTCTTTGCTCTGGTCTATCCTCTGTATTCTTCCATTAGAGCAATCGAGACAAATTCCATTACAGATACTCACAAGATAAATACGTATTGGGTCGTCTTCTCATTGATCTTGCTATTTGAACATGCTTTTATGAAGCTCCTTGAATGGTTCCTGCTCTGGCCATACATTAGGCTACTGATTGTCTTCTTTTTGGTGATGCCACATTTTGATGGTGCCTTATTTGTCTATAAACACCTTATCTCTCCATGCCTCTCCATGGATCCCCAAATTGTTATCAACTTGTTCAACAAGCGGAAGGAGTCCCTTGTGAGAGATAACTTTCTCTCTGAGGTGGAGAGATATGTCAAGGAGAATGGACCTGAAAGTTTGGAAAAATTTATTGCTTGCAAGTCAACAAGGACAAATATCGATGTAAAAGAGTTCAATGCAGTTTCATCCATGGATAATGAAGCGTCAAAATCCTTAAAGCCAAATGGTGGACAGAATGATATCAAAGCTGTGCAGGTTAGTCAGGCAGAGCCTAATCTCACTGTGAATGAAGATGGATTTTCTTCTAGGAAGAAGAATGAAAAAGTCATCGAAGTTGCAGCCGACAGAGAAATTCTGAAGACTCCACCTCCAAAGAAAGTCCAGGAGTGGACCACAGTCAATCCGCTGCAAACTCAAACTTATGCAACTTTGAATTCCCTTCTCGGTGATAACAAACACGAGGCTACATACGAGGCACTGAAGATAAAGAATGAGGCAGAGCCTAAGCTCACTGGGCCTGAAAACTGTACTGTTGCTGCCATGGAAATAAATGAAAAGCCGGTTGAGGTTGGAACAGGTATAGAAGATCCAGAGTCTCCTAAAGAAGTCCAGAAAGAGTGGACTTGTGCTCTCTGTCAGGTAACTACTTCAAGTGAAAGCATTTTGAATTCCCACCTGCAAGGGAGAAAACACAAGGCAGCATATGAGGCACTGAAAGCAAGGAACCAGGCATTTGTGTCCAAGATTGCCCCAGCTTCGACTGCAAAAACATCCAATCAACCGAATAAGGAGCCAGGAAACAGTATTCCGAGCAGTGGATCAAAACAAAAAGTTACTGTAAGTGAAAATGTGCAAGGCCAGAAAAATAGTAGTCCAGCTCCAATCACAAAGAAGGACCACAAACTGAAAGAGGAGAGCGCAGATGGTGTATCCAGCAATGGCCAGAAGGGGAAAATTCCTATACACGTCGAGAAGGTACAAAGTCAACAACCAAAGCCAAATAAAGCTCCAAGGGTGAAGAGTACTCCTTTGTGGTGCGCAATTTGTAGCATGCACTATCCTGAGAAATCCATGCCGTCTCATCTCAGCGGAAAAAAACACAAAAAAAAGGTGCAAAAACTAGAAGAGAACCTAATGAAGCCCTGGGGCCCTTTGTAA

Protein Analysis

488

Amino Acids

54.61

Weight (kDa)

8.96

Isoelectric Point (pI)

39.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TB2_DP1_HVA22 PF03134 27 - 103 7.1e-19 TB2/DP1, HVA22 family
zf-met PF12874 310 - 334 3e-09 Zinc-finger of C2H2 type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000440)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20313 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_5g25851
prunus_persica Prupe.8G072900_v2.0.a1 Prupe.8G072900_v2.0.a1 Prupe.8G072900_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1
pyrus_communis pycom01g01210 pycom02g12000 pycom10g21410 pycom11g11060 pycom13g24280
rosa_chinensis RchiOBHm_Chr3g0461871 RchiOBHm_Chr4g0427221 RchiOBHm_Chr4g0427231 RchiOBHm_Chr6g0270081 RchiOBHm_Chr6g0270121 RchiOBHm_Chr6g0270151 RchiOBHm_Chr6g0270161 RchiOBHm_Chr6g0270171 RchiOBHm_Chr6g0270181 RchiOBHm_Chr6g0270191 RchiOBHm_Chr7g0229301
rosa_laevigata RLG00000013809 RLG00000013810 RLG00000013812 RLG00000013814 RLG00000013817 RLG00000013818
rosa_multiflora Rmu_sc0000918.1_g000004 Rmu_sc0000918.1_g000019 Rmu_sc0000918.1_g000027 Rmu_sc0002817.1_g000013 Rmu_sc0004366.1_g000009 Rmu_sc0004376.1_g000011 Rmu_sc0004376.1_g000014 Rmu_sc0004376.1_g000021 Rmu_sc0006909.1_g000002 Rmu_sc0011356.1_g000003 Rmu_sc0011369.1_g000005 Rmu_sc0017552.1_g000001
rosa_roxburghii Rroxscaffold_5G00354200 Rroxscaffold_7G00198080 Rroxscaffold_7G00198090 Rroxscaffold_7G00198100 Rroxscaffold_7G00198130 Rroxscaffold_7G00198170
rosa_rugosa Rorug06G0052400 Rorug06G0052500 Rorug06G0053000
rosa_samantha Rh6AG171300 Rh6AG171400 Rh6AG171800 Rh6AG171900 Rh6AG172000 Rh6AG172100 Rh6AG369700 Rh6BG175800 Rh6BG175900 Rh6BG176200 Rh6BG176300 Rh6CG170900 Rh6CG171100 Rh6CG171400 Rh6CG171500 Rh6CG171700 Rh6CG171900 Rh6CG172000 Rh6CG172100
rosa_wichuraiana Rw6G014730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 993
Acc16I TGCGCA 1 cut(s) 1348
Acc36I ACCTGC 2 cut(s) 553, 993
AccB1I GGYRCC 1 cut(s) 272
AccB7I CCANNNNNTGG 1 cut(s) 536
AciI CCGC 3 cut(s) 352, 713, 1398
AclWI GGATC 4 cut(s) 314, 327, 890, 1135
AcoI YGGCCR 2 cut(s) 218, 1249
AcsI RAATTY 6 cut(s) 112, 434, 660, 742, 976, 1263
AcuI CTGAAG 2 cut(s) 686, 809
AfaI GTAC 3 cut(s) 838, 1287, 1333
AfiI CCNNNNNNNGG 3 cut(s) 316, 536, 1124
AflIII ACRYGT 1 cut(s) 1273
AgsI TTSAA 7 cut(s) 179, 203, 346, 484, 742, 960, 976
AjiI CACGTC 1 cut(s) 1276
AjnI CCWGG 4 cut(s) 690, 1035, 1102, 1451
AluBI AGCT 7 cut(s) 6, 196, 557, 817, 1064, 1187, 1316
AluI AGCT 7 cut(s) 6, 196, 557, 817, 1064, 1187, 1316
Alw21I GWGCWC 1 cut(s) 940
Alw26I GTCTC 4 cut(s) 20, 101, 909, 1392
AlwI GGATC 4 cut(s) 314, 327, 890, 1135
AoxI GGCC 6 cut(s) 56, 218, 824, 1165, 1249, 1456
ApaI GGGCCC 1 cut(s) 1460
ApeKI GCWGC 4 cut(s) 647, 715, 845, 1007
ApoI RAATTY 6 cut(s) 112, 434, 660, 742, 976, 1263
AspLEI GCGC 3 cut(s) 31, 1229, 1349
AspS9I GGNCC 6 cut(s) 416, 699, 824, 1204, 1456, 1457
AsuHPI GGTGA 3 cut(s) 265, 767, 1336
AvaII GGWCC 3 cut(s) 416, 699, 1204
BaeGI GKGCMC 1 cut(s) 1460
BalI TGGCCA 2 cut(s) 220, 1251
BamHI GGATCC 1 cut(s) 319
BanI GGYRCC 1 cut(s) 272
BanII GRGCYC 1 cut(s) 1460
BauI CACGAG 1 cut(s) 767
BbsI GAAGAC 3 cut(s) 148, 235, 674
Bbv12I GWGCWC 1 cut(s) 940
BbvI GCAGC 4 cut(s) 659, 702, 832, 1019
BccI CCATC 3 cut(s) 263, 596, 1226
BceAI ACGGC 1 cut(s) 1369
BciT130I CCWGG 4 cut(s) 692, 1037, 1104, 1453
BciVI GTATCC 1 cut(s) 1249
BcoDI GTCTC 4 cut(s) 20, 101, 909, 1392
BfaI CTAG 2 cut(s) 615, 1430
BfuAI ACCTGC 2 cut(s) 553, 993
BfuI GTATCC 1 cut(s) 1249
BisI GCNGC 4 cut(s) 648, 716, 846, 1008
BlsI GCNGC 4 cut(s) 649, 717, 847, 1009
BmcAI AGTACT 1 cut(s) 1333
Bme1390I CCNGG 4 cut(s) 692, 1037, 1104, 1453
Bme18I GGWCC 3 cut(s) 416, 699, 1204
BmgBI CACGTC 1 cut(s) 1276
BmgT120I GGNCC 6 cut(s) 416, 699, 824, 1204, 1456, 1457
BmiI GGNNCC 7 cut(s) 209, 274, 321, 1034, 1101, 1457, 1458
BmrFI CCNGG 4 cut(s) 692, 1037, 1104, 1453
BmrI ACTGGG 2 cut(s) 20, 831
BmsI GCATC 1 cut(s) 246
BmuI ACTGGG 2 cut(s) 20, 831
BoxI GACNNNNGTC 1 cut(s) 704
BpiI GAAGAC 3 cut(s) 148, 235, 674
Bpu10I CCTNAGC 1 cut(s) 813
Bsa29I ATCGAT 1 cut(s) 468
BsaAI YACGTR 1 cut(s) 144
BsaI GGTCTC 1 cut(s) 20
BsaJI CCNNGG 6 cut(s) 315, 498, 849, 1319, 1451, 1452
BsaXI ACNNNNNCTCC 2 cut(s) 661, 691
Bsc4I CCNNNNNNNGG 3 cut(s) 316, 536, 1124
Bse118I RCCGGY 1 cut(s) 868
Bse1I ACTGG 2 cut(s) 15, 826
Bse3DI GCAATG 1 cut(s) 1252
BseBI CCWGG 4 cut(s) 692, 1037, 1104, 1453
BseCI ATCGAT 1 cut(s) 468
BseDI CCNNGG 6 cut(s) 315, 498, 849, 1319, 1451, 1452
BseGI GGATG 2 cut(s) 494, 1079
BseLI CCNNNNNNNGG 3 cut(s) 316, 536, 1124
BseMI GCAATG 1 cut(s) 1252
BseMII CTCAG 3 cut(s) 378, 1362, 1408
BseNI ACTGG 2 cut(s) 15, 826
BseRI GAGGAG 1 cut(s) 1235
BseSI GKGCMC 1 cut(s) 1460
BseXI GCAGC 4 cut(s) 659, 702, 832, 1019
BseYI CCCAGC 1 cut(s) 1060
BsgI GTGCAG 1 cut(s) 581
BshFI GGCC 6 cut(s) 58, 220, 826, 1167, 1251, 1458
BshNI GGYRCC 1 cut(s) 272
BshVI ATCGAT 1 cut(s) 468
BsiHKAI GWGCWC 1 cut(s) 940
BsiSI CCGG 1 cut(s) 869
BslFI GGGAC 1 cut(s) 346
BslI CCNNNNNNNGG 3 cut(s) 316, 536, 1124
BsmAI GTCTC 4 cut(s) 20, 101, 909, 1392
BsmBI CGTCTC 1 cut(s) 1392
BsmFI GGGAC 1 cut(s) 346
BsnI GGCC 6 cut(s) 58, 220, 826, 1167, 1251, 1458
Bso31I GGTCTC 1 cut(s) 20
Bsp120I GGGCCC 1 cut(s) 1456
Bsp1286I GDGCHC 2 cut(s) 940, 1460
Bsp143I GATC 4 cut(s) 165, 319, 895, 1127
Bsp19I CCATGG 3 cut(s) 315, 498, 849
BspACI CCGC 3 cut(s) 352, 713, 1398
BspANI GGCC 6 cut(s) 58, 220, 826, 1167, 1251, 1458
BspCNI CTCAG 3 cut(s) 379, 1363, 1407
BspDI ATCGAT 1 cut(s) 468
BspLI GGNNCC 7 cut(s) 209, 274, 321, 1034, 1101, 1457, 1458
BspMI ACCTGC 2 cut(s) 553, 993
BspPI GGATC 4 cut(s) 314, 327, 890, 1135
BspT107I GGYRCC 1 cut(s) 272
BspTNI GGTCTC 1 cut(s) 20
BsrDI GCAATG 1 cut(s) 1252
BsrFI RCCGGY 1 cut(s) 868
BsrI ACTGG 2 cut(s) 15, 826
BssAI RCCGGY 1 cut(s) 868
BssECI CCNNGG 6 cut(s) 315, 498, 849, 1319, 1451, 1452
BssMI GATC 4 cut(s) 165, 319, 895, 1127
BssSI CACGAG 1 cut(s) 767
BssT1I CCWWGG 4 cut(s) 315, 498, 849, 1319
Bst2BI CACGAG 1 cut(s) 767
Bst2UI CCWGG 4 cut(s) 692, 1037, 1104, 1453
Bst4CI ACNGT 6 cut(s) 592, 706, 836, 841, 1112, 1147
Bst6I CTCTTC 2 cut(s) 1322, 1428
BstBAI YACGTR 1 cut(s) 144
BstC8I GCNNGC 2 cut(s) 445, 1361
BstDEI CTNAG 4 cut(s) 387, 813, 1371, 1394
BstDSI CCRYGG 3 cut(s) 315, 498, 849
BstF5I GGATG 2 cut(s) 494, 1079
BstHHI GCGC 3 cut(s) 31, 1229, 1349
BstKTI GATC 4 cut(s) 168, 322, 898, 1130
BstMAI GTCTC 4 cut(s) 20, 101, 909, 1392
BstMBI GATC 4 cut(s) 165, 319, 895, 1127
BstMWI GCNNNNNNNGC 4 cut(s) 823, 1016, 1025, 1070
BstNI CCWGG 4 cut(s) 692, 1037, 1104, 1453
BstNSI RCATGY 2 cut(s) 185, 1363
BstPAI GACNNNNGTC 1 cut(s) 704
BstSCI CCNGG 4 cut(s) 690, 1035, 1102, 1451
BstSLI GKGCMC 1 cut(s) 1460
BstSNI TACGTA 1 cut(s) 144
BstV1I GCAGC 4 cut(s) 659, 702, 832, 1019
BstV2I GAAGAC 3 cut(s) 148, 235, 674
BstX2I RGATCY 2 cut(s) 319, 895
BstYI RGATCY 2 cut(s) 319, 895
Bsu15I ATCGAT 1 cut(s) 468
BsuI GTATCC 1 cut(s) 1249
BsuRI GGCC 6 cut(s) 58, 220, 826, 1167, 1251, 1458
BsuTUI ATCGAT 1 cut(s) 468
BtgI CCRYGG 3 cut(s) 315, 498, 849
BtrI CACGTC 1 cut(s) 1276
BtsCI GGATG 2 cut(s) 494, 1079
BtsI GCAGTG 1 cut(s) 1129
BtsIMutI CAGTG 5 cut(s) 588, 785, 819, 1019, 1129
BveI ACCTGC 2 cut(s) 553, 993
Cac8I GCNNGC 2 cut(s) 445, 1361
CfoI GCGC 3 cut(s) 31, 1229, 1349
Cfr10I RCCGGY 1 cut(s) 868
Cfr13I GGNCC 6 cut(s) 416, 699, 824, 1204, 1456, 1457
ClaI ATCGAT 1 cut(s) 468
CseI GACGC 1 cut(s) 501
Csp6I GTAC 3 cut(s) 837, 1286, 1332
CviAII CATG 8 cut(s) 54, 182, 306, 316, 499, 850, 1360, 1381
CviQI GTAC 3 cut(s) 837, 1286, 1332
DdeI CTNAG 4 cut(s) 387, 813, 1371, 1394
DpnI GATC 4 cut(s) 167, 321, 897, 1129
DpnII GATC 4 cut(s) 165, 319, 895, 1127
EaeI YGGCCR 2 cut(s) 218, 1249
Eam1104I CTCTTC 2 cut(s) 1322, 1428
EarI CTCTTC 2 cut(s) 1322, 1428
Eco105I TACGTA 1 cut(s) 144
Eco130I CCWWGG 4 cut(s) 315, 498, 849, 1319
Eco24I GRGCYC 1 cut(s) 1460
Eco31I GGTCTC 1 cut(s) 20
Eco32I GATATC 1 cut(s) 550
Eco47I GGWCC 3 cut(s) 416, 699, 1204
Eco57I CTGAAG 2 cut(s) 686, 809
EcoO109I RGGNCCY 2 cut(s) 1456, 1457
EcoRI GAATTC 2 cut(s) 742, 976
EcoRII CCWGG 4 cut(s) 690, 1035, 1102, 1451
EcoRV GATATC 1 cut(s) 550
EcoT14I CCWWGG 4 cut(s) 315, 498, 849, 1319
EcoT38I GRGCYC 1 cut(s) 1460
ErhI CCWWGG 4 cut(s) 315, 498, 849, 1319
Esp3I CGTCTC 1 cut(s) 1392
FaeI CATG 8 cut(s) 57, 185, 309, 319, 502, 853, 1363, 1384
FaqI GGGAC 1 cut(s) 346
FatI CATG 8 cut(s) 53, 181, 305, 315, 498, 849, 1359, 1380
FauNDI CATATG 1 cut(s) 1012
Fnu4HI GCNGC 4 cut(s) 648, 716, 846, 1008
FokI GGATG 2 cut(s) 481, 1066
FriOI GRGCYC 1 cut(s) 1460
Fsp4HI GCNGC 4 cut(s) 648, 716, 846, 1008
FspBI CTAG 2 cut(s) 615, 1430
FspI TGCGCA 1 cut(s) 1348
GlaI GCGC 3 cut(s) 30, 1228, 1348
GluI GCNGC 4 cut(s) 648, 716, 846, 1008
GsaI CCCAGC 1 cut(s) 1064
HaeIII GGCC 6 cut(s) 58, 220, 826, 1167, 1251, 1458
HapII CCGG 1 cut(s) 869
HgaI GACGC 1 cut(s) 501
HhaI GCGC 3 cut(s) 31, 1229, 1349
Hin1II CATG 8 cut(s) 57, 185, 309, 319, 502, 853, 1363, 1384
Hin6I GCGC 3 cut(s) 29, 1227, 1347
HinP1I GCGC 3 cut(s) 29, 1227, 1347
HincII GTYRAC 2 cut(s) 453, 1295
HindII GTYRAC 2 cut(s) 453, 1295
HinfI GANTC 3 cut(s) 359, 670, 902
HpaII CCGG 1 cut(s) 869
HphI GGTGA 3 cut(s) 265, 767, 1336
Hpy166II GTNNAC 5 cut(s) 453, 539, 699, 930, 1295
Hpy188I TCNGA 3 cut(s) 388, 666, 1119
Hpy188III TCNNGA 5 cut(s) 106, 899, 919, 1279, 1370
Hpy8I GTNNAC 5 cut(s) 453, 539, 699, 930, 1295
Hpy99I CGWCG 1 cut(s) 1280
HpyAV CCTTC 5 cut(s) 349, 758, 1195, 1249, 1276
HpyCH4III ACNGT 6 cut(s) 592, 706, 836, 841, 1112, 1147
HpyCH4IV ACGT 2 cut(s) 143, 1275
HpyF10VI GCNNNNNNNGC 4 cut(s) 823, 1016, 1025, 1070
HpyF3I CTNAG 4 cut(s) 387, 813, 1371, 1394
HpySE526I ACGT 2 cut(s) 143, 1275
Hsp92II CATG 8 cut(s) 57, 185, 309, 319, 502, 853, 1363, 1384
HspAI GCGC 3 cut(s) 29, 1227, 1347
Kzo9I GATC 4 cut(s) 165, 319, 895, 1127
LmnI GCTCC 5 cut(s) 36, 201, 1099, 1192, 1321
Lsp1109I GCAGC 4 cut(s) 659, 702, 832, 1019
LweI GCATC 1 cut(s) 246
MaeI CTAG 2 cut(s) 615, 1430
MaeII ACGT 2 cut(s) 143, 1275
MaeIII GTNAC 2 cut(s) 949, 1141
MalI GATC 4 cut(s) 167, 321, 897, 1129
MboI GATC 4 cut(s) 165, 319, 895, 1127
MflI RGATCY 2 cut(s) 319, 895
MhlI GDGCHC 2 cut(s) 940, 1460
MlsI TGGCCA 2 cut(s) 220, 1251
MluCI AATT 8 cut(s) 112, 327, 434, 660, 742, 976, 1263, 1350
MluNI TGGCCA 2 cut(s) 220, 1251
MlyI GAGTC 3 cut(s) 368, 664, 911
MmeI TCCRAC 1 cut(s) 859
Mox20I TGGCCA 2 cut(s) 220, 1251
MscI TGGCCA 2 cut(s) 220, 1251
MseI TTAA 1 cut(s) 524
MslI CAYNNNNRTG 1 cut(s) 267
Msp20I TGGCCA 2 cut(s) 220, 1251
MspA1I CMGCKG 2 cut(s) 715, 1398
MspI CCGG 1 cut(s) 869
MspR9I CCNGG 4 cut(s) 692, 1037, 1104, 1453
MvaI CCWGG 4 cut(s) 692, 1037, 1104, 1453
MwoI GCNNNNNNNGC 4 cut(s) 823, 1016, 1025, 1070
NcoI CCATGG 3 cut(s) 315, 498, 849
NdeI CATATG 1 cut(s) 1012
NdeII GATC 4 cut(s) 165, 319, 895, 1127
NlaIII CATG 8 cut(s) 57, 185, 309, 319, 502, 853, 1363, 1384
NlaIV GGNNCC 7 cut(s) 209, 274, 321, 1034, 1101, 1457, 1458
NsbI TGCGCA 1 cut(s) 1348
NspI RCATGY 2 cut(s) 185, 1363
PaeI GCATGC 1 cut(s) 1363
PaqCI CACCTGC 1 cut(s) 993
PasI CCCWGGG 1 cut(s) 1452
PflMI CCANNNNNTGG 1 cut(s) 536
PfoI TCCNGGA 1 cut(s) 690
PkrI GCNGC 4 cut(s) 649, 717, 847, 1009
PleI GAGTC 3 cut(s) 367, 664, 910
PpsI GAGTC 3 cut(s) 367, 664, 910
Ppu21I YACGTR 1 cut(s) 144
PshAI GACNNNNGTC 1 cut(s) 704
Psp6I CCWGG 4 cut(s) 690, 1035, 1102, 1451
PspFI CCCAGC 1 cut(s) 1060
PspGI CCWGG 4 cut(s) 690, 1035, 1102, 1451
PspN4I GGNNCC 7 cut(s) 209, 274, 321, 1034, 1101, 1457, 1458
PspOMI GGGCCC 1 cut(s) 1456
PspPI GGNCC 6 cut(s) 416, 699, 824, 1204, 1456, 1457
PsuI RGATCY 2 cut(s) 319, 895
RsaI GTAC 3 cut(s) 838, 1287, 1333
RsaNI GTAC 3 cut(s) 837, 1286, 1332
RseI CAYNNNNRTG 1 cut(s) 267
SaqAI TTAA 1 cut(s) 524
SatI GCNGC 4 cut(s) 648, 716, 846, 1008
Sau3AI GATC 4 cut(s) 165, 319, 895, 1127
Sau96I GGNCC 6 cut(s) 416, 699, 824, 1204, 1456, 1457
ScaI AGTACT 1 cut(s) 1333
SchI GAGTC 3 cut(s) 368, 664, 911
ScrFI CCNGG 4 cut(s) 692, 1037, 1104, 1453
SduI GDGCHC 2 cut(s) 940, 1460
SfaNI GCATC 1 cut(s) 246
SinI GGWCC 3 cut(s) 416, 699, 1204
SmiMI CAYNNNNRTG 1 cut(s) 267
SnaBI TACGTA 1 cut(s) 144
SphI GCATGC 1 cut(s) 1363
Sse9I AATT 8 cut(s) 112, 327, 434, 660, 742, 976, 1263, 1350
SsiI CCGC 3 cut(s) 352, 713, 1398
SspMI CTAG 2 cut(s) 615, 1430
StyD4I CCNGG 4 cut(s) 690, 1035, 1102, 1451
StyI CCWWGG 4 cut(s) 315, 498, 849, 1319
TaaI ACNGT 6 cut(s) 592, 706, 836, 841, 1112, 1147
TaiI ACGT 2 cut(s) 146, 1278
TaqI TCGA 5 cut(s) 105, 468, 639, 1067, 1278
TasI AATT 8 cut(s) 112, 327, 434, 660, 742, 976, 1263, 1350
TatI WGTACW 2 cut(s) 836, 1331
Tru1I TTAA 1 cut(s) 524
Tru9I TTAA 1 cut(s) 524
TscAI CASTG 5 cut(s) 595, 792, 826, 1026, 1129
TseI GCWGC 4 cut(s) 647, 715, 845, 1007
TspDTI ATGAA 7 cut(s) 206, 483, 522, 612, 642, 876, 1460
TspRI CASTG 5 cut(s) 595, 792, 826, 1026, 1129
Van91I CCANNNNNTGG 1 cut(s) 536
VpaK11BI GGWCC 3 cut(s) 416, 699, 1204
XapI RAATTY 6 cut(s) 112, 434, 660, 742, 976, 1263
XceI RCATGY 2 cut(s) 185, 1363
XspI CTAG 2 cut(s) 615, 1430
ZrmI AGTACT 1 cut(s) 1333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.