Rh6CG171700

HVA22-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0000440
Physical Location & Seq
Reverse (-)
23801691 .. 23805109
3419 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG171700.1

Sequence Viewer

Length: 1545 bp
ATGGGCTTACTGGGTCTTGTTGGATTTGCGCTCCAATGCTTTCATGTTCTTGCATGGCCTCTCTTTGCTCTGGTCTATCCTCTGTATTCTTCCATTAAAGCAATCGAGACAAATTCCATCACAGATACTCACAAGATAAACACGTATTGGGTCGTCTTCTCATTGATCTTGCTATTTGAACATGCTTTTATGAAGCTCCTTGAATGGTTCCTGCTCTGGCCATACATTAGGCTACTGATTGTCTTCTTTTTGGTGATGCCACATTTTGATGGTGCCTTATATGTCTATCAACACCTTATCTTTCCATGCCTCTCCATGGATCCCCAAATTGTTATTAACTTGTTCAACAAGAGGAAGGAGTCCCTTGTGAGAGATAACGTCCTCTCTGAGGTGGAGAGATATGTCAAGGAGAATGGACTTGAAGGTTTGGAAAAATTTATTGCTTGCAAGTCAACGAGGACAAATCTCAATGTAAAAGAGTTCAATGCAGTTTCATCCATGGATAATGAAGTGTCAAAATCCATAAAGCCAAATGGTGGACAGAATGATATCAAAGCTGTGCAGGAAATGGTGAAAAAGAAGGAGACAACTGCTAGCCAAGTTAGTCAGGCAGAGCCTAATCTCACTGTGAATGAAGATAAATTTTCTTCTAGGAAGATGAATGAAAAAGTCATCGAAGTTGCAGCCGACAGAGAAATTCTGAAGACTCCACCTCCAAAGAAAGTCCAGAAGGAGTGGACCTCAGTCAATCCGCTGCAAACTCAAACTGATGCAACGTTGACTTCCCTTCTCGGTGATAATAAACATCAGGCTACATACGAGGCACTGAAGATAAAGAATGAGGCAGAGCCTAAGCTCACTGGGCCTGAAAACCGTACTGTTGCAGCCATGGAAATAAATGAAAAGCTGGTTGAGGTTGGAACAGGTATAGAAGATCCAGGGTCTCCTAAAGAAGTCCAGAAAGAGTGGACTTGTGCTCTCTGTCAGGTAACTACTACATGTGAAAGAAATTTGAATTCCCACCTGCGAGGGAGAAAACACAAGGCAGCATATGAGGCACTGAAAGGGAACCAGGCATTTGTGCCCAAGATTGCCCCAGCTTTAACCGCAAAAACATCCAATCAACCAAATAAGGAGCCAGGAAAGAGTATTCCGAAGAAAATGGAAATGAAAATGAAAATGAAAATGTGCAAGGCCAGAAAAATAGTAGTCCAGCTCCAATCACAAAGAAGCAATCCAGCAATGGCCAGAAAGGGATCAAAACAAAAAGTTACTGTAAATGAAAATGTGCAAGGCCAGAAAAATAGTAGTCCAGCTCCAATCACAAAGAAGCAATCCAGCAATGGCCAGAAAGGGAAAATTGCTATACAGGTCGAGAAGGTACAAAGTCAACAACCGGAGCCAAATGAAGTTCCAAGGGTGAAGAGTTCTCCTTTGCGGTGCGCAATTTGTAGAATACGCTGTGCTGGTGAGATTGACATGCTGTCTCATCTCAACGGAAGAAAACACAAGGAAAATGTGCAAGAACGAAAAAAGAGAACCTAA

Protein Analysis

514

Amino Acids

58.02

Weight (kDa)

9.55

Isoelectric Point (pI)

34.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TB2_DP1_HVA22 PF03134 27 - 102 1.7e-18 TB2/DP1, HVA22 family
zf-met PF12874 323 - 347 2.2e-08 Zinc-finger of C2H2 type
zf-met PF12874 480 - 503 6.6e-07 Zinc-finger of C2H2 type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000440)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20313 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_5g25851
prunus_persica Prupe.8G072900_v2.0.a1 Prupe.8G072900_v2.0.a1 Prupe.8G072900_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1
pyrus_communis pycom01g01210 pycom02g12000 pycom10g21410 pycom11g11060 pycom13g24280
rosa_chinensis RchiOBHm_Chr3g0461871 RchiOBHm_Chr4g0427221 RchiOBHm_Chr4g0427231 RchiOBHm_Chr6g0270081 RchiOBHm_Chr6g0270121 RchiOBHm_Chr6g0270151 RchiOBHm_Chr6g0270161 RchiOBHm_Chr6g0270171 RchiOBHm_Chr6g0270181 RchiOBHm_Chr6g0270191 RchiOBHm_Chr7g0229301
rosa_laevigata RLG00000013809 RLG00000013810 RLG00000013812 RLG00000013814 RLG00000013817 RLG00000013818
rosa_multiflora Rmu_sc0000918.1_g000004 Rmu_sc0000918.1_g000019 Rmu_sc0000918.1_g000027 Rmu_sc0002817.1_g000013 Rmu_sc0004366.1_g000009 Rmu_sc0004376.1_g000011 Rmu_sc0004376.1_g000014 Rmu_sc0004376.1_g000021 Rmu_sc0006909.1_g000002 Rmu_sc0011356.1_g000003 Rmu_sc0011369.1_g000005 Rmu_sc0017552.1_g000001
rosa_roxburghii Rroxscaffold_5G00354200 Rroxscaffold_7G00198080 Rroxscaffold_7G00198090 Rroxscaffold_7G00198100 Rroxscaffold_7G00198130 Rroxscaffold_7G00198170
rosa_rugosa Rorug06G0052400 Rorug06G0052500 Rorug06G0053000
rosa_samantha Rh6AG171300 Rh6AG171400 Rh6AG171800 Rh6AG171900 Rh6AG172000 Rh6AG172100 Rh6AG369700 Rh6BG175800 Rh6BG175900 Rh6BG176200 Rh6BG176300 Rh6CG170900 Rh6CG171100 Rh6CG171400 Rh6CG171500 Rh6CG171700 Rh6CG171900 Rh6CG172000 Rh6CG172100
rosa_wichuraiana Rw6G014730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1032
Acc16I TGCGCA 1 cut(s) 1444
Acc36I ACCTGC 1 cut(s) 1032
AccB1I GGYRCC 1 cut(s) 272
AccB7I CCANNNNNTGG 1 cut(s) 536
AciI CCGC 3 cut(s) 752, 1107, 1438
AclI AACGTT 1 cut(s) 776
AclWI GGATC 4 cut(s) 314, 327, 929, 1264
AcoI YGGCCR 3 cut(s) 218, 1245, 1345
AcsI RAATTY 6 cut(s) 112, 434, 641, 696, 1009, 1015
AcuI CTGAAG 2 cut(s) 722, 848
AfaI GTAC 2 cut(s) 877, 1383
AfiI CCNNNNNNNGG 3 cut(s) 316, 388, 536
AflIII ACRYGT 2 cut(s) 141, 998
AgsI TTSAA 6 cut(s) 179, 203, 346, 422, 484, 1015
AhdI GACNNNNNGTC 1 cut(s) 1483
AjnI CCWGG 3 cut(s) 937, 1071, 1138
AluBI AGCT 7 cut(s) 196, 557, 856, 907, 1100, 1216, 1316
AluI AGCT 7 cut(s) 196, 557, 856, 907, 1100, 1216, 1316
Alw21I GWGCWC 1 cut(s) 979
Alw26I GTCTC 4 cut(s) 101, 578, 948, 1491
AlwI GGATC 4 cut(s) 314, 327, 929, 1264
AoxI GGCC 7 cut(s) 56, 218, 863, 1194, 1245, 1294, 1345
ApeKI GCWGC 4 cut(s) 683, 754, 884, 1046
ApoI RAATTY 6 cut(s) 112, 434, 641, 696, 1009, 1015
AspLEI GCGC 2 cut(s) 31, 1445
AspS9I GGNCC 2 cut(s) 738, 863
AsuHPI GGTGA 5 cut(s) 265, 583, 806, 1432, 1481
AsuNHI GCTAGC 1 cut(s) 593
AvaII GGWCC 1 cut(s) 738
BaeGI GKGCMC 1 cut(s) 1086
BalI TGGCCA 3 cut(s) 220, 1247, 1347
BamHI GGATCC 1 cut(s) 319
BanI GGYRCC 1 cut(s) 272
BbsI GAAGAC 3 cut(s) 148, 235, 710
Bbv12I GWGCWC 1 cut(s) 979
BbvI GCAGC 4 cut(s) 695, 741, 896, 1058
BccI CCATC 2 cut(s) 125, 263
BciT130I CCWGG 3 cut(s) 939, 1073, 1140
BcoDI GTCTC 4 cut(s) 101, 578, 948, 1491
BfaI CTAG 2 cut(s) 594, 651
BfuAI ACCTGC 1 cut(s) 1032
BisI GCNGC 4 cut(s) 684, 755, 885, 1047
BlsI GCNGC 4 cut(s) 685, 756, 886, 1048
Bme1390I CCNGG 3 cut(s) 939, 1073, 1140
Bme18I GGWCC 1 cut(s) 738
BmeRI GACNNNNNGTC 1 cut(s) 1483
BmgT120I GGNCC 2 cut(s) 738, 863
BmiI GGNNCC 6 cut(s) 209, 274, 321, 1070, 1137, 1401
BmrFI CCNGG 3 cut(s) 939, 1073, 1140
BmrI ACTGGG 2 cut(s) 20, 870
BmsI GCATC 2 cut(s) 246, 760
BmtI GCTAGC 1 cut(s) 597
BmuI ACTGGG 2 cut(s) 20, 870
BoxI GACNNNNGTC 1 cut(s) 743
BpiI GAAGAC 3 cut(s) 148, 235, 710
BplI GAGNNNNNCTC 2 cut(s) 725, 757
Bpu10I CCTNAGC 1 cut(s) 852
BsaAI YACGTR 1 cut(s) 144
BsaI GGTCTC 1 cut(s) 948
BsaJI CCNNGG 5 cut(s) 315, 498, 888, 938, 1415
BsaWI WCCGGW 1 cut(s) 1396
BsaXI ACNNNNNCTCC 2 cut(s) 697, 727
Bsc4I CCNNNNNNNGG 3 cut(s) 316, 388, 536
Bse1I ACTGG 2 cut(s) 15, 865
Bse3DI GCAATG 2 cut(s) 1248, 1348
BseBI CCWGG 3 cut(s) 939, 1073, 1140
BseDI CCNNGG 5 cut(s) 315, 498, 888, 938, 1415
BseGI GGATG 2 cut(s) 494, 1115
BseLI CCNNNNNNNGG 3 cut(s) 316, 388, 536
BseMI GCAATG 2 cut(s) 1248, 1348
BseMII CTCAG 2 cut(s) 378, 756
BseNI ACTGG 2 cut(s) 15, 865
BseSI GKGCMC 1 cut(s) 1086
BseXI GCAGC 4 cut(s) 695, 741, 896, 1058
BseYI CCCAGC 1 cut(s) 1096
BsgI GTGCAG 1 cut(s) 581
BshFI GGCC 7 cut(s) 58, 220, 865, 1196, 1247, 1296, 1347
BshNI GGYRCC 1 cut(s) 272
BsiHKAI GWGCWC 1 cut(s) 979
BsiSI CCGG 1 cut(s) 1397
BslFI GGGAC 1 cut(s) 346
BslI CCNNNNNNNGG 3 cut(s) 316, 388, 536
BsmAI GTCTC 4 cut(s) 101, 578, 948, 1491
BsmFI GGGAC 1 cut(s) 346
BsnI GGCC 7 cut(s) 58, 220, 865, 1196, 1247, 1296, 1347
Bso31I GGTCTC 1 cut(s) 948
Bsp1286I GDGCHC 2 cut(s) 979, 1086
Bsp143I GATC 4 cut(s) 165, 319, 934, 1256
Bsp19I CCATGG 3 cut(s) 315, 498, 888
BspACI CCGC 3 cut(s) 752, 1107, 1438
BspANI GGCC 7 cut(s) 58, 220, 865, 1196, 1247, 1296, 1347
BspCNI CTCAG 2 cut(s) 379, 755
BspLI GGNNCC 6 cut(s) 209, 274, 321, 1070, 1137, 1401
BspMI ACCTGC 1 cut(s) 1032
BspOI GCTAGC 1 cut(s) 597
BspPI GGATC 4 cut(s) 314, 327, 929, 1264
BspT107I GGYRCC 1 cut(s) 272
BspTNI GGTCTC 1 cut(s) 948
BsrDI GCAATG 2 cut(s) 1248, 1348
BsrI ACTGG 2 cut(s) 15, 865
BssECI CCNNGG 5 cut(s) 315, 498, 888, 938, 1415
BssMI GATC 4 cut(s) 165, 319, 934, 1256
BssT1I CCWWGG 4 cut(s) 315, 498, 888, 1415
Bst2UI CCWGG 3 cut(s) 939, 1073, 1140
Bst4CI ACNGT 4 cut(s) 628, 875, 880, 1276
Bst6I CTCTTC 1 cut(s) 1418
BstBAI YACGTR 1 cut(s) 144
BstC8I GCNNGC 2 cut(s) 445, 595
BstDEI CTNAG 3 cut(s) 387, 742, 852
BstDSI CCRYGG 3 cut(s) 315, 498, 888
BstENI CCTNNNNNAGG 1 cut(s) 386
BstF5I GGATG 2 cut(s) 494, 1115
BstHHI GCGC 2 cut(s) 31, 1445
BstKTI GATC 4 cut(s) 168, 322, 937, 1259
BstMAI GTCTC 4 cut(s) 101, 578, 948, 1491
BstMBI GATC 4 cut(s) 165, 319, 934, 1256
BstMWI GCNNNNNNNGC 3 cut(s) 862, 1055, 1106
BstNI CCWGG 3 cut(s) 939, 1073, 1140
BstNSI RCATGY 3 cut(s) 185, 1002, 1483
BstPAI GACNNNNGTC 1 cut(s) 743
BstSCI CCNGG 3 cut(s) 937, 1071, 1138
BstSLI GKGCMC 1 cut(s) 1086
BstV1I GCAGC 4 cut(s) 695, 741, 896, 1058
BstV2I GAAGAC 3 cut(s) 148, 235, 710
BstX2I RGATCY 2 cut(s) 319, 934
BstYI RGATCY 2 cut(s) 319, 934
BsuRI GGCC 7 cut(s) 58, 220, 865, 1196, 1247, 1296, 1347
BtgI CCRYGG 3 cut(s) 315, 498, 888
BtsCI GGATG 2 cut(s) 494, 1115
BtsIMutI CAGTG 4 cut(s) 624, 824, 858, 1058
BveI ACCTGC 1 cut(s) 1032
Cac8I GCNNGC 2 cut(s) 445, 595
CfoI GCGC 2 cut(s) 31, 1445
Cfr13I GGNCC 2 cut(s) 738, 863
Csp6I GTAC 2 cut(s) 876, 1382
CviAII CATG 9 cut(s) 44, 54, 182, 306, 316, 499, 889, 999, 1480
CviQI GTAC 2 cut(s) 876, 1382
DdeI CTNAG 3 cut(s) 387, 742, 852
DpnI GATC 4 cut(s) 167, 321, 936, 1258
DpnII GATC 4 cut(s) 165, 319, 934, 1256
DriI GACNNNNNGTC 1 cut(s) 1483
EaeI YGGCCR 3 cut(s) 218, 1245, 1345
Eam1104I CTCTTC 1 cut(s) 1418
Eam1105I GACNNNNNGTC 1 cut(s) 1483
EarI CTCTTC 1 cut(s) 1418
Eco130I CCWWGG 4 cut(s) 315, 498, 888, 1415
Eco31I GGTCTC 1 cut(s) 948
Eco32I GATATC 1 cut(s) 550
Eco47I GGWCC 1 cut(s) 738
Eco57I CTGAAG 2 cut(s) 722, 848
EcoNI CCTNNNNNAGG 1 cut(s) 386
EcoRI GAATTC 1 cut(s) 1015
EcoRII CCWGG 3 cut(s) 937, 1071, 1138
EcoRV GATATC 1 cut(s) 550
EcoT14I CCWWGG 4 cut(s) 315, 498, 888, 1415
ErhI CCWWGG 4 cut(s) 315, 498, 888, 1415
FaeI CATG 9 cut(s) 47, 57, 185, 309, 319, 502, 892, 1002, 1483
FaqI GGGAC 1 cut(s) 346
FatI CATG 9 cut(s) 43, 53, 181, 305, 315, 498, 888, 998, 1479
FauNDI CATATG 1 cut(s) 1051
Fnu4HI GCNGC 4 cut(s) 684, 755, 885, 1047
FokI GGATG 2 cut(s) 481, 1102
Fsp4HI GCNGC 4 cut(s) 684, 755, 885, 1047
FspBI CTAG 2 cut(s) 594, 651
FspI TGCGCA 1 cut(s) 1444
GlaI GCGC 2 cut(s) 30, 1444
GluI GCNGC 4 cut(s) 684, 755, 885, 1047
GsaI CCCAGC 1 cut(s) 1100
HaeIII GGCC 7 cut(s) 58, 220, 865, 1196, 1247, 1296, 1347
HapII CCGG 1 cut(s) 1397
HhaI GCGC 2 cut(s) 31, 1445
Hin1II CATG 9 cut(s) 47, 57, 185, 309, 319, 502, 892, 1002, 1483
Hin6I GCGC 2 cut(s) 29, 1443
HinP1I GCGC 2 cut(s) 29, 1443
HincII GTYRAC 3 cut(s) 453, 780, 1391
HindII GTYRAC 3 cut(s) 453, 780, 1391
HinfI GANTC 2 cut(s) 359, 706
HpaII CCGG 1 cut(s) 1397
HphI GGTGA 5 cut(s) 265, 583, 806, 1432, 1481
Hpy166II GTNNAC 6 cut(s) 453, 539, 738, 780, 969, 1391
Hpy188I TCNGA 3 cut(s) 388, 702, 1155
Hpy188III TCNNGA 4 cut(s) 106, 727, 958, 1375
Hpy8I GTNNAC 6 cut(s) 453, 539, 738, 780, 969, 1391
HpyAV CCTTC 6 cut(s) 349, 416, 574, 724, 797, 1372
HpyCH4III ACNGT 4 cut(s) 628, 875, 880, 1276
HpyCH4IV ACGT 3 cut(s) 143, 378, 776
HpyF10VI GCNNNNNNNGC 3 cut(s) 862, 1055, 1106
HpyF3I CTNAG 3 cut(s) 387, 742, 852
HpySE526I ACGT 3 cut(s) 143, 378, 776
Hsp92II CATG 9 cut(s) 47, 57, 185, 309, 319, 502, 892, 1002, 1483
HspAI GCGC 2 cut(s) 29, 1443
Kzo9I GATC 4 cut(s) 165, 319, 934, 1256
LmnI GCTCC 6 cut(s) 36, 201, 1135, 1221, 1321, 1399
Lsp1109I GCAGC 4 cut(s) 695, 741, 896, 1058
LweI GCATC 2 cut(s) 246, 760
MaeI CTAG 2 cut(s) 594, 651
MaeII ACGT 3 cut(s) 143, 378, 776
MaeIII GTNAC 2 cut(s) 988, 1270
MalI GATC 4 cut(s) 167, 321, 936, 1258
MboI GATC 4 cut(s) 165, 319, 934, 1256
MflI RGATCY 2 cut(s) 319, 934
MhlI GDGCHC 2 cut(s) 979, 1086
MlsI TGGCCA 3 cut(s) 220, 1247, 1347
MluCI AATT 9 cut(s) 112, 327, 434, 641, 696, 1009, 1015, 1359, 1446
MluNI TGGCCA 3 cut(s) 220, 1247, 1347
MlyI GAGTC 2 cut(s) 368, 700
MmeI TCCRAC 1 cut(s) 898
Mox20I TGGCCA 3 cut(s) 220, 1247, 1347
MscI TGGCCA 3 cut(s) 220, 1247, 1347
MseI TTAA 3 cut(s) 96, 336, 1103
MslI CAYNNNNRTG 1 cut(s) 267
Msp20I TGGCCA 3 cut(s) 220, 1247, 1347
MspA1I CMGCKG 1 cut(s) 754
MspI CCGG 1 cut(s) 1397
MspR9I CCNGG 3 cut(s) 939, 1073, 1140
MvaI CCWGG 3 cut(s) 939, 1073, 1140
MwoI GCNNNNNNNGC 3 cut(s) 862, 1055, 1106
NcoI CCATGG 3 cut(s) 315, 498, 888
NdeI CATATG 1 cut(s) 1051
NdeII GATC 4 cut(s) 165, 319, 934, 1256
NheI GCTAGC 1 cut(s) 593
NlaIII CATG 9 cut(s) 47, 57, 185, 309, 319, 502, 892, 1002, 1483
NlaIV GGNNCC 6 cut(s) 209, 274, 321, 1070, 1137, 1401
NsbI TGCGCA 1 cut(s) 1444
NspI RCATGY 3 cut(s) 185, 1002, 1483
PaqCI CACCTGC 1 cut(s) 1032
PciI ACATGT 1 cut(s) 998
PflMI CCANNNNNTGG 1 cut(s) 536
PkrI GCNGC 4 cut(s) 685, 756, 886, 1048
PleI GAGTC 2 cut(s) 367, 700
PpsI GAGTC 2 cut(s) 367, 700
Ppu21I YACGTR 1 cut(s) 144
PscI ACATGT 1 cut(s) 998
PshAI GACNNNNGTC 1 cut(s) 743
Psp1406I AACGTT 1 cut(s) 776
Psp6I CCWGG 3 cut(s) 937, 1071, 1138
PspFI CCCAGC 1 cut(s) 1096
PspGI CCWGG 3 cut(s) 937, 1071, 1138
PspN4I GGNNCC 6 cut(s) 209, 274, 321, 1070, 1137, 1401
PspPI GGNCC 2 cut(s) 738, 863
PsuI RGATCY 2 cut(s) 319, 934
RsaI GTAC 2 cut(s) 877, 1383
RsaNI GTAC 2 cut(s) 876, 1382
RseI CAYNNNNRTG 1 cut(s) 267
SaqAI TTAA 3 cut(s) 96, 336, 1103
SatI GCNGC 4 cut(s) 684, 755, 885, 1047
Sau3AI GATC 4 cut(s) 165, 319, 934, 1256
Sau96I GGNCC 2 cut(s) 738, 863
SchI GAGTC 2 cut(s) 368, 700
ScrFI CCNGG 3 cut(s) 939, 1073, 1140
SduI GDGCHC 2 cut(s) 979, 1086
SfaNI GCATC 2 cut(s) 246, 760
SinI GGWCC 1 cut(s) 738
SmiMI CAYNNNNRTG 1 cut(s) 267
Sse9I AATT 9 cut(s) 112, 327, 434, 641, 696, 1009, 1015, 1359, 1446
SsiI CCGC 3 cut(s) 752, 1107, 1438
SspMI CTAG 2 cut(s) 594, 651
StyD4I CCNGG 3 cut(s) 937, 1071, 1138
StyI CCWWGG 4 cut(s) 315, 498, 888, 1415
TaaI ACNGT 4 cut(s) 628, 875, 880, 1276
TaiI ACGT 3 cut(s) 146, 381, 779
TaqI TCGA 3 cut(s) 105, 675, 1374
TasI AATT 9 cut(s) 112, 327, 434, 641, 696, 1009, 1015, 1359, 1446
Tru1I TTAA 3 cut(s) 96, 336, 1103
Tru9I TTAA 3 cut(s) 96, 336, 1103
TscAI CASTG 4 cut(s) 631, 831, 865, 1065
TseI GCWGC 4 cut(s) 683, 754, 884, 1046
TspGWI ACGGA 1 cut(s) 1512
TspRI CASTG 4 cut(s) 631, 831, 865, 1065
Van91I CCANNNNNTGG 1 cut(s) 536
VpaK11BI GGWCC 1 cut(s) 738
XagI CCTNNNNNAGG 1 cut(s) 386
XapI RAATTY 6 cut(s) 112, 434, 641, 696, 1009, 1015
XceI RCATGY 3 cut(s) 185, 1002, 1483
XspI CTAG 2 cut(s) 594, 651
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.