Rh6BG176200

HVA22-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0000440
Physical Location & Seq
Reverse (-)
29742071 .. 29801436
59366 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG176200.1

Sequence Viewer

Length: 1536 bp
ATGGAAATATATGAAAAGCTGGTTGAGGTTGGAACATGTATAGAAGATCCAGAGCATCCTAAAGAAGTCCAAAAGGAGTGGACATGTGCTCTCTGTCAGGTTATTTCATTGGTCTTTTTGAAATTGTGGAGCGGGACGCTCCCGTTGGCAGTGCAGCCTTGCCCCCCAATAAATTTTATTTTCTTGTTCCTGCTCTGGCCATACATTAGGCTACTGATCGTCTTCTTTCTGGTGATGCCACATTTTGATGGTGCCTTATATGTCTATAAACACCTTATCTGTCCATGCCTCTCCATGGATCCCCAAATTGTTATCAACTTGTTCAACAAGCAGGAGTCCCTTGTGAGAGATAACTTTCTCTCTGAGGTTGAGAGATATGTCAAGGAGAATGGACCTGAAGGTTTGGAAAAATTTATTGCTTGCAAGTCAACAAGGACAAATCTCTATGTACAAGAGTTCAATGCAGTTTCATCCATGGATAATGAAGCGTCAAAATCCTTAAAGCCGAATGATCGACAGAATGATATCAAAGCTGTGCCGGTAATGGCAAAAAAGAAGGAAACAACTGCTACTCAAGCAGAGCCTAATCTCACTGTGAATGAAGATGGATTTTCTTCTAGGAAGATGAATGAAAAAGTCATCGAAGTTGCAGCCGACAGGGAAATTCTGAAGACTCCGCTTCCAATGAGAGTCCAGAAGGAGTGGACCACAGTCAATCCGGTGCAAACTCAAACTGATGCAACTTTGAATTCCCCTCTCAGTGATAATAAACACAAGCCTCCAATGAGAGTCCAGAAGGAGTGGACCACAGTCAATCCGGTGCAAACTCAAACTGATGCAACTTTGAATTCCCCTCTCGGTGATAATAAACACAAGGCTACATACGAGGCACTGAACATAAAGAATGAGGCAGAGCCTAAGCTCACTTGCCCTGAAAACCGTACTGTTGCAGGTATAGAAGATCCAGAGTCTCCTAAAGAAGTCCAGAAAGAGTGGACTTGTGCTCTCTGTCAGGTAACTACTTCAAGTGAAAGCATTTTGAATTCCCACCTGCAAGGGAGAAGACACAAGGCAGCATATGAGGCACTGAAAGCAAGGAACCAGGCATTTGTGTCCAAGATTGCCCCAGCTTCAACTGCAGAAACATCCAATCAACCGAATAAGGAGCCAGGAAAGAGTATTCCGAGCAGTGGATCAAAACAAAAAGTTCCTGTAAGTGAAAATGTGCAAGGCCAGAAAAATAGTAGTCCAGCTCCAATCACAAAGAAGCACCACAAACAGAAAGAGGAGCGTGCAGACGGTGTATCCAGCAATGGCCAGAAAGGGAAAATTCCTATACACGTCGAGAAGGTACAAAGTCAACAAACGAAGCCAAATAAAGTTCCAAGGGTGAAGAGTTCTCCTTTGTGGTGCGCAATTTGTAGCATACGCTGTCCTGGTGAGATTGACTTGCTGTCTCATATCAATGGAAAAAAACACAAGGAAAAGGTGCAAGAACTACAAGAGAACCTAATCAAGCCCAGGGACCCTTTGTAA

Protein Analysis

511

Amino Acids

57.45

Weight (kDa)

8.69

Isoelectric Point (pI)

41.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-met PF12874 332 - 356 8.2e-09 Zinc-finger of C2H2 type
zf-met PF12874 469 - 493 9.4e-07 Zinc-finger of C2H2 type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000440)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20313 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_5g25851
prunus_persica Prupe.8G072900_v2.0.a1 Prupe.8G072900_v2.0.a1 Prupe.8G072900_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1
pyrus_communis pycom01g01210 pycom02g12000 pycom10g21410 pycom11g11060 pycom13g24280
rosa_chinensis RchiOBHm_Chr3g0461871 RchiOBHm_Chr4g0427221 RchiOBHm_Chr4g0427231 RchiOBHm_Chr6g0270081 RchiOBHm_Chr6g0270121 RchiOBHm_Chr6g0270151 RchiOBHm_Chr6g0270161 RchiOBHm_Chr6g0270171 RchiOBHm_Chr6g0270181 RchiOBHm_Chr6g0270191 RchiOBHm_Chr7g0229301
rosa_laevigata RLG00000013809 RLG00000013810 RLG00000013812 RLG00000013814 RLG00000013817 RLG00000013818
rosa_multiflora Rmu_sc0000918.1_g000004 Rmu_sc0000918.1_g000019 Rmu_sc0000918.1_g000027 Rmu_sc0002817.1_g000013 Rmu_sc0004366.1_g000009 Rmu_sc0004376.1_g000011 Rmu_sc0004376.1_g000014 Rmu_sc0004376.1_g000021 Rmu_sc0006909.1_g000002 Rmu_sc0011356.1_g000003 Rmu_sc0011369.1_g000005 Rmu_sc0017552.1_g000001
rosa_roxburghii Rroxscaffold_5G00354200 Rroxscaffold_7G00198080 Rroxscaffold_7G00198090 Rroxscaffold_7G00198100 Rroxscaffold_7G00198130 Rroxscaffold_7G00198170
rosa_rugosa Rorug06G0052400 Rorug06G0052500 Rorug06G0053000
rosa_samantha Rh6AG171300 Rh6AG171400 Rh6AG171800 Rh6AG171900 Rh6AG172000 Rh6AG172100 Rh6AG369700 Rh6BG175800 Rh6BG175900 Rh6BG176200 Rh6BG176300 Rh6CG170900 Rh6CG171100 Rh6CG171400 Rh6CG171500 Rh6CG171700 Rh6CG171900 Rh6CG172000 Rh6CG172100
rosa_wichuraiana Rw6G014730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1059
Acc16I TGCGCA 1 cut(s) 1414
Acc36I ACCTGC 2 cut(s) 941, 1059
AccB1I GGYRCC 1 cut(s) 251
AccBSI CCGCTC 1 cut(s) 132
AciI CCGC 2 cut(s) 132, 677
AclWI GGATC 5 cut(s) 41, 293, 306, 956, 1201
AcoI YGGCCR 2 cut(s) 197, 1315
AcsI RAATTY 7 cut(s) 172, 410, 663, 748, 847, 1042, 1329
AcuI CTGAAG 2 cut(s) 417, 689
AfaI GTAC 3 cut(s) 450, 943, 1353
AfiI CCNNNNNNNGG 2 cut(s) 295, 1190
AflIII ACRYGT 3 cut(s) 35, 83, 1339
AgsI TTSAA 8 cut(s) 121, 325, 460, 748, 847, 1026, 1042, 1134
AhdI GACNNNNNGTC 1 cut(s) 1453
AjiI CACGTC 1 cut(s) 1342
AjnI CCWGG 4 cut(s) 1101, 1168, 1435, 1520
AluBI AGCT 5 cut(s) 19, 533, 922, 1130, 1253
AluI AGCT 5 cut(s) 19, 533, 922, 1130, 1253
Alw21I GWGCWC 2 cut(s) 91, 1006
Alw26I GTCTC 2 cut(s) 975, 1461
AlwI GGATC 5 cut(s) 41, 293, 306, 956, 1201
AoxI GGCC 3 cut(s) 197, 1231, 1315
ApeKI GCWGC 3 cut(s) 154, 650, 1073
ApoI RAATTY 7 cut(s) 172, 410, 663, 748, 847, 1042, 1329
AspLEI GCGC 1 cut(s) 1415
AspS9I GGNCC 4 cut(s) 392, 705, 804, 1525
AsuHPI GGTGA 4 cut(s) 244, 872, 1402, 1451
AvaII GGWCC 4 cut(s) 392, 705, 804, 1525
BalI TGGCCA 2 cut(s) 199, 1317
BamHI GGATCC 1 cut(s) 298
BanI GGYRCC 1 cut(s) 251
BbsI GAAGAC 3 cut(s) 214, 677, 1069
Bbv12I GWGCWC 2 cut(s) 91, 1006
BbvI GCAGC 3 cut(s) 166, 662, 1085
BccI CCATC 2 cut(s) 242, 599
BciT130I CCWGG 4 cut(s) 1103, 1170, 1437, 1522
BciVI GTATCC 1 cut(s) 1315
BcoDI GTCTC 2 cut(s) 975, 1461
BfaI CTAG 1 cut(s) 618
BfmI CTRYAG 1 cut(s) 1137
BfuAI ACCTGC 2 cut(s) 941, 1059
BfuI GTATCC 1 cut(s) 1315
BisI GCNGC 3 cut(s) 155, 651, 1074
BlsI GCNGC 3 cut(s) 156, 652, 1075
Bme1390I CCNGG 4 cut(s) 1103, 1170, 1437, 1522
Bme18I GGWCC 4 cut(s) 392, 705, 804, 1525
BmeRI GACNNNNNGTC 1 cut(s) 1453
BmgBI CACGTC 1 cut(s) 1342
BmgT120I GGNCC 4 cut(s) 392, 705, 804, 1525
BmiI GGNNCC 6 cut(s) 253, 300, 1100, 1167, 1526, 1527
BmrFI CCNGG 4 cut(s) 1103, 1170, 1437, 1522
BmsI GCATC 4 cut(s) 64, 225, 727, 826
BoxI GACNNNNGTC 2 cut(s) 710, 809
BpiI GAAGAC 3 cut(s) 214, 677, 1069
Bpu10I CCTNAGC 1 cut(s) 918
BpuEI CTTGAG 1 cut(s) 558
BsaJI CCNNGG 5 cut(s) 294, 474, 1385, 1520, 1521
BsaWI WCCGGW 2 cut(s) 718, 817
Bsc4I CCNNNNNNNGG 2 cut(s) 295, 1190
Bse118I RCCGGY 1 cut(s) 538
Bse3DI GCAATG 1 cut(s) 1318
BseBI CCWGG 4 cut(s) 1103, 1170, 1437, 1522
BseDI CCNNGG 5 cut(s) 294, 474, 1385, 1520, 1521
BseGI GGATG 3 cut(s) 55, 470, 1145
BseLI CCNNNNNNNGG 2 cut(s) 295, 1190
BseMI GCAATG 1 cut(s) 1318
BseMII CTCAG 2 cut(s) 354, 772
BseRI GAGGAG 1 cut(s) 1301
BseXI GCAGC 3 cut(s) 166, 662, 1085
BseYI CCCAGC 1 cut(s) 1126
BsgI GTGCAG 2 cut(s) 173, 1314
BshFI GGCC 3 cut(s) 199, 1233, 1317
BshNI GGYRCC 1 cut(s) 251
BsiHKAI GWGCWC 2 cut(s) 91, 1006
BsiSI CCGG 3 cut(s) 539, 719, 818
BslFI GGGAC 2 cut(s) 148, 322
BslI CCNNNNNNNGG 2 cut(s) 295, 1190
BsmAI GTCTC 2 cut(s) 975, 1461
BsmFI GGGAC 2 cut(s) 148, 322
BsnI GGCC 3 cut(s) 199, 1233, 1317
Bsp1286I GDGCHC 2 cut(s) 91, 1006
Bsp1407I TGTACA 1 cut(s) 448
Bsp143I GATC 6 cut(s) 46, 216, 298, 511, 961, 1193
Bsp19I CCATGG 2 cut(s) 294, 474
BspACI CCGC 2 cut(s) 132, 677
BspANI GGCC 3 cut(s) 199, 1233, 1317
BspCNI CTCAG 2 cut(s) 355, 771
BspLI GGNNCC 6 cut(s) 253, 300, 1100, 1167, 1526, 1527
BspMAI CTGCAG 1 cut(s) 1141
BspMI ACCTGC 2 cut(s) 941, 1059
BspPI GGATC 5 cut(s) 41, 293, 306, 956, 1201
BspT107I GGYRCC 1 cut(s) 251
BsrBI CCGCTC 1 cut(s) 132
BsrDI GCAATG 1 cut(s) 1318
BsrFI RCCGGY 1 cut(s) 538
BsrGI TGTACA 1 cut(s) 448
BssAI RCCGGY 1 cut(s) 538
BssECI CCNNGG 5 cut(s) 294, 474, 1385, 1520, 1521
BssMI GATC 6 cut(s) 46, 216, 298, 511, 961, 1193
BssT1I CCWWGG 3 cut(s) 294, 474, 1385
Bst2UI CCWGG 4 cut(s) 1103, 1170, 1437, 1522
Bst4CI ACNGT 6 cut(s) 595, 712, 811, 941, 946, 1301
Bst6I CTCTTC 1 cut(s) 1388
BstAUI TGTACA 1 cut(s) 448
BstC8I GCNNGC 2 cut(s) 421, 1293
BstDEI CTNAG 3 cut(s) 363, 758, 918
BstDSI CCRYGG 2 cut(s) 294, 474
BstF5I GGATG 3 cut(s) 55, 470, 1145
BstHHI GCGC 1 cut(s) 1415
BstKTI GATC 6 cut(s) 49, 219, 301, 514, 964, 1196
BstMAI GTCTC 2 cut(s) 975, 1461
BstMBI GATC 6 cut(s) 46, 216, 298, 511, 961, 1193
BstMWI GCNNNNNNNGC 4 cut(s) 575, 1082, 1091, 1136
BstNI CCWGG 4 cut(s) 1103, 1170, 1437, 1522
BstNSI RCATGY 2 cut(s) 39, 87
BstPAI GACNNNNGTC 2 cut(s) 710, 809
BstSCI CCNGG 4 cut(s) 1101, 1168, 1435, 1520
BstSFI CTRYAG 1 cut(s) 1137
BstV1I GCAGC 3 cut(s) 166, 662, 1085
BstV2I GAAGAC 3 cut(s) 214, 677, 1069
BstX2I RGATCY 3 cut(s) 46, 298, 961
BstYI RGATCY 3 cut(s) 46, 298, 961
BsuI GTATCC 1 cut(s) 1315
BsuRI GGCC 3 cut(s) 199, 1233, 1317
BtgI CCRYGG 2 cut(s) 294, 474
BtrI CACGTC 1 cut(s) 1342
BtsCI GGATG 3 cut(s) 55, 470, 1145
BtsI GCAGTG 2 cut(s) 156, 1195
BtsIMutI CAGTG 6 cut(s) 156, 591, 766, 890, 1085, 1195
BveI ACCTGC 2 cut(s) 941, 1059
Cac8I GCNNGC 2 cut(s) 421, 1293
CfoI GCGC 1 cut(s) 1415
Cfr10I RCCGGY 1 cut(s) 538
Cfr13I GGNCC 4 cut(s) 392, 705, 804, 1525
CseI GACGC 2 cut(s) 145, 477
Csp6I GTAC 3 cut(s) 449, 942, 1352
CspCI CAANNNNNGTGG 2 cut(s) 59, 94
CviAII CATG 5 cut(s) 36, 84, 285, 295, 475
CviQI GTAC 3 cut(s) 449, 942, 1352
DdeI CTNAG 3 cut(s) 363, 758, 918
DpnI GATC 6 cut(s) 48, 218, 300, 513, 963, 1195
DpnII GATC 6 cut(s) 46, 216, 298, 511, 961, 1193
DriI GACNNNNNGTC 1 cut(s) 1453
EaeI YGGCCR 2 cut(s) 197, 1315
Eam1104I CTCTTC 1 cut(s) 1388
Eam1105I GACNNNNNGTC 1 cut(s) 1453
EarI CTCTTC 1 cut(s) 1388
Eco130I CCWWGG 3 cut(s) 294, 474, 1385
Eco32I GATATC 1 cut(s) 526
Eco47I GGWCC 4 cut(s) 392, 705, 804, 1525
Eco57I CTGAAG 2 cut(s) 417, 689
EcoO109I RGGNCCY 1 cut(s) 1525
EcoRI GAATTC 3 cut(s) 748, 847, 1042
EcoRII CCWGG 4 cut(s) 1101, 1168, 1435, 1520
EcoRV GATATC 1 cut(s) 526
EcoT14I CCWWGG 3 cut(s) 294, 474, 1385
ErhI CCWWGG 3 cut(s) 294, 474, 1385
FaeI CATG 5 cut(s) 39, 87, 288, 298, 478
FaqI GGGAC 2 cut(s) 148, 322
FatI CATG 5 cut(s) 35, 83, 284, 294, 474
FauI CCCGC 1 cut(s) 125
FauNDI CATATG 1 cut(s) 1078
Fnu4HI GCNGC 3 cut(s) 155, 651, 1074
FokI GGATG 3 cut(s) 42, 457, 1132
Fsp4HI GCNGC 3 cut(s) 155, 651, 1074
FspBI CTAG 1 cut(s) 618
FspI TGCGCA 1 cut(s) 1414
GlaI GCGC 1 cut(s) 1414
GluI GCNGC 3 cut(s) 155, 651, 1074
GsaI CCCAGC 1 cut(s) 1130
HaeIII GGCC 3 cut(s) 199, 1233, 1317
HapII CCGG 3 cut(s) 539, 719, 818
HgaI GACGC 2 cut(s) 145, 477
HhaI GCGC 1 cut(s) 1415
Hin1II CATG 5 cut(s) 39, 87, 288, 298, 478
Hin6I GCGC 1 cut(s) 1413
HinP1I GCGC 1 cut(s) 1413
HincII GTYRAC 2 cut(s) 429, 1361
HindII GTYRAC 2 cut(s) 429, 1361
HinfI GANTC 5 cut(s) 335, 673, 690, 789, 968
HpaII CCGG 3 cut(s) 539, 719, 818
HphI GGTGA 4 cut(s) 244, 872, 1402, 1451
Hpy166II GTNNAC 6 cut(s) 81, 429, 705, 804, 996, 1361
Hpy188I TCNGA 3 cut(s) 364, 669, 1185
Hpy188III TCNNGA 6 cut(s) 50, 694, 793, 965, 985, 1345
Hpy8I GTNNAC 6 cut(s) 81, 429, 705, 804, 996, 1361
Hpy99I CGWCG 1 cut(s) 1346
HpyAV CCTTC 5 cut(s) 392, 550, 691, 790, 1342
HpyCH4III ACNGT 6 cut(s) 595, 712, 811, 941, 946, 1301
HpyCH4IV ACGT 1 cut(s) 1341
HpyF10VI GCNNNNNNNGC 4 cut(s) 575, 1082, 1091, 1136
HpyF3I CTNAG 3 cut(s) 363, 758, 918
HpySE526I ACGT 1 cut(s) 1341
Hsp92II CATG 5 cut(s) 39, 87, 288, 298, 478
HspAI GCGC 1 cut(s) 1413
KflI GGGWCCC 1 cut(s) 1525
Kzo9I GATC 6 cut(s) 46, 216, 298, 511, 961, 1193
LmnI GCTCC 5 cut(s) 129, 144, 1165, 1258, 1288
Lsp1109I GCAGC 3 cut(s) 166, 662, 1085
LweI GCATC 4 cut(s) 64, 225, 727, 826
MaeI CTAG 1 cut(s) 618
MaeII ACGT 1 cut(s) 1341
MaeIII GTNAC 1 cut(s) 1015
MalI GATC 6 cut(s) 48, 218, 300, 513, 963, 1195
MbiI CCGCTC 1 cut(s) 132
MboI GATC 6 cut(s) 46, 216, 298, 511, 961, 1193
MboII GAAGA 9 cut(s) 56, 214, 606, 614, 634, 682, 971, 1074, 1405
MflI RGATCY 3 cut(s) 46, 298, 961
MhlI GDGCHC 2 cut(s) 91, 1006
MlsI TGGCCA 2 cut(s) 199, 1317
MluNI TGGCCA 2 cut(s) 199, 1317
MlyI GAGTC 5 cut(s) 344, 667, 699, 798, 977
MmeI TCCRAC 1 cut(s) 10
Mox20I TGGCCA 2 cut(s) 199, 1317
MscI TGGCCA 2 cut(s) 199, 1317
MseI TTAA 1 cut(s) 500
MslI CAYNNNNRTG 2 cut(s) 246, 1464
Msp20I TGGCCA 2 cut(s) 199, 1317
MspI CCGG 3 cut(s) 539, 719, 818
MspR9I CCNGG 4 cut(s) 1103, 1170, 1437, 1522
MvaI CCWGG 4 cut(s) 1103, 1170, 1437, 1522
MwoI GCNNNNNNNGC 4 cut(s) 575, 1082, 1091, 1136
NcoI CCATGG 2 cut(s) 294, 474
NdeI CATATG 1 cut(s) 1078
NdeII GATC 6 cut(s) 46, 216, 298, 511, 961, 1193
NlaIII CATG 5 cut(s) 39, 87, 288, 298, 478
NlaIV GGNNCC 6 cut(s) 253, 300, 1100, 1167, 1526, 1527
NsbI TGCGCA 1 cut(s) 1414
NspI RCATGY 2 cut(s) 39, 87
PaqCI CACCTGC 1 cut(s) 1059
PasI CCCWGGG 1 cut(s) 1521
PciI ACATGT 2 cut(s) 35, 83
PkrI GCNGC 3 cut(s) 156, 652, 1075
PleI GAGTC 5 cut(s) 343, 667, 698, 797, 976
PpsI GAGTC 5 cut(s) 343, 667, 698, 797, 976
PpuMI RGGWCCY 1 cut(s) 1525
PscI ACATGT 2 cut(s) 35, 83
PshAI GACNNNNGTC 2 cut(s) 710, 809
Psp5II RGGWCCY 1 cut(s) 1525
Psp6I CCWGG 4 cut(s) 1101, 1168, 1435, 1520
PspFI CCCAGC 1 cut(s) 1126
PspGI CCWGG 4 cut(s) 1101, 1168, 1435, 1520
PspN4I GGNNCC 6 cut(s) 253, 300, 1100, 1167, 1526, 1527
PspPI GGNCC 4 cut(s) 392, 705, 804, 1525
PspPPI RGGWCCY 1 cut(s) 1525
PstI CTGCAG 1 cut(s) 1141
PsuI RGATCY 3 cut(s) 46, 298, 961
RsaI GTAC 3 cut(s) 450, 943, 1353
RsaNI GTAC 3 cut(s) 449, 942, 1352
RseI CAYNNNNRTG 2 cut(s) 246, 1464
SaqAI TTAA 1 cut(s) 500
SatI GCNGC 3 cut(s) 155, 651, 1074
Sau3AI GATC 6 cut(s) 46, 216, 298, 511, 961, 1193
Sau96I GGNCC 4 cut(s) 392, 705, 804, 1525
SchI GAGTC 5 cut(s) 344, 667, 699, 798, 977
ScrFI CCNGG 4 cut(s) 1103, 1170, 1437, 1522
SduI GDGCHC 2 cut(s) 91, 1006
SfaNI GCATC 4 cut(s) 64, 225, 727, 826
SfcI CTRYAG 1 cut(s) 1137
SinI GGWCC 4 cut(s) 392, 705, 804, 1525
SmiMI CAYNNNNRTG 2 cut(s) 246, 1464
SmlI CTYRAG 1 cut(s) 573
SmoI CTYRAG 1 cut(s) 573
SsiI CCGC 2 cut(s) 132, 677
SspMI CTAG 1 cut(s) 618
StyD4I CCNGG 4 cut(s) 1101, 1168, 1435, 1520
StyI CCWWGG 3 cut(s) 294, 474, 1385
TaaI ACNGT 6 cut(s) 595, 712, 811, 941, 946, 1301
TaiI ACGT 1 cut(s) 1344
TaqI TCGA 3 cut(s) 514, 642, 1344
TatI WGTACW 1 cut(s) 448
Tru1I TTAA 1 cut(s) 500
Tru9I TTAA 1 cut(s) 500
TscAI CASTG 6 cut(s) 156, 598, 766, 897, 1092, 1195
TseI GCWGC 3 cut(s) 154, 650, 1073
TspDTI ATGAA 7 cut(s) 27, 96, 459, 498, 615, 641, 645
TspRI CASTG 6 cut(s) 156, 598, 766, 897, 1092, 1195
VpaK11BI GGWCC 4 cut(s) 392, 705, 804, 1525
XapI RAATTY 7 cut(s) 172, 410, 663, 748, 847, 1042, 1329
XceI RCATGY 2 cut(s) 39, 87
XspI CTAG 1 cut(s) 618
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.