Zinc knuckle
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AbsI | CCTCGAGG | 1 cut(s) | 222 |
| AcsI | RAATTY | 1 cut(s) | 184 |
| AfaI | GTAC | 2 cut(s) | 85, 273 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 368 |
| AflIII | ACRYGT | 1 cut(s) | 280 |
| AgsI | TTSAA | 3 cut(s) | 175, 268, 308 |
| AluBI | AGCT | 3 cut(s) | 167, 241, 254 |
| AluI | AGCT | 3 cut(s) | 167, 241, 254 |
| Alw26I | GTCTC | 2 cut(s) | 282, 312 |
| Ama87I | CYCGRG | 2 cut(s) | 222, 391 |
| ApeKI | GCWGC | 1 cut(s) | 167 |
| ApoI | RAATTY | 1 cut(s) | 184 |
| AspS9I | GGNCC | 1 cut(s) | 260 |
| AsuHPI | GGTGA | 1 cut(s) | 49 |
| AvaI | CYCGRG | 2 cut(s) | 222, 391 |
| AvaII | GGWCC | 1 cut(s) | 260 |
| BauI | CACGAG | 1 cut(s) | 249 |
| BbsI | GAAGAC | 1 cut(s) | 51 |
| BbvI | GCAGC | 1 cut(s) | 154 |
| BccI | CCATC | 1 cut(s) | 251 |
| BcoDI | GTCTC | 2 cut(s) | 282, 312 |
| BisI | GCNGC | 1 cut(s) | 168 |
| BlsI | GCNGC | 1 cut(s) | 169 |
| Bme18I | GGWCC | 1 cut(s) | 260 |
| BmeT110I | CYCGRG | 2 cut(s) | 222, 391 |
| BmgT120I | GGNCC | 1 cut(s) | 260 |
| BmiI | GGNNCC | 1 cut(s) | 218 |
| BpiI | GAAGAC | 1 cut(s) | 51 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 368 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 368 |
| BseXI | GCAGC | 1 cut(s) | 154 |
| BsiHKCI | CYCGRG | 2 cut(s) | 222, 391 |
| BslFI | GGGAC | 1 cut(s) | 409 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 368 |
| BsmAI | GTCTC | 2 cut(s) | 282, 312 |
| BsmFI | GGGAC | 1 cut(s) | 409 |
| BsoBI | CYCGRG | 2 cut(s) | 222, 391 |
| BspLI | GGNNCC | 1 cut(s) | 218 |
| BssSI | CACGAG | 1 cut(s) | 249 |
| Bst2BI | CACGAG | 1 cut(s) | 249 |
| Bst6I | CTCTTC | 1 cut(s) | 378 |
| BstC8I | GCNNGC | 4 cut(s) | 144, 165, 230, 352 |
| BstMAI | GTCTC | 2 cut(s) | 282, 312 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 160, 238 |
| BstV1I | GCAGC | 1 cut(s) | 154 |
| BstV2I | GAAGAC | 1 cut(s) | 51 |
| Cac8I | GCNNGC | 4 cut(s) | 144, 165, 230, 352 |
| Cfr13I | GGNCC | 1 cut(s) | 260 |
| Csp6I | GTAC | 2 cut(s) | 84, 272 |
| CviAII | CATG | 3 cut(s) | 34, 92, 368 |
| CviJI | RGCY | 7 cut(s) | 55, 146, 163, 167, 241, 254, 354 |
| CviKI_1 | RGCY | 7 cut(s) | 55, 146, 163, 167, 241, 254, 354 |
| CviQI | GTAC | 2 cut(s) | 84, 272 |
| Eam1104I | CTCTTC | 1 cut(s) | 378 |
| EarI | CTCTTC | 1 cut(s) | 378 |
| Eco47I | GGWCC | 1 cut(s) | 260 |
| Eco88I | CYCGRG | 2 cut(s) | 222, 391 |
| FaeI | CATG | 3 cut(s) | 37, 95, 371 |
| FaiI | YATR | 9 cut(s) | 35, 75, 93, 234, 324, 369, 408, 421, 423 |
| FaqI | GGGAC | 1 cut(s) | 409 |
| FatI | CATG | 3 cut(s) | 33, 91, 367 |
| Fnu4HI | GCNGC | 1 cut(s) | 168 |
| Fsp4HI | GCNGC | 1 cut(s) | 168 |
| GluI | GCNGC | 1 cut(s) | 168 |
| Hin1II | CATG | 3 cut(s) | 37, 95, 371 |
| HinfI | GANTC | 2 cut(s) | 10, 431 |
| HphI | GGTGA | 1 cut(s) | 49 |
| Hpy166II | GTNNAC | 1 cut(s) | 84 |
| Hpy188I | TCNGA | 1 cut(s) | 60 |
| Hpy188III | TCNNGA | 3 cut(s) | 14, 104, 435 |
| Hpy8I | GTNNAC | 1 cut(s) | 84 |
| HpyAV | CCTTC | 3 cut(s) | 173, 207, 349 |
| HpyCH4IV | ACGT | 2 cut(s) | 109, 280 |
| HpyCH4V | TGCA | 3 cut(s) | 350, 375, 410 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 160, 238 |
| HpySE526I | ACGT | 2 cut(s) | 109, 280 |
| Hsp92II | CATG | 3 cut(s) | 37, 95, 371 |
| LpnPI | CCDG | 3 cut(s) | 142, 177, 420 |
| Lsp1109I | GCAGC | 1 cut(s) | 154 |
| MaeII | ACGT | 2 cut(s) | 109, 280 |
| MboII | GAAGA | 3 cut(s) | 56, 194, 395 |
| MfeI | CAATTG | 1 cut(s) | 49 |
| MluCI | AATT | 3 cut(s) | 25, 49, 184 |
| MnlI | CCTC | 2 cut(s) | 218, 231 |
| MseI | TTAA | 1 cut(s) | 117 |
| MspA1I | CMGCKG | 1 cut(s) | 167 |
| MunI | CAATTG | 1 cut(s) | 49 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 160, 238 |
| NlaIII | CATG | 3 cut(s) | 37, 95, 371 |
| NlaIV | GGNNCC | 1 cut(s) | 218 |
| PaeR7I | CTCGAG | 1 cut(s) | 222 |
| PfeI | GAWTC | 2 cut(s) | 10, 431 |
| PkrI | GCNGC | 1 cut(s) | 169 |
| PspN4I | GGNNCC | 1 cut(s) | 218 |
| PspPI | GGNCC | 1 cut(s) | 260 |
| PspXI | VCTCGAGB | 1 cut(s) | 222 |
| PvuII | CAGCTG | 1 cut(s) | 167 |
| RsaI | GTAC | 2 cut(s) | 85, 273 |
| RsaNI | GTAC | 2 cut(s) | 84, 272 |
| SaqAI | TTAA | 1 cut(s) | 117 |
| SatI | GCNGC | 1 cut(s) | 168 |
| Sau96I | GGNCC | 1 cut(s) | 260 |
| SetI | ASST | 9 cut(s) | 102, 112, 169, 218, 243, 256, 273, 283, 341 |
| Sfr274I | CTCGAG | 1 cut(s) | 222 |
| SinI | GGWCC | 1 cut(s) | 260 |
| SlaI | CTCGAG | 1 cut(s) | 222 |
| SmlI | CTYRAG | 1 cut(s) | 222 |
| SmoI | CTYRAG | 1 cut(s) | 222 |
| Sse9I | AATT | 3 cut(s) | 25, 49, 184 |
| TaiI | ACGT | 2 cut(s) | 112, 283 |
| TaqI | TCGA | 2 cut(s) | 223, 342 |
| TasI | AATT | 3 cut(s) | 25, 49, 184 |
| TatI | WGTACW | 1 cut(s) | 83 |
| TfiI | GAWTC | 2 cut(s) | 10, 431 |
| Tru1I | TTAA | 1 cut(s) | 117 |
| Tru9I | TTAA | 1 cut(s) | 117 |
| TseI | GCWGC | 1 cut(s) | 167 |
| TspDTI | ATGAA | 4 cut(s) | 22, 62, 188, 396 |
| TspGWI | ACGGA | 1 cut(s) | 428 |
| VpaK11BI | GGWCC | 1 cut(s) | 260 |
| XapI | RAATTY | 1 cut(s) | 184 |
| XhoI | CTCGAG | 1 cut(s) | 222 |