RchiOBHm_Chr6g0270081

HVA22-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000440
Physical Location & Seq
Reverse (-)
27774280 .. 27778870
4591 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ24229

Sequence Viewer

Length: 1548 bp
ATGGGCTTGCTGGGTCTCGTTGGATTTGCGTTCCAACGCTTTCATGTTCTTGCATGGCCTCTCTTTGCTCTGGTCTATCCTCTGTGTTCTTCCATTAAAGCAATCGAGACAAATTCCATTACAGATACTCACAAGATAAATACGTATTGGGTCGTCTTCTCATTGATCTTGCTATTTGAAAATGCTTTTATGAAGCTCCTTGAATGGTTCCTGCTCTGGCCATACATTAGGCTACTGATTGTCTTCTTTTTGGTGATGCCACATTTTGATGGCGCCTTATATGTCTATAAACACCTTATCTGTCCATGCCTCTCCTTGGATCCCCAAATTGTTATCAACTTGTTCAACAAGCGGAAGGAGTCCCTTGCGAGAGATAACTTTCTCTCTGAGGTTGAGAGATATGTCAAGGAGAATGGACCTGAAGGTTTGGAAAAATTTATTGCTTGCAAGTCAACAAGGACAAATCTCAATGTAAAAGAGTTCAATGCAGTTTCATCCATGGATAATGAAGCGTCAAAATCCATAAAGCCAAATGGTGGACAGAATGATATCAAAGCTGTGCAGGTAATGGTGAAAAAGAAGGAAACAACTGCTAGCCAAGTTAGTCAGGCAGAGCCTAATCTCACTGTGAATGAAGATAAATTTTCTTCTAGGAAGATGAATGAAAAAGCGATTGGGGCTGCAGCCGACAGAGAAATTCTGAATACTCCACCTCCAAAGAAAGTCCAGAAGGAGTGGACCACAGTCAGTCCGCTACCAACTCAAACTGATGCAACTTTTAATTCCCCTCTCGGTGATAATAAACACAAGGCTACATACGAGGCCTTGAAGATAAAGAATGAGGCAGAGCCGAAGCTCACTTGGCCTGAAAGCAGTACTGTTGCAGCCATGGAAATATATGAAAAGCCGGTTGAGGTTGGAACAGTTATAGAAGATCCCGAGCCTCCTAAAGAAGTCCAGAAAGAGTGGACTTGTGCTCTCTGTCAGGTAGCTACTGCATGTGAAAGAAATATGAATTCCCACCTGCAAGGGAGAAAACACAAGGCAGCATATGAGGCACTGAAAGCAGGGAATCAGGCATTTGTGCCCAAGATTGCCCCAGCTTCAACTGCAAAAACATCCAATCAACCAAATAAAGAGCCTGGAAAGAGTATTCCGAGCAGTGGATCAGAACAAAAAGTTACTGTAAATGAAAATGTGCAAGGCCAGAAAAATAGTAGTCCACCTCCAATCACAAAGAAGCACTATAAACCGAAAGAGCAGCTAGCAGATGGTGTATCCAGCAATGGCCAGAAAGGGAAAATTGCTATACACATCGAGAAGGTACAAAGTCAACAACCAAAGCCAAATGAAGTTCCAAGGGTGAAGAGTTCTCCTATGCGGTGCAAAATTTGTGGCGTATGCTGTTCTGATGAGATTGACTTGCTGTCTCATCTTAACGGAAAAAAACACCAGGAAAATGTGCAAGAGTACCTAATCAGGGAATGGATGAAAAAGCCCAGGGGCCTTTGTGATACCGAAACTGGTGAGTTTGACATTTACTGGTGA

Protein Analysis

515

Amino Acids

57.86

Weight (kDa)

8.77

Isoelectric Point (pI)

33.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TB2_DP1_HVA22 PF03134 27 - 103 1.7e-18 TB2/DP1, HVA22 family
zf-met PF12874 323 - 347 7.4e-07 Zinc-finger of C2H2 type
zf-met PF12874 461 - 484 4.5e-06 Zinc-finger of C2H2 type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000440)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20313 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_5g25851
prunus_persica Prupe.8G072900_v2.0.a1 Prupe.8G072900_v2.0.a1 Prupe.8G072900_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1
pyrus_communis pycom01g01210 pycom02g12000 pycom10g21410 pycom11g11060 pycom13g24280
rosa_chinensis RchiOBHm_Chr3g0461871 RchiOBHm_Chr4g0427221 RchiOBHm_Chr4g0427231 RchiOBHm_Chr6g0270081 RchiOBHm_Chr6g0270121 RchiOBHm_Chr6g0270151 RchiOBHm_Chr6g0270161 RchiOBHm_Chr6g0270171 RchiOBHm_Chr6g0270181 RchiOBHm_Chr6g0270191 RchiOBHm_Chr7g0229301
rosa_laevigata RLG00000013809 RLG00000013810 RLG00000013812 RLG00000013814 RLG00000013817 RLG00000013818
rosa_multiflora Rmu_sc0000918.1_g000004 Rmu_sc0000918.1_g000019 Rmu_sc0000918.1_g000027 Rmu_sc0002817.1_g000013 Rmu_sc0004366.1_g000009 Rmu_sc0004376.1_g000011 Rmu_sc0004376.1_g000014 Rmu_sc0004376.1_g000021 Rmu_sc0006909.1_g000002 Rmu_sc0011356.1_g000003 Rmu_sc0011369.1_g000005 Rmu_sc0017552.1_g000001
rosa_roxburghii Rroxscaffold_5G00354200 Rroxscaffold_7G00198080 Rroxscaffold_7G00198090 Rroxscaffold_7G00198100 Rroxscaffold_7G00198130 Rroxscaffold_7G00198170
rosa_rugosa Rorug06G0052400 Rorug06G0052500 Rorug06G0053000
rosa_samantha Rh6AG171300 Rh6AG171400 Rh6AG171800 Rh6AG171900 Rh6AG172000 Rh6AG172100 Rh6AG369700 Rh6BG175800 Rh6BG175900 Rh6BG176200 Rh6BG176300 Rh6CG170900 Rh6CG171100 Rh6CG171400 Rh6CG171500 Rh6CG171700 Rh6CG171900 Rh6CG172000 Rh6CG172100
rosa_wichuraiana Rw6G014730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1032
Acc36I ACCTGC 2 cut(s) 553, 1032
AccB1I GGYRCC 1 cut(s) 272
AccB7I CCANNNNNTGG 1 cut(s) 536
AciI CCGC 3 cut(s) 352, 752, 1381
AclWI GGATC 4 cut(s) 314, 327, 929, 1174
AcoI YGGCCR 2 cut(s) 218, 1288
AcsI RAATTY 6 cut(s) 112, 434, 641, 696, 1015, 1389
AcuI CTGAAG 1 cut(s) 441
AcyI GRCGYC 1 cut(s) 273
AfaI GTAC 3 cut(s) 877, 1326, 1472
AfiI CCNNNNNNNGG 4 cut(s) 316, 536, 1163, 1480
AgsI TTSAA 6 cut(s) 179, 203, 346, 484, 829, 1107
AhdI GACNNNNNGTC 1 cut(s) 1426
AjnI CCWGG 3 cut(s) 1141, 1452, 1499
AjuI GAANNNNNNNTTGG 2 cut(s) 657, 689
AluBI AGCT 6 cut(s) 196, 557, 856, 992, 1103, 1264
AluI AGCT 6 cut(s) 196, 557, 856, 992, 1103, 1264
Alw21I GWGCWC 1 cut(s) 979
Alw26I GTCTC 3 cut(s) 20, 101, 1434
AlwI GGATC 4 cut(s) 314, 327, 929, 1174
Ama87I CYCGRG 1 cut(s) 938
AoxI GGCC 7 cut(s) 56, 218, 822, 863, 1204, 1288, 1504
ApeKI GCWGC 5 cut(s) 680, 683, 884, 1046, 1261
ApoI RAATTY 6 cut(s) 112, 434, 641, 696, 1015, 1389
AspLEI GCGC 1 cut(s) 275
AspS9I GGNCC 3 cut(s) 416, 738, 1504
AsuHPI GGTGA 5 cut(s) 265, 583, 806, 1375, 1538
AsuNHI GCTAGC 2 cut(s) 593, 1264
AvaI CYCGRG 1 cut(s) 938
AvaII GGWCC 2 cut(s) 416, 738
BaeGI GKGCMC 1 cut(s) 1089
BalI TGGCCA 2 cut(s) 220, 1290
BamHI GGATCC 1 cut(s) 319
BanI GGYRCC 1 cut(s) 272
BbsI GAAGAC 2 cut(s) 148, 235
Bbv12I GWGCWC 1 cut(s) 979
BbvI GCAGC 5 cut(s) 667, 695, 896, 1058, 1273
BccI CCATC 2 cut(s) 263, 1265
BciT130I CCWGG 3 cut(s) 1143, 1454, 1501
BciVI GTATCC 1 cut(s) 1288
BcoDI GTCTC 3 cut(s) 20, 101, 1434
BfaI CTAG 3 cut(s) 594, 651, 1265
BfmI CTRYAG 1 cut(s) 681
BfoI RGCGCY 1 cut(s) 276
BfuAI ACCTGC 2 cut(s) 553, 1032
BfuI GTATCC 1 cut(s) 1288
BisI GCNGC 5 cut(s) 681, 684, 885, 1047, 1262
BlsI GCNGC 5 cut(s) 682, 685, 886, 1048, 1263
BmcAI AGTACT 1 cut(s) 877
Bme1390I CCNGG 3 cut(s) 1143, 1454, 1501
Bme18I GGWCC 2 cut(s) 416, 738
BmeRI GACNNNNNGTC 1 cut(s) 1426
BmeT110I CYCGRG 1 cut(s) 938
BmgT120I GGNCC 3 cut(s) 416, 738, 1504
BmiI GGNNCC 4 cut(s) 209, 274, 321, 1505
BmrFI CCNGG 3 cut(s) 1143, 1454, 1501
BmsI GCATC 2 cut(s) 246, 760
BmtI GCTAGC 2 cut(s) 597, 1268
BoxI GACNNNNGTC 1 cut(s) 743
BpiI GAAGAC 2 cut(s) 148, 235
BsaAI YACGTR 1 cut(s) 144
BsaHI GRCGYC 1 cut(s) 273
BsaI GGTCTC 1 cut(s) 20
BsaJI CCNNGG 6 cut(s) 315, 498, 888, 1358, 1499, 1500
BsaXI ACNNNNNCTCC 2 cut(s) 697, 727
Bsc4I CCNNNNNNNGG 4 cut(s) 316, 536, 1163, 1480
Bse118I RCCGGY 1 cut(s) 907
Bse1I ACTGG 2 cut(s) 1528, 1547
Bse3DI GCAATG 1 cut(s) 1291
BseBI CCWGG 3 cut(s) 1143, 1454, 1501
BseDI CCNNGG 6 cut(s) 315, 498, 888, 1358, 1499, 1500
BseGI GGATG 3 cut(s) 494, 1118, 1494
BseLI CCNNNNNNNGG 4 cut(s) 316, 536, 1163, 1480
BseMI GCAATG 1 cut(s) 1291
BseMII CTCAG 1 cut(s) 378
BseNI ACTGG 2 cut(s) 1528, 1547
BseSI GKGCMC 1 cut(s) 1089
BseXI GCAGC 5 cut(s) 667, 695, 896, 1058, 1273
BseYI CCCAGC 2 cut(s) 10, 1099
BsgI GTGCAG 1 cut(s) 581
BshFI GGCC 7 cut(s) 58, 220, 824, 865, 1206, 1290, 1506
BshNI GGYRCC 1 cut(s) 272
BsiHKAI GWGCWC 1 cut(s) 979
BsiHKCI CYCGRG 1 cut(s) 938
BsiSI CCGG 1 cut(s) 908
BslFI GGGAC 1 cut(s) 346
BslI CCNNNNNNNGG 4 cut(s) 316, 536, 1163, 1480
BsmAI GTCTC 3 cut(s) 20, 101, 1434
BsmFI GGGAC 1 cut(s) 346
BsnI GGCC 7 cut(s) 58, 220, 824, 865, 1206, 1290, 1506
Bso31I GGTCTC 1 cut(s) 20
BsoBI CYCGRG 1 cut(s) 938
Bsp1286I GDGCHC 2 cut(s) 979, 1089
Bsp143I GATC 4 cut(s) 165, 319, 934, 1166
Bsp19I CCATGG 2 cut(s) 498, 888
BspACI CCGC 3 cut(s) 352, 752, 1381
BspANI GGCC 7 cut(s) 58, 220, 824, 865, 1206, 1290, 1506
BspCNI CTCAG 1 cut(s) 379
BspLI GGNNCC 4 cut(s) 209, 274, 321, 1505
BspMAI CTGCAG 1 cut(s) 685
BspMI ACCTGC 2 cut(s) 553, 1032
BspOI GCTAGC 2 cut(s) 597, 1268
BspPI GGATC 4 cut(s) 314, 327, 929, 1174
BspT107I GGYRCC 1 cut(s) 272
BspTNI GGTCTC 1 cut(s) 20
BsrDI GCAATG 1 cut(s) 1291
BsrFI RCCGGY 1 cut(s) 907
BsrI ACTGG 2 cut(s) 1528, 1547
BssAI RCCGGY 1 cut(s) 907
BssECI CCNNGG 6 cut(s) 315, 498, 888, 1358, 1499, 1500
BssMI GATC 4 cut(s) 165, 319, 934, 1166
BssNI GRCGYC 1 cut(s) 273
BssT1I CCWWGG 4 cut(s) 315, 498, 888, 1358
Bst2UI CCWGG 3 cut(s) 1143, 1454, 1501
Bst4CI ACNGT 5 cut(s) 628, 745, 880, 925, 1186
Bst6I CTCTTC 1 cut(s) 1361
BstACI GRCGYC 1 cut(s) 273
BstBAI YACGTR 1 cut(s) 144
BstC8I GCNNGC 4 cut(s) 8, 445, 595, 1266
BstDEI CTNAG 1 cut(s) 387
BstDSI CCRYGG 2 cut(s) 498, 888
BstF5I GGATG 3 cut(s) 494, 1118, 1494
BstH2I RGCGCY 1 cut(s) 276
BstHHI GCGC 1 cut(s) 275
BstKTI GATC 4 cut(s) 168, 322, 937, 1169
BstMAI GTCTC 3 cut(s) 20, 101, 1434
BstMBI GATC 4 cut(s) 165, 319, 934, 1166
BstMWI GCNNNNNNNGC 5 cut(s) 677, 862, 1055, 1064, 1109
BstNI CCWGG 3 cut(s) 1143, 1454, 1501
BstNSI RCATGY 1 cut(s) 1002
BstPAI GACNNNNGTC 1 cut(s) 743
BstSCI CCNGG 3 cut(s) 1141, 1452, 1499
BstSFI CTRYAG 1 cut(s) 681
BstSLI GKGCMC 1 cut(s) 1089
BstSNI TACGTA 1 cut(s) 144
BstV1I GCAGC 5 cut(s) 667, 695, 896, 1058, 1273
BstV2I GAAGAC 2 cut(s) 148, 235
BstX2I RGATCY 2 cut(s) 319, 934
BstYI RGATCY 2 cut(s) 319, 934
BsuI GTATCC 1 cut(s) 1288
BsuRI GGCC 7 cut(s) 58, 220, 824, 865, 1206, 1290, 1506
BtgI CCRYGG 2 cut(s) 498, 888
BtsCI GGATG 3 cut(s) 494, 1118, 1494
BtsI GCAGTG 1 cut(s) 1168
BtsIMutI CAGTG 3 cut(s) 624, 1058, 1168
BveI ACCTGC 2 cut(s) 553, 1032
Cac8I GCNNGC 4 cut(s) 8, 445, 595, 1266
CfoI GCGC 1 cut(s) 275
Cfr10I RCCGGY 1 cut(s) 907
Cfr13I GGNCC 3 cut(s) 416, 738, 1504
CseI GACGC 1 cut(s) 501
Csp6I GTAC 3 cut(s) 876, 1325, 1471
CspCI CAANNNNNGTGG 2 cut(s) 1375, 1410
CviAII CATG 6 cut(s) 44, 54, 306, 499, 889, 999
CviQI GTAC 3 cut(s) 876, 1325, 1471
DdeI CTNAG 1 cut(s) 387
DinI GGCGCC 1 cut(s) 274
DpnI GATC 4 cut(s) 167, 321, 936, 1168
DpnII GATC 4 cut(s) 165, 319, 934, 1166
DriI GACNNNNNGTC 1 cut(s) 1426
EaeI YGGCCR 2 cut(s) 218, 1288
Eam1104I CTCTTC 1 cut(s) 1361
Eam1105I GACNNNNNGTC 1 cut(s) 1426
EarI CTCTTC 1 cut(s) 1361
Eco105I TACGTA 1 cut(s) 144
Eco130I CCWWGG 4 cut(s) 315, 498, 888, 1358
Eco147I AGGCCT 1 cut(s) 824
Eco31I GGTCTC 1 cut(s) 20
Eco32I GATATC 1 cut(s) 550
Eco47I GGWCC 2 cut(s) 416, 738
Eco57I CTGAAG 1 cut(s) 441
Eco88I CYCGRG 1 cut(s) 938
EcoO109I RGGNCCY 1 cut(s) 1504
EcoRI GAATTC 1 cut(s) 1015
EcoRII CCWGG 3 cut(s) 1141, 1452, 1499
EcoRV GATATC 1 cut(s) 550
EcoT14I CCWWGG 4 cut(s) 315, 498, 888, 1358
EgeI GGCGCC 1 cut(s) 274
EheI GGCGCC 1 cut(s) 274
ErhI CCWWGG 4 cut(s) 315, 498, 888, 1358
FaeI CATG 6 cut(s) 47, 57, 309, 502, 892, 1002
FaqI GGGAC 1 cut(s) 346
FatI CATG 6 cut(s) 43, 53, 305, 498, 888, 998
FauNDI CATATG 1 cut(s) 1051
Fnu4HI GCNGC 5 cut(s) 681, 684, 885, 1047, 1262
FokI GGATG 3 cut(s) 481, 1105, 1501
Fsp4HI GCNGC 5 cut(s) 681, 684, 885, 1047, 1262
FspBI CTAG 3 cut(s) 594, 651, 1265
GlaI GCGC 1 cut(s) 274
GluI GCNGC 5 cut(s) 681, 684, 885, 1047, 1262
GsaI CCCAGC 2 cut(s) 14, 1103
HaeII RGCGCY 1 cut(s) 276
HaeIII GGCC 7 cut(s) 58, 220, 824, 865, 1206, 1290, 1506
HapII CCGG 1 cut(s) 908
HgaI GACGC 1 cut(s) 501
HhaI GCGC 1 cut(s) 275
Hin1I GRCGYC 1 cut(s) 273
Hin1II CATG 6 cut(s) 47, 57, 309, 502, 892, 1002
Hin6I GCGC 1 cut(s) 273
HinP1I GCGC 1 cut(s) 273
HincII GTYRAC 2 cut(s) 453, 1334
HindII GTYRAC 2 cut(s) 453, 1334
HinfI GANTC 2 cut(s) 359, 1072
HpaII CCGG 1 cut(s) 908
HphI GGTGA 5 cut(s) 265, 583, 806, 1375, 1538
Hpy166II GTNNAC 6 cut(s) 453, 539, 738, 969, 1223, 1334
Hpy188I TCNGA 5 cut(s) 388, 702, 1158, 1171, 1411
Hpy188III TCNNGA 5 cut(s) 106, 727, 938, 958, 1318
Hpy8I GTNNAC 6 cut(s) 453, 539, 738, 969, 1223, 1334
HpyAV CCTTC 5 cut(s) 349, 416, 574, 724, 1315
HpyCH4III ACNGT 5 cut(s) 628, 745, 880, 925, 1186
HpyCH4IV ACGT 1 cut(s) 143
HpyF10VI GCNNNNNNNGC 5 cut(s) 677, 862, 1055, 1064, 1109
HpyF3I CTNAG 1 cut(s) 387
HpySE526I ACGT 1 cut(s) 143
Hsp92I GRCGYC 1 cut(s) 273
Hsp92II CATG 6 cut(s) 47, 57, 309, 502, 892, 1002
HspAI GCGC 1 cut(s) 273
KasI GGCGCC 1 cut(s) 272
Kzo9I GATC 4 cut(s) 165, 319, 934, 1166
LmnI GCTCC 1 cut(s) 201
Lsp1109I GCAGC 5 cut(s) 667, 695, 896, 1058, 1273
LweI GCATC 2 cut(s) 246, 760
MaeI CTAG 3 cut(s) 594, 651, 1265
MaeII ACGT 1 cut(s) 143
MaeIII GTNAC 1 cut(s) 1180
MalI GATC 4 cut(s) 167, 321, 936, 1168
MboI GATC 4 cut(s) 165, 319, 934, 1166
MboII GAAGA 9 cut(s) 81, 148, 235, 639, 647, 667, 841, 944, 1378
MflI RGATCY 2 cut(s) 319, 934
MhlI GDGCHC 2 cut(s) 979, 1089
MlsI TGGCCA 2 cut(s) 220, 1290
MluCI AATT 9 cut(s) 112, 327, 434, 641, 696, 781, 1015, 1302, 1389
MluNI TGGCCA 2 cut(s) 220, 1290
Mly113I GGCGCC 1 cut(s) 273
MlyI GAGTC 1 cut(s) 368
MmeI TCCRAC 2 cut(s) 58, 898
Mox20I TGGCCA 2 cut(s) 220, 1290
MscI TGGCCA 2 cut(s) 220, 1290
MseI TTAA 3 cut(s) 96, 780, 1437
MslI CAYNNNNRTG 1 cut(s) 267
Msp20I TGGCCA 2 cut(s) 220, 1290
MspI CCGG 1 cut(s) 908
MspR9I CCNGG 3 cut(s) 1143, 1454, 1501
MvaI CCWGG 3 cut(s) 1143, 1454, 1501
MwoI GCNNNNNNNGC 5 cut(s) 677, 862, 1055, 1064, 1109
NarI GGCGCC 1 cut(s) 273
NcoI CCATGG 2 cut(s) 498, 888
NdeI CATATG 1 cut(s) 1051
NdeII GATC 4 cut(s) 165, 319, 934, 1166
NheI GCTAGC 2 cut(s) 593, 1264
NlaIII CATG 6 cut(s) 47, 57, 309, 502, 892, 1002
NlaIV GGNNCC 4 cut(s) 209, 274, 321, 1505
NspI RCATGY 1 cut(s) 1002
PaqCI CACCTGC 1 cut(s) 1032
PasI CCCWGGG 1 cut(s) 1500
PceI AGGCCT 1 cut(s) 824
PfeI GAWTC 1 cut(s) 1072
PflMI CCANNNNNTGG 1 cut(s) 536
PkrI GCNGC 5 cut(s) 682, 685, 886, 1048, 1263
PleI GAGTC 1 cut(s) 367
PluTI GGCGCC 1 cut(s) 276
PpsI GAGTC 1 cut(s) 367
Ppu21I YACGTR 1 cut(s) 144
PshAI GACNNNNGTC 1 cut(s) 743
Psp6I CCWGG 3 cut(s) 1141, 1452, 1499
PspFI CCCAGC 2 cut(s) 10, 1099
PspGI CCWGG 3 cut(s) 1141, 1452, 1499
PspN4I GGNNCC 4 cut(s) 209, 274, 321, 1505
PspPI GGNCC 3 cut(s) 416, 738, 1504
PstI CTGCAG 1 cut(s) 685
PsuI RGATCY 2 cut(s) 319, 934
RsaI GTAC 3 cut(s) 877, 1326, 1472
RsaNI GTAC 3 cut(s) 876, 1325, 1471
RseI CAYNNNNRTG 1 cut(s) 267
SaqAI TTAA 3 cut(s) 96, 780, 1437
SatI GCNGC 5 cut(s) 681, 684, 885, 1047, 1262
Sau3AI GATC 4 cut(s) 165, 319, 934, 1166
Sau96I GGNCC 3 cut(s) 416, 738, 1504
ScaI AGTACT 1 cut(s) 877
SchI GAGTC 1 cut(s) 368
ScrFI CCNGG 3 cut(s) 1143, 1454, 1501
SduI GDGCHC 2 cut(s) 979, 1089
SfaNI GCATC 2 cut(s) 246, 760
SfcI CTRYAG 1 cut(s) 681
SfoI GGCGCC 1 cut(s) 274
SinI GGWCC 2 cut(s) 416, 738
SmiMI CAYNNNNRTG 1 cut(s) 267
SnaBI TACGTA 1 cut(s) 144
Sse9I AATT 9 cut(s) 112, 327, 434, 641, 696, 781, 1015, 1302, 1389
SseBI AGGCCT 1 cut(s) 824
SsiI CCGC 3 cut(s) 352, 752, 1381
SspDI GGCGCC 1 cut(s) 272
SspMI CTAG 3 cut(s) 594, 651, 1265
StuI AGGCCT 1 cut(s) 824
StyD4I CCNGG 3 cut(s) 1141, 1452, 1499
StyI CCWWGG 4 cut(s) 315, 498, 888, 1358
TaaI ACNGT 5 cut(s) 628, 745, 880, 925, 1186
TaiI ACGT 1 cut(s) 146
TaqI TCGA 2 cut(s) 105, 1317
TasI AATT 9 cut(s) 112, 327, 434, 641, 696, 781, 1015, 1302, 1389
TatI WGTACW 1 cut(s) 875
TfiI GAWTC 1 cut(s) 1072
Tru1I TTAA 3 cut(s) 96, 780, 1437
Tru9I TTAA 3 cut(s) 96, 780, 1437
TscAI CASTG 3 cut(s) 631, 1065, 1168
TseI GCWGC 5 cut(s) 680, 683, 884, 1046, 1261
TspGWI ACGGA 1 cut(s) 1455
TspRI CASTG 3 cut(s) 631, 1065, 1168
Van91I CCANNNNNTGG 1 cut(s) 536
VpaK11BI GGWCC 2 cut(s) 416, 738
XapI RAATTY 6 cut(s) 112, 434, 641, 696, 1015, 1389
XceI RCATGY 1 cut(s) 1002
XspI CTAG 3 cut(s) 594, 651, 1265
ZrmI AGTACT 1 cut(s) 877
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.