Rroxscaffold_7G00198100

HVA22-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000440
Physical Location & Seq
Forward (+)
43039275 .. 43042974
3700 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00198100.1

Sequence Viewer

Length: 1473 bp
ATGGGTTTACTGGGTCTTGTTGGATTTGCGCTCCAATGCTTTGATGTTCTTGCATGGCCTCTCTTTGCTCTGGTCTATCCTCTGTATTCTTCCATTAAAGCAATCGAGACAAATTCCATTACAGATACTCACAAGATAAATACGTATTGGGTCGTCTTCTCATTGATCTTGCTATTTGAACATGCTTTTATGAAGCTCCTTGAATGGTTCCTGCTCTGGCCATACATTAGGCTACTGATTGTCTTCTTTTTGGTGATGCCACATTTTGATGGTGCCTTATATGTCTATAAACACCTTATCTGTCCATGCCTCTCCATGAGTCCCCAAATTGTTATGAACTCGTTCAACAAGCGGCAGGAGTCCCTTGTGAGAGATAACTTTCTCTCTCAGGTGGAGAGATATGTAAAGGAGAATGGACCTGAAAGTTTGGAAAAATTTATTCCTTGCAAGTCAACAAGGACAAATCTCGATGTAAAAGAGTTCAATGCAGTTTCATCCATGGATAATGAAGCGTCAAAATCCTTAAAGCCAAATGGTGGACCGAATGATATCAGAGCTGTGCAGGTTAGTCAGGCAGAGCCTGATCTCACTGTGAATGAAGATGGATTTTCTTCTAGGAAGATGAATGAAAAAGTCATCGAAGTTGCAGCCGACAGAGAAATTCTGAAGACTCCACCTCCAAAGGAAGTCCAGAAGGAGTGGACCACAGTCAATCCGCTGCAAACTCAAACTGATGCAACTTTGAATTCCCCTCTCGGTGATAATGAACACAAGGCTACATACGAGGCACTGAAGATAAAGAATGAGGCAGAGCTGAAGCTCACTTGCCCTGAAAACCGTACTGTTGCTGCCATGGAAATATATGAAAAGCCGGTTAAGGTTGGAACAGGTATAGAAGATCCAGAGTCTCCTAAAGAAGTCCAGAAAGAGTGGACTTGTGCTCTCTGTCAGGTAACTACTTCATGTGAAAGCAATTTGAATTCCCACCTGCAAGGGAGAAAACACAAGGCAGCATATGAGGCACTGAAAGCAAGGAACCAGGCATTTGTGTCCAAGATTGCCCCAGCTTCAACTGCAAAAACATCCAATCAACCGAATAAGGAGCCACGAAAGAGTATTCTGAGCAGAGGATCAAAACAAAAAGTTCCTGTAAGTGAAAATGTGCAAGGCCAGAAAAATAATAGTCCAGCTCCAATCACAAAGAAGCACCACAAACAGAAAGAGGAGCGCGCAGACGGTGTATCCAGCAATGGCCAGAAAGGGAAAATTCCTATACACGTCGAGAAAGTACAAAGTCAACAAACGAAGCCAAATAAAGTTCCAAGGGTGAAGAGTTCTCGTTTGTGGTGCGCAATTTGTAGCATACGCTGTCCTGGTGAGATTGACTTGCTGTCTCATCTCAACGGAAAAAAACACAAGGAAAAGGTGCAAGAACTACAAGAGAACCTAATCAAGCCCAGGGGCCCTTTGTGA

Protein Analysis

490

Amino Acids

55.21

Weight (kDa)

9.06

Isoelectric Point (pI)

35.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TB2_DP1_HVA22 PF03134 27 - 103 4.5e-19 TB2/DP1, HVA22 family
zf-met PF12874 311 - 335 9e-09 Zinc-finger of C2H2 type
zf-met PF12874 448 - 472 2e-07 Zinc-finger of C2H2 type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000440)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20313 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_5g25851
prunus_persica Prupe.8G072900_v2.0.a1 Prupe.8G072900_v2.0.a1 Prupe.8G072900_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1
pyrus_communis pycom01g01210 pycom02g12000 pycom10g21410 pycom11g11060 pycom13g24280
rosa_chinensis RchiOBHm_Chr3g0461871 RchiOBHm_Chr4g0427221 RchiOBHm_Chr4g0427231 RchiOBHm_Chr6g0270081 RchiOBHm_Chr6g0270121 RchiOBHm_Chr6g0270151 RchiOBHm_Chr6g0270161 RchiOBHm_Chr6g0270171 RchiOBHm_Chr6g0270181 RchiOBHm_Chr6g0270191 RchiOBHm_Chr7g0229301
rosa_laevigata RLG00000013809 RLG00000013810 RLG00000013812 RLG00000013814 RLG00000013817 RLG00000013818
rosa_multiflora Rmu_sc0000918.1_g000004 Rmu_sc0000918.1_g000019 Rmu_sc0000918.1_g000027 Rmu_sc0002817.1_g000013 Rmu_sc0004366.1_g000009 Rmu_sc0004376.1_g000011 Rmu_sc0004376.1_g000014 Rmu_sc0004376.1_g000021 Rmu_sc0006909.1_g000002 Rmu_sc0011356.1_g000003 Rmu_sc0011369.1_g000005 Rmu_sc0017552.1_g000001
rosa_roxburghii Rroxscaffold_5G00354200 Rroxscaffold_7G00198080 Rroxscaffold_7G00198090 Rroxscaffold_7G00198100 Rroxscaffold_7G00198130 Rroxscaffold_7G00198170
rosa_rugosa Rorug06G0052400 Rorug06G0052500 Rorug06G0053000
rosa_samantha Rh6AG171300 Rh6AG171400 Rh6AG171800 Rh6AG171900 Rh6AG172000 Rh6AG172100 Rh6AG369700 Rh6BG175800 Rh6BG175900 Rh6BG176200 Rh6BG176300 Rh6CG170900 Rh6CG171100 Rh6CG171400 Rh6CG171500 Rh6CG171700 Rh6CG171900 Rh6CG172000 Rh6CG172100
rosa_wichuraiana Rw6G014730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 996
Acc16I TGCGCA 1 cut(s) 1351
Acc36I ACCTGC 2 cut(s) 553, 996
AccB1I GGYRCC 1 cut(s) 272
AccB7I CCANNNNNTGG 1 cut(s) 536
AccII CGCG 1 cut(s) 1230
AciI CCGC 2 cut(s) 352, 716
AclWI GGATC 2 cut(s) 893, 1138
AcoI YGGCCR 2 cut(s) 218, 1252
AcsI RAATTY 6 cut(s) 112, 434, 660, 745, 979, 1266
AcuI CTGAAG 3 cut(s) 686, 812, 836
AfaI GTAC 2 cut(s) 841, 1290
AfiI CCNNNNNNNGG 1 cut(s) 536
AflIII ACRYGT 1 cut(s) 1276
AgsI TTSAA 7 cut(s) 179, 203, 346, 484, 745, 979, 1071
AhdI GACNNNNNGTC 1 cut(s) 1390
AjiI CACGTC 1 cut(s) 1279
AjnI CCWGG 3 cut(s) 1038, 1372, 1457
AluBI AGCT 6 cut(s) 196, 557, 814, 820, 1067, 1190
AluI AGCT 6 cut(s) 196, 557, 814, 820, 1067, 1190
Alw21I GWGCWC 1 cut(s) 943
Alw26I GTCTC 3 cut(s) 101, 912, 1398
AlwI GGATC 2 cut(s) 893, 1138
AlwNI CAGNNNCTG 1 cut(s) 581
AoxI GGCC 5 cut(s) 56, 218, 1168, 1252, 1462
ApaI GGGCCC 1 cut(s) 1466
ApeKI GCWGC 4 cut(s) 647, 718, 848, 1010
ApoI RAATTY 6 cut(s) 112, 434, 660, 745, 979, 1266
Asp700I GAANNNNTTC 1 cut(s) 341
AspLEI GCGC 4 cut(s) 31, 1230, 1232, 1352
AspS9I GGNCC 5 cut(s) 416, 539, 702, 1462, 1463
AsuHPI GGTGA 4 cut(s) 265, 770, 1339, 1388
AvaII GGWCC 3 cut(s) 416, 539, 702
BaeGI GKGCMC 1 cut(s) 1466
BalI TGGCCA 2 cut(s) 220, 1254
BanI GGYRCC 1 cut(s) 272
BanII GRGCYC 1 cut(s) 1466
BbsI GAAGAC 3 cut(s) 148, 235, 674
Bbv12I GWGCWC 1 cut(s) 943
BbvI GCAGC 4 cut(s) 659, 705, 835, 1022
BccI CCATC 2 cut(s) 263, 596
BciT130I CCWGG 3 cut(s) 1040, 1374, 1459
BciVI GTATCC 1 cut(s) 1252
BcoDI GTCTC 3 cut(s) 101, 912, 1398
BfaI CTAG 1 cut(s) 615
BfuAI ACCTGC 2 cut(s) 553, 996
BfuI GTATCC 1 cut(s) 1252
BisI GCNGC 5 cut(s) 353, 648, 719, 849, 1011
BlsI GCNGC 5 cut(s) 354, 649, 720, 850, 1012
Bme1390I CCNGG 3 cut(s) 1040, 1374, 1459
Bme18I GGWCC 3 cut(s) 416, 539, 702
BmeRI GACNNNNNGTC 1 cut(s) 1390
BmgBI CACGTC 1 cut(s) 1279
BmgT120I GGNCC 5 cut(s) 416, 539, 702, 1462, 1463
BmiI GGNNCC 6 cut(s) 209, 274, 1037, 1104, 1463, 1464
BmrFI CCNGG 3 cut(s) 1040, 1374, 1459
BmrI ACTGGG 1 cut(s) 20
BmsI GCATC 2 cut(s) 246, 724
BmuI ACTGGG 1 cut(s) 20
BoxI GACNNNNGTC 1 cut(s) 707
BpiI GAAGAC 3 cut(s) 148, 235, 674
BsaAI YACGTR 1 cut(s) 144
BsaJI CCNNGG 5 cut(s) 498, 852, 1322, 1457, 1458
BsaXI ACNNNNNCTCC 2 cut(s) 661, 691
Bsc4I CCNNNNNNNGG 1 cut(s) 536
Bse118I RCCGGY 1 cut(s) 871
Bse1I ACTGG 1 cut(s) 15
Bse3DI GCAATG 1 cut(s) 1255
BseBI CCWGG 3 cut(s) 1040, 1374, 1459
BseDI CCNNGG 5 cut(s) 498, 852, 1322, 1457, 1458
BseGI GGATG 2 cut(s) 494, 1082
BseLI CCNNNNNNNGG 1 cut(s) 536
BseMI GCAATG 1 cut(s) 1255
BseMII CTCAG 2 cut(s) 401, 1112
BseNI ACTGG 1 cut(s) 15
BsePI GCGCGC 1 cut(s) 1228
BseRI GAGGAG 1 cut(s) 1238
BseSI GKGCMC 1 cut(s) 1466
BseXI GCAGC 4 cut(s) 659, 705, 835, 1022
BseYI CCCAGC 1 cut(s) 1063
BsgI GTGCAG 1 cut(s) 581
Bsh1236I CGCG 1 cut(s) 1230
BshFI GGCC 5 cut(s) 58, 220, 1170, 1254, 1464
BshNI GGYRCC 1 cut(s) 272
BsiHKAI GWGCWC 1 cut(s) 943
BsiSI CCGG 1 cut(s) 872
BslFI GGGAC 2 cut(s) 306, 346
BslI CCNNNNNNNGG 1 cut(s) 536
BsmAI GTCTC 3 cut(s) 101, 912, 1398
BsmFI GGGAC 2 cut(s) 306, 346
BsnI GGCC 5 cut(s) 58, 220, 1170, 1254, 1464
Bsp120I GGGCCC 1 cut(s) 1462
Bsp1286I GDGCHC 2 cut(s) 943, 1466
Bsp143I GATC 4 cut(s) 165, 583, 898, 1130
Bsp19I CCATGG 2 cut(s) 498, 852
BspACI CCGC 2 cut(s) 352, 716
BspANI GGCC 5 cut(s) 58, 220, 1170, 1254, 1464
BspCNI CTCAG 2 cut(s) 400, 1113
BspFNI CGCG 1 cut(s) 1230
BspLI GGNNCC 6 cut(s) 209, 274, 1037, 1104, 1463, 1464
BspMI ACCTGC 2 cut(s) 553, 996
BspPI GGATC 2 cut(s) 893, 1138
BspT107I GGYRCC 1 cut(s) 272
BsrDI GCAATG 1 cut(s) 1255
BsrFI RCCGGY 1 cut(s) 871
BsrI ACTGG 1 cut(s) 15
BssAI RCCGGY 1 cut(s) 871
BssECI CCNNGG 5 cut(s) 498, 852, 1322, 1457, 1458
BssHII GCGCGC 1 cut(s) 1228
BssMI GATC 4 cut(s) 165, 583, 898, 1130
BssT1I CCWWGG 3 cut(s) 498, 852, 1322
Bst2UI CCWGG 3 cut(s) 1040, 1374, 1459
Bst4CI ACNGT 5 cut(s) 592, 709, 839, 844, 1238
Bst6I CTCTTC 1 cut(s) 1325
BstBAI YACGTR 1 cut(s) 144
BstC8I GCNNGC 1 cut(s) 1230
BstDEI CTNAG 2 cut(s) 387, 1121
BstDSI CCRYGG 2 cut(s) 498, 852
BstF5I GGATG 2 cut(s) 494, 1082
BstFNI CGCG 1 cut(s) 1230
BstHHI GCGC 4 cut(s) 31, 1230, 1232, 1352
BstKTI GATC 4 cut(s) 168, 586, 901, 1133
BstMAI GTCTC 3 cut(s) 101, 912, 1398
BstMBI GATC 4 cut(s) 165, 583, 898, 1130
BstMWI GCNNNNNNNGC 3 cut(s) 1019, 1028, 1073
BstNI CCWGG 3 cut(s) 1040, 1374, 1459
BstNSI RCATGY 1 cut(s) 185
BstPAI GACNNNNGTC 1 cut(s) 707
BstSCI CCNGG 3 cut(s) 1038, 1372, 1457
BstSLI GKGCMC 1 cut(s) 1466
BstSNI TACGTA 1 cut(s) 144
BstUI CGCG 1 cut(s) 1230
BstV1I GCAGC 4 cut(s) 659, 705, 835, 1022
BstV2I GAAGAC 3 cut(s) 148, 235, 674
BstX2I RGATCY 1 cut(s) 898
BstYI RGATCY 1 cut(s) 898
BsuI GTATCC 1 cut(s) 1252
BsuRI GGCC 5 cut(s) 58, 220, 1170, 1254, 1464
BtgI CCRYGG 2 cut(s) 498, 852
BtrI CACGTC 1 cut(s) 1279
BtsCI GGATG 2 cut(s) 494, 1082
BtsIMutI CAGTG 3 cut(s) 588, 788, 1022
BveI ACCTGC 2 cut(s) 553, 996
Cac8I GCNNGC 1 cut(s) 1230
CaiI CAGNNNCTG 1 cut(s) 581
CfoI GCGC 4 cut(s) 31, 1230, 1232, 1352
Cfr10I RCCGGY 1 cut(s) 871
Cfr13I GGNCC 5 cut(s) 416, 539, 702, 1462, 1463
CseI GACGC 1 cut(s) 501
Csp6I GTAC 2 cut(s) 840, 1289
CviAII CATG 7 cut(s) 54, 182, 306, 316, 499, 853, 963
CviQI GTAC 2 cut(s) 840, 1289
DdeI CTNAG 2 cut(s) 387, 1121
DpnI GATC 4 cut(s) 167, 585, 900, 1132
DpnII GATC 4 cut(s) 165, 583, 898, 1130
DriI GACNNNNNGTC 1 cut(s) 1390
EaeI YGGCCR 2 cut(s) 218, 1252
Eam1104I CTCTTC 1 cut(s) 1325
Eam1105I GACNNNNNGTC 1 cut(s) 1390
EarI CTCTTC 1 cut(s) 1325
Eco105I TACGTA 1 cut(s) 144
Eco130I CCWWGG 3 cut(s) 498, 852, 1322
Eco24I GRGCYC 1 cut(s) 1466
Eco32I GATATC 1 cut(s) 550
Eco47I GGWCC 3 cut(s) 416, 539, 702
Eco57I CTGAAG 3 cut(s) 686, 812, 836
EcoO109I RGGNCCY 2 cut(s) 1462, 1463
EcoRI GAATTC 2 cut(s) 745, 979
EcoRII CCWGG 3 cut(s) 1038, 1372, 1457
EcoRV GATATC 1 cut(s) 550
EcoT14I CCWWGG 3 cut(s) 498, 852, 1322
EcoT38I GRGCYC 1 cut(s) 1466
ErhI CCWWGG 3 cut(s) 498, 852, 1322
FaeI CATG 7 cut(s) 57, 185, 309, 319, 502, 856, 966
FaqI GGGAC 2 cut(s) 306, 346
FatI CATG 7 cut(s) 53, 181, 305, 315, 498, 852, 962
FauNDI CATATG 1 cut(s) 1015
Fnu4HI GCNGC 5 cut(s) 353, 648, 719, 849, 1011
FokI GGATG 2 cut(s) 481, 1069
FriOI GRGCYC 1 cut(s) 1466
Fsp4HI GCNGC 5 cut(s) 353, 648, 719, 849, 1011
FspBI CTAG 1 cut(s) 615
FspI TGCGCA 1 cut(s) 1351
GlaI GCGC 4 cut(s) 30, 1229, 1231, 1351
GluI GCNGC 5 cut(s) 353, 648, 719, 849, 1011
GsaI CCCAGC 1 cut(s) 1067
HaeIII GGCC 5 cut(s) 58, 220, 1170, 1254, 1464
HapII CCGG 1 cut(s) 872
HgaI GACGC 1 cut(s) 501
HhaI GCGC 4 cut(s) 31, 1230, 1232, 1352
Hin1II CATG 7 cut(s) 57, 185, 309, 319, 502, 856, 966
Hin6I GCGC 4 cut(s) 29, 1228, 1230, 1350
HinP1I GCGC 4 cut(s) 29, 1228, 1230, 1350
HincII GTYRAC 2 cut(s) 453, 1298
HindII GTYRAC 2 cut(s) 453, 1298
HinfI GANTC 4 cut(s) 319, 359, 670, 905
HpaII CCGG 1 cut(s) 872
HphI GGTGA 4 cut(s) 265, 770, 1339, 1388
Hpy166II GTNNAC 6 cut(s) 8, 453, 539, 702, 933, 1298
Hpy188I TCNGA 3 cut(s) 554, 666, 1122
Hpy188III TCNNGA 6 cut(s) 106, 467, 691, 902, 922, 1282
Hpy8I GTNNAC 6 cut(s) 8, 453, 539, 702, 933, 1298
Hpy99I CGWCG 1 cut(s) 1283
HpyAV CCTTC 1 cut(s) 688
HpyCH4III ACNGT 5 cut(s) 592, 709, 839, 844, 1238
HpyCH4IV ACGT 2 cut(s) 143, 1278
HpyF10VI GCNNNNNNNGC 3 cut(s) 1019, 1028, 1073
HpyF3I CTNAG 2 cut(s) 387, 1121
HpySE526I ACGT 2 cut(s) 143, 1278
Hsp92II CATG 7 cut(s) 57, 185, 309, 319, 502, 856, 966
HspAI GCGC 4 cut(s) 29, 1228, 1230, 1350
Kzo9I GATC 4 cut(s) 165, 583, 898, 1130
LmnI GCTCC 5 cut(s) 36, 201, 1102, 1195, 1225
Lsp1109I GCAGC 4 cut(s) 659, 705, 835, 1022
LweI GCATC 2 cut(s) 246, 724
MaeI CTAG 1 cut(s) 615
MaeII ACGT 2 cut(s) 143, 1278
MaeIII GTNAC 1 cut(s) 952
MalI GATC 4 cut(s) 167, 585, 900, 1132
MboI GATC 4 cut(s) 165, 583, 898, 1130
MflI RGATCY 1 cut(s) 898
MhlI GDGCHC 2 cut(s) 943, 1466
MlsI TGGCCA 2 cut(s) 220, 1254
MluCI AATT 9 cut(s) 112, 327, 434, 660, 745, 973, 979, 1266, 1353
MluNI TGGCCA 2 cut(s) 220, 1254
MlyI GAGTC 4 cut(s) 328, 368, 664, 914
MmeI TCCRAC 1 cut(s) 862
Mox20I TGGCCA 2 cut(s) 220, 1254
MroXI GAANNNNTTC 1 cut(s) 341
MscI TGGCCA 2 cut(s) 220, 1254
MseI TTAA 3 cut(s) 96, 524, 876
MslI CAYNNNNRTG 1 cut(s) 267
Msp20I TGGCCA 2 cut(s) 220, 1254
MspA1I CMGCKG 1 cut(s) 718
MspI CCGG 1 cut(s) 872
MspR9I CCNGG 3 cut(s) 1040, 1374, 1459
MvaI CCWGG 3 cut(s) 1040, 1374, 1459
MvnI CGCG 1 cut(s) 1230
MwoI GCNNNNNNNGC 3 cut(s) 1019, 1028, 1073
NcoI CCATGG 2 cut(s) 498, 852
NdeI CATATG 1 cut(s) 1015
NdeII GATC 4 cut(s) 165, 583, 898, 1130
NlaIII CATG 7 cut(s) 57, 185, 309, 319, 502, 856, 966
NlaIV GGNNCC 6 cut(s) 209, 274, 1037, 1104, 1463, 1464
NsbI TGCGCA 1 cut(s) 1351
NspI RCATGY 1 cut(s) 185
PaqCI CACCTGC 1 cut(s) 996
PasI CCCWGGG 1 cut(s) 1458
PauI GCGCGC 1 cut(s) 1228
PdmI GAANNNNTTC 1 cut(s) 341
PflMI CCANNNNNTGG 1 cut(s) 536
PkrI GCNGC 5 cut(s) 354, 649, 720, 850, 1012
PleI GAGTC 4 cut(s) 327, 367, 664, 913
PpsI GAGTC 4 cut(s) 327, 367, 664, 913
Ppu21I YACGTR 1 cut(s) 144
PshAI GACNNNNGTC 1 cut(s) 707
Psp6I CCWGG 3 cut(s) 1038, 1372, 1457
PspFI CCCAGC 1 cut(s) 1063
PspGI CCWGG 3 cut(s) 1038, 1372, 1457
PspN4I GGNNCC 6 cut(s) 209, 274, 1037, 1104, 1463, 1464
PspOMI GGGCCC 1 cut(s) 1462
PspPI GGNCC 5 cut(s) 416, 539, 702, 1462, 1463
PstNI CAGNNNCTG 1 cut(s) 581
PsuI RGATCY 1 cut(s) 898
PteI GCGCGC 1 cut(s) 1228
RsaI GTAC 2 cut(s) 841, 1290
RsaNI GTAC 2 cut(s) 840, 1289
RseI CAYNNNNRTG 1 cut(s) 267
SaqAI TTAA 3 cut(s) 96, 524, 876
SatI GCNGC 5 cut(s) 353, 648, 719, 849, 1011
Sau3AI GATC 4 cut(s) 165, 583, 898, 1130
Sau96I GGNCC 5 cut(s) 416, 539, 702, 1462, 1463
SchI GAGTC 4 cut(s) 328, 368, 664, 914
ScrFI CCNGG 3 cut(s) 1040, 1374, 1459
SduI GDGCHC 2 cut(s) 943, 1466
SfaNI GCATC 2 cut(s) 246, 724
SinI GGWCC 3 cut(s) 416, 539, 702
SmiMI CAYNNNNRTG 1 cut(s) 267
SnaBI TACGTA 1 cut(s) 144
Sse9I AATT 9 cut(s) 112, 327, 434, 660, 745, 973, 979, 1266, 1353
SsiI CCGC 2 cut(s) 352, 716
SspMI CTAG 1 cut(s) 615
StyD4I CCNGG 3 cut(s) 1038, 1372, 1457
StyI CCWWGG 3 cut(s) 498, 852, 1322
TaaI ACNGT 5 cut(s) 592, 709, 839, 844, 1238
TaiI ACGT 2 cut(s) 146, 1281
TaqI TCGA 4 cut(s) 105, 468, 639, 1281
TaqII GACCGA 1 cut(s) 556
TasI AATT 9 cut(s) 112, 327, 434, 660, 745, 973, 979, 1266, 1353
TatI WGTACW 1 cut(s) 1288
TauI GCSGC 1 cut(s) 355
Tru1I TTAA 3 cut(s) 96, 524, 876
Tru9I TTAA 3 cut(s) 96, 524, 876
TscAI CASTG 3 cut(s) 595, 795, 1029
TseI GCWGC 4 cut(s) 647, 718, 848, 1010
TspGWI ACGGA 1 cut(s) 1419
TspRI CASTG 3 cut(s) 595, 795, 1029
Van91I CCANNNNNTGG 1 cut(s) 536
VpaK11BI GGWCC 3 cut(s) 416, 539, 702
XapI RAATTY 6 cut(s) 112, 434, 660, 745, 979, 1266
XceI RCATGY 1 cut(s) 185
XmnI GAANNNNTTC 1 cut(s) 341
XspI CTAG 1 cut(s) 615
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.