Rmu_sc0004366.1_g000009

HVA22-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004366.1
OG0000440
Physical Location & Seq
Reverse (-)
42890 .. 48164
5275 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004366.1_g000009.1.cds

Sequence Viewer

Length: 1830 bp
atgccgagtccaccaaccaccatcggtctcgaagatgcgagttcaccaccgtctgcgccggacgacgaatggacgttaatcaatgaggcggccggttggggatggagatctcagcgtcatggagatctctgtgatgcaggaaattgctgctcccttctagacgaagacaacgacgatgatgaagaagagaggcggattccggtcaccggtcgttggattccggtcacggtcaccggtcgccggcgccttgccactgcccgtaaccataggaagacgctgaagctcaagatgggcttactgggtctcgttggatttgcgctccaatgctttgatgttcttgcatggcctctctttgctctggtctatcctctgtattcttccattaaagcaattgagacaaattccattacagatactcacaagataaacacgtattgggtcgtcttctcattgatcttgctatttgaacatgcttttatgaagctccttgaatggttcctgctctggccatacattaggctactgattgtcttctttttggtgatgccacattttgatggtgccttatatgtctatcaacaccttatctgtccatgcctctccatggatccccaaattgttattaacttgttcaacaagcggaaggagtccctagtgagagataactttctctctgaggtggagagatatgtcaaggagaacggacctgaaggtttggaaaattttattgcttgcaagtcaacgaggacaaatctcaatgtaaaagagttcattgcagtttcatccatggataatgaagcgtcaaaatcatcaaaatccataaagccaaatggcggacagaatgatatcaaagctgtgcaggaaatggtgaaaaagaaggaaacaactgctagccaagttagtcaggcagagcctgatcttactgtgaatgaagataaattttcttctaggaagatgaatgaaaaaatcattgaggttgcagccaacagagaaattctgaatactccgcctccaaagaaagtacagaaggagtggaccaaagtcagtccgctaccaactcaaactgatgcaacttttaattcccctctcagtgataataaacacaaggctaaaaacgaggcactgaagatgaagaatgaggcagagccgaagttcactgggcctgaaaaccgtactgttgcagccatggaaatatatgaaaagccggttgaggttggaattgctatagaagatccagagcctcctaaagaagtccagaaagagtggacttgtgctctctgtcaggtaactacttcatgtgaaagcaatttgaattcccacctgcgagggagaaaacacaaggcagcatatgaggcactgaaagcagggaaccaggcatttgggcccaagatttccccagcttcaactgcaaaaacatccaatcaaccaaataaggagccaggaaagagtattccgaagaaaatgaaaatgaaaatgtgcaaggccagaaaaatagtagtccagctccaatcacaaagaagcaatccagcaatggccagaaagggatcaaaacaaaaggttactgtaaatgtaaatgtgcaaggccagaaaaatagtagtccagctccaatcacaaagaagcaatccagcaatggccagaaagggaaaattcctatacacgtcgagaaggtacaaagtcaacaaccgaagcaaaatgaagttccaagggtgaagggttctcctttgcggtgcgcaatctgtaacatacgctgttatgatgagattgccatgctgtctcatctcaaaggaaaaaaacacaaggaaaagtgcaagaacaacaggagaacctaa

Protein Analysis

609

Amino Acids

68.5

Weight (kDa)

9.35

Isoelectric Point (pI)

46.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000440)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20313 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_5g25851
prunus_persica Prupe.8G072900_v2.0.a1 Prupe.8G072900_v2.0.a1 Prupe.8G072900_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1
pyrus_communis pycom01g01210 pycom02g12000 pycom10g21410 pycom11g11060 pycom13g24280
rosa_chinensis RchiOBHm_Chr3g0461871 RchiOBHm_Chr4g0427221 RchiOBHm_Chr4g0427231 RchiOBHm_Chr6g0270081 RchiOBHm_Chr6g0270121 RchiOBHm_Chr6g0270151 RchiOBHm_Chr6g0270161 RchiOBHm_Chr6g0270171 RchiOBHm_Chr6g0270181 RchiOBHm_Chr6g0270191 RchiOBHm_Chr7g0229301
rosa_laevigata RLG00000013809 RLG00000013810 RLG00000013812 RLG00000013814 RLG00000013817 RLG00000013818
rosa_multiflora Rmu_sc0000918.1_g000004 Rmu_sc0000918.1_g000019 Rmu_sc0000918.1_g000027 Rmu_sc0002817.1_g000013 Rmu_sc0004366.1_g000009 Rmu_sc0004376.1_g000011 Rmu_sc0004376.1_g000014 Rmu_sc0004376.1_g000021 Rmu_sc0006909.1_g000002 Rmu_sc0011356.1_g000003 Rmu_sc0011369.1_g000005 Rmu_sc0017552.1_g000001
rosa_roxburghii Rroxscaffold_5G00354200 Rroxscaffold_7G00198080 Rroxscaffold_7G00198090 Rroxscaffold_7G00198100 Rroxscaffold_7G00198130 Rroxscaffold_7G00198170
rosa_rugosa Rorug06G0052400 Rorug06G0052500 Rorug06G0053000
rosa_samantha Rh6AG171300 Rh6AG171400 Rh6AG171800 Rh6AG171900 Rh6AG172000 Rh6AG172100 Rh6AG369700 Rh6BG175800 Rh6BG175900 Rh6BG176200 Rh6BG176300 Rh6CG170900 Rh6CG171100 Rh6CG171400 Rh6CG171500 Rh6CG171700 Rh6CG171900 Rh6CG172000 Rh6CG172100
rosa_wichuraiana Rw6G014730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1329
Acc16I TGCGCA 1 cut(s) 1732
Acc36I ACCTGC 1 cut(s) 1329
AccB1I GGYRCC 2 cut(s) 243, 560
AciI CCGC 7 cut(s) 89, 193, 640, 834, 1007, 1049, 1726
AclWI GGATC 4 cut(s) 602, 615, 1226, 1552
AcoI YGGCCR 4 cut(s) 90, 506, 1533, 1633
AcsI RAATTY 6 cut(s) 400, 721, 938, 993, 1312, 1647
AcuI CTGAAG 3 cut(s) 299, 729, 1145
AcyI GRCGYC 1 cut(s) 244
AfaI GTAC 3 cut(s) 1023, 1174, 1671
AfiI CCNNNNNNNGG 5 cut(s) 206, 213, 240, 604, 833
AflIII ACRYGT 2 cut(s) 429, 1657
AgeI ACCGGT 2 cut(s) 206, 233
AgsI TTSAA 5 cut(s) 467, 491, 634, 1312, 1404
AjiI CACGTC 1 cut(s) 1660
AjnI CCWGG 2 cut(s) 1371, 1438
AluBI AGCT 6 cut(s) 283, 484, 854, 1400, 1504, 1604
AluI AGCT 6 cut(s) 283, 484, 854, 1400, 1504, 1604
Alw21I GWGCWC 1 cut(s) 1276
Alw26I GTCTC 4 cut(s) 32, 308, 389, 1779
AlwI GGATC 4 cut(s) 602, 615, 1226, 1552
AlwNI CAGNNNCTG 1 cut(s) 914
AoxI GGCC 9 cut(s) 90, 344, 506, 1160, 1382, 1482, 1533, 1582, 1633
ApaI GGGCCC 1 cut(s) 1386
ApeKI GCWGC 4 cut(s) 147, 980, 1181, 1343
ApoI RAATTY 6 cut(s) 400, 721, 938, 993, 1312, 1647
AsiGI ACCGGT 2 cut(s) 206, 233
AspLEI GCGC 4 cut(s) 58, 246, 319, 1733
AspS9I GGNCC 5 cut(s) 704, 1035, 1160, 1382, 1383
AsuHPI GGTGA 6 cut(s) 36, 196, 223, 553, 880, 1720
AsuNHI GCTAGC 1 cut(s) 890
AvaII GGWCC 2 cut(s) 704, 1035
BaeGI GKGCMC 1 cut(s) 1386
BalI TGGCCA 3 cut(s) 508, 1535, 1635
BamHI GGATCC 1 cut(s) 607
BanI GGYRCC 2 cut(s) 243, 560
BanII GRGCYC 1 cut(s) 1386
BbsI GAAGAC 4 cut(s) 171, 278, 436, 523
Bbv12I GWGCWC 1 cut(s) 1276
BbvI GCAGC 4 cut(s) 134, 992, 1193, 1355
BccI CCATC 4 cut(s) 29, 96, 283, 551
BciT130I CCWGG 2 cut(s) 1373, 1440
BcoDI GTCTC 4 cut(s) 32, 308, 389, 1779
BfaI CTAG 4 cut(s) 158, 653, 891, 948
BfmI CTRYAG 1 cut(s) 1224
BfoI RGCGCY 1 cut(s) 247
BfuAI ACCTGC 1 cut(s) 1329
BglII AGATCT 2 cut(s) 107, 124
BisI GCNGC 5 cut(s) 90, 148, 981, 1182, 1344
BlsI GCNGC 5 cut(s) 91, 149, 982, 1183, 1345
Bme1390I CCNGG 2 cut(s) 1373, 1440
Bme18I GGWCC 2 cut(s) 704, 1035
BmgBI CACGTC 1 cut(s) 1660
BmgT120I GGNCC 5 cut(s) 704, 1035, 1160, 1382, 1383
BmiI GGNNCC 7 cut(s) 245, 497, 562, 609, 1370, 1384, 1437
BmrFI CCNGG 2 cut(s) 1373, 1440
BmrI ACTGGG 2 cut(s) 308, 1167
BmsI GCATC 4 cut(s) 25, 124, 534, 1057
BmtI GCTAGC 1 cut(s) 894
BmuI ACTGGG 2 cut(s) 308, 1167
BoxI GACNNNNGTC 1 cut(s) 1040
BpiI GAAGAC 4 cut(s) 171, 278, 436, 523
BpuEI CTTGAG 1 cut(s) 269
BsaAI YACGTR 1 cut(s) 432
BsaBI GATNNNNATC 1 cut(s) 106
BsaHI GRCGYC 1 cut(s) 244
BsaI GGTCTC 2 cut(s) 32, 308
BsaJI CCNNGG 4 cut(s) 603, 786, 1185, 1703
BsaWI WCCGGW 4 cut(s) 199, 206, 220, 233
BsaXI ACNNNNNCTCC 2 cut(s) 994, 1024
Bsc4I CCNNNNNNNGG 5 cut(s) 206, 213, 240, 604, 833
Bse118I RCCGGY 5 cut(s) 92, 206, 233, 240, 1204
Bse1I ACTGG 2 cut(s) 303, 1162
Bse3DI GCAATG 3 cut(s) 771, 1536, 1636
Bse8I GATNNNNATC 1 cut(s) 106
BseBI CCWGG 2 cut(s) 1373, 1440
BseDI CCNNGG 4 cut(s) 603, 786, 1185, 1703
BseGI GGATG 3 cut(s) 107, 782, 1415
BseJI GATNNNNATC 1 cut(s) 106
BseLI CCNNNNNNNGG 5 cut(s) 206, 213, 240, 604, 833
BseMI GCAATG 3 cut(s) 771, 1536, 1636
BseMII CTCAG 3 cut(s) 125, 666, 1102
BseNI ACTGG 2 cut(s) 303, 1162
BseSI GKGCMC 1 cut(s) 1386
BseX3I CGGCCG 1 cut(s) 90
BseXI GCAGC 4 cut(s) 134, 992, 1193, 1355
BseYI CCCAGC 1 cut(s) 1396
BsgI GTGCAG 1 cut(s) 878
Bsh1285I CGRYCG 3 cut(s) 93, 211, 238
BshFI GGCC 9 cut(s) 92, 346, 508, 1162, 1384, 1484, 1535, 1584, 1635
BshNI GGYRCC 2 cut(s) 243, 560
BshTI ACCGGT 2 cut(s) 206, 233
BsiEI CGRYCG 3 cut(s) 93, 211, 238
BsiHKAI GWGCWC 1 cut(s) 1276
BsiSI CCGG 8 cut(s) 59, 93, 200, 207, 221, 234, 241, 1205
BslFI GGGAC 1 cut(s) 634
BslI CCNNNNNNNGG 5 cut(s) 206, 213, 240, 604, 833
BsmAI GTCTC 4 cut(s) 32, 308, 389, 1779
BsmFI GGGAC 1 cut(s) 634
BsnI GGCC 9 cut(s) 92, 346, 508, 1162, 1384, 1484, 1535, 1584, 1635
Bso31I GGTCTC 2 cut(s) 32, 308
Bsp120I GGGCCC 1 cut(s) 1382
Bsp1286I GDGCHC 2 cut(s) 1276, 1386
Bsp143I GATC 7 cut(s) 107, 124, 453, 607, 916, 1231, 1544
Bsp19I CCATGG 3 cut(s) 603, 786, 1185
BspACI CCGC 7 cut(s) 89, 193, 640, 834, 1007, 1049, 1726
BspANI GGCC 9 cut(s) 92, 346, 508, 1162, 1384, 1484, 1535, 1584, 1635
BspCNI CTCAG 3 cut(s) 124, 667, 1101
BspLI GGNNCC 7 cut(s) 245, 497, 562, 609, 1370, 1384, 1437
BspMI ACCTGC 1 cut(s) 1329
BspOI GCTAGC 1 cut(s) 894
BspPI GGATC 4 cut(s) 602, 615, 1226, 1552
BspT107I GGYRCC 2 cut(s) 243, 560
BspTNI GGTCTC 2 cut(s) 32, 308
BsrDI GCAATG 3 cut(s) 771, 1536, 1636
BsrFI RCCGGY 5 cut(s) 92, 206, 233, 240, 1204
BsrI ACTGG 2 cut(s) 303, 1162
BssAI RCCGGY 5 cut(s) 92, 206, 233, 240, 1204
BssECI CCNNGG 4 cut(s) 603, 786, 1185, 1703
BssMI GATC 7 cut(s) 107, 124, 453, 607, 916, 1231, 1544
BssNI GRCGYC 1 cut(s) 244
BssT1I CCWWGG 4 cut(s) 603, 786, 1185, 1703
Bst2UI CCWGG 2 cut(s) 1373, 1440
Bst4CI ACNGT 6 cut(s) 51, 229, 925, 1172, 1177, 1564
Bst6I CTCTTC 1 cut(s) 180
BstACI GRCGYC 1 cut(s) 244
BstBAI YACGTR 1 cut(s) 432
BstC8I GCNNGC 3 cut(s) 242, 733, 892
BstDEI CTNAG 3 cut(s) 111, 675, 1088
BstDSI CCRYGG 3 cut(s) 603, 786, 1185
BstEII GGTNACC 2 cut(s) 202, 229
BstF5I GGATG 3 cut(s) 107, 782, 1415
BstH2I RGCGCY 1 cut(s) 247
BstHHI GCGC 4 cut(s) 58, 246, 319, 1733
BstKTI GATC 7 cut(s) 110, 127, 456, 610, 919, 1234, 1547
BstMAI GTCTC 4 cut(s) 32, 308, 389, 1779
BstMBI GATC 7 cut(s) 107, 124, 453, 607, 916, 1231, 1544
BstMCI CGRYCG 3 cut(s) 93, 211, 238
BstMWI GCNNNNNNNGC 3 cut(s) 1352, 1361, 1406
BstNI CCWGG 2 cut(s) 1373, 1440
BstNSI RCATGY 1 cut(s) 473
BstPAI GACNNNNGTC 1 cut(s) 1040
BstPI GGTNACC 2 cut(s) 202, 229
BstSCI CCNGG 2 cut(s) 1371, 1438
BstSFI CTRYAG 1 cut(s) 1224
BstSLI GKGCMC 1 cut(s) 1386
BstV1I GCAGC 4 cut(s) 134, 992, 1193, 1355
BstV2I GAAGAC 4 cut(s) 171, 278, 436, 523
BstX2I RGATCY 4 cut(s) 107, 124, 607, 1231
BstXI CCANNNNNNTGG 1 cut(s) 1379
BstYI RGATCY 4 cut(s) 107, 124, 607, 1231
BstZI CGGCCG 1 cut(s) 90
BsuRI GGCC 9 cut(s) 92, 346, 508, 1162, 1384, 1484, 1535, 1584, 1635
BtgI CCRYGG 3 cut(s) 603, 786, 1185
BtrI CACGTC 1 cut(s) 1660
BtsCI GGATG 3 cut(s) 107, 782, 1415
BtsI GCAGTG 1 cut(s) 252
BtsIMutI CAGTG 5 cut(s) 252, 1096, 1121, 1155, 1355
BveI ACCTGC 1 cut(s) 1329
Cac8I GCNNGC 3 cut(s) 242, 733, 892
CaiI CAGNNNCTG 1 cut(s) 914
CfoI GCGC 4 cut(s) 58, 246, 319, 1733
Cfr10I RCCGGY 5 cut(s) 92, 206, 233, 240, 1204
Cfr13I GGNCC 5 cut(s) 704, 1035, 1160, 1382, 1383
CseI GACGC 3 cut(s) 104, 283, 789
Csp6I GTAC 3 cut(s) 1022, 1173, 1670
CspAI ACCGGT 2 cut(s) 206, 233
CviAII CATG 9 cut(s) 119, 342, 470, 594, 604, 787, 1186, 1296, 1768
CviQI GTAC 3 cut(s) 1022, 1173, 1670
DdeI CTNAG 3 cut(s) 111, 675, 1088
DinI GGCGCC 1 cut(s) 245
DpnI GATC 7 cut(s) 109, 126, 455, 609, 918, 1233, 1546
DpnII GATC 7 cut(s) 107, 124, 453, 607, 916, 1231, 1544
EaeI YGGCCR 4 cut(s) 90, 506, 1533, 1633
EagI CGGCCG 1 cut(s) 90
Eam1104I CTCTTC 1 cut(s) 180
EarI CTCTTC 1 cut(s) 180
EciI GGCGGA 3 cut(s) 208, 849, 996
EclXI CGGCCG 1 cut(s) 90
Eco130I CCWWGG 4 cut(s) 603, 786, 1185, 1703
Eco24I GRGCYC 1 cut(s) 1386
Eco31I GGTCTC 2 cut(s) 32, 308
Eco32I GATATC 1 cut(s) 847
Eco47I GGWCC 2 cut(s) 704, 1035
Eco52I CGGCCG 1 cut(s) 90
Eco57I CTGAAG 3 cut(s) 299, 729, 1145
Eco91I GGTNACC 2 cut(s) 202, 229
EcoO65I GGTNACC 2 cut(s) 202, 229
EcoRI GAATTC 1 cut(s) 1312
EcoRII CCWGG 2 cut(s) 1371, 1438
EcoRV GATATC 1 cut(s) 847
EcoT14I CCWWGG 4 cut(s) 603, 786, 1185, 1703
EcoT38I GRGCYC 1 cut(s) 1386
EgeI GGCGCC 1 cut(s) 245
EheI GGCGCC 1 cut(s) 245
ErhI CCWWGG 4 cut(s) 603, 786, 1185, 1703
FaeI CATG 9 cut(s) 122, 345, 473, 597, 607, 790, 1189, 1299, 1771
FalI AAGNNNNNCTT 2 cut(s) 278, 310
FaqI GGGAC 1 cut(s) 634
FatI CATG 9 cut(s) 118, 341, 469, 593, 603, 786, 1185, 1295, 1767
FauNDI CATATG 1 cut(s) 1348
Fnu4HI GCNGC 5 cut(s) 90, 148, 981, 1182, 1344
FokI GGATG 3 cut(s) 114, 769, 1402
FriOI GRGCYC 1 cut(s) 1386
Fsp4HI GCNGC 5 cut(s) 90, 148, 981, 1182, 1344
FspBI CTAG 4 cut(s) 158, 653, 891, 948
FspI TGCGCA 1 cut(s) 1732
GlaI GCGC 4 cut(s) 57, 245, 318, 1732
GluI GCNGC 5 cut(s) 90, 148, 981, 1182, 1344
GsaI CCCAGC 1 cut(s) 1400
HaeII RGCGCY 1 cut(s) 247
HaeIII GGCC 9 cut(s) 92, 346, 508, 1162, 1384, 1484, 1535, 1584, 1635
HapII CCGG 8 cut(s) 59, 93, 200, 207, 221, 234, 241, 1205
HgaI GACGC 3 cut(s) 104, 283, 789
HhaI GCGC 4 cut(s) 58, 246, 319, 1733
Hin1I GRCGYC 1 cut(s) 244
Hin1II CATG 9 cut(s) 122, 345, 473, 597, 607, 790, 1189, 1299, 1771
Hin6I GCGC 4 cut(s) 56, 244, 317, 1731
HinP1I GCGC 4 cut(s) 56, 244, 317, 1731
HincII GTYRAC 2 cut(s) 741, 1679
HindII GTYRAC 2 cut(s) 741, 1679
HinfI GANTC 4 cut(s) 7, 196, 217, 647
HpaII CCGG 8 cut(s) 59, 93, 200, 207, 221, 234, 241, 1205
HphI GGTGA 6 cut(s) 36, 196, 223, 553, 880, 1720
Hpy166II GTNNAC 7 cut(s) 11, 44, 741, 1035, 1155, 1266, 1679
Hpy188I TCNGA 3 cut(s) 676, 999, 1455
Hpy188III TCNNGA 6 cut(s) 29, 158, 286, 1235, 1255, 1663
Hpy8I GTNNAC 7 cut(s) 11, 44, 741, 1035, 1155, 1266, 1679
Hpy99I CGWCG 3 cut(s) 68, 176, 1664
HpyAV CCTTC 7 cut(s) 164, 637, 704, 871, 1021, 1660, 1705
HpyCH4III ACNGT 6 cut(s) 51, 229, 925, 1172, 1177, 1564
HpyCH4IV ACGT 3 cut(s) 74, 431, 1659
HpyF10VI GCNNNNNNNGC 3 cut(s) 1352, 1361, 1406
HpyF3I CTNAG 3 cut(s) 111, 675, 1088
HpySE526I ACGT 3 cut(s) 74, 431, 1659
Hsp92I GRCGYC 1 cut(s) 244
Hsp92II CATG 9 cut(s) 122, 345, 473, 597, 607, 790, 1189, 1299, 1771
HspAI GCGC 4 cut(s) 56, 244, 317, 1731
KasI GGCGCC 1 cut(s) 243
KroI GCCGGC 1 cut(s) 240
KroNI GCCGGC 1 cut(s) 242
Kzo9I GATC 7 cut(s) 107, 124, 453, 607, 916, 1231, 1544
LmnI GCTCC 6 cut(s) 155, 324, 489, 1435, 1509, 1609
Lsp1109I GCAGC 4 cut(s) 134, 992, 1193, 1355
LweI GCATC 4 cut(s) 25, 124, 534, 1057
MaeI CTAG 4 cut(s) 158, 653, 891, 948
MaeII ACGT 3 cut(s) 74, 431, 1659
MaeIII GTNAC 7 cut(s) 202, 223, 229, 260, 1285, 1558, 1739
MalI GATC 7 cut(s) 109, 126, 455, 609, 918, 1233, 1546
MboI GATC 7 cut(s) 107, 124, 453, 607, 916, 1231, 1544
MfeI CAATTG 1 cut(s) 390
MflI RGATCY 4 cut(s) 107, 124, 607, 1231
MhlI GDGCHC 2 cut(s) 1276, 1386
MlsI TGGCCA 3 cut(s) 508, 1535, 1635
MluNI TGGCCA 3 cut(s) 508, 1535, 1635
Mly113I GGCGCC 1 cut(s) 244
MlyI GAGTC 2 cut(s) 16, 656
MmeI TCCRAC 3 cut(s) 194, 289, 1195
Mox20I TGGCCA 3 cut(s) 508, 1535, 1635
MreI CGCCGGCG 1 cut(s) 240
MroNI GCCGGC 1 cut(s) 240
MscI TGGCCA 3 cut(s) 508, 1535, 1635
MseI TTAA 4 cut(s) 77, 384, 624, 1077
MslI CAYNNNNRTG 1 cut(s) 555
Msp20I TGGCCA 3 cut(s) 508, 1535, 1635
MspI CCGG 8 cut(s) 59, 93, 200, 207, 221, 234, 241, 1205
MspR9I CCNGG 2 cut(s) 1373, 1440
MunI CAATTG 1 cut(s) 390
MvaI CCWGG 2 cut(s) 1373, 1440
MwoI GCNNNNNNNGC 3 cut(s) 1352, 1361, 1406
NaeI GCCGGC 1 cut(s) 242
NarI GGCGCC 1 cut(s) 244
NcoI CCATGG 3 cut(s) 603, 786, 1185
NdeI CATATG 1 cut(s) 1348
NdeII GATC 7 cut(s) 107, 124, 453, 607, 916, 1231, 1544
NgoMIV GCCGGC 1 cut(s) 240
NheI GCTAGC 1 cut(s) 890
NlaIII CATG 9 cut(s) 122, 345, 473, 597, 607, 790, 1189, 1299, 1771
NlaIV GGNNCC 7 cut(s) 245, 497, 562, 609, 1370, 1384, 1437
NmeAIII GCCGAG 1 cut(s) 30
NmuCI GTSAC 3 cut(s) 202, 223, 229
NsbI TGCGCA 1 cut(s) 1732
NspI RCATGY 1 cut(s) 473
PaqCI CACCTGC 1 cut(s) 1329
PcsI WCGNNNNNNNCGW 1 cut(s) 168
PdiI GCCGGC 1 cut(s) 242
PfeI GAWTC 2 cut(s) 196, 217
PinAI ACCGGT 2 cut(s) 206, 233
PkrI GCNGC 5 cut(s) 91, 149, 982, 1183, 1345
PleI GAGTC 2 cut(s) 15, 655
PluTI GGCGCC 1 cut(s) 247
PpsI GAGTC 2 cut(s) 15, 655
Ppu21I YACGTR 1 cut(s) 432
PshAI GACNNNNGTC 1 cut(s) 1040
Psp6I CCWGG 2 cut(s) 1371, 1438
PspEI GGTNACC 2 cut(s) 202, 229
PspFI CCCAGC 1 cut(s) 1396
PspGI CCWGG 2 cut(s) 1371, 1438
PspN4I GGNNCC 7 cut(s) 245, 497, 562, 609, 1370, 1384, 1437
PspOMI GGGCCC 1 cut(s) 1382
PspPI GGNCC 5 cut(s) 704, 1035, 1160, 1382, 1383
PstNI CAGNNNCTG 1 cut(s) 914
PsuI RGATCY 4 cut(s) 107, 124, 607, 1231
RsaI GTAC 3 cut(s) 1023, 1174, 1671
RsaNI GTAC 3 cut(s) 1022, 1173, 1670
RseI CAYNNNNRTG 1 cut(s) 555
SaqAI TTAA 4 cut(s) 77, 384, 624, 1077
SatI GCNGC 5 cut(s) 90, 148, 981, 1182, 1344
Sau3AI GATC 7 cut(s) 107, 124, 453, 607, 916, 1231, 1544
Sau96I GGNCC 5 cut(s) 704, 1035, 1160, 1382, 1383
SchI GAGTC 2 cut(s) 16, 656
ScrFI CCNGG 2 cut(s) 1373, 1440
SduI GDGCHC 2 cut(s) 1276, 1386
SfaNI GCATC 4 cut(s) 25, 124, 534, 1057
SfcI CTRYAG 1 cut(s) 1224
SfoI GGCGCC 1 cut(s) 245
SgrAI CRCCGGYG 1 cut(s) 240
SinI GGWCC 2 cut(s) 704, 1035
SmiMI CAYNNNNRTG 1 cut(s) 555
SmlI CTYRAG 1 cut(s) 284
SmoI CTYRAG 1 cut(s) 284
SsiI CCGC 7 cut(s) 89, 193, 640, 834, 1007, 1049, 1726
SspDI GGCGCC 1 cut(s) 243
SspMI CTAG 4 cut(s) 158, 653, 891, 948
StyD4I CCNGG 2 cut(s) 1371, 1438
StyI CCWWGG 4 cut(s) 603, 786, 1185, 1703
TaaI ACNGT 6 cut(s) 51, 229, 925, 1172, 1177, 1564
TaiI ACGT 3 cut(s) 77, 434, 1662
TaqI TCGA 2 cut(s) 30, 1662
TaqII GACCGA 1 cut(s) 14
TatI WGTACW 1 cut(s) 1021
TauI GCSGC 1 cut(s) 92
TfiI GAWTC 2 cut(s) 196, 217
Tru1I TTAA 4 cut(s) 77, 384, 624, 1077
Tru9I TTAA 4 cut(s) 77, 384, 624, 1077
TscAI CASTG 5 cut(s) 259, 1096, 1128, 1162, 1362
TseFI GTSAC 3 cut(s) 202, 223, 229
TseI GCWGC 4 cut(s) 147, 980, 1181, 1343
Tsp45I GTSAC 3 cut(s) 202, 223, 229
TspGWI ACGGA 1 cut(s) 717
TspRI CASTG 5 cut(s) 259, 1096, 1128, 1162, 1362
VpaK11BI GGWCC 2 cut(s) 704, 1035
XapI RAATTY 6 cut(s) 400, 721, 938, 993, 1312, 1647
XbaI TCTAGA 1 cut(s) 157
XceI RCATGY 1 cut(s) 473
XspI CTAG 4 cut(s) 158, 653, 891, 948
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.