RchiOBHm_Chr4g0427231
ERF Family

DNA RNA polymerases superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000440
Physical Location & Seq
Forward (+)
52500212 .. 52504895
4684 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ39617

Sequence Viewer

Length: 1569 bp
ATGTGTAGGCTTTTTAGGGCTTTCGGGGTCATTCTGTACATGTTGTTTATTGAATGTGTCCAAGGTACGAGGACCATGGCTGAATATACTGCTGAGTTCTTACGCTATTCAGAGCCCAATGAACTAGGAGAAACTGAAGGTCAGAAGGTGGCTCACTATATCAGTGGGCTGAAGCCAACCATTCAGGAGAAAATTGGATTGCAAACTGTGTGGACTGTGACAGAAGCTACAAGCCTAGCATTGAAAGCAAAACTATTAGAGAAGCCTTCACGAGCTTCTTCTTTCCAAAGGTATACCTATCAAAGGAGCACAGAGTTGGTGAACTCCTTAGCTGGCAAGGGAAAAGCCATACAACAAAATACAGAGGGTGCTCCTAGGGCTTCCAATCCTCCTTTTAAAGGCGCTAGCAGTTCTAGTGGTACTCAAAATAATAGTGAATTCGAGATGGAGGAAGCCTTTAAAGAATCTGAAGTCATTTGTCCAGTGATGTTGATTTTAAGGAGATTAATTTGGGCCAAGTGCAGCAGCAATCATGCAGTTGTAGATTTCTATGTGAGTGATGGTTATTTATTCAAAGGCAATCGGCTTTGTATTCCTAGTTCATCATTGAGGGAGAAACTGATCAGAGATCTGCATGGAGGGGGTTTGAGTGGACACTTGGGCCGAGATAAAACTATTGCTAGCCTTGAGGAGAGGTATTTCTGGCCACAACTGAAGAAGGATGTAGGAGCTATTGTGAGGAAGTGCTACACCTGCCAGGTTTCTAAGGGTCAGTCCCAAAATACTAGTCTTTATTTACCTTTACCTATTCCTGAAGATATTTGGCAGGACCTTTCTATGGACTTTGTGTTGGGATTACCCTGTACCCAAAGGGGTGTGGATTCTATGTTTGTGGTAGTTGACAAGTTCTCCAAGATGGCGTACTTTATAGCTTGGAAGTCACCATTCTCATTAGTTTACACTGCTGTTCCTCGACATGTGGTTGATTTAGTGAAGCTTCCTAAAGTTCCTAGTGTTAGTGTTGCTGCTGAAGGCATGGCTAAGGATGTGCAGACTGTTAGAGAAGAAGTTAAGACCAAGTTGGAAGAAACTAATGCTAAGTATAAAGCTGCAGCTGACAAACATCGAAGAGTTAAAGTGTTCCAAGAGGGTGACGACGTGATGGTGTTTCTAAGGAAGGAGAGGTTCCCTGTTGGTACATACAACAATTTGAAGCCAAGAAAATATGGTCCTTTTAAGGTGCTGAGGAAGATCAACGACAATGCTTATGTTGTTACACTTCCTGATTCCATGGGCATTTCTAACACCTTTAATGTGGCTGATCTGCATGAGTTTCGTGAAGATGAGGTTCTTTATCTTGAAGAGAACTCGGGGTCAAGTTCTACGGAGGTGATCTTTCTGACTGCGTCATCAAAAAAACCAACATCTTGCCTCAGTATTGTTTTCAGGTATAAACATCTTATTTGTGCAGCCTGTCTCTCTCTGATGATCATCCAACTAGACATCTCTATCACATACAAAATCACAAGTAAAGTCATTAGTTTTGGAAAAGAAAGACTAGTAAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 Retrotrans_gag rve zf-H2C2

Protein Analysis

522

Amino Acids

58.76

Weight (kDa)

9.05

Isoelectric Point (pI)

33.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Integrase_H2C2 PF17921 201 - 256 2.4e-18 Integrase zinc binding domain
zf-H2C2 PF09337 219 - 253 6.8e-06 H2C2 zinc finger
SH3_Tf2-1 PF24626 384 - 445 5.4e-18 Tf2-1-like, SH3 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000440)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20313 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11420 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_2g11450 FvH4_5g25851
prunus_persica Prupe.8G072900_v2.0.a1 Prupe.8G072900_v2.0.a1 Prupe.8G072900_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G073000_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1 Prupe.8G229300_v2.0.a1
pyrus_communis pycom01g01210 pycom02g12000 pycom10g21410 pycom11g11060 pycom13g24280
rosa_chinensis RchiOBHm_Chr3g0461871 RchiOBHm_Chr4g0427221 RchiOBHm_Chr4g0427231 RchiOBHm_Chr6g0270081 RchiOBHm_Chr6g0270121 RchiOBHm_Chr6g0270151 RchiOBHm_Chr6g0270161 RchiOBHm_Chr6g0270171 RchiOBHm_Chr6g0270181 RchiOBHm_Chr6g0270191 RchiOBHm_Chr7g0229301
rosa_laevigata RLG00000013809 RLG00000013810 RLG00000013812 RLG00000013814 RLG00000013817 RLG00000013818
rosa_multiflora Rmu_sc0000918.1_g000004 Rmu_sc0000918.1_g000019 Rmu_sc0000918.1_g000027 Rmu_sc0002817.1_g000013 Rmu_sc0004366.1_g000009 Rmu_sc0004376.1_g000011 Rmu_sc0004376.1_g000014 Rmu_sc0004376.1_g000021 Rmu_sc0006909.1_g000002 Rmu_sc0011356.1_g000003 Rmu_sc0011369.1_g000005 Rmu_sc0017552.1_g000001
rosa_roxburghii Rroxscaffold_5G00354200 Rroxscaffold_7G00198080 Rroxscaffold_7G00198090 Rroxscaffold_7G00198100 Rroxscaffold_7G00198130 Rroxscaffold_7G00198170
rosa_rugosa Rorug06G0052400 Rorug06G0052500 Rorug06G0053000
rosa_samantha Rh6AG171300 Rh6AG171400 Rh6AG171800 Rh6AG171900 Rh6AG172000 Rh6AG172100 Rh6AG369700 Rh6BG175800 Rh6BG175900 Rh6BG176200 Rh6BG176300 Rh6CG170900 Rh6CG171100 Rh6CG171400 Rh6CG171500 Rh6CG171700 Rh6CG171900 Rh6CG172000 Rh6CG172100
rosa_wichuraiana Rw6G014730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 761
Acc36I ACCTGC 1 cut(s) 761
AccI GTMKAC 1 cut(s) 293
AcoI YGGCCR 1 cut(s) 704
AcsI RAATTY 1 cut(s) 437
AcuI CTGAAG 6 cut(s) 156, 191, 489, 734, 834, 1050
AfaI GTAC 6 cut(s) 38, 67, 421, 865, 923, 1198
AfiI CCNNNNNNNGG 3 cut(s) 303, 398, 838
AflIII ACRYGT 2 cut(s) 39, 976
AgsI TTSAA 5 cut(s) 53, 244, 574, 1213, 1361
AhlI ACTAGT 2 cut(s) 785, 1558
AjiI CACGTC 1 cut(s) 1159
AjnI CCWGG 1 cut(s) 756
AluBI AGCT 8 cut(s) 227, 275, 332, 731, 932, 997, 1109, 1115
AluI AGCT 8 cut(s) 227, 275, 332, 731, 932, 997, 1109, 1115
Alw21I GWGCWC 2 cut(s) 311, 373
Alw26I GTCTC 1 cut(s) 1481
Ama87I CYCGRG 1 cut(s) 1369
AoxI GGCC 3 cut(s) 513, 661, 704
ApeKI GCWGC 6 cut(s) 522, 525, 1025, 1109, 1112, 1469
ApoI RAATTY 1 cut(s) 437
ArsI GACNNNNNNTTYG 2 cut(s) 772, 804
AseI ATTAAT 1 cut(s) 506
AspA2I CCTAGG 1 cut(s) 374
AspLEI GCGC 1 cut(s) 404
AspS9I GGNCC 5 cut(s) 72, 513, 661, 829, 1229
AsuHPI GGTGA 4 cut(s) 331, 933, 1163, 1402
AsuNHI GCTAGC 2 cut(s) 404, 680
AvaI CYCGRG 1 cut(s) 1369
AvaII GGWCC 3 cut(s) 72, 829, 1229
AvrII CCTAGG 1 cut(s) 374
BalI TGGCCA 1 cut(s) 706
BanII GRGCYC 1 cut(s) 117
BauI CACGAG 1 cut(s) 270
Bbv12I GWGCWC 2 cut(s) 311, 373
BbvCI CCTCAGC 1 cut(s) 1244
BbvI GCAGC 6 cut(s) 534, 537, 1012, 1096, 1124, 1481
BccI CCATC 4 cut(s) 439, 554, 910, 1156
BcgI CGANNNNNNTGC 2 cut(s) 1316, 1350
BciT130I CCWGG 1 cut(s) 758
BclI TGATCA 2 cut(s) 621, 1488
BcoDI GTCTC 1 cut(s) 1481
BcuI ACTAGT 2 cut(s) 785, 1558
BfmI CTRYAG 1 cut(s) 1110
BfoI RGCGCY 1 cut(s) 405
BfuAI ACCTGC 1 cut(s) 761
BglII AGATCT 1 cut(s) 628
BisI GCNGC 6 cut(s) 523, 526, 1026, 1110, 1113, 1470
BlnI CCTAGG 1 cut(s) 374
BlsI GCNGC 6 cut(s) 524, 527, 1027, 1111, 1114, 1471
Bme1390I CCNGG 1 cut(s) 758
Bme18I GGWCC 3 cut(s) 72, 829, 1229
BmeT110I CYCGRG 1 cut(s) 1369
BmgBI CACGTC 1 cut(s) 1159
BmgT120I GGNCC 5 cut(s) 72, 513, 661, 829, 1229
BmiI GGNNCC 1 cut(s) 1187
BmrFI CCNGG 1 cut(s) 758
BmtI GCTAGC 2 cut(s) 408, 684
Bpu10I CCTNAGC 3 cut(s) 328, 1041, 1244
BpuEI CTTGAG 1 cut(s) 707
BsaBI GATNNNNATC 1 cut(s) 1490
BsaJI CCNNGG 4 cut(s) 61, 75, 374, 1290
BsaXI ACNNNNNCTCC 4 cut(s) 720, 750, 893, 923
Bsc4I CCNNNNNNNGG 3 cut(s) 303, 398, 838
Bse1I ACTGG 1 cut(s) 482
Bse8I GATNNNNATC 1 cut(s) 1490
BseBI CCWGG 1 cut(s) 758
BseDI CCNNGG 4 cut(s) 61, 75, 374, 1290
BseGI GGATG 3 cut(s) 727, 1051, 1491
BseJI GATNNNNATC 1 cut(s) 1490
BseLI CCNNNNNNNGG 3 cut(s) 303, 398, 838
BseMII CTCAG 3 cut(s) 84, 1235, 1447
BseNI ACTGG 1 cut(s) 482
BseRI GAGGAG 1 cut(s) 704
BseXI GCAGC 6 cut(s) 534, 537, 1012, 1096, 1124, 1481
BsgI GTGCAG 3 cut(s) 541, 1070, 1488
BshFI GGCC 3 cut(s) 515, 663, 706
BsiHKAI GWGCWC 2 cut(s) 311, 373
BsiHKCI CYCGRG 1 cut(s) 1369
BslFI GGGAC 1 cut(s) 760
BslI CCNNNNNNNGG 3 cut(s) 303, 398, 838
BsmAI GTCTC 1 cut(s) 1481
BsmFI GGGAC 1 cut(s) 760
BsnI GGCC 3 cut(s) 515, 663, 706
BsoBI CYCGRG 1 cut(s) 1369
Bsp1286I GDGCHC 3 cut(s) 117, 311, 373
Bsp1407I TGTACA 1 cut(s) 36
Bsp143I GATC 6 cut(s) 621, 628, 1251, 1321, 1392, 1488
Bsp19I CCATGG 2 cut(s) 75, 1290
BspANI GGCC 3 cut(s) 515, 663, 706
BspCNI CTCAG 3 cut(s) 85, 1236, 1446
BspLI GGNNCC 1 cut(s) 1187
BspMAI CTGCAG 1 cut(s) 1114
BspMI ACCTGC 1 cut(s) 761
BspOI GCTAGC 2 cut(s) 408, 684
BsrGI TGTACA 1 cut(s) 36
BsrI ACTGG 1 cut(s) 482
BssECI CCNNGG 4 cut(s) 61, 75, 374, 1290
BssMI GATC 6 cut(s) 621, 628, 1251, 1321, 1392, 1488
BssNAI GTATAC 1 cut(s) 294
BssSI CACGAG 1 cut(s) 270
BssT1I CCWWGG 4 cut(s) 61, 75, 374, 1290
Bst1107I GTATAC 1 cut(s) 294
Bst2BI CACGAG 1 cut(s) 270
Bst2UI CCWGG 1 cut(s) 758
Bst4CI ACNGT 3 cut(s) 208, 217, 1057
Bst6I CTCTTC 2 cut(s) 1123, 1356
BstAUI TGTACA 1 cut(s) 36
BstC8I GCNNGC 3 cut(s) 334, 406, 682
BstDEI CTNAG 8 cut(s) 93, 328, 765, 1041, 1098, 1172, 1244, 1433
BstDSI CCRYGG 2 cut(s) 75, 1290
BstENI CCTNNNNNAGG 2 cut(s) 301, 396
BstF5I GGATG 3 cut(s) 727, 1051, 1491
BstH2I RGCGCY 1 cut(s) 405
BstHHI GCGC 1 cut(s) 404
BstKTI GATC 6 cut(s) 624, 631, 1254, 1324, 1395, 1491
BstMAI GTCTC 1 cut(s) 1481
BstMBI GATC 6 cut(s) 621, 628, 1251, 1321, 1392, 1488
BstMWI GCNNNNNNNGC 3 cut(s) 245, 377, 753
BstNI CCWGG 1 cut(s) 758
BstNSI RCATGY 2 cut(s) 43, 980
BstSCI CCNGG 1 cut(s) 756
BstSFI CTRYAG 1 cut(s) 1110
BstV1I GCAGC 6 cut(s) 534, 537, 1012, 1096, 1124, 1481
BstX2I RGATCY 1 cut(s) 628
BstYI RGATCY 1 cut(s) 628
BstZ17I GTATAC 1 cut(s) 294
BsuRI GGCC 3 cut(s) 515, 663, 706
BtgI CCRYGG 2 cut(s) 75, 1290
BtrI CACGTC 1 cut(s) 1159
BtsCI GGATG 3 cut(s) 727, 1051, 1491
BtsI GCAGTG 1 cut(s) 960
BtsIMutI CAGTG 3 cut(s) 169, 489, 960
BveI ACCTGC 1 cut(s) 761
Cac8I GCNNGC 3 cut(s) 334, 406, 682
CfoI GCGC 1 cut(s) 404
Cfr13I GGNCC 5 cut(s) 72, 513, 661, 829, 1229
CseI GACGC 1 cut(s) 1395
Csp6I GTAC 6 cut(s) 37, 66, 420, 864, 922, 1197
CspCI CAANNNNNGTGG 2 cut(s) 191, 226
CviAII CATG 8 cut(s) 40, 76, 533, 635, 977, 1036, 1291, 1328
CviQI GTAC 6 cut(s) 37, 66, 420, 864, 922, 1197
DdeI CTNAG 8 cut(s) 93, 328, 765, 1041, 1098, 1172, 1244, 1433
DpnI GATC 6 cut(s) 623, 630, 1253, 1323, 1394, 1490
DpnII GATC 6 cut(s) 621, 628, 1251, 1321, 1392, 1488
DraI TTTAAA 2 cut(s) 397, 460
EaeI YGGCCR 1 cut(s) 704
Eam1104I CTCTTC 2 cut(s) 1123, 1356
EarI CTCTTC 2 cut(s) 1123, 1356
Eco130I CCWWGG 4 cut(s) 61, 75, 374, 1290
Eco24I GRGCYC 1 cut(s) 117
Eco47I GGWCC 3 cut(s) 72, 829, 1229
Eco57I CTGAAG 6 cut(s) 156, 191, 489, 734, 834, 1050
Eco88I CYCGRG 1 cut(s) 1369
EcoNI CCTNNNNNAGG 2 cut(s) 301, 396
EcoO109I RGGNCCY 1 cut(s) 829
EcoRI GAATTC 1 cut(s) 437
EcoRII CCWGG 1 cut(s) 756
EcoT14I CCWWGG 4 cut(s) 61, 75, 374, 1290
EcoT38I GRGCYC 1 cut(s) 117
ErhI CCWWGG 4 cut(s) 61, 75, 374, 1290
FaeI CATG 8 cut(s) 43, 79, 536, 638, 980, 1039, 1294, 1331
FaqI GGGAC 1 cut(s) 760
FatI CATG 8 cut(s) 39, 75, 532, 634, 976, 1035, 1290, 1327
FbaI TGATCA 2 cut(s) 621, 1488
FblI GTMKAC 1 cut(s) 293
Fnu4HI GCNGC 6 cut(s) 523, 526, 1026, 1110, 1113, 1470
FokI GGATG 3 cut(s) 734, 1058, 1478
FriOI GRGCYC 1 cut(s) 117
Fsp4HI GCNGC 6 cut(s) 523, 526, 1026, 1110, 1113, 1470
GlaI GCGC 1 cut(s) 403
GluI GCNGC 6 cut(s) 523, 526, 1026, 1110, 1113, 1470
HaeII RGCGCY 1 cut(s) 405
HaeIII GGCC 3 cut(s) 515, 663, 706
HgaI GACGC 1 cut(s) 1395
HhaI GCGC 1 cut(s) 404
Hin1II CATG 8 cut(s) 43, 79, 536, 638, 980, 1039, 1294, 1331
Hin6I GCGC 1 cut(s) 402
HinP1I GCGC 1 cut(s) 402
HincII GTYRAC 1 cut(s) 901
HindII GTYRAC 1 cut(s) 901
HindIII AAGCTT 1 cut(s) 995
HinfI GANTC 3 cut(s) 464, 881, 1286
HphI GGTGA 4 cut(s) 331, 933, 1163, 1402
Hpy166II GTNNAC 6 cut(s) 213, 294, 322, 653, 901, 958
Hpy188I TCNGA 6 cut(s) 112, 144, 469, 626, 1401, 1485
Hpy188III TCNNGA 7 cut(s) 185, 270, 442, 812, 1283, 1337, 1358
Hpy8I GTNNAC 6 cut(s) 213, 294, 322, 653, 901, 958
Hpy99I CGWCG 1 cut(s) 1160
HpyAV CCTTC 6 cut(s) 131, 139, 276, 712, 1025, 1171
HpyCH4III ACNGT 3 cut(s) 208, 217, 1057
HpyCH4IV ACGT 1 cut(s) 1158
HpyCH4V TGCA 8 cut(s) 202, 522, 536, 634, 1051, 1112, 1327, 1469
HpyF10VI GCNNNNNNNGC 3 cut(s) 245, 377, 753
HpyF3I CTNAG 8 cut(s) 93, 328, 765, 1041, 1098, 1172, 1244, 1433
HpySE526I ACGT 1 cut(s) 1158
Hsp92II CATG 8 cut(s) 43, 79, 536, 638, 980, 1039, 1294, 1331
HspAI GCGC 1 cut(s) 402
Ksp22I TGATCA 2 cut(s) 621, 1488
Kzo9I GATC 6 cut(s) 621, 628, 1251, 1321, 1392, 1488
LmnI GCTCC 3 cut(s) 306, 376, 728
Lsp1109I GCAGC 6 cut(s) 534, 537, 1012, 1096, 1124, 1481
MaeII ACGT 1 cut(s) 1158
MaeIII GTNAC 4 cut(s) 217, 939, 1151, 1273
MalI GATC 6 cut(s) 623, 630, 1253, 1323, 1394, 1490
MboI GATC 6 cut(s) 621, 628, 1251, 1321, 1392, 1488
MboII GAAGA 9 cut(s) 270, 727, 827, 1076, 1097, 1140, 1261, 1352, 1373
MflI RGATCY 1 cut(s) 628
MhlI GDGCHC 3 cut(s) 117, 311, 373
MlsI TGGCCA 1 cut(s) 706
MluCI AATT 5 cut(s) 192, 437, 507, 1207, 1564
MluNI TGGCCA 1 cut(s) 706
MmeI TCCRAC 2 cut(s) 1062, 1519
Mox20I TGGCCA 1 cut(s) 706
MscI TGGCCA 1 cut(s) 706
MseI TTAA 8 cut(s) 396, 459, 497, 506, 1071, 1134, 1236, 1311
Msp20I TGGCCA 1 cut(s) 706
MspA1I CMGCKG 1 cut(s) 1115
MspR9I CCNGG 1 cut(s) 758
MvaI CCWGG 1 cut(s) 758
MwoI GCNNNNNNNGC 3 cut(s) 245, 377, 753
NcoI CCATGG 2 cut(s) 75, 1290
NdeII GATC 6 cut(s) 621, 628, 1251, 1321, 1392, 1488
NheI GCTAGC 2 cut(s) 404, 680
NlaIII CATG 8 cut(s) 43, 79, 536, 638, 980, 1039, 1294, 1331
NlaIV GGNNCC 1 cut(s) 1187
NmeAIII GCCGAG 1 cut(s) 689
NmuCI GTSAC 3 cut(s) 217, 939, 1151
NspI RCATGY 2 cut(s) 43, 980
PaqCI CACCTGC 1 cut(s) 761
PciI ACATGT 2 cut(s) 39, 976
PfeI GAWTC 3 cut(s) 464, 881, 1286
PflFI GACNNNGTC 1 cut(s) 1405
PkrI GCNGC 6 cut(s) 524, 527, 1027, 1111, 1114, 1471
PpuMI RGGWCCY 1 cut(s) 829
PscI ACATGT 2 cut(s) 39, 976
PshBI ATTAAT 1 cut(s) 506
Psp5II RGGWCCY 1 cut(s) 829
Psp6I CCWGG 1 cut(s) 756
PspGI CCWGG 1 cut(s) 756
PspN4I GGNNCC 1 cut(s) 1187
PspPI GGNCC 5 cut(s) 72, 513, 661, 829, 1229
PspPPI RGGWCCY 1 cut(s) 829
PsrI GAACNNNNNNTAC 2 cut(s) 583, 615
PstI CTGCAG 1 cut(s) 1114
PsuI RGATCY 1 cut(s) 628
PsyI GACNNNGTC 1 cut(s) 1405
PvuII CAGCTG 1 cut(s) 1115
RsaI GTAC 6 cut(s) 38, 67, 421, 865, 923, 1198
RsaNI GTAC 6 cut(s) 37, 66, 420, 864, 922, 1197
SaqAI TTAA 8 cut(s) 396, 459, 497, 506, 1071, 1134, 1236, 1311
SatI GCNGC 6 cut(s) 523, 526, 1026, 1110, 1113, 1470
Sau3AI GATC 6 cut(s) 621, 628, 1251, 1321, 1392, 1488
Sau96I GGNCC 5 cut(s) 72, 513, 661, 829, 1229
ScrFI CCNGG 1 cut(s) 758
SduI GDGCHC 3 cut(s) 117, 311, 373
SfcI CTRYAG 1 cut(s) 1110
SinI GGWCC 3 cut(s) 72, 829, 1229
SmlI CTYRAG 1 cut(s) 686
SmoI CTYRAG 1 cut(s) 686
SpeI ACTAGT 2 cut(s) 785, 1558
Sse9I AATT 5 cut(s) 192, 437, 507, 1207, 1564
StyD4I CCNGG 1 cut(s) 756
StyI CCWWGG 4 cut(s) 61, 75, 374, 1290
TaaI ACNGT 3 cut(s) 208, 217, 1057
TaiI ACGT 1 cut(s) 1161
TaqI TCGA 3 cut(s) 441, 973, 1126
TasI AATT 5 cut(s) 192, 437, 507, 1207, 1564
TatI WGTACW 1 cut(s) 36
TfiI GAWTC 3 cut(s) 464, 881, 1286
Tru1I TTAA 8 cut(s) 396, 459, 497, 506, 1071, 1134, 1236, 1311
Tru9I TTAA 8 cut(s) 396, 459, 497, 506, 1071, 1134, 1236, 1311
TscAI CASTG 3 cut(s) 169, 489, 967
TseFI GTSAC 3 cut(s) 217, 939, 1151
TseI GCWGC 6 cut(s) 522, 525, 1025, 1109, 1112, 1469
Tsp45I GTSAC 3 cut(s) 217, 939, 1151
TspDTI ATGAA 2 cut(s) 135, 591
TspGWI ACGGA 1 cut(s) 1400
TspRI CASTG 3 cut(s) 169, 489, 967
Tth111I GACNNNGTC 1 cut(s) 1405
VpaK11BI GGWCC 3 cut(s) 72, 829, 1229
VspI ATTAAT 1 cut(s) 506
XagI CCTNNNNNAGG 2 cut(s) 301, 396
XapI RAATTY 1 cut(s) 437
XceI RCATGY 2 cut(s) 43, 980
XmaJI CCTAGG 1 cut(s) 374
XmiI GTMKAC 1 cut(s) 293
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.