gag-polypeptide of LTR copia-type
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Retrotran_gag_2 | PF14223 | 35 - 217 | 1.1e-25 | gag-polypeptide of LTR copia-type |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1392 |
| AatII | GACGTC | 1 cut(s) | 490 |
| Acc36I | ACCTGC | 3 cut(s) | 1648, 1660, 1869 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1903 |
| AccBSI | CCGCTC | 1 cut(s) | 2442 |
| AccI | GTMKAC | 1 cut(s) | 2427 |
| AccII | CGCG | 1 cut(s) | 2411 |
| AclWI | GGATC | 2 cut(s) | 1002, 1284 |
| AcoI | YGGCCR | 2 cut(s) | 949, 1441 |
| AcsI | RAATTY | 7 cut(s) | 519, 749, 775, 838, 1370, 1630, 1793 |
| AcuI | CTGAAG | 2 cut(s) | 641, 729 |
| AcyI | GRCGYC | 1 cut(s) | 487 |
| AfaI | GTAC | 5 cut(s) | 545, 667, 1004, 1137, 2406 |
| AfeI | AGCGCT | 1 cut(s) | 1918 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 1351, 1486, 1903, 1974, 2170, 2249, 2283 |
| AgeI | ACCGGT | 1 cut(s) | 2140 |
| AjnI | CCWGG | 2 cut(s) | 1730, 1998 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2061, 2093 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1421, 1453 |
| Alw21I | GWGCWC | 5 cut(s) | 1460, 1784, 2088, 2178, 2338 |
| Alw26I | GTCTC | 3 cut(s) | 700, 1851, 2154 |
| Alw44I | GTGCAC | 1 cut(s) | 2174 |
| AlwI | GGATC | 2 cut(s) | 1002, 1284 |
| Ama87I | CYCGRG | 1 cut(s) | 1872 |
| Aor51HI | AGCGCT | 1 cut(s) | 1918 |
| AoxI | GGCC | 3 cut(s) | 949, 1441, 1881 |
| ApaLI | GTGCAC | 1 cut(s) | 2174 |
| ApeKI | GCWGC | 9 cut(s) | 263, 1160, 1914, 1919, 1922, 1925, 2253, 2297, 2324 |
| ApoI | RAATTY | 7 cut(s) | 519, 749, 775, 838, 1370, 1630, 1793 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 965, 997 |
| AsiGI | ACCGGT | 1 cut(s) | 2140 |
| AspLEI | GCGC | 1 cut(s) | 1919 |
| AspS9I | GGNCC | 3 cut(s) | 1672, 1728, 2290 |
| AsuC2I | CCSGG | 3 cut(s) | 1975, 2171, 2285 |
| AsuHPI | GGTGA | 5 cut(s) | 866, 1718, 1727, 2080, 2130 |
| AsuII | TTCGAA | 1 cut(s) | 843 |
| AvaI | CYCGRG | 1 cut(s) | 1872 |
| AvaII | GGWCC | 3 cut(s) | 1672, 1728, 2290 |
| AxyI | CCTNAGG | 1 cut(s) | 2394 |
| BaeGI | GKGCMC | 1 cut(s) | 2178 |
| BalI | TGGCCA | 1 cut(s) | 951 |
| BanII | GRGCYC | 3 cut(s) | 1460, 1784, 2338 |
| BbsI | GAAGAC | 2 cut(s) | 1065, 1437 |
| Bbv12I | GWGCWC | 5 cut(s) | 1460, 1784, 2088, 2178, 2338 |
| BbvCI | CCTCAGC | 1 cut(s) | 1878 |
| BbvI | GCAGC | 9 cut(s) | 250, 1147, 1906, 1909, 1912, 1926, 2265, 2284, 2311 |
| BccI | CCATC | 5 cut(s) | 146, 1712, 1897, 2233, 2355 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1853, 1887, 2065, 2099 |
| BciT130I | CCWGG | 2 cut(s) | 1732, 2000 |
| BcnI | CCSGG | 3 cut(s) | 1975, 2171, 2285 |
| BcoDI | GTCTC | 3 cut(s) | 700, 1851, 2154 |
| BfaI | CTAG | 3 cut(s) | 465, 2205, 2470 |
| BfmI | CTRYAG | 2 cut(s) | 1161, 1788 |
| BfoI | RGCGCY | 1 cut(s) | 1920 |
| BfuAI | ACCTGC | 3 cut(s) | 1648, 1660, 1869 |
| BglII | AGATCT | 2 cut(s) | 527, 1508 |
| Bme1390I | CCNGG | 5 cut(s) | 1732, 1975, 2000, 2171, 2285 |
| Bme18I | GGWCC | 3 cut(s) | 1672, 1728, 2290 |
| BmeT110I | CYCGRG | 1 cut(s) | 1872 |
| BmgT120I | GGNCC | 3 cut(s) | 1672, 1728, 2290 |
| BmiI | GGNNCC | 1 cut(s) | 2400 |
| BmrFI | CCNGG | 5 cut(s) | 1732, 1975, 2000, 2171, 2285 |
| BmsI | GCATC | 2 cut(s) | 391, 2106 |
| BpiI | GAAGAC | 2 cut(s) | 1065, 1437 |
| BpmI | CTGGAG | 1 cut(s) | 147 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1878 |
| Bpu14I | TTCGAA | 1 cut(s) | 843 |
| BpuEI | CTTGAG | 4 cut(s) | 1262, 1271, 2094, 2343 |
| BpuMI | CCSGG | 3 cut(s) | 1975, 2171, 2285 |
| BsaHI | GRCGYC | 1 cut(s) | 487 |
| BsaI | GGTCTC | 1 cut(s) | 1851 |
| BsaJI | CCNNGG | 6 cut(s) | 1731, 1815, 1830, 1998, 2169, 2380 |
| BsaWI | WCCGGW | 1 cut(s) | 2140 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 1351, 1486, 1903, 1974, 2170, 2249, 2283 |
| Bse118I | RCCGGY | 1 cut(s) | 2140 |
| Bse1I | ACTGG | 5 cut(s) | 889, 1173, 1444, 1663, 2070 |
| Bse21I | CCTNAGG | 1 cut(s) | 2394 |
| Bse3DI | GCAATG | 2 cut(s) | 954, 2271 |
| BseBI | CCWGG | 2 cut(s) | 1732, 2000 |
| BseDI | CCNNGG | 6 cut(s) | 1731, 1815, 1830, 1998, 2169, 2380 |
| BseGI | GGATG | 4 cut(s) | 157, 211, 1912, 2189 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 1351, 1486, 1903, 1974, 2170, 2249, 2283 |
| BseMI | GCAATG | 2 cut(s) | 954, 2271 |
| BseMII | CTCAG | 7 cut(s) | 129, 215, 708, 1767, 1869, 2066, 2408 |
| BseNI | ACTGG | 5 cut(s) | 889, 1173, 1444, 1663, 2070 |
| BseRI | GAGGAG | 3 cut(s) | 1286, 2170, 2226 |
| BseSI | GKGCMC | 1 cut(s) | 2178 |
| BseXI | GCAGC | 9 cut(s) | 250, 1147, 1906, 1909, 1912, 1926, 2265, 2284, 2311 |
| BseYI | CCCAGC | 1 cut(s) | 2220 |
| BsgI | GTGCAG | 1 cut(s) | 1622 |
| Bsh1236I | CGCG | 1 cut(s) | 2411 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2431 |
| BshFI | GGCC | 3 cut(s) | 951, 1443, 1883 |
| BshTI | ACCGGT | 1 cut(s) | 2140 |
| BsiEI | CGRYCG | 1 cut(s) | 2431 |
| BsiHKAI | GWGCWC | 5 cut(s) | 1460, 1784, 2088, 2178, 2338 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1872 |
| BsiSI | CCGG | 5 cut(s) | 1975, 2141, 2171, 2284, 2437 |
| BslFI | GGGAC | 1 cut(s) | 498 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 1351, 1486, 1903, 1974, 2170, 2249, 2283 |
| BsmAI | GTCTC | 3 cut(s) | 700, 1851, 2154 |
| BsmBI | CGTCTC | 1 cut(s) | 2154 |
| BsmFI | GGGAC | 1 cut(s) | 498 |
| BsmI | GAATGC | 2 cut(s) | 759, 1215 |
| BsnI | GGCC | 3 cut(s) | 951, 1443, 1883 |
| Bso31I | GGTCTC | 1 cut(s) | 1851 |
| BsoBI | CYCGRG | 1 cut(s) | 1872 |
| Bsp119I | TTCGAA | 1 cut(s) | 843 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1460, 1784, 2088, 2178, 2338 |
| Bsp19I | CCATGG | 1 cut(s) | 1830 |
| BspANI | GGCC | 3 cut(s) | 951, 1443, 1883 |
| BspCNI | CTCAG | 7 cut(s) | 130, 216, 709, 1768, 1870, 2065, 2407 |
| BspFNI | CGCG | 1 cut(s) | 2411 |
| BspHI | TCATGA | 3 cut(s) | 343, 2035, 2341 |
| BspLI | GGNNCC | 1 cut(s) | 2400 |
| BspMAI | CTGCAG | 2 cut(s) | 1165, 1792 |
| BspMI | ACCTGC | 3 cut(s) | 1648, 1660, 1869 |
| BspPI | GGATC | 2 cut(s) | 1002, 1284 |
| BspQI | GCTCTTC | 1 cut(s) | 2460 |
| BspT104I | TTCGAA | 1 cut(s) | 843 |
| BspTNI | GGTCTC | 1 cut(s) | 1851 |
| BsrBI | CCGCTC | 1 cut(s) | 2442 |
| BsrDI | GCAATG | 2 cut(s) | 954, 2271 |
| BsrFI | RCCGGY | 1 cut(s) | 2140 |
| BsrI | ACTGG | 5 cut(s) | 889, 1173, 1444, 1663, 2070 |
| BssAI | RCCGGY | 1 cut(s) | 2140 |
| BssECI | CCNNGG | 6 cut(s) | 1731, 1815, 1830, 1998, 2169, 2380 |
| BssNI | GRCGYC | 1 cut(s) | 487 |
| BssT1I | CCWWGG | 3 cut(s) | 1815, 1830, 2380 |
| Bst2UI | CCWGG | 2 cut(s) | 1732, 2000 |
| Bst4CI | ACNGT | 3 cut(s) | 968, 1948, 2432 |
| Bst6I | CTCTTC | 7 cut(s) | 537, 705, 1344, 1849, 2188, 2244, 2460 |
| BstACI | GRCGYC | 1 cut(s) | 487 |
| BstBI | TTCGAA | 1 cut(s) | 843 |
| BstC8I | GCNNGC | 4 cut(s) | 2251, 2268, 2334, 2444 |
| BstDSI | CCRYGG | 1 cut(s) | 1830 |
| BstF5I | GGATG | 4 cut(s) | 157, 211, 1912, 2189 |
| BstFNI | CGCG | 1 cut(s) | 2411 |
| BstH2I | RGCGCY | 1 cut(s) | 1920 |
| BstHHI | GCGC | 1 cut(s) | 1919 |
| BstMAI | GTCTC | 3 cut(s) | 700, 1851, 2154 |
| BstMCI | CGRYCG | 1 cut(s) | 2431 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 251, 260, 1925, 1928, 1931, 2125, 2153, 2321, 2333 |
| BstNI | CCWGG | 2 cut(s) | 1732, 2000 |
| BstNSI | RCATGY | 1 cut(s) | 2270 |
| BstSCI | CCNGG | 5 cut(s) | 1730, 1973, 1998, 2169, 2283 |
| BstSFI | CTRYAG | 2 cut(s) | 1161, 1788 |
| BstSLI | GKGCMC | 1 cut(s) | 2178 |
| BstUI | CGCG | 1 cut(s) | 2411 |
| BstV1I | GCAGC | 9 cut(s) | 250, 1147, 1906, 1909, 1912, 1926, 2265, 2284, 2311 |
| BstV2I | GAAGAC | 2 cut(s) | 1065, 1437 |
| BstX2I | RGATCY | 3 cut(s) | 527, 1007, 1508 |
| BstYI | RGATCY | 3 cut(s) | 527, 1007, 1508 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2394 |
| BsuRI | GGCC | 3 cut(s) | 951, 1443, 1883 |
| BtgI | CCRYGG | 1 cut(s) | 1830 |
| BtsCI | GGATG | 4 cut(s) | 157, 211, 1912, 2189 |
| BveI | ACCTGC | 3 cut(s) | 1648, 1660, 1869 |
| Cac8I | GCNNGC | 4 cut(s) | 2251, 2268, 2334, 2444 |
| CciI | TCATGA | 3 cut(s) | 343, 2035, 2341 |
| CfoI | GCGC | 1 cut(s) | 1919 |
| Cfr10I | RCCGGY | 1 cut(s) | 2140 |
| Cfr13I | GGNCC | 3 cut(s) | 1672, 1728, 2290 |
| CseI | GACGC | 2 cut(s) | 1877, 2136 |
| Csp6I | GTAC | 5 cut(s) | 544, 666, 1003, 1136, 2405 |
| CspAI | ACCGGT | 1 cut(s) | 2140 |
| CviQI | GTAC | 5 cut(s) | 544, 666, 1003, 1136, 2405 |
| DraI | TTTAAA | 3 cut(s) | 495, 754, 1576 |
| EaeI | YGGCCR | 2 cut(s) | 949, 1441 |
| Eam1104I | CTCTTC | 7 cut(s) | 537, 705, 1344, 1849, 2188, 2244, 2460 |
| EarI | CTCTTC | 7 cut(s) | 537, 705, 1344, 1849, 2188, 2244, 2460 |
| EciI | GGCGGA | 1 cut(s) | 1442 |
| Ecl136II | GAGCTC | 3 cut(s) | 1458, 1782, 2336 |
| Eco130I | CCWWGG | 3 cut(s) | 1815, 1830, 2380 |
| Eco24I | GRGCYC | 3 cut(s) | 1460, 1784, 2338 |
| Eco31I | GGTCTC | 1 cut(s) | 1851 |
| Eco47I | GGWCC | 3 cut(s) | 1672, 1728, 2290 |
| Eco47III | AGCGCT | 1 cut(s) | 1918 |
| Eco53kI | GAGCTC | 3 cut(s) | 1458, 1782, 2336 |
| Eco57I | CTGAAG | 2 cut(s) | 641, 729 |
| Eco81I | CCTNAGG | 1 cut(s) | 2394 |
| Eco88I | CYCGRG | 1 cut(s) | 1872 |
| EcoICRI | GAGCTC | 3 cut(s) | 1458, 1782, 2336 |
| EcoRII | CCWGG | 2 cut(s) | 1730, 1998 |
| EcoT14I | CCWWGG | 3 cut(s) | 1815, 1830, 2380 |
| EcoT22I | ATGCAT | 1 cut(s) | 106 |
| EcoT38I | GRGCYC | 3 cut(s) | 1460, 1784, 2338 |
| ErhI | CCWWGG | 3 cut(s) | 1815, 1830, 2380 |
| Esp3I | CGTCTC | 1 cut(s) | 2154 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2103, 2135, 2352, 2384 |
| FaqI | GGGAC | 1 cut(s) | 498 |
| FauI | CCCGC | 2 cut(s) | 2416, 2435 |
| FblI | GTMKAC | 1 cut(s) | 2427 |
| FokI | GGATG | 4 cut(s) | 164, 218, 1919, 2176 |
| FriOI | GRGCYC | 3 cut(s) | 1460, 1784, 2338 |
| FspBI | CTAG | 3 cut(s) | 465, 2205, 2470 |
| GlaI | GCGC | 1 cut(s) | 1918 |
| GsaI | CCCAGC | 1 cut(s) | 2224 |
| GsuI | CTGGAG | 1 cut(s) | 147 |
| HaeII | RGCGCY | 1 cut(s) | 1920 |
| HaeIII | GGCC | 3 cut(s) | 951, 1443, 1883 |
| HapII | CCGG | 5 cut(s) | 1975, 2141, 2171, 2284, 2437 |
| HgaI | GACGC | 2 cut(s) | 1877, 2136 |
| HhaI | GCGC | 1 cut(s) | 1919 |
| Hin1I | GRCGYC | 1 cut(s) | 487 |
| Hin6I | GCGC | 1 cut(s) | 1917 |
| HinP1I | GCGC | 1 cut(s) | 1917 |
| HincII | GTYRAC | 1 cut(s) | 2428 |
| HindII | GTYRAC | 1 cut(s) | 2428 |
| HindIII | AAGCTT | 2 cut(s) | 478, 2313 |
| HpaII | CCGG | 5 cut(s) | 1975, 2141, 2171, 2284, 2437 |
| HphI | GGTGA | 5 cut(s) | 866, 1718, 1727, 2080, 2130 |
| Hpy166II | GTNNAC | 2 cut(s) | 2176, 2428 |
| Hpy8I | GTNNAC | 2 cut(s) | 2176, 2428 |
| Hpy99I | CGWCG | 5 cut(s) | 565, 1848, 1952, 2436, 2463 |
| HpyAV | CCTTC | 7 cut(s) | 161, 283, 341, 616, 1331, 1764, 1978 |
| HpyCH4III | ACNGT | 3 cut(s) | 968, 1948, 2432 |
| HpyCH4IV | ACGT | 3 cut(s) | 121, 487, 2041 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 251, 260, 1925, 1928, 1931, 2125, 2153, 2321, 2333 |
| HpySE526I | ACGT | 3 cut(s) | 121, 487, 2041 |
| Hsp92I | GRCGYC | 1 cut(s) | 487 |
| HspAI | GCGC | 1 cut(s) | 1917 |
| LguI | GCTCTTC | 1 cut(s) | 2460 |
| LmnI | GCTCC | 4 cut(s) | 139, 166, 571, 2439 |
| Lsp1109I | GCAGC | 9 cut(s) | 250, 1147, 1906, 1909, 1912, 1926, 2265, 2284, 2311 |
| LweI | GCATC | 2 cut(s) | 391, 2106 |
| MaeI | CTAG | 3 cut(s) | 465, 2205, 2470 |
| MaeII | ACGT | 3 cut(s) | 121, 487, 2041 |
| MaeIII | GTNAC | 4 cut(s) | 304, 375, 732, 1942 |
| MbiI | CCGCTC | 1 cut(s) | 2442 |
| MflI | RGATCY | 3 cut(s) | 527, 1007, 1508 |
| MhlI | GDGCHC | 5 cut(s) | 1460, 1784, 2088, 2178, 2338 |
| MlsI | TGGCCA | 1 cut(s) | 951 |
| MluNI | TGGCCA | 1 cut(s) | 951 |
| MlyI | GAGTC | 1 cut(s) | 722 |
| MmeI | TCCRAC | 1 cut(s) | 1816 |
| Mox20I | TGGCCA | 1 cut(s) | 951 |
| Mph1103I | ATGCAT | 1 cut(s) | 106 |
| MscI | TGGCCA | 1 cut(s) | 951 |
| Msp20I | TGGCCA | 1 cut(s) | 951 |
| MspA1I | CMGCKG | 2 cut(s) | 1694, 1934 |
| MspI | CCGG | 5 cut(s) | 1975, 2141, 2171, 2284, 2437 |
| MspR9I | CCNGG | 5 cut(s) | 1732, 1975, 2000, 2171, 2285 |
| Mva1269I | GAATGC | 2 cut(s) | 759, 1215 |
| MvaI | CCWGG | 2 cut(s) | 1732, 2000 |
| MvnI | CGCG | 1 cut(s) | 2411 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 251, 260, 1925, 1928, 1931, 2125, 2153, 2321, 2333 |
| NciI | CCSGG | 3 cut(s) | 1975, 2171, 2285 |
| NcoI | CCATGG | 1 cut(s) | 1830 |
| NlaIV | GGNNCC | 1 cut(s) | 2400 |
| NmeAIII | GCCGAG | 1 cut(s) | 1909 |
| NsiI | ATGCAT | 1 cut(s) | 106 |
| NspI | RCATGY | 1 cut(s) | 2270 |
| NspV | TTCGAA | 1 cut(s) | 843 |
| PaeI | GCATGC | 1 cut(s) | 2270 |
| PagI | TCATGA | 3 cut(s) | 343, 2035, 2341 |
| PciSI | GCTCTTC | 1 cut(s) | 2460 |
| PctI | GAATGC | 2 cut(s) | 759, 1215 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1903 |
| PinAI | ACCGGT | 1 cut(s) | 2140 |
| PleI | GAGTC | 1 cut(s) | 721 |
| PpsI | GAGTC | 1 cut(s) | 721 |
| PsiI | TTATAA | 1 cut(s) | 1392 |
| Psp124BI | GAGCTC | 3 cut(s) | 1460, 1784, 2338 |
| Psp6I | CCWGG | 2 cut(s) | 1730, 1998 |
| PspFI | CCCAGC | 1 cut(s) | 2220 |
| PspGI | CCWGG | 2 cut(s) | 1730, 1998 |
| PspN4I | GGNNCC | 1 cut(s) | 2400 |
| PspPI | GGNCC | 3 cut(s) | 1672, 1728, 2290 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 360, 392, 1119, 1151 |
| PstI | CTGCAG | 2 cut(s) | 1165, 1792 |
| PsuI | RGATCY | 3 cut(s) | 527, 1007, 1508 |
| PvuII | CAGCTG | 1 cut(s) | 1694 |
| RsaI | GTAC | 5 cut(s) | 545, 667, 1004, 1137, 2406 |
| RsaNI | GTAC | 5 cut(s) | 544, 666, 1003, 1136, 2405 |
| SacI | GAGCTC | 3 cut(s) | 1460, 1784, 2338 |
| SalI | GTCGAC | 1 cut(s) | 2426 |
| SapI | GCTCTTC | 1 cut(s) | 2460 |
| Sau96I | GGNCC | 3 cut(s) | 1672, 1728, 2290 |
| SchI | GAGTC | 1 cut(s) | 722 |
| ScrFI | CCNGG | 5 cut(s) | 1732, 1975, 2000, 2171, 2285 |
| SduI | GDGCHC | 5 cut(s) | 1460, 1784, 2088, 2178, 2338 |
| SfaNI | GCATC | 2 cut(s) | 391, 2106 |
| SfcI | CTRYAG | 2 cut(s) | 1161, 1788 |
| SfuI | TTCGAA | 1 cut(s) | 843 |
| SinI | GGWCC | 3 cut(s) | 1672, 1728, 2290 |
| SmlI | CTYRAG | 4 cut(s) | 1241, 1250, 2109, 2358 |
| SmoI | CTYRAG | 4 cut(s) | 1241, 1250, 2109, 2358 |
| SphI | GCATGC | 1 cut(s) | 2270 |
| SspI | AATATT | 2 cut(s) | 593, 682 |
| SspMI | CTAG | 3 cut(s) | 465, 2205, 2470 |
| SstI | GAGCTC | 3 cut(s) | 1460, 1784, 2338 |
| StyD4I | CCNGG | 5 cut(s) | 1730, 1973, 1998, 2169, 2283 |
| StyI | CCWWGG | 3 cut(s) | 1815, 1830, 2380 |
| TaaI | ACNGT | 3 cut(s) | 968, 1948, 2432 |
| TaiI | ACGT | 3 cut(s) | 124, 490, 2044 |
| TaqI | TCGA | 5 cut(s) | 843, 1043, 2008, 2427, 2461 |
| TatI | WGTACW | 1 cut(s) | 543 |
| TauI | GCSGC | 2 cut(s) | 1931, 1934 |
| TseI | GCWGC | 9 cut(s) | 263, 1160, 1914, 1919, 1922, 1925, 2253, 2297, 2324 |
| TspGWI | ACGGA | 3 cut(s) | 164, 1664, 2342 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1903 |
| VneI | GTGCAC | 1 cut(s) | 2174 |
| VpaK11BI | GGWCC | 3 cut(s) | 1672, 1728, 2290 |
| XapI | RAATTY | 7 cut(s) | 519, 749, 775, 838, 1370, 1630, 1793 |
| XceI | RCATGY | 1 cut(s) | 2270 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1738 |
| XmiI | GTMKAC | 1 cut(s) | 2427 |
| XspI | CTAG | 3 cut(s) | 465, 2205, 2470 |
| ZraI | GACGTC | 1 cut(s) | 488 |
| Zsp2I | ATGCAT | 1 cut(s) | 106 |