gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 2 cut(s) | 187, 379 |
| AgsI | TTSAA | 2 cut(s) | 192, 407 |
| AluBI | AGCT | 2 cut(s) | 316, 412 |
| AluI | AGCT | 2 cut(s) | 316, 412 |
| AspS9I | GGNCC | 1 cut(s) | 129 |
| AvaII | GGWCC | 1 cut(s) | 129 |
| BaeGI | GKGCMC | 1 cut(s) | 112 |
| BclI | TGATCA | 1 cut(s) | 246 |
| BfmI | CTRYAG | 2 cut(s) | 234, 384 |
| BmcAI | AGTACT | 1 cut(s) | 187 |
| Bme18I | GGWCC | 1 cut(s) | 129 |
| BmgT120I | GGNCC | 1 cut(s) | 129 |
| BpuEI | CTTGAG | 1 cut(s) | 380 |
| Bsa29I | ATCGAT | 1 cut(s) | 19 |
| BseCI | ATCGAT | 1 cut(s) | 19 |
| BseGI | GGATG | 1 cut(s) | 40 |
| BseSI | GKGCMC | 1 cut(s) | 112 |
| BseYI | CCCAGC | 1 cut(s) | 26 |
| BshVI | ATCGAT | 1 cut(s) | 19 |
| Bsp1286I | GDGCHC | 1 cut(s) | 112 |
| Bsp143I | GATC | 4 cut(s) | 8, 16, 20, 246 |
| BspDI | ATCGAT | 1 cut(s) | 19 |
| BspMAI | CTGCAG | 1 cut(s) | 238 |
| BssMI | GATC | 4 cut(s) | 8, 16, 20, 246 |
| Bst4CI | ACNGT | 1 cut(s) | 388 |
| BstF5I | GGATG | 1 cut(s) | 40 |
| BstKTI | GATC | 4 cut(s) | 11, 19, 23, 249 |
| BstMBI | GATC | 4 cut(s) | 8, 16, 20, 246 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 71 |
| BstSFI | CTRYAG | 2 cut(s) | 234, 384 |
| BstSLI | GKGCMC | 1 cut(s) | 112 |
| Bsu15I | ATCGAT | 1 cut(s) | 19 |
| BsuTUI | ATCGAT | 1 cut(s) | 19 |
| BtsCI | GGATG | 1 cut(s) | 40 |
| BtsI | GCAGTG | 1 cut(s) | 288 |
| BtsIMutI | CAGTG | 1 cut(s) | 288 |
| Cfr13I | GGNCC | 1 cut(s) | 129 |
| ClaI | ATCGAT | 1 cut(s) | 19 |
| Csp6I | GTAC | 2 cut(s) | 186, 378 |
| CviAII | CATG | 2 cut(s) | 371, 433 |
| CviJI | RGCY | 4 cut(s) | 86, 272, 316, 412 |
| CviKI_1 | RGCY | 4 cut(s) | 86, 272, 316, 412 |
| CviQI | GTAC | 2 cut(s) | 186, 378 |
| DpnI | GATC | 4 cut(s) | 10, 18, 22, 248 |
| DpnII | GATC | 4 cut(s) | 8, 16, 20, 246 |
| DraI | TTTAAA | 1 cut(s) | 276 |
| Eco47I | GGWCC | 1 cut(s) | 129 |
| FaeI | CATG | 2 cut(s) | 374, 436 |
| FaiI | YATR | 6 cut(s) | 37, 72, 372, 416, 434, 471 |
| FatI | CATG | 2 cut(s) | 370, 432 |
| FbaI | TGATCA | 1 cut(s) | 246 |
| FokI | GGATG | 1 cut(s) | 27 |
| GsaI | CCCAGC | 1 cut(s) | 30 |
| Hin1II | CATG | 2 cut(s) | 374, 436 |
| HincII | GTYRAC | 1 cut(s) | 33 |
| HindII | GTYRAC | 1 cut(s) | 33 |
| HinfI | GANTC | 2 cut(s) | 332, 395 |
| Hpy166II | GTNNAC | 2 cut(s) | 33, 231 |
| Hpy188I | TCNGA | 2 cut(s) | 267, 304 |
| Hpy188III | TCNNGA | 1 cut(s) | 359 |
| Hpy8I | GTNNAC | 2 cut(s) | 33, 231 |
| HpyAV | CCTTC | 3 cut(s) | 76, 88, 368 |
| HpyCH4III | ACNGT | 1 cut(s) | 388 |
| HpyCH4V | TGCA | 4 cut(s) | 211, 236, 338, 418 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 71 |
| Hsp92II | CATG | 2 cut(s) | 374, 436 |
| Ksp22I | TGATCA | 1 cut(s) | 246 |
| Kzo9I | GATC | 4 cut(s) | 8, 16, 20, 246 |
| LpnPI | CCDG | 2 cut(s) | 12, 112 |
| MalI | GATC | 4 cut(s) | 10, 18, 22, 248 |
| MboI | GATC | 4 cut(s) | 8, 16, 20, 246 |
| MboII | GAAGA | 2 cut(s) | 291, 448 |
| MhlI | GDGCHC | 1 cut(s) | 112 |
| MluCI | AATT | 1 cut(s) | 475 |
| MlyI | GAGTC | 2 cut(s) | 341, 404 |
| MmeI | TCCRAC | 1 cut(s) | 182 |
| MnlI | CCTC | 2 cut(s) | 261, 346 |
| MseI | TTAA | 3 cut(s) | 54, 275, 478 |
| MslI | CAYNNNNRTG | 2 cut(s) | 103, 437 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 71 |
| NdeII | GATC | 4 cut(s) | 8, 16, 20, 246 |
| NlaIII | CATG | 2 cut(s) | 374, 436 |
| PleI | GAGTC | 2 cut(s) | 340, 403 |
| PpsI | GAGTC | 2 cut(s) | 340, 403 |
| PspFI | CCCAGC | 1 cut(s) | 26 |
| PspPI | GGNCC | 1 cut(s) | 129 |
| PstI | CTGCAG | 1 cut(s) | 238 |
| RsaI | GTAC | 2 cut(s) | 187, 379 |
| RsaNI | GTAC | 2 cut(s) | 186, 378 |
| RseI | CAYNNNNRTG | 2 cut(s) | 103, 437 |
| SaqAI | TTAA | 3 cut(s) | 54, 275, 478 |
| Sau3AI | GATC | 4 cut(s) | 8, 16, 20, 246 |
| Sau96I | GGNCC | 1 cut(s) | 129 |
| ScaI | AGTACT | 1 cut(s) | 187 |
| SchI | GAGTC | 2 cut(s) | 341, 404 |
| SduI | GDGCHC | 1 cut(s) | 112 |
| SetI | ASST | 4 cut(s) | 318, 357, 379, 414 |
| SfcI | CTRYAG | 2 cut(s) | 234, 384 |
| SinI | GGWCC | 1 cut(s) | 129 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 103, 437 |
| SmlI | CTYRAG | 1 cut(s) | 359 |
| SmoI | CTYRAG | 1 cut(s) | 359 |
| Sse9I | AATT | 1 cut(s) | 475 |
| TaaI | ACNGT | 1 cut(s) | 388 |
| TaqI | TCGA | 1 cut(s) | 19 |
| TasI | AATT | 1 cut(s) | 475 |
| TatI | WGTACW | 1 cut(s) | 185 |
| Tru1I | TTAA | 3 cut(s) | 54, 275, 478 |
| Tru9I | TTAA | 3 cut(s) | 54, 275, 478 |
| TscAI | CASTG | 1 cut(s) | 295 |
| TspDTI | ATGAA | 4 cut(s) | 107, 255, 387, 449 |
| TspRI | CASTG | 1 cut(s) | 295 |
| VpaK11BI | GGWCC | 1 cut(s) | 129 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 225 |
| ZrmI | AGTACT | 1 cut(s) | 187 |