gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 279 |
| AccI | GTMKAC | 1 cut(s) | 177 |
| AfaI | GTAC | 1 cut(s) | 271 |
| AgsI | TTSAA | 1 cut(s) | 215 |
| AluBI | AGCT | 3 cut(s) | 26, 98, 122 |
| AluI | AGCT | 3 cut(s) | 26, 98, 122 |
| ApeKI | GCWGC | 2 cut(s) | 23, 74 |
| AsuHPI | GGTGA | 2 cut(s) | 32, 247 |
| BbvI | GCAGC | 2 cut(s) | 35, 86 |
| BfaI | CTAG | 1 cut(s) | 27 |
| BisI | GCNGC | 2 cut(s) | 24, 75 |
| BlsI | GCNGC | 2 cut(s) | 25, 76 |
| Bse118I | RCCGGY | 1 cut(s) | 232 |
| BseGI | GGATG | 1 cut(s) | 121 |
| BseXI | GCAGC | 2 cut(s) | 35, 86 |
| BsgI | GTGCAG | 1 cut(s) | 42 |
| BsiSI | CCGG | 1 cut(s) | 233 |
| Bsp143I | GATC | 1 cut(s) | 16 |
| BsrFI | RCCGGY | 1 cut(s) | 232 |
| BssAI | RCCGGY | 1 cut(s) | 232 |
| BssMI | GATC | 1 cut(s) | 16 |
| BstDEI | CTNAG | 2 cut(s) | 162, 264 |
| BstF5I | GGATG | 1 cut(s) | 121 |
| BstKTI | GATC | 1 cut(s) | 19 |
| BstMBI | GATC | 1 cut(s) | 16 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 83, 128 |
| BstV1I | GCAGC | 2 cut(s) | 35, 86 |
| BtsCI | GGATG | 1 cut(s) | 121 |
| Cfr10I | RCCGGY | 1 cut(s) | 232 |
| Csp6I | GTAC | 1 cut(s) | 270 |
| CviAII | CATG | 3 cut(s) | 78, 126, 307 |
| CviJI | RGCY | 6 cut(s) | 26, 86, 98, 122, 131, 232 |
| CviKI_1 | RGCY | 6 cut(s) | 26, 86, 98, 122, 131, 232 |
| CviQI | GTAC | 1 cut(s) | 270 |
| DdeI | CTNAG | 2 cut(s) | 162, 264 |
| DpnI | GATC | 1 cut(s) | 18 |
| DpnII | GATC | 1 cut(s) | 16 |
| FaeI | CATG | 3 cut(s) | 81, 129, 310 |
| FatI | CATG | 3 cut(s) | 77, 125, 306 |
| FblI | GTMKAC | 1 cut(s) | 177 |
| Fnu4HI | GCNGC | 2 cut(s) | 24, 75 |
| FokI | GGATG | 1 cut(s) | 128 |
| Fsp4HI | GCNGC | 2 cut(s) | 24, 75 |
| FspBI | CTAG | 1 cut(s) | 27 |
| GluI | GCNGC | 2 cut(s) | 24, 75 |
| HapII | CCGG | 1 cut(s) | 233 |
| Hin1II | CATG | 3 cut(s) | 81, 129, 310 |
| HincII | GTYRAC | 1 cut(s) | 33 |
| HindII | GTYRAC | 1 cut(s) | 33 |
| HindIII | AAGCTT | 1 cut(s) | 96 |
| HpaII | CCGG | 1 cut(s) | 233 |
| HphI | GGTGA | 2 cut(s) | 32, 247 |
| Hpy166II | GTNNAC | 3 cut(s) | 33, 108, 178 |
| Hpy188III | TCNNGA | 1 cut(s) | 53 |
| Hpy8I | GTNNAC | 3 cut(s) | 33, 108, 178 |
| HpyAV | CCTTC | 1 cut(s) | 76 |
| HpyCH4V | TGCA | 3 cut(s) | 23, 74, 251 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 83, 128 |
| HpyF3I | CTNAG | 2 cut(s) | 162, 264 |
| Hsp92II | CATG | 3 cut(s) | 81, 129, 310 |
| Kzo9I | GATC | 1 cut(s) | 16 |
| LpnPI | CCDG | 1 cut(s) | 246 |
| Lsp1109I | GCAGC | 2 cut(s) | 35, 86 |
| MaeI | CTAG | 1 cut(s) | 27 |
| MaeIII | GTNAC | 1 cut(s) | 38 |
| MalI | GATC | 1 cut(s) | 18 |
| MboI | GATC | 1 cut(s) | 16 |
| MluCI | AATT | 1 cut(s) | 274 |
| MmeI | TCCRAC | 1 cut(s) | 182 |
| MnlI | CCTC | 1 cut(s) | 54 |
| MseI | TTAA | 1 cut(s) | 225 |
| MspI | CCGG | 1 cut(s) | 233 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 83, 128 |
| NdeII | GATC | 1 cut(s) | 16 |
| NlaIII | CATG | 3 cut(s) | 81, 129, 310 |
| NmuCI | GTSAC | 1 cut(s) | 38 |
| PkrI | GCNGC | 2 cut(s) | 25, 76 |
| PsiI | TTATAA | 1 cut(s) | 279 |
| RsaI | GTAC | 1 cut(s) | 271 |
| RsaNI | GTAC | 1 cut(s) | 270 |
| SaqAI | TTAA | 1 cut(s) | 225 |
| SatI | GCNGC | 2 cut(s) | 24, 75 |
| Sau3AI | GATC | 1 cut(s) | 16 |
| SetI | ASST | 5 cut(s) | 10, 28, 32, 100, 124 |
| SgeI | CNNG | 8 cut(s) | 32, 39, 48, 65, 90, 138, 245, 295 |
| Sse9I | AATT | 1 cut(s) | 274 |
| SspMI | CTAG | 1 cut(s) | 27 |
| TaqI | TCGA | 1 cut(s) | 138 |
| TasI | AATT | 1 cut(s) | 274 |
| TatI | WGTACW | 1 cut(s) | 269 |
| Tru1I | TTAA | 1 cut(s) | 225 |
| Tru9I | TTAA | 1 cut(s) | 225 |
| TseFI | GTSAC | 1 cut(s) | 38 |
| TseI | GCWGC | 2 cut(s) | 23, 74 |
| Tsp45I | GTSAC | 1 cut(s) | 38 |
| TspDTI | ATGAA | 1 cut(s) | 107 |
| TspGWI | ACGGA | 1 cut(s) | 36 |
| XmiI | GTMKAC | 1 cut(s) | 177 |
| XspI | CTAG | 1 cut(s) | 27 |