Rmu_sc0000898.1_g000075

No description available

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000898.1
Physical Location & Seq
Forward (+)
335150 .. 335536
387 bp
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UTR
Exon/CDS
Intron
Rmu_sc0000898.1_g000075.1.cds

Sequence Viewer

Length: 387 bp
atggacttgcaaggtgataaagcttttcagacttggaagaagactgaacgcaatgaactcaacaacaggatcaaagtgctggaacttgaggtaaaaggacaacatgcattgaatttgaaactgttaattaagaatgaaactttgcagggtgaactaaaatcaactcaagaaaagttcatgaagttcgagatcaactttggggcagtatccaaactatttggttcagaaaaagctcctcctgacacatttggactcggttattctggagaaagctctaaaagcaccagatttgtgaaagaatcaagtccagtcgttgaaaatattgagtcattccctaatgtcatcaaggaaaccaacacagtgcttaagaataaatgtgataaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

128

Amino Acids

14.51

Weight (kDa)

8.95

Isoelectric Point (pI)

32.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 77
AcsI RAATTY 1 cut(s) 112
AflII CTTAAG 1 cut(s) 365
AgsI TTSAA 3 cut(s) 112, 118, 317
AluBI AGCT 3 cut(s) 23, 233, 273
AluI AGCT 3 cut(s) 23, 233, 273
AlwI GGATC 1 cut(s) 77
ApoI RAATTY 1 cut(s) 112
AsuHPI GGTGA 2 cut(s) 26, 161
BbsI GAAGAC 1 cut(s) 47
BciVI GTATCC 1 cut(s) 217
BfrI CTTAAG 1 cut(s) 365
BfuI GTATCC 1 cut(s) 217
BpiI GAAGAC 1 cut(s) 47
BpmI CTGGAG 1 cut(s) 285
BpuEI CTTGAG 2 cut(s) 107, 150
Bse1I ACTGG 1 cut(s) 308
Bse3DI GCAATG 1 cut(s) 58
BseMI GCAATG 1 cut(s) 58
BseNI ACTGG 1 cut(s) 308
BseRI GAGGAG 1 cut(s) 225
Bsp143I GATC 2 cut(s) 69, 189
BspHI TCATGA 1 cut(s) 177
BspPI GGATC 1 cut(s) 77
BspTI CTTAAG 1 cut(s) 365
BsrDI GCAATG 1 cut(s) 58
BsrI ACTGG 1 cut(s) 308
BssMI GATC 2 cut(s) 69, 189
Bst4CI ACNGT 2 cut(s) 123, 361
BstAFI CTTAAG 1 cut(s) 365
BstKTI GATC 2 cut(s) 72, 192
BstMBI GATC 2 cut(s) 69, 189
BstMWI GCNNNNNNNGC 1 cut(s) 279
BstNSI RCATGY 1 cut(s) 107
BstV2I GAAGAC 1 cut(s) 47
BsuI GTATCC 1 cut(s) 217
BtsIMutI CAGTG 1 cut(s) 366
CciI TCATGA 1 cut(s) 177
CviAII CATG 2 cut(s) 104, 178
CviJI RGCY 3 cut(s) 23, 233, 273
CviKI_1 RGCY 3 cut(s) 23, 233, 273
DpnI GATC 2 cut(s) 71, 191
DpnII GATC 2 cut(s) 69, 189
EcoT22I ATGCAT 1 cut(s) 109
FaeI CATG 2 cut(s) 107, 181
FaiI YATR 2 cut(s) 105, 179
FatI CATG 2 cut(s) 103, 177
GsuI CTGGAG 1 cut(s) 285
Hin1II CATG 2 cut(s) 107, 181
HindIII AAGCTT 1 cut(s) 21
HinfI GANTC 3 cut(s) 252, 299, 326
HphI GGTGA 2 cut(s) 26, 161
Hpy166II GTNNAC 1 cut(s) 152
Hpy188I TCNGA 2 cut(s) 30, 226
Hpy188III TCNNGA 5 cut(s) 167, 178, 187, 239, 264
Hpy8I GTNNAC 1 cut(s) 152
HpyCH4III ACNGT 2 cut(s) 123, 361
HpyCH4V TGCA 3 cut(s) 10, 107, 145
HpyF10VI GCNNNNNNNGC 1 cut(s) 279
Hsp92II CATG 2 cut(s) 107, 181
Kzo9I GATC 2 cut(s) 69, 189
LmnI GCTCC 1 cut(s) 238
LpnPI CCDG 7 cut(s) 52, 65, 131, 249, 252, 298, 321
MalI GATC 2 cut(s) 71, 191
MboI GATC 2 cut(s) 69, 189
MboII GAAGA 2 cut(s) 49, 52
MluCI AATT 2 cut(s) 112, 126
MlyI GAGTC 2 cut(s) 246, 335
MnlI CCTC 2 cut(s) 82, 246
Mph1103I ATGCAT 1 cut(s) 109
MseI TTAA 3 cut(s) 125, 129, 366
MspCI CTTAAG 1 cut(s) 365
MwoI GCNNNNNNNGC 1 cut(s) 279
NdeII GATC 2 cut(s) 69, 189
NlaIII CATG 2 cut(s) 107, 181
NsiI ATGCAT 1 cut(s) 109
NspI RCATGY 1 cut(s) 107
PacI TTAATTAA 1 cut(s) 129
PagI TCATGA 1 cut(s) 177
PfeI GAWTC 1 cut(s) 299
PleI GAGTC 2 cut(s) 246, 334
PpsI GAGTC 2 cut(s) 246, 334
SaqAI TTAA 3 cut(s) 125, 129, 366
Sau3AI GATC 2 cut(s) 69, 189
SchI GAGTC 2 cut(s) 246, 335
SetI ASST 5 cut(s) 16, 25, 93, 235, 275
SmlI CTYRAG 3 cut(s) 86, 165, 365
SmoI CTYRAG 3 cut(s) 86, 165, 365
Sse9I AATT 2 cut(s) 112, 126
SspI AATATT 1 cut(s) 322
TaaI ACNGT 2 cut(s) 123, 361
TaqI TCGA 1 cut(s) 186
TasI AATT 2 cut(s) 112, 126
TfiI GAWTC 1 cut(s) 299
Tru1I TTAA 3 cut(s) 125, 129, 366
Tru9I TTAA 3 cut(s) 125, 129, 366
TscAI CASTG 1 cut(s) 366
TspDTI ATGAA 4 cut(s) 69, 150, 166, 194
TspRI CASTG 1 cut(s) 366
Vha464I CTTAAG 1 cut(s) 365
XapI RAATTY 1 cut(s) 112
XceI RCATGY 1 cut(s) 107
Zsp2I ATGCAT 1 cut(s) 109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.