FvH4_7g17811
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000357
Physical Location & Seq
Reverse (-)
15024093 .. 15026221
2129 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g17811.t1

Sequence Viewer

Length: 810 bp
ATGCCAAGCTCTCTGCATCGGACATTGCAGCCGAGATTGGCACCACTGGCTATGCTGGACCGCATCCTCAGGCTCCTCACCGCATACTCCGTGCTCAGTTGCTCTGTGGTCACTGGTCGAAGGCTGTACAGCCTCACTGCGGTTTCCAAGCACTTTGTGACTAGTGAAGATGGTGCTTCTTTAAGCCCCTTGATGGCATTAGTTCATGGCAGTGTCGTCATGAACACTTGGGTCCATGGCAAACACCTCTTTGAGTATGCAGATTCAGACCCCAGTTTTAATCGAGTTTTCAACTCGGCAATGGTCAACTTCACCACTTTGATTATGAGGAGGATTCTGGATAGCTACAAGGGTTTTGAGCAACTTACCCAGCTTGTTGATGTTGGGGGAGGTCTAGGGGTGGCTCTTGGTCTCATCACTTCCAGATATCCTCACATTAAGGGGATCAACTACGACTTACCCCATGTTTTAAAACATGCTCCCCAATATCCTGGTGTAGTCCGTGTGGAACACAACATACTTCATGACTGGATGGATGAGCAGTGTATAAAGCTACTGAAAATTTGTTATACTGCTATTCCAGATAATGGAAAAGTAATTGTTGTGGAAGTACTTGTTCCGGATGAGCCAATTAGCAGCCCTGCTGAGAAGATCACATCAGAGCTTGATGTGCTGATGATGACACTAACCCCACGGGGGAGGGAAAGTACCCAACAAGAATTTTTGGAGTTGGCAACTGCTGCTGGATTTAGTGACATCAAATATGAATGTCACTGCAGTTATCTTTATGTCATGGAGTTCATTAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko01058 ko01100 ko01110 map00940 map01058 map01100 map01110
Pfam Domains
Protein Families
Dimerisation Methyltransf_2

Protein Analysis

270

Amino Acids

30.12

Weight (kDa)

6.4

Isoelectric Point (pI)

37.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dimerisation PF08100 10 - 55 1.6e-07 O-methyltransferase dimerisation domain
Methyltransf_2 PF00891 77 - 163 6.2e-23 O-methyltransferase domain
Methyltransf_2 PF00891 172 - 251 3.7e-19 O-methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000357)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g17810 FvH4_7g17811 FvH4_7g17820 FvH4_7g17830
malus_domestica MD00G1100700.v1.1 MD01G1089600.v1.1 MD01G1089800.v1.1 MD01G1090400.v1.1 MD01G1090500.v1.1 MD01G1090800.v1.1 MD04G1141100.v1.1 MD07G1161000.v1.1 MD07G1161100.v1.1 MD10G1030000.v1.1 MD10G1030200.v1.1 MD15G1409200.v1.1 MD15G1409700.v1.1
prunus_persica Prupe.2G199100_v2.0.a1 Prupe.2G199100_v2.0.a1 Prupe.2G199300_v2.0.a1 Prupe.2G199400_v2.0.a1 Prupe.2G199400_v2.0.a1 Prupe.2G199500_v2.0.a1 Prupe.2G199600_v2.0.a1 Prupe.2G199600_v2.0.a1 Prupe.2G199800_v2.0.a1 Prupe.2G200100_v2.0.a1 Prupe.2G200100_v2.0.a1
pyrus_communis pycom01g11360 pycom01g11370 pycom01g11400 pycom01g11440 pycom01g11480 pycom01g11490 pycom07g15690 pycom08g12100
rosa_chinensis RchiOBHm_Chr1g0317931 RchiOBHm_Chr1g0361211 RchiOBHm_Chr1g0361221 RchiOBHm_Chr1g0361241 RchiOBHm_Chr1g0367691 RchiOBHm_Chr4g0390171 RchiOBHm_Chr4g0396271 RchiOBHm_Chr6g0286421
rosa_laevigata RLG00000002555 RLG00000009555 RLG00000027275 RLG00000027731 RLG00000027732 RLG00000027734 RLG00000027738 RLG00000030575
rosa_multiflora Rmu_co8470451.1_g000001 Rmu_sc0000250.1_g000010 Rmu_sc0010379.1_g000006 Rmu_sc0011132.1_g000005 Rmu_sc0011132.1_g000007 Rmu_sc0038028.1_g000001 Rmu_ssc0000008.1_g000043 Rmu_ssc0000234.1_g000002 Rmu_ssc0000418.1_g000001
rosa_roxburghii Rroxscaffold_2G00116370 Rroxscaffold_4G00289300 Rroxscaffold_4G00295130 Rroxscaffold_4G00295140 Rroxscaffold_4G00295160 Rroxscaffold_4G00295190 Rroxscaffold_4G00295220 Rroxscaffold_4G00330100 Rroxscaffold_5G00341100
rosa_rugosa Rorug01G0287600 Rorug01G0287700 Rorug01G0336200 Rorug01G0336200 Rorug03G0350700
rosa_samantha Rh1AG030300 Rh1AG298500 Rh1AG298600 Rh1AG298700 Rh1AG298900 Rh1BG262400 Rh1BG262500 Rh1BG262800 Rh1BG304800 Rh1CG029000 Rh1CG279800 Rh1CG279900 Rh1CG280000 Rh1CG280100 Rh1CG280200 Rh1CG320500 Rh1DG041200 Rh1DG292700 Rh1DG292800 Rh1DG337100 Rh3DG107500 Rh4AG128100 Rh4BG024900 Rh4CG072700 Rh4DG063000 Rh6CG295900 Rh6DG287700
rosa_wichuraiana Rw1G002290 Rw1G026410 Rw1G026420 Rw1G026440 Rw4G005440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 40
AccB7I CCANNNNNTGG 1 cut(s) 587
AccIII TCCGGA 1 cut(s) 619
AciI CCGC 3 cut(s) 61, 81, 140
AclWI GGATC 1 cut(s) 452
AcsI RAATTY 2 cut(s) 561, 719
AdeI CACNNNGTG 1 cut(s) 157
AfaI GTAC 3 cut(s) 128, 612, 709
AfiI CCNNNNNNNGG 4 cut(s) 139, 193, 587, 696
AgsI TTSAA 1 cut(s) 292
AhlI ACTAGT 1 cut(s) 161
AjnI CCWGG 1 cut(s) 490
AluBI AGCT 5 cut(s) 9, 345, 373, 553, 664
AluI AGCT 5 cut(s) 9, 345, 373, 553, 664
Alw21I GWGCWC 1 cut(s) 96
Alw26I GTCTC 1 cut(s) 416
AlwI GGATC 1 cut(s) 452
Aor13HI TCCGGA 1 cut(s) 619
ApeKI GCWGC 3 cut(s) 28, 636, 740
ApoI RAATTY 2 cut(s) 561, 719
AspS9I GGNCC 2 cut(s) 58, 232
AsuHPI GGTGA 2 cut(s) 70, 304
AvaII GGWCC 2 cut(s) 58, 232
AxyI CCTNAGG 1 cut(s) 68
BanI GGYRCC 1 cut(s) 40
Bbv12I GWGCWC 1 cut(s) 96
BbvI GCAGC 3 cut(s) 40, 648, 727
BccI CCATC 3 cut(s) 164, 187, 526
BciT130I CCWGG 1 cut(s) 492
BcoDI GTCTC 1 cut(s) 416
BcuI ACTAGT 1 cut(s) 161
BfaI CTAG 2 cut(s) 162, 395
BfmI CTRYAG 1 cut(s) 775
BisI GCNGC 3 cut(s) 29, 637, 741
BlsI GCNGC 3 cut(s) 30, 638, 742
BmcAI AGTACT 1 cut(s) 612
Bme1390I CCNGG 1 cut(s) 492
Bme18I GGWCC 2 cut(s) 58, 232
BmgT120I GGNCC 2 cut(s) 58, 232
BmiI GGNNCC 3 cut(s) 42, 74, 233
BmrFI CCNGG 1 cut(s) 492
BmrI ACTGGG 1 cut(s) 267
BmsI GCATC 2 cut(s) 25, 72
BmuI ACTGGG 1 cut(s) 267
BsaI GGTCTC 1 cut(s) 416
BsaJI CCNNGG 2 cut(s) 235, 692
BsaWI WCCGGW 1 cut(s) 619
BsaXI ACNNNNNCTCC 2 cut(s) 691, 721
Bsc4I CCNNNNNNNGG 4 cut(s) 139, 193, 587, 696
Bse1I ACTGG 4 cut(s) 51, 118, 273, 533
Bse21I CCTNAGG 1 cut(s) 68
Bse3DI GCAATG 2 cut(s) 23, 306
BseAI TCCGGA 1 cut(s) 619
BseBI CCWGG 1 cut(s) 492
BseDI CCNNGG 2 cut(s) 235, 692
BseGI GGATG 4 cut(s) 63, 537, 541, 628
BseLI CCNNNNNNNGG 4 cut(s) 139, 193, 587, 696
BseMI GCAATG 2 cut(s) 23, 306
BseMII CTCAG 3 cut(s) 82, 109, 636
BseNI ACTGG 4 cut(s) 51, 118, 273, 533
BseRI GAGGAG 2 cut(s) 65, 343
BseXI GCAGC 3 cut(s) 40, 648, 727
BseYI CCCAGC 1 cut(s) 369
BshNI GGYRCC 1 cut(s) 40
BsiHKAI GWGCWC 1 cut(s) 96
BsiSI CCGG 1 cut(s) 620
BslI CCNNNNNNNGG 4 cut(s) 139, 193, 587, 696
BsmAI GTCTC 1 cut(s) 416
Bso31I GGTCTC 1 cut(s) 416
Bsp1286I GDGCHC 1 cut(s) 96
Bsp13I TCCGGA 1 cut(s) 619
Bsp1407I TGTACA 1 cut(s) 126
Bsp143I GATC 2 cut(s) 444, 651
Bsp19I CCATGG 1 cut(s) 235
BspACI CCGC 3 cut(s) 61, 81, 140
BspCNI CTCAG 3 cut(s) 81, 108, 637
BspEI TCCGGA 1 cut(s) 619
BspHI TCATGA 2 cut(s) 219, 523
BspLI GGNNCC 3 cut(s) 42, 74, 233
BspMAI CTGCAG 1 cut(s) 779
BspPI GGATC 1 cut(s) 452
BspT107I GGYRCC 1 cut(s) 40
BspTNI GGTCTC 1 cut(s) 416
BsrDI GCAATG 2 cut(s) 23, 306
BsrGI TGTACA 1 cut(s) 126
BsrI ACTGG 4 cut(s) 51, 118, 273, 533
BssECI CCNNGG 2 cut(s) 235, 692
BssMI GATC 2 cut(s) 444, 651
BssT1I CCWWGG 1 cut(s) 235
Bst2UI CCWGG 1 cut(s) 492
BstAPI GCANNNNNTGC 1 cut(s) 740
BstAUI TGTACA 1 cut(s) 126
BstDEI CTNAG 3 cut(s) 68, 95, 645
BstDSI CCRYGG 2 cut(s) 235, 692
BstF5I GGATG 4 cut(s) 63, 537, 541, 628
BstKTI GATC 2 cut(s) 447, 654
BstMAI GTCTC 1 cut(s) 416
BstMBI GATC 2 cut(s) 444, 651
BstMWI GCNNNNNNNGC 3 cut(s) 47, 670, 740
BstNI CCWGG 1 cut(s) 492
BstNSI RCATGY 1 cut(s) 479
BstSCI CCNGG 1 cut(s) 490
BstSFI CTRYAG 1 cut(s) 775
BstV1I GCAGC 3 cut(s) 40, 648, 727
BstXI CCANNNNNNTGG 1 cut(s) 491
Bsu36I CCTNAGG 1 cut(s) 68
BtgI CCRYGG 2 cut(s) 235, 692
BtsCI GGATG 4 cut(s) 63, 537, 541, 628
BtsI GCAGTG 4 cut(s) 135, 217, 548, 772
BtsIMutI CAGTG 6 cut(s) 44, 111, 135, 217, 548, 772
CciI TCATGA 2 cut(s) 219, 523
Cfr13I GGNCC 2 cut(s) 58, 232
Csp6I GTAC 3 cut(s) 127, 611, 708
CviAII CATG 7 cut(s) 206, 220, 236, 464, 476, 524, 793
CviQI GTAC 3 cut(s) 127, 611, 708
DdeI CTNAG 3 cut(s) 68, 95, 645
DpnI GATC 2 cut(s) 446, 653
DpnII GATC 2 cut(s) 444, 651
DraI TTTAAA 1 cut(s) 471
DraIII CACNNNGTG 1 cut(s) 157
Eco130I CCWWGG 1 cut(s) 235
Eco31I GGTCTC 1 cut(s) 416
Eco32I GATATC 1 cut(s) 428
Eco47I GGWCC 2 cut(s) 58, 232
Eco81I CCTNAGG 1 cut(s) 68
EcoRII CCWGG 1 cut(s) 490
EcoRV GATATC 1 cut(s) 428
EcoT14I CCWWGG 1 cut(s) 235
ErhI CCWWGG 1 cut(s) 235
FaeI CATG 7 cut(s) 209, 223, 239, 467, 479, 527, 796
FatI CATG 7 cut(s) 205, 219, 235, 463, 475, 523, 792
Fnu4HI GCNGC 3 cut(s) 29, 637, 741
FokI GGATG 4 cut(s) 50, 544, 548, 635
Fsp4HI GCNGC 3 cut(s) 29, 637, 741
FspBI CTAG 2 cut(s) 162, 395
GluI GCNGC 3 cut(s) 29, 637, 741
GsaI CCCAGC 1 cut(s) 373
HapII CCGG 1 cut(s) 620
Hin1II CATG 7 cut(s) 209, 223, 239, 467, 479, 527, 796
HincII GTYRAC 1 cut(s) 307
HindII GTYRAC 1 cut(s) 307
HinfI GANTC 2 cut(s) 263, 334
HpaII CCGG 1 cut(s) 620
HphI GGTGA 2 cut(s) 70, 304
Hpy166II GTNNAC 1 cut(s) 307
Hpy188I TCNGA 3 cut(s) 21, 268, 661
Hpy188III TCNNGA 6 cut(s) 220, 338, 423, 524, 581, 620
Hpy8I GTNNAC 1 cut(s) 307
HpyAV CCTTC 1 cut(s) 114
HpyCH4V TGCA 4 cut(s) 16, 28, 260, 777
HpyF10VI GCNNNNNNNGC 3 cut(s) 47, 670, 740
HpyF3I CTNAG 3 cut(s) 68, 95, 645
Hsp92II CATG 7 cut(s) 209, 223, 239, 467, 479, 527, 796
Kpn2I TCCGGA 1 cut(s) 619
Kzo9I GATC 2 cut(s) 444, 651
LmnI GCTCC 2 cut(s) 78, 484
Lsp1109I GCAGC 3 cut(s) 40, 648, 727
LweI GCATC 2 cut(s) 25, 72
MaeI CTAG 2 cut(s) 162, 395
MaeIII GTNAC 4 cut(s) 109, 157, 752, 770
MalI GATC 2 cut(s) 446, 653
MboI GATC 2 cut(s) 444, 651
MboII GAAGA 2 cut(s) 179, 661
MhlI GDGCHC 1 cut(s) 96
MluCI AATT 4 cut(s) 561, 597, 630, 719
MnlI CCTC 9 cut(s) 77, 86, 143, 257, 321, 324, 383, 441, 693
MroI TCCGGA 1 cut(s) 619
MseI TTAA 5 cut(s) 182, 279, 438, 470, 804
MslI CAYNNNNRTG 1 cut(s) 210
MspI CCGG 1 cut(s) 620
MspR9I CCNGG 1 cut(s) 492
MvaI CCWGG 1 cut(s) 492
MwoI GCNNNNNNNGC 3 cut(s) 47, 670, 740
NcoI CCATGG 1 cut(s) 235
NdeII GATC 2 cut(s) 444, 651
NlaIII CATG 7 cut(s) 209, 223, 239, 467, 479, 527, 796
NlaIV GGNNCC 3 cut(s) 42, 74, 233
NmeAIII GCCGAG 2 cut(s) 57, 275
NmuCI GTSAC 4 cut(s) 109, 157, 752, 770
NspI RCATGY 1 cut(s) 479
PagI TCATGA 2 cut(s) 219, 523
PfeI GAWTC 2 cut(s) 263, 334
PflMI CCANNNNNTGG 1 cut(s) 587
PkrI GCNGC 3 cut(s) 30, 638, 742
Psp6I CCWGG 1 cut(s) 490
PspFI CCCAGC 1 cut(s) 369
PspGI CCWGG 1 cut(s) 490
PspN4I GGNNCC 3 cut(s) 42, 74, 233
PspPI GGNCC 2 cut(s) 58, 232
PsrI GAACNNNNNNTAC 2 cut(s) 501, 533
PstI CTGCAG 1 cut(s) 779
RsaI GTAC 3 cut(s) 128, 612, 709
RsaNI GTAC 3 cut(s) 127, 611, 708
RseI CAYNNNNRTG 1 cut(s) 210
SaqAI TTAA 5 cut(s) 182, 279, 438, 470, 804
SatI GCNGC 3 cut(s) 29, 637, 741
Sau3AI GATC 2 cut(s) 444, 651
Sau96I GGNCC 2 cut(s) 58, 232
ScaI AGTACT 1 cut(s) 612
ScrFI CCNGG 1 cut(s) 492
SduI GDGCHC 1 cut(s) 96
SetI ASST 7 cut(s) 11, 249, 347, 375, 394, 555, 666
SfaNI GCATC 2 cut(s) 25, 72
SfcI CTRYAG 1 cut(s) 775
SinI GGWCC 2 cut(s) 58, 232
SmiMI CAYNNNNRTG 1 cut(s) 210
SpeI ACTAGT 1 cut(s) 161
Sse9I AATT 4 cut(s) 561, 597, 630, 719
SsiI CCGC 3 cut(s) 61, 81, 140
SspMI CTAG 2 cut(s) 162, 395
StyD4I CCNGG 1 cut(s) 490
StyI CCWWGG 1 cut(s) 235
TaqI TCGA 2 cut(s) 118, 283
TasI AATT 4 cut(s) 561, 597, 630, 719
TatI WGTACW 2 cut(s) 126, 610
TfiI GAWTC 2 cut(s) 263, 334
Tru1I TTAA 5 cut(s) 182, 279, 438, 470, 804
Tru9I TTAA 5 cut(s) 182, 279, 438, 470, 804
TscAI CASTG 6 cut(s) 51, 118, 142, 217, 548, 779
TseFI GTSAC 4 cut(s) 109, 157, 752, 770
TseI GCWGC 3 cut(s) 28, 636, 740
Tsp45I GTSAC 4 cut(s) 109, 157, 752, 770
TspDTI ATGAA 5 cut(s) 194, 236, 512, 780, 790
TspGWI ACGGA 2 cut(s) 79, 491
TspRI CASTG 6 cut(s) 51, 118, 142, 217, 548, 779
Van91I CCANNNNNTGG 1 cut(s) 587
VpaK11BI GGWCC 2 cut(s) 58, 232
XapI RAATTY 2 cut(s) 561, 719
XceI RCATGY 1 cut(s) 479
XspI CTAG 2 cut(s) 162, 395
ZrmI AGTACT 1 cut(s) 612
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.