Prupe.2G199400_v2.0.a1
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000357
Physical Location & Seq
Reverse (-)
23659396 .. 23661503
2108 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G199400.1

Sequence Viewer

Length: 1134 bp
ATGGCTTCTTCATTGGAGAGAAAAAGCCATCCCAAAATAAATCATGCTGAGCCTGAGGATGAAATTACAAAGGAAGAGGAAGATGAAAGCTTCTGCTATGCCATCCAGCTGGTGGGTTCTTCTGTGCTCTCCATGTCTCTGCAATCAGCAATTGAGCTTGGCGTTTTTGATATCATAGCCAGAGAGGGTCCAGGCGCCAAGCTCTCTTCGTCTGAGATCGCAGCCAAGATTGGCACCAAGAACCCTGAGGCACCCATGATGGTCGATAGAATCCTCAGGCTCCTCACCAGCCACTCTGTTCTTAATTGCTCTGCTGTTGCTGCTAATGGTGGGTCTGATTTTCAGAGGGTCTACAGCCTTGGCCCTGTGTCTAAGTACTTTGTGAATGATGAAGAAGGTGGTTCTTTGGGCCCCGTGTTGACATTGATTCAAGACAAGGTCTTCATGGAAAGCTGGTCTCAACTGAAAGATGCAGTTGTTGAAGGAGGAATTCCATTTAACAGGGTCCATGGCACGCACGCTTTTGAGTATCCAGGTTTGGACCCCAGGTTTAATCAAGCGTTCAACACAGCAATGTTTAACCTCACCACCATTGTCATCAAGAAACTTCTTCGTATCTACAAGGGTCTTGAAGACAAGAACCTCACACAACTTGTTGATGTTGGTGGTGGTTTGGGAGTGACCCTTAATCTGATCACATCTAGATATCAACATATAAAGGGTATCAATTTCGACTTGCCCCATGTCGTAAATCATGCCCCTTCCTATCCTGGTGTGGAACATGTTGGAGGAGACATGTTTGCTAGTGTTCCAAGTGGGGATGCCATTTTTATGAAGTGGATACTTCATGATTGGAGCGATGAGCACTGCCTAAAGCTGTTGAAGAATTGTTACAAAGCTATTCCTGAAAATGGAAAAGTGATTGTTGTGGAAGGACTACTTCCAGCTATGCCAGATACTAGCACTGCTGTGAAAAGCACTTCCCAACTTGATGTGATGATGCTGACTCAAAATCCGGGAGGGAAGGAGAGGAGTGAACAAGAATTCATGGCCCTAGCAACTGGTGCTGGATTTAGTGGCATCAGATATGAATGTTTTGTCTGTAACTTTTGGGTTATGGAGTTCTTTAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko01058 ko01100 ko01110 map00940 map01058 map01100 map01110
Pfam Domains
Protein Families
Dimerisation Methyltransf_2

Protein Analysis

378

Amino Acids

41.4

Weight (kDa)

5.42

Isoelectric Point (pI)

31.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000357)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g17810 FvH4_7g17811 FvH4_7g17820 FvH4_7g17830
malus_domestica MD00G1100700.v1.1 MD01G1089600.v1.1 MD01G1089800.v1.1 MD01G1090400.v1.1 MD01G1090500.v1.1 MD01G1090800.v1.1 MD04G1141100.v1.1 MD07G1161000.v1.1 MD07G1161100.v1.1 MD10G1030000.v1.1 MD10G1030200.v1.1 MD15G1409200.v1.1 MD15G1409700.v1.1
prunus_persica Prupe.2G199100_v2.0.a1 Prupe.2G199100_v2.0.a1 Prupe.2G199300_v2.0.a1 Prupe.2G199400_v2.0.a1 Prupe.2G199400_v2.0.a1 Prupe.2G199500_v2.0.a1 Prupe.2G199600_v2.0.a1 Prupe.2G199600_v2.0.a1 Prupe.2G199800_v2.0.a1 Prupe.2G200100_v2.0.a1 Prupe.2G200100_v2.0.a1
pyrus_communis pycom01g11360 pycom01g11370 pycom01g11400 pycom01g11440 pycom01g11480 pycom01g11490 pycom07g15690 pycom08g12100
rosa_chinensis RchiOBHm_Chr1g0317931 RchiOBHm_Chr1g0361211 RchiOBHm_Chr1g0361221 RchiOBHm_Chr1g0361241 RchiOBHm_Chr1g0367691 RchiOBHm_Chr4g0390171 RchiOBHm_Chr4g0396271 RchiOBHm_Chr6g0286421
rosa_laevigata RLG00000002555 RLG00000009555 RLG00000027275 RLG00000027731 RLG00000027732 RLG00000027734 RLG00000027738 RLG00000030575
rosa_multiflora Rmu_co8470451.1_g000001 Rmu_sc0000250.1_g000010 Rmu_sc0010379.1_g000006 Rmu_sc0011132.1_g000005 Rmu_sc0011132.1_g000007 Rmu_sc0038028.1_g000001 Rmu_ssc0000008.1_g000043 Rmu_ssc0000234.1_g000002 Rmu_ssc0000418.1_g000001
rosa_roxburghii Rroxscaffold_2G00116370 Rroxscaffold_4G00289300 Rroxscaffold_4G00295130 Rroxscaffold_4G00295140 Rroxscaffold_4G00295160 Rroxscaffold_4G00295190 Rroxscaffold_4G00295220 Rroxscaffold_4G00330100 Rroxscaffold_5G00341100
rosa_rugosa Rorug01G0287600 Rorug01G0287700 Rorug01G0336200 Rorug01G0336200 Rorug03G0350700
rosa_samantha Rh1AG030300 Rh1AG298500 Rh1AG298600 Rh1AG298700 Rh1AG298900 Rh1BG262400 Rh1BG262500 Rh1BG262800 Rh1BG304800 Rh1CG029000 Rh1CG279800 Rh1CG279900 Rh1CG280000 Rh1CG280100 Rh1CG280200 Rh1CG320500 Rh1DG041200 Rh1DG292700 Rh1DG292800 Rh1DG337100 Rh3DG107500 Rh4AG128100 Rh4BG024900 Rh4CG072700 Rh4DG063000 Rh6CG295900 Rh6DG287700
rosa_wichuraiana Rw1G002290 Rw1G026410 Rw1G026420 Rw1G026440 Rw4G005440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 194, 233, 250
AccB7I CCANNNNNTGG 1 cut(s) 112
AccI GTMKAC 1 cut(s) 351
AcsI RAATTY 2 cut(s) 489, 1043
AcyI GRCGYC 1 cut(s) 195
AfaI GTAC 1 cut(s) 377
AfiI CCNNNNNNNGG 2 cut(s) 112, 911
AflIII ACRYGT 2 cut(s) 781, 795
AgsI TTSAA 5 cut(s) 431, 482, 565, 632, 883
AjnI CCWGG 4 cut(s) 190, 532, 545, 769
AleI CACNNNNGTG 1 cut(s) 968
AluBI AGCT 8 cut(s) 90, 109, 157, 202, 453, 877, 899, 947
AluI AGCT 8 cut(s) 90, 109, 157, 202, 453, 877, 899, 947
Alw21I GWGCWC 2 cut(s) 129, 867
Alw26I GTCTC 3 cut(s) 141, 462, 786
AoxI GGCC 3 cut(s) 361, 409, 1050
ApaI GGGCCC 1 cut(s) 413
ApeKI GCWGC 2 cut(s) 221, 320
ApoI RAATTY 2 cut(s) 489, 1043
AspLEI GCGC 1 cut(s) 197
AspS9I GGNCC 7 cut(s) 188, 362, 409, 410, 505, 541, 1051
AsuC2I CCSGG 1 cut(s) 1017
AsuHPI GGTGA 2 cut(s) 277, 577
AvaII GGWCC 3 cut(s) 188, 505, 541
AxyI CCTNAGG 3 cut(s) 54, 246, 275
BaeGI GKGCMC 1 cut(s) 413
BanI GGYRCC 3 cut(s) 194, 233, 250
BanII GRGCYC 1 cut(s) 413
BarI GAAGNNNNNNTAC 2 cut(s) 875, 907
BbsI GAAGAC 2 cut(s) 433, 639
Bbv12I GWGCWC 2 cut(s) 129, 867
BbvI GCAGC 2 cut(s) 233, 307
BccI CCATC 3 cut(s) 36, 110, 253
BciT130I CCWGG 4 cut(s) 192, 534, 547, 771
BciVI GTATCC 2 cut(s) 540, 834
BclI TGATCA 1 cut(s) 693
BcnI CCSGG 1 cut(s) 1017
BcoDI GTCTC 3 cut(s) 141, 462, 786
BfaI CTAG 4 cut(s) 702, 804, 960, 1055
BfmI CTRYAG 1 cut(s) 352
BfoI RGCGCY 1 cut(s) 198
BfuI GTATCC 2 cut(s) 540, 834
BisI GCNGC 2 cut(s) 222, 321
BlpI GCTNAGC 1 cut(s) 48
BlsI GCNGC 2 cut(s) 223, 322
BmcAI AGTACT 1 cut(s) 377
Bme1390I CCNGG 5 cut(s) 192, 534, 547, 771, 1017
Bme18I GGWCC 3 cut(s) 188, 505, 541
BmgT120I GGNCC 7 cut(s) 188, 362, 409, 410, 505, 541, 1051
BmiI GGNNCC 9 cut(s) 189, 196, 235, 252, 281, 411, 412, 506, 543
BmrFI CCNGG 5 cut(s) 192, 534, 547, 771, 1017
BmsI GCATC 4 cut(s) 460, 811, 990, 1089
BpiI GAAGAC 2 cut(s) 433, 639
Bpu1102I GCTNAGC 1 cut(s) 48
BpuMI CCSGG 1 cut(s) 1017
BsaHI GRCGYC 1 cut(s) 195
BsaI GGTCTC 1 cut(s) 462
BsaJI CCNNGG 3 cut(s) 358, 508, 545
Bsc4I CCNNNNNNNGG 2 cut(s) 112, 911
Bse1I ACTGG 1 cut(s) 1066
Bse21I CCTNAGG 3 cut(s) 54, 246, 275
Bse3DI GCAATG 1 cut(s) 579
BseBI CCWGG 4 cut(s) 192, 534, 547, 771
BseDI CCNNGG 3 cut(s) 358, 508, 545
BseGI GGATG 4 cut(s) 28, 64, 102, 826
BseLI CCNNNNNNNGG 2 cut(s) 112, 911
BseMI GCAATG 1 cut(s) 579
BseMII CTCAG 5 cut(s) 39, 45, 204, 237, 289
BseNI ACTGG 1 cut(s) 1066
BseRI GAGGAG 3 cut(s) 272, 804, 1045
BseSI GKGCMC 1 cut(s) 413
BseXI GCAGC 2 cut(s) 233, 307
BshFI GGCC 3 cut(s) 363, 411, 1052
BshNI GGYRCC 3 cut(s) 194, 233, 250
BsiHKAI GWGCWC 2 cut(s) 129, 867
BsiSI CCGG 1 cut(s) 1016
BslI CCNNNNNNNGG 2 cut(s) 112, 911
BsmAI GTCTC 3 cut(s) 141, 462, 786
BsnI GGCC 3 cut(s) 363, 411, 1052
Bso31I GGTCTC 1 cut(s) 462
Bsp120I GGGCCC 1 cut(s) 409
Bsp1286I GDGCHC 3 cut(s) 129, 413, 867
Bsp143I GATC 2 cut(s) 216, 693
Bsp1720I GCTNAGC 1 cut(s) 48
Bsp19I CCATGG 1 cut(s) 508
BspANI GGCC 3 cut(s) 363, 411, 1052
BspCNI CTCAG 5 cut(s) 40, 46, 205, 238, 288
BspHI TCATGA 1 cut(s) 847
BspLI GGNNCC 9 cut(s) 189, 196, 235, 252, 281, 411, 412, 506, 543
BspT107I GGYRCC 3 cut(s) 194, 233, 250
BspTNI GGTCTC 1 cut(s) 462
BsrDI GCAATG 1 cut(s) 579
BsrI ACTGG 1 cut(s) 1066
BssECI CCNNGG 3 cut(s) 358, 508, 545
BssMI GATC 2 cut(s) 216, 693
BssNI GRCGYC 1 cut(s) 195
BssT1I CCWWGG 2 cut(s) 358, 508
Bst2UI CCWGG 4 cut(s) 192, 534, 547, 771
Bst6I CTCTTC 2 cut(s) 69, 211
BstACI GRCGYC 1 cut(s) 195
BstAPI GCANNNNNTGC 1 cut(s) 1064
BstC8I GCNNGC 2 cut(s) 515, 519
BstDEI CTNAG 6 cut(s) 48, 54, 213, 246, 275, 372
BstDSI CCRYGG 1 cut(s) 508
BstF5I GGATG 4 cut(s) 28, 64, 102, 826
BstH2I RGCGCY 1 cut(s) 198
BstHHI GCGC 1 cut(s) 197
BstKTI GATC 2 cut(s) 219, 696
BstMAI GTCTC 3 cut(s) 141, 462, 786
BstMBI GATC 2 cut(s) 216, 693
BstMWI GCNNNNNNNGC 2 cut(s) 320, 1064
BstNI CCWGG 4 cut(s) 192, 534, 547, 771
BstNSI RCATGY 2 cut(s) 785, 799
BstSCI CCNGG 5 cut(s) 190, 532, 545, 769, 1015
BstSFI CTRYAG 1 cut(s) 352
BstSLI GKGCMC 1 cut(s) 413
BstV1I GCAGC 2 cut(s) 233, 307
BstV2I GAAGAC 2 cut(s) 433, 639
BstXI CCANNNNNNTGG 1 cut(s) 109
Bsu36I CCTNAGG 3 cut(s) 54, 246, 275
BsuI GTATCC 2 cut(s) 540, 834
BsuRI GGCC 3 cut(s) 363, 411, 1052
BtgI CCRYGG 1 cut(s) 508
BtgZI GCGATG 1 cut(s) 873
BtsCI GGATG 4 cut(s) 28, 64, 102, 826
BtsI GCAGTG 2 cut(s) 865, 963
BtsIMutI CAGTG 2 cut(s) 865, 963
Cac8I GCNNGC 2 cut(s) 515, 519
CciI TCATGA 1 cut(s) 847
CfoI GCGC 1 cut(s) 197
Cfr13I GGNCC 7 cut(s) 188, 362, 409, 410, 505, 541, 1051
Csp6I GTAC 1 cut(s) 376
CviQI GTAC 1 cut(s) 376
DdeI CTNAG 6 cut(s) 48, 54, 213, 246, 275, 372
DinI GGCGCC 1 cut(s) 196
DpnI GATC 2 cut(s) 218, 695
DpnII GATC 2 cut(s) 216, 693
Eam1104I CTCTTC 2 cut(s) 69, 211
EarI CTCTTC 2 cut(s) 69, 211
Eco130I CCWWGG 2 cut(s) 358, 508
Eco24I GRGCYC 1 cut(s) 413
Eco31I GGTCTC 1 cut(s) 462
Eco32I GATATC 2 cut(s) 172, 707
Eco47I GGWCC 3 cut(s) 188, 505, 541
Eco81I CCTNAGG 3 cut(s) 54, 246, 275
EcoO109I RGGNCCY 1 cut(s) 410
EcoRI GAATTC 2 cut(s) 489, 1043
EcoRII CCWGG 4 cut(s) 190, 532, 545, 769
EcoRV GATATC 2 cut(s) 172, 707
EcoT14I CCWWGG 2 cut(s) 358, 508
EcoT38I GRGCYC 1 cut(s) 413
EgeI GGCGCC 1 cut(s) 196
EheI GGCGCC 1 cut(s) 196
ErhI CCWWGG 2 cut(s) 358, 508
FalI AAGNNNNNCTT 2 cut(s) 924, 956
FbaI TGATCA 1 cut(s) 693
FblI GTMKAC 1 cut(s) 351
Fnu4HI GCNGC 2 cut(s) 222, 321
FokI GGATG 4 cut(s) 15, 71, 89, 833
FriOI GRGCYC 1 cut(s) 413
Fsp4HI GCNGC 2 cut(s) 222, 321
FspBI CTAG 4 cut(s) 702, 804, 960, 1055
GlaI GCGC 1 cut(s) 196
GluI GCNGC 2 cut(s) 222, 321
HaeII RGCGCY 1 cut(s) 198
HaeIII GGCC 3 cut(s) 363, 411, 1052
HapII CCGG 1 cut(s) 1016
HhaI GCGC 1 cut(s) 197
Hin1I GRCGYC 1 cut(s) 195
Hin6I GCGC 1 cut(s) 195
HinP1I GCGC 1 cut(s) 195
HincII GTYRAC 1 cut(s) 420
HindII GTYRAC 1 cut(s) 420
HindIII AAGCTT 1 cut(s) 88
HinfI GANTC 3 cut(s) 270, 427, 1006
HpaII CCGG 1 cut(s) 1016
HphI GGTGA 2 cut(s) 277, 577
Hpy166II GTNNAC 3 cut(s) 352, 420, 1037
Hpy188I TCNGA 5 cut(s) 214, 337, 345, 693, 1085
Hpy188III TCNNGA 6 cut(s) 431, 601, 629, 702, 848, 905
Hpy8I GTNNAC 3 cut(s) 352, 420, 1037
HpyAV CCTTC 5 cut(s) 389, 476, 771, 926, 1018
HpyCH4V TGCA 2 cut(s) 142, 473
HpyF10VI GCNNNNNNNGC 2 cut(s) 320, 1064
HpyF3I CTNAG 6 cut(s) 48, 54, 213, 246, 275, 372
Hsp92I GRCGYC 1 cut(s) 195
HspAI GCGC 1 cut(s) 195
KasI GGCGCC 1 cut(s) 194
Ksp22I TGATCA 1 cut(s) 693
Kzo9I GATC 2 cut(s) 216, 693
LmnI GCTCC 2 cut(s) 285, 855
Lsp1109I GCAGC 2 cut(s) 233, 307
LweI GCATC 4 cut(s) 460, 811, 990, 1089
MaeI CTAG 4 cut(s) 702, 804, 960, 1055
MaeIII GTNAC 3 cut(s) 679, 890, 1103
MalI GATC 2 cut(s) 218, 695
MboI GATC 2 cut(s) 216, 693
MboII GAAGA 9 cut(s) 86, 92, 111, 198, 404, 433, 602, 644, 895
MfeI CAATTG 1 cut(s) 150
MhlI GDGCHC 3 cut(s) 129, 413, 867
MluCI AATT 7 cut(s) 63, 150, 304, 489, 727, 886, 1043
Mly113I GGCGCC 1 cut(s) 195
MlyI GAGTC 1 cut(s) 1000
MmeI TCCRAC 1 cut(s) 766
MseI TTAA 6 cut(s) 303, 498, 552, 579, 687, 1128
MslI CAYNNNNRTG 3 cut(s) 572, 830, 968
MspA1I CMGCKG 1 cut(s) 109
MspI CCGG 1 cut(s) 1016
MspR9I CCNGG 5 cut(s) 192, 534, 547, 771, 1017
MunI CAATTG 1 cut(s) 150
MvaI CCWGG 4 cut(s) 192, 534, 547, 771
MwoI GCNNNNNNNGC 2 cut(s) 320, 1064
NarI GGCGCC 1 cut(s) 195
NciI CCSGG 1 cut(s) 1017
NcoI CCATGG 1 cut(s) 508
NdeII GATC 2 cut(s) 216, 693
NlaIV GGNNCC 9 cut(s) 189, 196, 235, 252, 281, 411, 412, 506, 543
NmuCI GTSAC 1 cut(s) 679
NspI RCATGY 2 cut(s) 785, 799
OliI CACNNNNGTG 1 cut(s) 968
PagI TCATGA 1 cut(s) 847
PciI ACATGT 2 cut(s) 781, 795
PfeI GAWTC 2 cut(s) 270, 427
PflFI GACNNNGTC 1 cut(s) 437
PflMI CCANNNNNTGG 1 cut(s) 112
PfoI TCCNGGA 1 cut(s) 1015
PkrI GCNGC 2 cut(s) 223, 322
PleI GAGTC 1 cut(s) 1000
PluTI GGCGCC 1 cut(s) 198
PpsI GAGTC 1 cut(s) 1000
PscI ACATGT 2 cut(s) 781, 795
Psp6I CCWGG 4 cut(s) 190, 532, 545, 769
PspGI CCWGG 4 cut(s) 190, 532, 545, 769
PspN4I GGNNCC 9 cut(s) 189, 196, 235, 252, 281, 411, 412, 506, 543
PspOMI GGGCCC 1 cut(s) 409
PspPI GGNCC 7 cut(s) 188, 362, 409, 410, 505, 541, 1051
PsyI GACNNNGTC 1 cut(s) 437
PvuII CAGCTG 1 cut(s) 109
RsaI GTAC 1 cut(s) 377
RsaNI GTAC 1 cut(s) 376
RseI CAYNNNNRTG 3 cut(s) 572, 830, 968
SaqAI TTAA 6 cut(s) 303, 498, 552, 579, 687, 1128
SatI GCNGC 2 cut(s) 222, 321
Sau3AI GATC 2 cut(s) 216, 693
Sau96I GGNCC 7 cut(s) 188, 362, 409, 410, 505, 541, 1051
ScaI AGTACT 1 cut(s) 377
SchI GAGTC 1 cut(s) 1000
ScrFI CCNGG 5 cut(s) 192, 534, 547, 771, 1017
SduI GDGCHC 3 cut(s) 129, 413, 867
SfaNI GCATC 4 cut(s) 460, 811, 990, 1089
SfcI CTRYAG 1 cut(s) 352
SfoI GGCGCC 1 cut(s) 196
SinI GGWCC 3 cut(s) 188, 505, 541
SmiMI CAYNNNNRTG 3 cut(s) 572, 830, 968
Sse9I AATT 7 cut(s) 63, 150, 304, 489, 727, 886, 1043
SspDI GGCGCC 1 cut(s) 194
SspMI CTAG 4 cut(s) 702, 804, 960, 1055
StyD4I CCNGG 5 cut(s) 190, 532, 545, 769, 1015
StyI CCWWGG 2 cut(s) 358, 508
TaqI TCGA 2 cut(s) 264, 732
TasI AATT 7 cut(s) 63, 150, 304, 489, 727, 886, 1043
TatI WGTACW 1 cut(s) 375
TfiI GAWTC 2 cut(s) 270, 427
Tru1I TTAA 6 cut(s) 303, 498, 552, 579, 687, 1128
Tru9I TTAA 6 cut(s) 303, 498, 552, 579, 687, 1128
TscAI CASTG 2 cut(s) 872, 970
TseFI GTSAC 1 cut(s) 679
TseI GCWGC 2 cut(s) 221, 320
Tsp45I GTSAC 1 cut(s) 679
TspDTI ATGAA 8 cut(s) 75, 99, 405, 433, 836, 848, 1036, 1104
TspRI CASTG 2 cut(s) 872, 970
Tth111I GACNNNGTC 1 cut(s) 437
Van91I CCANNNNNTGG 1 cut(s) 112
VpaK11BI GGWCC 3 cut(s) 188, 505, 541
XapI RAATTY 2 cut(s) 489, 1043
XbaI TCTAGA 1 cut(s) 701
XceI RCATGY 2 cut(s) 785, 799
XcmI CCANNNNNNNNNTGG 1 cut(s) 109
XmiI GTMKAC 1 cut(s) 351
XspI CTAG 4 cut(s) 702, 804, 960, 1055
ZrmI AGTACT 1 cut(s) 377
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.