FvH4_7g17820
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
15026245 .. 15029032
2788 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g17820.t1

Sequence Viewer

Length: 1152 bp
ATGGCCTCTCAACTGGAAGTAGAAATACAAAGGAGTGTTGATGCTAAAACAAAAGAAGAAGAAGAAAGCAGCTTTGATCATGCTGTTCAGCTAACGATCTCTTCGATGCTGCCCATGTCAATGCAGTCTGCAATTGACCTGGGCCTGTTTGATGTCATCTCCAAAGCGGGTAGGGATGCCAAGCTCTCTGCATCGGACATTGCAGCCGAGATTGGCACCAAGGACCCCCAGGCGCTGGCTATGCTGGATCGCATCCTCAGGCTCCTCACCGCACACTCCGTGCTCAGTTGCTCTGTAGTCACCCGCCAAAGGCTTTACAGCCTCACTGCGGTGTCCAAGCACTTTGTGACTAGTGAAGATGGTGCTTCCTTAACCCCCTTGATGGCATTTCTTCAAGGCAGTGTCGTCATGAACAGTTGGTCACAACTGAAAGATGCAGTTGTTGAGGGAGGAATTCCGTTTAACAGGGTCCATGGCAAACAAGTCTTTGACTACAAGGGTTTTGAACATCTTACCCAGCTTGTTGATGTTGGGGGAGGTCTAGGGGTGGCTCTTGGTCTCATCACTTCCAGATATCCTCATATTAAGGGAATCAACTACGACTTACCTCATGTTATAAAACATGCTCCCCAATATCCTGGTGTAGAACATGTAGGAGGAGACATGTTTTCCAATGTTCCAAGTGGGGATGCCATTTTCATGAAGAACATACTTCATGACTGGATGGACGAGAAATGCATACAGCTATTGAAAAATTGTTACACTATGATTCCAGATAATGGGAAAGTAATAGTTGTGGAAGCACTAGTTCCAGTTGAGCCAGACACTAGCCCTGCTGTGAAGATCTCCTCTGGGTTTGATGCGCTTATGATGACAGTAACCCCAGGAGGGAAGGAAAGAACCCAGCAAGAATTTATGGATTTGGCAACTGCTGCAGGATTTAGTAGCATCAAATTTGAATGTCTTTCAAGTTATCTTCATGCTCACTGGAAACTGAAAGGCAGAACCATAATGGCCTCCCCACTGGAAATAGAAACACTCGCGGATGTTGATGCTAAAAGAAAAGAAGAAGAAAGTAGCTTTGATCATGCGGTTCAGCTTATGCTTTCTTCTGTGTTGCCCATGTCAATGCAGACTGCAATTGACCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

384

Amino Acids

41.84

Weight (kDa)

5.36

Isoelectric Point (pI)

41.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dimerisation PF08100 31 - 118 4.2e-19 O-methyltransferase dimerisation domain
Methyltransf_2 PF00891 165 - 315 5.6e-51 O-methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000357)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g17810 FvH4_7g17811 FvH4_7g17820 FvH4_7g17830
malus_domestica MD00G1100700.v1.1 MD01G1089600.v1.1 MD01G1089800.v1.1 MD01G1090400.v1.1 MD01G1090500.v1.1 MD01G1090800.v1.1 MD04G1141100.v1.1 MD07G1161000.v1.1 MD07G1161100.v1.1 MD10G1030000.v1.1 MD10G1030200.v1.1 MD15G1409200.v1.1 MD15G1409700.v1.1
prunus_persica Prupe.2G199100_v2.0.a1 Prupe.2G199100_v2.0.a1 Prupe.2G199300_v2.0.a1 Prupe.2G199400_v2.0.a1 Prupe.2G199400_v2.0.a1 Prupe.2G199500_v2.0.a1 Prupe.2G199600_v2.0.a1 Prupe.2G199600_v2.0.a1 Prupe.2G199800_v2.0.a1 Prupe.2G200100_v2.0.a1 Prupe.2G200100_v2.0.a1
pyrus_communis pycom01g11360 pycom01g11370 pycom01g11400 pycom01g11440 pycom01g11480 pycom01g11490 pycom07g15690 pycom08g12100
rosa_chinensis RchiOBHm_Chr1g0317931 RchiOBHm_Chr1g0361211 RchiOBHm_Chr1g0361221 RchiOBHm_Chr1g0361241 RchiOBHm_Chr1g0367691 RchiOBHm_Chr4g0390171 RchiOBHm_Chr4g0396271 RchiOBHm_Chr6g0286421
rosa_laevigata RLG00000002555 RLG00000009555 RLG00000027275 RLG00000027731 RLG00000027732 RLG00000027734 RLG00000027738 RLG00000030575
rosa_multiflora Rmu_co8470451.1_g000001 Rmu_sc0000250.1_g000010 Rmu_sc0010379.1_g000006 Rmu_sc0011132.1_g000005 Rmu_sc0011132.1_g000007 Rmu_sc0038028.1_g000001 Rmu_ssc0000008.1_g000043 Rmu_ssc0000234.1_g000002 Rmu_ssc0000418.1_g000001
rosa_roxburghii Rroxscaffold_2G00116370 Rroxscaffold_4G00289300 Rroxscaffold_4G00295130 Rroxscaffold_4G00295140 Rroxscaffold_4G00295160 Rroxscaffold_4G00295190 Rroxscaffold_4G00295220 Rroxscaffold_4G00330100 Rroxscaffold_5G00341100
rosa_rugosa Rorug01G0287600 Rorug01G0287700 Rorug01G0336200 Rorug01G0336200 Rorug03G0350700
rosa_samantha Rh1AG030300 Rh1AG298500 Rh1AG298600 Rh1AG298700 Rh1AG298900 Rh1BG262400 Rh1BG262500 Rh1BG262800 Rh1BG304800 Rh1CG029000 Rh1CG279800 Rh1CG279900 Rh1CG280000 Rh1CG280100 Rh1CG280200 Rh1CG320500 Rh1DG041200 Rh1DG292700 Rh1DG292800 Rh1DG337100 Rh3DG107500 Rh4AG128100 Rh4BG024900 Rh4CG072700 Rh4DG063000 Rh6CG295900 Rh6DG287700
rosa_wichuraiana Rw1G002290 Rw1G026410 Rw1G026420 Rw1G026440 Rw4G005440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 617
AccB1I GGYRCC 1 cut(s) 215
AccB7I CCANNNNNTGG 2 cut(s) 235, 779
AccII CGCG 1 cut(s) 1043
AciI CCGC 6 cut(s) 167, 270, 304, 329, 1043, 1091
AclWI GGATC 1 cut(s) 255
AcsI RAATTY 3 cut(s) 453, 911, 953
AdeI CACNNNGTG 2 cut(s) 280, 346
AfiI CCNNNNNNNGG 6 cut(s) 235, 309, 328, 382, 779, 888
AflIII ACRYGT 2 cut(s) 649, 663
AgsI TTSAA 5 cut(s) 395, 506, 751, 959, 969
AhlI ACTAGT 2 cut(s) 350, 805
AjnI CCWGG 4 cut(s) 138, 228, 637, 883
AleI CACNNNNGTG 1 cut(s) 329
AluBI AGCT 7 cut(s) 72, 91, 184, 520, 745, 1080, 1099
AluI AGCT 7 cut(s) 72, 91, 184, 520, 745, 1080, 1099
Alw21I GWGCWC 1 cut(s) 285
Alw26I GTCTC 2 cut(s) 563, 654
AlwI GGATC 1 cut(s) 255
AlwNI CAGNNNCTG 1 cut(s) 235
AoxI GGCC 3 cut(s) 3, 142, 1014
ApeKI GCWGC 4 cut(s) 69, 109, 203, 932
ApoI RAATTY 3 cut(s) 453, 911, 953
AspLEI GCGC 2 cut(s) 235, 865
AspS9I GGNCC 3 cut(s) 142, 223, 469
AsuHPI GGTGA 2 cut(s) 259, 292
AvaII GGWCC 2 cut(s) 223, 469
AxyI CCTNAGG 1 cut(s) 257
BanI GGYRCC 1 cut(s) 215
BarI GAAGNNNNNNTAC 2 cut(s) 9, 41
Bbv12I GWGCWC 1 cut(s) 285
BbvI GCAGC 4 cut(s) 81, 96, 215, 919
BccI CCATC 3 cut(s) 353, 376, 718
BciT130I CCWGG 4 cut(s) 140, 230, 639, 885
BclI TGATCA 2 cut(s) 76, 1084
BcoDI GTCTC 2 cut(s) 563, 654
BcuI ACTAGT 2 cut(s) 350, 805
BfaI CTAG 4 cut(s) 351, 542, 806, 828
BfmI CTRYAG 2 cut(s) 294, 933
BfoI RGCGCY 1 cut(s) 236
BglII AGATCT 1 cut(s) 843
BisI GCNGC 4 cut(s) 70, 110, 204, 933
BlsI GCNGC 4 cut(s) 71, 111, 205, 934
Bme1390I CCNGG 4 cut(s) 140, 230, 639, 885
Bme18I GGWCC 2 cut(s) 223, 469
BmgT120I GGNCC 3 cut(s) 142, 223, 469
BmiI GGNNCC 4 cut(s) 217, 225, 263, 470
BmrFI CCNGG 4 cut(s) 140, 230, 639, 885
BsaI GGTCTC 1 cut(s) 563
BsaJI CCNNGG 5 cut(s) 139, 219, 228, 472, 883
Bsc4I CCNNNNNNNGG 6 cut(s) 235, 309, 328, 382, 779, 888
Bse1I ACTGG 5 cut(s) 18, 725, 812, 992, 1029
Bse21I CCTNAGG 1 cut(s) 257
Bse3DI GCAATG 1 cut(s) 198
BseBI CCWGG 4 cut(s) 140, 230, 639, 885
BseDI CCNNGG 5 cut(s) 139, 219, 228, 472, 883
BseGI GGATG 5 cut(s) 181, 252, 694, 729, 1051
BseLI CCNNNNNNNGG 6 cut(s) 235, 309, 328, 382, 779, 888
BseMI GCAATG 1 cut(s) 198
BseMII CTCAG 2 cut(s) 271, 298
BseNI ACTGG 5 cut(s) 18, 725, 812, 992, 1029
BseRI GAGGAG 3 cut(s) 254, 672, 838
BseXI GCAGC 4 cut(s) 81, 96, 215, 919
BseYI CCCAGC 2 cut(s) 516, 903
Bsh1236I CGCG 1 cut(s) 1043
BshFI GGCC 3 cut(s) 5, 144, 1016
BshNI GGYRCC 1 cut(s) 215
BsiHKAI GWGCWC 1 cut(s) 285
BslI CCNNNNNNNGG 6 cut(s) 235, 309, 328, 382, 779, 888
BsmAI GTCTC 2 cut(s) 563, 654
BsnI GGCC 3 cut(s) 5, 144, 1016
Bso31I GGTCTC 1 cut(s) 563
Bsp1286I GDGCHC 1 cut(s) 285
Bsp143I GATC 5 cut(s) 76, 96, 247, 843, 1084
Bsp19I CCATGG 1 cut(s) 472
BspACI CCGC 6 cut(s) 167, 270, 304, 329, 1043, 1091
BspANI GGCC 3 cut(s) 5, 144, 1016
BspCNI CTCAG 2 cut(s) 270, 297
BspFNI CGCG 1 cut(s) 1043
BspHI TCATGA 3 cut(s) 408, 699, 715
BspLI GGNNCC 4 cut(s) 217, 225, 263, 470
BspMAI CTGCAG 1 cut(s) 937
BspPI GGATC 1 cut(s) 255
BspT107I GGYRCC 1 cut(s) 215
BspTNI GGTCTC 1 cut(s) 563
BsrDI GCAATG 1 cut(s) 198
BsrI ACTGG 5 cut(s) 18, 725, 812, 992, 1029
BssECI CCNNGG 5 cut(s) 139, 219, 228, 472, 883
BssMI GATC 5 cut(s) 76, 96, 247, 843, 1084
BssT1I CCWWGG 2 cut(s) 219, 472
Bst2UI CCWGG 4 cut(s) 140, 230, 639, 885
Bst4CI ACNGT 2 cut(s) 416, 877
Bst6I CTCTTC 1 cut(s) 106
BstAPI GCANNNNNTGC 1 cut(s) 932
BstC8I GCNNGC 1 cut(s) 237
BstDEI CTNAG 2 cut(s) 257, 284
BstDSI CCRYGG 1 cut(s) 472
BstF5I GGATG 5 cut(s) 181, 252, 694, 729, 1051
BstFNI CGCG 1 cut(s) 1043
BstH2I RGCGCY 1 cut(s) 236
BstHHI GCGC 2 cut(s) 235, 865
BstKTI GATC 5 cut(s) 79, 99, 250, 846, 1087
BstMAI GTCTC 2 cut(s) 563, 654
BstMBI GATC 5 cut(s) 76, 96, 247, 843, 1084
BstMWI GCNNNNNNNGC 2 cut(s) 241, 932
BstNI CCWGG 4 cut(s) 140, 230, 639, 885
BstNSI RCATGY 3 cut(s) 626, 653, 667
BstSCI CCNGG 4 cut(s) 138, 228, 637, 883
BstSFI CTRYAG 2 cut(s) 294, 933
BstUI CGCG 1 cut(s) 1043
BstV1I GCAGC 4 cut(s) 81, 96, 215, 919
BstX2I RGATCY 1 cut(s) 843
BstXI CCANNNNNNTGG 1 cut(s) 638
BstYI RGATCY 1 cut(s) 843
Bsu36I CCTNAGG 1 cut(s) 257
BsuRI GGCC 3 cut(s) 5, 144, 1016
BtgI CCRYGG 1 cut(s) 472
BtsCI GGATG 5 cut(s) 181, 252, 694, 729, 1051
BtsI GCAGTG 2 cut(s) 324, 406
BtsIMutI CAGTG 4 cut(s) 324, 406, 985, 1022
Cac8I GCNNGC 1 cut(s) 237
CaiI CAGNNNCTG 1 cut(s) 235
CciI TCATGA 3 cut(s) 408, 699, 715
CfoI GCGC 2 cut(s) 235, 865
Cfr13I GGNCC 3 cut(s) 142, 223, 469
DdeI CTNAG 2 cut(s) 257, 284
DpnI GATC 5 cut(s) 78, 98, 249, 845, 1086
DpnII GATC 5 cut(s) 76, 96, 247, 843, 1084
DraIII CACNNNGTG 2 cut(s) 280, 346
Eam1104I CTCTTC 1 cut(s) 106
EarI CTCTTC 1 cut(s) 106
Eco130I CCWWGG 2 cut(s) 219, 472
Eco31I GGTCTC 1 cut(s) 563
Eco32I GATATC 1 cut(s) 575
Eco47I GGWCC 2 cut(s) 223, 469
Eco81I CCTNAGG 1 cut(s) 257
EcoO109I RGGNCCY 1 cut(s) 223
EcoRI GAATTC 1 cut(s) 453
EcoRII CCWGG 4 cut(s) 138, 228, 637, 883
EcoRV GATATC 1 cut(s) 575
EcoT14I CCWWGG 2 cut(s) 219, 472
EcoT22I ATGCAT 1 cut(s) 740
ErhI CCWWGG 2 cut(s) 219, 472
FauI CCCGC 2 cut(s) 160, 311
FbaI TGATCA 2 cut(s) 76, 1084
Fnu4HI GCNGC 4 cut(s) 70, 110, 204, 933
FokI GGATG 5 cut(s) 188, 239, 701, 736, 1058
Fsp4HI GCNGC 4 cut(s) 70, 110, 204, 933
FspBI CTAG 4 cut(s) 351, 542, 806, 828
GlaI GCGC 2 cut(s) 234, 864
GluI GCNGC 4 cut(s) 70, 110, 204, 933
GsaI CCCAGC 2 cut(s) 520, 907
HaeII RGCGCY 1 cut(s) 236
HaeIII GGCC 3 cut(s) 5, 144, 1016
HhaI GCGC 2 cut(s) 235, 865
Hin6I GCGC 2 cut(s) 233, 863
HinP1I GCGC 2 cut(s) 233, 863
HinfI GANTC 2 cut(s) 591, 769
HphI GGTGA 2 cut(s) 259, 292
Hpy188I TCNGA 1 cut(s) 196
Hpy188III TCNNGA 5 cut(s) 409, 570, 700, 716, 773
HpyAV CCTTC 1 cut(s) 886
HpyCH4III ACNGT 2 cut(s) 416, 877
HpyCH4V TGCA 9 cut(s) 124, 131, 191, 203, 437, 738, 935, 1132, 1139
HpyF10VI GCNNNNNNNGC 2 cut(s) 241, 932
HpyF3I CTNAG 2 cut(s) 257, 284
HspAI GCGC 2 cut(s) 233, 863
Ksp22I TGATCA 2 cut(s) 76, 1084
Kzo9I GATC 5 cut(s) 76, 96, 247, 843, 1084
LmnI GCTCC 2 cut(s) 267, 631
Lsp1109I GCAGC 4 cut(s) 81, 96, 215, 919
MaeI CTAG 4 cut(s) 351, 542, 806, 828
MaeIII GTNAC 5 cut(s) 298, 346, 420, 758, 877
MalI GATC 5 cut(s) 78, 98, 249, 845, 1086
MboI GATC 5 cut(s) 76, 96, 247, 843, 1084
MfeI CAATTG 2 cut(s) 132, 1140
MflI RGATCY 1 cut(s) 843
MhlI GDGCHC 1 cut(s) 285
MluCI AATT 6 cut(s) 132, 453, 754, 911, 953, 1140
Mph1103I ATGCAT 1 cut(s) 740
MseI TTAA 3 cut(s) 371, 462, 585
MslI CAYNNNNRTG 4 cut(s) 119, 329, 698, 1127
MspR9I CCNGG 4 cut(s) 140, 230, 639, 885
MunI CAATTG 2 cut(s) 132, 1140
MvaI CCWGG 4 cut(s) 140, 230, 639, 885
MvnI CGCG 1 cut(s) 1043
MwoI GCNNNNNNNGC 2 cut(s) 241, 932
NcoI CCATGG 1 cut(s) 472
NdeII GATC 5 cut(s) 76, 96, 247, 843, 1084
NlaIV GGNNCC 4 cut(s) 217, 225, 263, 470
NmeAIII GCCGAG 1 cut(s) 232
NmuCI GTSAC 3 cut(s) 298, 346, 420
NsiI ATGCAT 1 cut(s) 740
NspI RCATGY 3 cut(s) 626, 653, 667
OliI CACNNNNGTG 1 cut(s) 329
PagI TCATGA 3 cut(s) 408, 699, 715
PciI ACATGT 2 cut(s) 649, 663
PcsI WCGNNNNNNNCGW 1 cut(s) 101
PfeI GAWTC 2 cut(s) 591, 769
PflMI CCANNNNNTGG 2 cut(s) 235, 779
PkrI GCNGC 4 cut(s) 71, 111, 205, 934
PpuMI RGGWCCY 1 cut(s) 223
PscI ACATGT 2 cut(s) 649, 663
PsiI TTATAA 1 cut(s) 617
Psp5II RGGWCCY 1 cut(s) 223
Psp6I CCWGG 4 cut(s) 138, 228, 637, 883
PspFI CCCAGC 2 cut(s) 516, 903
PspGI CCWGG 4 cut(s) 138, 228, 637, 883
PspN4I GGNNCC 4 cut(s) 217, 225, 263, 470
PspPI GGNCC 3 cut(s) 142, 223, 469
PspPPI RGGWCCY 1 cut(s) 223
PstI CTGCAG 1 cut(s) 937
PstNI CAGNNNCTG 1 cut(s) 235
PsuI RGATCY 1 cut(s) 843
RseI CAYNNNNRTG 4 cut(s) 119, 329, 698, 1127
SaqAI TTAA 3 cut(s) 371, 462, 585
SatI GCNGC 4 cut(s) 70, 110, 204, 933
Sau3AI GATC 5 cut(s) 76, 96, 247, 843, 1084
Sau96I GGNCC 3 cut(s) 142, 223, 469
ScrFI CCNGG 4 cut(s) 140, 230, 639, 885
SduI GDGCHC 1 cut(s) 285
SfcI CTRYAG 2 cut(s) 294, 933
SinI GGWCC 2 cut(s) 223, 469
SmiMI CAYNNNNRTG 4 cut(s) 119, 329, 698, 1127
SpeI ACTAGT 2 cut(s) 350, 805
Sse9I AATT 6 cut(s) 132, 453, 754, 911, 953, 1140
SsiI CCGC 6 cut(s) 167, 270, 304, 329, 1043, 1091
SspMI CTAG 4 cut(s) 351, 542, 806, 828
StyD4I CCNGG 4 cut(s) 138, 228, 637, 883
StyI CCWWGG 2 cut(s) 219, 472
TaaI ACNGT 2 cut(s) 416, 877
TaqI TCGA 1 cut(s) 104
TasI AATT 6 cut(s) 132, 453, 754, 911, 953, 1140
TfiI GAWTC 2 cut(s) 591, 769
Tru1I TTAA 3 cut(s) 371, 462, 585
Tru9I TTAA 3 cut(s) 371, 462, 585
TscAI CASTG 4 cut(s) 331, 406, 992, 1029
TseFI GTSAC 3 cut(s) 298, 346, 420
TseI GCWGC 4 cut(s) 69, 109, 203, 932
Tsp45I GTSAC 3 cut(s) 298, 346, 420
TspDTI ATGAA 5 cut(s) 425, 688, 704, 716, 968
TspGWI ACGGA 2 cut(s) 268, 447
TspRI CASTG 4 cut(s) 331, 406, 992, 1029
Van91I CCANNNNNTGG 2 cut(s) 235, 779
VpaK11BI GGWCC 2 cut(s) 223, 469
XapI RAATTY 3 cut(s) 453, 911, 953
XceI RCATGY 3 cut(s) 626, 653, 667
XspI CTAG 4 cut(s) 351, 542, 806, 828
Zsp2I ATGCAT 1 cut(s) 740
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.