Prupe.2G200100_v2.0.a1
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000357
Physical Location & Seq
Reverse (-)
23716843 .. 23720040
3198 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G200100.2

Sequence Viewer

Length: 732 bp
ATGGCTTCTTCATTGGAGAGAAAAAGCCATCCCAAAATAAATCATGCTGAGCCTGAGGATGAAATTACAAAGGAAGAGGAAGATGAAAGCTTCTGCTATGCCATCCAGCTGGTGGGTTCTTCTGTGCTGTCCATGTCTCTGCAATCAGCAATTGAGCTTGGCGTTTTTGATATCATAGCCAGAGAGGGTCCAGGCGCCAAGCTCTCTTCGTCTGAGATCGCAGCCAAGATTGGCACCAAGAACCCTGAGGCACCCATGATGGTCGATAGAATCCTCAGGCTCCTCACCAGCCACTCTGTTCTTAATTGCTCTGCTGTTGCTGCTAATGGTGGGTCTGATTTTCAGAGGGTCTACAGCCTTGGCCCTGTGTCTAAGTACTTTGTGAATGAAGAAGAAGGTGGTTCTTTGGGCCCCGTGTTGACATTGATTCAAGACAAGGTCTTCATGGAAAGCTGGTCTCAACTGAAAGATGCAGTTGTTGAAGGAGGAATTCCATTTAACAGGGTCCATGGCACGCACGCTTTTGAGTATCCAGGTTTGGACCCCAGGTTTAATCAAGCGTTCAACACAGCAATGTTTAACCTCACCACCATTGTCATCAAGAAACTTCTTCATATCTACAAGGGCCTTGAAGACAAGAACGTCACACAACTTGTTAATCTGATCACATCTAGATGGTATCAATTTCAACTTGCCCCATGTCGTAAATCATGCCCCTTCCTATCCTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko01058 ko01100 ko01110 map00940 map01058 map01100 map01110
Pfam Domains
Protein Families
Dimerisation Methyltransf_2

Protein Analysis

244

Amino Acids

26.93

Weight (kDa)

5.72

Isoelectric Point (pI)

41.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000357)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g17810 FvH4_7g17811 FvH4_7g17820 FvH4_7g17830
malus_domestica MD00G1100700.v1.1 MD01G1089600.v1.1 MD01G1089800.v1.1 MD01G1090400.v1.1 MD01G1090500.v1.1 MD01G1090800.v1.1 MD04G1141100.v1.1 MD07G1161000.v1.1 MD07G1161100.v1.1 MD10G1030000.v1.1 MD10G1030200.v1.1 MD15G1409200.v1.1 MD15G1409700.v1.1
prunus_persica Prupe.2G199100_v2.0.a1 Prupe.2G199100_v2.0.a1 Prupe.2G199300_v2.0.a1 Prupe.2G199400_v2.0.a1 Prupe.2G199400_v2.0.a1 Prupe.2G199500_v2.0.a1 Prupe.2G199600_v2.0.a1 Prupe.2G199600_v2.0.a1 Prupe.2G199800_v2.0.a1 Prupe.2G200100_v2.0.a1 Prupe.2G200100_v2.0.a1
pyrus_communis pycom01g11360 pycom01g11370 pycom01g11400 pycom01g11440 pycom01g11480 pycom01g11490 pycom07g15690 pycom08g12100
rosa_chinensis RchiOBHm_Chr1g0317931 RchiOBHm_Chr1g0361211 RchiOBHm_Chr1g0361221 RchiOBHm_Chr1g0361241 RchiOBHm_Chr1g0367691 RchiOBHm_Chr4g0390171 RchiOBHm_Chr4g0396271 RchiOBHm_Chr6g0286421
rosa_laevigata RLG00000002555 RLG00000009555 RLG00000027275 RLG00000027731 RLG00000027732 RLG00000027734 RLG00000027738 RLG00000030575
rosa_multiflora Rmu_co8470451.1_g000001 Rmu_sc0000250.1_g000010 Rmu_sc0010379.1_g000006 Rmu_sc0011132.1_g000005 Rmu_sc0011132.1_g000007 Rmu_sc0038028.1_g000001 Rmu_ssc0000008.1_g000043 Rmu_ssc0000234.1_g000002 Rmu_ssc0000418.1_g000001
rosa_roxburghii Rroxscaffold_2G00116370 Rroxscaffold_4G00289300 Rroxscaffold_4G00295130 Rroxscaffold_4G00295140 Rroxscaffold_4G00295160 Rroxscaffold_4G00295190 Rroxscaffold_4G00295220 Rroxscaffold_4G00330100 Rroxscaffold_5G00341100
rosa_rugosa Rorug01G0287600 Rorug01G0287700 Rorug01G0336200 Rorug01G0336200 Rorug03G0350700
rosa_samantha Rh1AG030300 Rh1AG298500 Rh1AG298600 Rh1AG298700 Rh1AG298900 Rh1BG262400 Rh1BG262500 Rh1BG262800 Rh1BG304800 Rh1CG029000 Rh1CG279800 Rh1CG279900 Rh1CG280000 Rh1CG280100 Rh1CG280200 Rh1CG320500 Rh1DG041200 Rh1DG292700 Rh1DG292800 Rh1DG337100 Rh3DG107500 Rh4AG128100 Rh4BG024900 Rh4CG072700 Rh4DG063000 Rh6CG295900 Rh6DG287700
rosa_wichuraiana Rw1G002290 Rw1G026410 Rw1G026420 Rw1G026440 Rw4G005440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 641
AccB1I GGYRCC 3 cut(s) 194, 233, 250
AccB7I CCANNNNNTGG 1 cut(s) 112
AccI GTMKAC 1 cut(s) 351
AcsI RAATTY 1 cut(s) 489
AcyI GRCGYC 1 cut(s) 195
AfaI GTAC 1 cut(s) 377
AfiI CCNNNNNNNGG 1 cut(s) 112
AgsI TTSAA 5 cut(s) 431, 482, 565, 632, 689
AjnI CCWGG 4 cut(s) 190, 532, 545, 725
AluBI AGCT 5 cut(s) 90, 109, 157, 202, 453
AluI AGCT 5 cut(s) 90, 109, 157, 202, 453
Alw26I GTCTC 2 cut(s) 141, 462
AoxI GGCC 3 cut(s) 361, 409, 625
ApaI GGGCCC 1 cut(s) 413
ApeKI GCWGC 2 cut(s) 221, 320
ApoI RAATTY 1 cut(s) 489
AspLEI GCGC 1 cut(s) 197
AspS9I GGNCC 7 cut(s) 188, 362, 409, 410, 505, 541, 625
AsuHPI GGTGA 2 cut(s) 277, 577
AvaII GGWCC 3 cut(s) 188, 505, 541
AxyI CCTNAGG 3 cut(s) 54, 246, 275
BaeGI GKGCMC 1 cut(s) 413
BanI GGYRCC 3 cut(s) 194, 233, 250
BanII GRGCYC 1 cut(s) 413
BbsI GAAGAC 2 cut(s) 433, 639
BbvI GCAGC 2 cut(s) 233, 307
BccI CCATC 4 cut(s) 36, 110, 253, 669
BciT130I CCWGG 4 cut(s) 192, 534, 547, 727
BciVI GTATCC 1 cut(s) 540
BclI TGATCA 1 cut(s) 663
BcoDI GTCTC 2 cut(s) 141, 462
BfaI CTAG 1 cut(s) 672
BfmI CTRYAG 1 cut(s) 352
BfoI RGCGCY 1 cut(s) 198
BfuI GTATCC 1 cut(s) 540
BisI GCNGC 2 cut(s) 222, 321
BlpI GCTNAGC 1 cut(s) 48
BlsI GCNGC 2 cut(s) 223, 322
BmcAI AGTACT 1 cut(s) 377
Bme1390I CCNGG 4 cut(s) 192, 534, 547, 727
Bme18I GGWCC 3 cut(s) 188, 505, 541
BmgT120I GGNCC 7 cut(s) 188, 362, 409, 410, 505, 541, 625
BmiI GGNNCC 9 cut(s) 189, 196, 235, 252, 281, 411, 412, 506, 543
BmrFI CCNGG 4 cut(s) 192, 534, 547, 727
BmsI GCATC 1 cut(s) 460
BpiI GAAGAC 2 cut(s) 433, 639
Bpu1102I GCTNAGC 1 cut(s) 48
BsaHI GRCGYC 1 cut(s) 195
BsaI GGTCTC 1 cut(s) 462
BsaJI CCNNGG 3 cut(s) 358, 508, 545
Bsc4I CCNNNNNNNGG 1 cut(s) 112
Bse21I CCTNAGG 3 cut(s) 54, 246, 275
Bse3DI GCAATG 1 cut(s) 579
BseBI CCWGG 4 cut(s) 192, 534, 547, 727
BseDI CCNNGG 3 cut(s) 358, 508, 545
BseGI GGATG 3 cut(s) 28, 64, 102
BseLI CCNNNNNNNGG 1 cut(s) 112
BseMI GCAATG 1 cut(s) 579
BseMII CTCAG 5 cut(s) 39, 45, 204, 237, 289
BseRI GAGGAG 1 cut(s) 272
BseSI GKGCMC 1 cut(s) 413
BseXI GCAGC 2 cut(s) 233, 307
BshFI GGCC 3 cut(s) 363, 411, 627
BshNI GGYRCC 3 cut(s) 194, 233, 250
BslI CCNNNNNNNGG 1 cut(s) 112
BsmAI GTCTC 2 cut(s) 141, 462
BsnI GGCC 3 cut(s) 363, 411, 627
Bso31I GGTCTC 1 cut(s) 462
Bsp120I GGGCCC 1 cut(s) 409
Bsp1286I GDGCHC 1 cut(s) 413
Bsp143I GATC 2 cut(s) 216, 663
Bsp1720I GCTNAGC 1 cut(s) 48
Bsp19I CCATGG 1 cut(s) 508
BspANI GGCC 3 cut(s) 363, 411, 627
BspCNI CTCAG 5 cut(s) 40, 46, 205, 238, 288
BspLI GGNNCC 9 cut(s) 189, 196, 235, 252, 281, 411, 412, 506, 543
BspT107I GGYRCC 3 cut(s) 194, 233, 250
BspTNI GGTCTC 1 cut(s) 462
BsrDI GCAATG 1 cut(s) 579
BssECI CCNNGG 3 cut(s) 358, 508, 545
BssMI GATC 2 cut(s) 216, 663
BssNI GRCGYC 1 cut(s) 195
BssT1I CCWWGG 2 cut(s) 358, 508
Bst2UI CCWGG 4 cut(s) 192, 534, 547, 727
Bst6I CTCTTC 2 cut(s) 69, 211
BstACI GRCGYC 1 cut(s) 195
BstC8I GCNNGC 2 cut(s) 515, 519
BstDEI CTNAG 6 cut(s) 48, 54, 213, 246, 275, 372
BstDSI CCRYGG 1 cut(s) 508
BstF5I GGATG 3 cut(s) 28, 64, 102
BstH2I RGCGCY 1 cut(s) 198
BstHHI GCGC 1 cut(s) 197
BstKTI GATC 2 cut(s) 219, 666
BstMAI GTCTC 2 cut(s) 141, 462
BstMBI GATC 2 cut(s) 216, 663
BstMWI GCNNNNNNNGC 1 cut(s) 320
BstNI CCWGG 4 cut(s) 192, 534, 547, 727
BstSCI CCNGG 4 cut(s) 190, 532, 545, 725
BstSFI CTRYAG 1 cut(s) 352
BstSLI GKGCMC 1 cut(s) 413
BstV1I GCAGC 2 cut(s) 233, 307
BstV2I GAAGAC 2 cut(s) 433, 639
BstXI CCANNNNNNTGG 1 cut(s) 109
Bsu36I CCTNAGG 3 cut(s) 54, 246, 275
BsuI GTATCC 1 cut(s) 540
BsuRI GGCC 3 cut(s) 363, 411, 627
BtgI CCRYGG 1 cut(s) 508
BtsCI GGATG 3 cut(s) 28, 64, 102
Cac8I GCNNGC 2 cut(s) 515, 519
CfoI GCGC 1 cut(s) 197
Cfr13I GGNCC 7 cut(s) 188, 362, 409, 410, 505, 541, 625
Csp6I GTAC 1 cut(s) 376
CviAII CATG 7 cut(s) 44, 133, 256, 445, 509, 699, 711
CviQI GTAC 1 cut(s) 376
DdeI CTNAG 6 cut(s) 48, 54, 213, 246, 275, 372
DinI GGCGCC 1 cut(s) 196
DpnI GATC 2 cut(s) 218, 665
DpnII GATC 2 cut(s) 216, 663
DrdI GACNNNNNNGTC 1 cut(s) 641
DseDI GACNNNNNNGTC 1 cut(s) 641
Eam1104I CTCTTC 2 cut(s) 69, 211
EarI CTCTTC 2 cut(s) 69, 211
Eco130I CCWWGG 2 cut(s) 358, 508
Eco24I GRGCYC 1 cut(s) 413
Eco31I GGTCTC 1 cut(s) 462
Eco32I GATATC 1 cut(s) 172
Eco47I GGWCC 3 cut(s) 188, 505, 541
Eco81I CCTNAGG 3 cut(s) 54, 246, 275
EcoO109I RGGNCCY 2 cut(s) 410, 625
EcoRI GAATTC 1 cut(s) 489
EcoRII CCWGG 4 cut(s) 190, 532, 545, 725
EcoRV GATATC 1 cut(s) 172
EcoT14I CCWWGG 2 cut(s) 358, 508
EcoT38I GRGCYC 1 cut(s) 413
EgeI GGCGCC 1 cut(s) 196
EheI GGCGCC 1 cut(s) 196
ErhI CCWWGG 2 cut(s) 358, 508
FaeI CATG 7 cut(s) 47, 136, 259, 448, 512, 702, 714
FatI CATG 7 cut(s) 43, 132, 255, 444, 508, 698, 710
FbaI TGATCA 1 cut(s) 663
FblI GTMKAC 1 cut(s) 351
Fnu4HI GCNGC 2 cut(s) 222, 321
FokI GGATG 3 cut(s) 15, 71, 89
FriOI GRGCYC 1 cut(s) 413
Fsp4HI GCNGC 2 cut(s) 222, 321
FspBI CTAG 1 cut(s) 672
GlaI GCGC 1 cut(s) 196
GluI GCNGC 2 cut(s) 222, 321
HaeII RGCGCY 1 cut(s) 198
HaeIII GGCC 3 cut(s) 363, 411, 627
HhaI GCGC 1 cut(s) 197
Hin1I GRCGYC 1 cut(s) 195
Hin1II CATG 7 cut(s) 47, 136, 259, 448, 512, 702, 714
Hin6I GCGC 1 cut(s) 195
HinP1I GCGC 1 cut(s) 195
HincII GTYRAC 1 cut(s) 420
HindII GTYRAC 1 cut(s) 420
HindIII AAGCTT 1 cut(s) 88
HinfI GANTC 2 cut(s) 270, 427
HphI GGTGA 2 cut(s) 277, 577
Hpy166II GTNNAC 2 cut(s) 352, 420
Hpy188I TCNGA 4 cut(s) 214, 337, 345, 663
Hpy188III TCNNGA 3 cut(s) 431, 601, 672
Hpy8I GTNNAC 2 cut(s) 352, 420
HpyAV CCTTC 3 cut(s) 389, 476, 727
HpyCH4IV ACGT 1 cut(s) 642
HpyCH4V TGCA 2 cut(s) 142, 473
HpyF10VI GCNNNNNNNGC 1 cut(s) 320
HpyF3I CTNAG 6 cut(s) 48, 54, 213, 246, 275, 372
HpySE526I ACGT 1 cut(s) 642
Hsp92I GRCGYC 1 cut(s) 195
Hsp92II CATG 7 cut(s) 47, 136, 259, 448, 512, 702, 714
HspAI GCGC 1 cut(s) 195
KasI GGCGCC 1 cut(s) 194
Ksp22I TGATCA 1 cut(s) 663
Kzo9I GATC 2 cut(s) 216, 663
LmnI GCTCC 1 cut(s) 285
Lsp1109I GCAGC 2 cut(s) 233, 307
LweI GCATC 1 cut(s) 460
MaeI CTAG 1 cut(s) 672
MaeII ACGT 1 cut(s) 642
MaeIII GTNAC 1 cut(s) 643
MalI GATC 2 cut(s) 218, 665
MboI GATC 2 cut(s) 216, 663
MboII GAAGA 9 cut(s) 86, 92, 111, 198, 401, 404, 433, 602, 644
MfeI CAATTG 1 cut(s) 150
MhlI GDGCHC 1 cut(s) 413
MluCI AATT 5 cut(s) 63, 150, 304, 489, 683
Mly113I GGCGCC 1 cut(s) 195
MnlI CCTC 9 cut(s) 49, 70, 178, 241, 284, 293, 339, 479, 593
MseI TTAA 5 cut(s) 303, 498, 552, 579, 657
MslI CAYNNNNRTG 2 cut(s) 572, 673
MspA1I CMGCKG 1 cut(s) 109
MspR9I CCNGG 4 cut(s) 192, 534, 547, 727
MunI CAATTG 1 cut(s) 150
MvaI CCWGG 4 cut(s) 192, 534, 547, 727
MwoI GCNNNNNNNGC 1 cut(s) 320
NarI GGCGCC 1 cut(s) 195
NcoI CCATGG 1 cut(s) 508
NdeII GATC 2 cut(s) 216, 663
NlaIII CATG 7 cut(s) 47, 136, 259, 448, 512, 702, 714
NlaIV GGNNCC 9 cut(s) 189, 196, 235, 252, 281, 411, 412, 506, 543
NmuCI GTSAC 1 cut(s) 643
PfeI GAWTC 2 cut(s) 270, 427
PflFI GACNNNGTC 1 cut(s) 437
PflMI CCANNNNNTGG 1 cut(s) 112
PkrI GCNGC 2 cut(s) 223, 322
PluTI GGCGCC 1 cut(s) 198
Psp6I CCWGG 4 cut(s) 190, 532, 545, 725
PspGI CCWGG 4 cut(s) 190, 532, 545, 725
PspN4I GGNNCC 9 cut(s) 189, 196, 235, 252, 281, 411, 412, 506, 543
PspOMI GGGCCC 1 cut(s) 409
PspPI GGNCC 7 cut(s) 188, 362, 409, 410, 505, 541, 625
PsyI GACNNNGTC 1 cut(s) 437
PvuII CAGCTG 1 cut(s) 109
RsaI GTAC 1 cut(s) 377
RsaNI GTAC 1 cut(s) 376
RseI CAYNNNNRTG 2 cut(s) 572, 673
SaqAI TTAA 5 cut(s) 303, 498, 552, 579, 657
SatI GCNGC 2 cut(s) 222, 321
Sau3AI GATC 2 cut(s) 216, 663
Sau96I GGNCC 7 cut(s) 188, 362, 409, 410, 505, 541, 625
ScaI AGTACT 1 cut(s) 377
ScrFI CCNGG 4 cut(s) 192, 534, 547, 727
SduI GDGCHC 1 cut(s) 413
SfaNI GCATC 1 cut(s) 460
SfcI CTRYAG 1 cut(s) 352
SfoI GGCGCC 1 cut(s) 196
SinI GGWCC 3 cut(s) 188, 505, 541
SmiMI CAYNNNNRTG 2 cut(s) 572, 673
Sse9I AATT 5 cut(s) 63, 150, 304, 489, 683
SspDI GGCGCC 1 cut(s) 194
SspMI CTAG 1 cut(s) 672
StyD4I CCNGG 4 cut(s) 190, 532, 545, 725
StyI CCWWGG 2 cut(s) 358, 508
TaiI ACGT 1 cut(s) 645
TaqI TCGA 1 cut(s) 264
TasI AATT 5 cut(s) 63, 150, 304, 489, 683
TatI WGTACW 1 cut(s) 375
TfiI GAWTC 2 cut(s) 270, 427
Tru1I TTAA 5 cut(s) 303, 498, 552, 579, 657
Tru9I TTAA 5 cut(s) 303, 498, 552, 579, 657
TseFI GTSAC 1 cut(s) 643
TseI GCWGC 2 cut(s) 221, 320
Tsp45I GTSAC 1 cut(s) 643
TspDTI ATGAA 5 cut(s) 75, 99, 402, 433, 602
Tth111I GACNNNGTC 1 cut(s) 437
Van91I CCANNNNNTGG 1 cut(s) 112
VpaK11BI GGWCC 3 cut(s) 188, 505, 541
XapI RAATTY 1 cut(s) 489
XbaI TCTAGA 1 cut(s) 671
XcmI CCANNNNNNNNNTGG 1 cut(s) 109
XmiI GTMKAC 1 cut(s) 351
XspI CTAG 1 cut(s) 672
ZrmI AGTACT 1 cut(s) 377
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.