MD15G1409700.v1.1
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
50923028 .. 50925407
2380 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1409700.v1.1.491

Sequence Viewer

Length: 1074 bp
ATGGCCCTGCAGCTGGAAGAAGAGGAAAACTTCGGCTGTGCCATGCAGCTGGTGTTTTCTTCTGTGCTGTCCATGTCTATGCAATCAGCAATCGAGCTAGGCGTTTTCGACATCATAGTGAAAGCCGGTCCTGGTGCCAATCTGTCTTCATCAGAGATTGCAGCCCATATCGGCAGCGGCACCAGGAATTCTGAGGCACCGATGATGTTGGATCGTATTCTAAGGCTCCTAGCCAGTTACTCTATTCTCAGCTGCTCTGTCGTTGCTAATGAAGATGGGTCTGATTCTCAGAGGCTCTACAGCCTTGGTCCTGTGTCCAACTACTTTGTGACTAATGAAGATGGTGTTTCTTTCGGTCCCATGATGGCATTGATGCAAGACAAGGTCGTCCTAGACTCCTGGTCCCAACTGAAAGATGCAGTTGTTGAAGGAGGAATTCCATTTAACAGGGTCTATGGCAAGGGGTGTTTTGAGTACCTAGGTTTAGACCCCAGGTTTAATCAAGTTTTCAACACAGCAATGTTTAACCACACCACTATTGTCACCAACAAGATTCTTCATCTCTACAAGGGTTTTGAGAAAATTACCCAACTTGTTGATGTTGGTGGTGGTTTGGGAGTCACCATTAGTCTAATCACTTCTAAGCATCCCCATATTAAGGGTATCAATTATGACTTGCCTCATGTCATAAAACATGCCGCTTCATATCCTGGGGTAGAACATGTTGGAGGAGACATGTTTGCAAGTGTTCCATCTGGGGATGCCATTTTGTTGAAGTGGATACTTCACAATTGGAGTGACCAACACTGCCTAAAGCTGTTGGAAAATTGTTACAATGCTATTCCAGACGATGGAAAAGTGATTATTGTGGAAGCACTTCTTCCAGTGATGCCAGAGACTAGCACCGCCGTGAAGAGCACCTCCCTACTTGATGTGCTTATGCTGAGTCAAAACAGGGGAGGAAAGGAGCGGAGCCGAGAAGAGTTCATGACTTTGGCAACTGGTGCTGGATTTAGTGGCATTAAATATGAATGTTTTTTTTCCAGCTTTTGCGTGATGGAGATGTTTAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

358

Amino Acids

39.02

Weight (kDa)

5.28

Isoelectric Point (pI)

32.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dimerisation PF08100 15 - 111 2.2e-20 O-methyltransferase dimerisation domain
Methyltransf_2 PF00891 134 - 339 2e-66 O-methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000357)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g17810 FvH4_7g17811 FvH4_7g17820 FvH4_7g17830
malus_domestica MD00G1100700.v1.1 MD01G1089600.v1.1 MD01G1089800.v1.1 MD01G1090400.v1.1 MD01G1090500.v1.1 MD01G1090800.v1.1 MD04G1141100.v1.1 MD07G1161000.v1.1 MD07G1161100.v1.1 MD10G1030000.v1.1 MD10G1030200.v1.1 MD15G1409200.v1.1 MD15G1409700.v1.1
prunus_persica Prupe.2G199100_v2.0.a1 Prupe.2G199100_v2.0.a1 Prupe.2G199300_v2.0.a1 Prupe.2G199400_v2.0.a1 Prupe.2G199400_v2.0.a1 Prupe.2G199500_v2.0.a1 Prupe.2G199600_v2.0.a1 Prupe.2G199600_v2.0.a1 Prupe.2G199800_v2.0.a1 Prupe.2G200100_v2.0.a1 Prupe.2G200100_v2.0.a1
pyrus_communis pycom01g11360 pycom01g11370 pycom01g11400 pycom01g11440 pycom01g11480 pycom01g11490 pycom07g15690 pycom08g12100
rosa_chinensis RchiOBHm_Chr1g0317931 RchiOBHm_Chr1g0361211 RchiOBHm_Chr1g0361221 RchiOBHm_Chr1g0361241 RchiOBHm_Chr1g0367691 RchiOBHm_Chr4g0390171 RchiOBHm_Chr4g0396271 RchiOBHm_Chr6g0286421
rosa_laevigata RLG00000002555 RLG00000009555 RLG00000027275 RLG00000027731 RLG00000027732 RLG00000027734 RLG00000027738 RLG00000030575
rosa_multiflora Rmu_co8470451.1_g000001 Rmu_sc0000250.1_g000010 Rmu_sc0010379.1_g000006 Rmu_sc0011132.1_g000005 Rmu_sc0011132.1_g000007 Rmu_sc0038028.1_g000001 Rmu_ssc0000008.1_g000043 Rmu_ssc0000234.1_g000002 Rmu_ssc0000418.1_g000001
rosa_roxburghii Rroxscaffold_2G00116370 Rroxscaffold_4G00289300 Rroxscaffold_4G00295130 Rroxscaffold_4G00295140 Rroxscaffold_4G00295160 Rroxscaffold_4G00295190 Rroxscaffold_4G00295220 Rroxscaffold_4G00330100 Rroxscaffold_5G00341100
rosa_rugosa Rorug01G0287600 Rorug01G0287700 Rorug01G0336200 Rorug01G0336200 Rorug03G0350700
rosa_samantha Rh1AG030300 Rh1AG298500 Rh1AG298600 Rh1AG298700 Rh1AG298900 Rh1BG262400 Rh1BG262500 Rh1BG262800 Rh1BG304800 Rh1CG029000 Rh1CG279800 Rh1CG279900 Rh1CG280000 Rh1CG280100 Rh1CG280200 Rh1CG320500 Rh1DG041200 Rh1DG292700 Rh1DG292800 Rh1DG337100 Rh3DG107500 Rh4AG128100 Rh4BG024900 Rh4CG072700 Rh4DG063000 Rh6CG295900 Rh6DG287700
rosa_wichuraiana Rw1G002290 Rw1G026410 Rw1G026420 Rw1G026440 Rw4G005440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 386
AccB1I GGYRCC 3 cut(s) 134, 179, 196
AccB7I CCANNNNNTGG 1 cut(s) 851
AccBSI CCGCTC 1 cut(s) 970
AciI CCGC 4 cut(s) 177, 699, 906, 970
AclWI GGATC 1 cut(s) 219
AcsI RAATTY 2 cut(s) 187, 435
AfaI GTAC 1 cut(s) 476
AfiI CCNNNNNNNGG 3 cut(s) 13, 658, 851
AflIII ACRYGT 2 cut(s) 721, 735
AgsI TTSAA 3 cut(s) 428, 511, 775
AhdI GACNNNNNGTC 1 cut(s) 400
AjnI CCWGG 5 cut(s) 130, 182, 398, 491, 709
AleI CACNNNNGTG 1 cut(s) 908
AluBI AGCT 6 cut(s) 13, 49, 97, 252, 817, 1047
AluI AGCT 6 cut(s) 13, 49, 97, 252, 817, 1047
Alw21I GWGCWC 1 cut(s) 920
Alw26I GTCTC 2 cut(s) 726, 890
AlwI GGATC 1 cut(s) 219
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 5 cut(s) 10, 46, 161, 174, 252
ApoI RAATTY 2 cut(s) 187, 435
Asp700I GAANNNNTTC 1 cut(s) 876
AspA2I CCTAGG 1 cut(s) 478
AspS9I GGNCC 5 cut(s) 4, 128, 308, 356, 402
AsuHPI GGTGA 2 cut(s) 535, 613
AvaII GGWCC 4 cut(s) 128, 308, 356, 402
AvrII CCTAGG 1 cut(s) 478
BanI GGYRCC 3 cut(s) 134, 179, 196
BbsI GAAGAC 1 cut(s) 138
Bbv12I GWGCWC 1 cut(s) 920
BbvI GCAGC 5 cut(s) 22, 58, 173, 186, 239
BccI CCATC 6 cut(s) 269, 335, 358, 760, 845, 1051
BceAI ACGGC 1 cut(s) 893
BciT130I CCWGG 5 cut(s) 132, 184, 400, 493, 711
BciVI GTATCC 1 cut(s) 774
BcoDI GTCTC 2 cut(s) 726, 890
BfaI CTAG 5 cut(s) 98, 230, 392, 479, 900
BfmI CTRYAG 2 cut(s) 8, 298
BfuI GTATCC 1 cut(s) 774
BisI GCNGC 7 cut(s) 11, 47, 162, 175, 178, 253, 699
BlnI CCTAGG 1 cut(s) 478
BlsI GCNGC 7 cut(s) 12, 48, 163, 176, 179, 254, 700
Bme1390I CCNGG 5 cut(s) 132, 184, 400, 493, 711
Bme18I GGWCC 4 cut(s) 128, 308, 356, 402
BmeRI GACNNNNNGTC 1 cut(s) 400
BmgT120I GGNCC 5 cut(s) 4, 128, 308, 356, 402
BmiI GGNNCC 7 cut(s) 136, 181, 198, 227, 358, 404, 974
BmrFI CCNGG 5 cut(s) 132, 184, 400, 493, 711
BmsI GCATC 5 cut(s) 363, 406, 655, 751, 879
BpiI GAAGAC 1 cut(s) 138
BsaJI CCNNGG 4 cut(s) 304, 478, 491, 710
Bsc4I CCNNNNNNNGG 3 cut(s) 13, 658, 851
Bse118I RCCGGY 1 cut(s) 125
Bse1I ACTGG 3 cut(s) 234, 884, 1006
Bse3DI GCAATG 1 cut(s) 525
BseBI CCWGG 5 cut(s) 132, 184, 400, 493, 711
BseDI CCNNGG 4 cut(s) 304, 478, 491, 710
BseGI GGATG 2 cut(s) 646, 766
BseLI CCNNNNNNNGG 3 cut(s) 13, 658, 851
BseMI GCAATG 1 cut(s) 525
BseMII CTCAG 4 cut(s) 183, 262, 302, 935
BseNI ACTGG 3 cut(s) 234, 884, 1006
BseRI GAGGAG 1 cut(s) 744
BseXI GCAGC 5 cut(s) 22, 58, 173, 186, 239
BshFI GGCC 1 cut(s) 5
BshNI GGYRCC 3 cut(s) 134, 179, 196
BsiHKAI GWGCWC 1 cut(s) 920
BsiSI CCGG 1 cut(s) 126
BslFI GGGAC 2 cut(s) 342, 388
BslI CCNNNNNNNGG 3 cut(s) 13, 658, 851
BsmAI GTCTC 2 cut(s) 726, 890
BsmFI GGGAC 2 cut(s) 342, 388
BsnI GGCC 1 cut(s) 5
Bsp1286I GDGCHC 1 cut(s) 920
Bsp143I GATC 1 cut(s) 211
BspACI CCGC 4 cut(s) 177, 699, 906, 970
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 4 cut(s) 184, 261, 301, 936
BspHI TCATGA 1 cut(s) 987
BspLI GGNNCC 7 cut(s) 136, 181, 198, 227, 358, 404, 974
BspMAI CTGCAG 1 cut(s) 12
BspPI GGATC 1 cut(s) 219
BspQI GCTCTTC 1 cut(s) 908
BspT107I GGYRCC 3 cut(s) 134, 179, 196
BsrBI CCGCTC 1 cut(s) 970
BsrDI GCAATG 1 cut(s) 525
BsrFI RCCGGY 1 cut(s) 125
BsrI ACTGG 3 cut(s) 234, 884, 1006
BssAI RCCGGY 1 cut(s) 125
BssECI CCNNGG 4 cut(s) 304, 478, 491, 710
BssMI GATC 1 cut(s) 211
BssT1I CCWWGG 2 cut(s) 304, 478
Bst2UI CCWGG 5 cut(s) 132, 184, 400, 493, 711
Bst6I CTCTTC 3 cut(s) 15, 908, 975
BstAPI GCANNNNNTGC 1 cut(s) 1004
BstDEI CTNAG 6 cut(s) 192, 221, 248, 288, 642, 944
BstF5I GGATG 2 cut(s) 646, 766
BstKTI GATC 1 cut(s) 214
BstMAI GTCTC 2 cut(s) 726, 890
BstMBI GATC 1 cut(s) 211
BstMWI GCNNNNNNNGC 1 cut(s) 1004
BstNI CCWGG 5 cut(s) 132, 184, 400, 493, 711
BstNSI RCATGY 3 cut(s) 698, 725, 739
BstSCI CCNGG 5 cut(s) 130, 182, 398, 491, 709
BstSFI CTRYAG 2 cut(s) 8, 298
BstV1I GCAGC 5 cut(s) 22, 58, 173, 186, 239
BstV2I GAAGAC 1 cut(s) 138
BstXI CCANNNNNNTGG 1 cut(s) 49
BsuI GTATCC 1 cut(s) 774
BsuRI GGCC 1 cut(s) 5
BtsCI GGATG 2 cut(s) 646, 766
BtsI GCAGTG 1 cut(s) 805
BtsIMutI CAGTG 2 cut(s) 805, 891
CciI TCATGA 1 cut(s) 987
Cfr10I RCCGGY 1 cut(s) 125
Cfr13I GGNCC 5 cut(s) 4, 128, 308, 356, 402
Csp6I GTAC 1 cut(s) 475
CviAII CATG 8 cut(s) 43, 73, 361, 683, 695, 722, 736, 988
CviQI GTAC 1 cut(s) 475
DdeI CTNAG 6 cut(s) 192, 221, 248, 288, 642, 944
DpnI GATC 1 cut(s) 213
DpnII GATC 1 cut(s) 211
DrdI GACNNNNNNGTC 1 cut(s) 386
DriI GACNNNNNGTC 1 cut(s) 400
DseDI GACNNNNNNGTC 1 cut(s) 386
Eam1104I CTCTTC 3 cut(s) 15, 908, 975
Eam1105I GACNNNNNGTC 1 cut(s) 400
EarI CTCTTC 3 cut(s) 15, 908, 975
Eco130I CCWWGG 2 cut(s) 304, 478
Eco47I GGWCC 4 cut(s) 128, 308, 356, 402
EcoRI GAATTC 2 cut(s) 187, 435
EcoRII CCWGG 5 cut(s) 130, 182, 398, 491, 709
EcoT14I CCWWGG 2 cut(s) 304, 478
ErhI CCWWGG 2 cut(s) 304, 478
FaeI CATG 8 cut(s) 46, 76, 364, 686, 698, 725, 739, 991
FalI AAGNNNNNCTT 2 cut(s) 864, 896
FaqI GGGAC 2 cut(s) 342, 388
FatI CATG 8 cut(s) 42, 72, 360, 682, 694, 721, 735, 987
Fnu4HI GCNGC 7 cut(s) 11, 47, 162, 175, 178, 253, 699
FokI GGATG 2 cut(s) 633, 773
Fsp4HI GCNGC 7 cut(s) 11, 47, 162, 175, 178, 253, 699
FspBI CTAG 5 cut(s) 98, 230, 392, 479, 900
GluI GCNGC 7 cut(s) 11, 47, 162, 175, 178, 253, 699
HaeIII GGCC 1 cut(s) 5
HapII CCGG 1 cut(s) 126
Hin1II CATG 8 cut(s) 46, 76, 364, 686, 698, 725, 739, 991
HinfI GANTC 5 cut(s) 284, 395, 553, 618, 946
HpaII CCGG 1 cut(s) 126
HphI GGTGA 2 cut(s) 535, 613
Hpy188I TCNGA 4 cut(s) 154, 193, 283, 291
Hpy188III TCNNGA 2 cut(s) 845, 988
HpyAV CCTTC 1 cut(s) 422
HpyCH4V TGCA 7 cut(s) 10, 46, 82, 161, 376, 419, 743
HpyF10VI GCNNNNNNNGC 1 cut(s) 1004
HpyF3I CTNAG 6 cut(s) 192, 221, 248, 288, 642, 944
Hsp92II CATG 8 cut(s) 46, 76, 364, 686, 698, 725, 739, 991
Kzo9I GATC 1 cut(s) 211
LguI GCTCTTC 1 cut(s) 908
LmnI GCTCC 3 cut(s) 231, 967, 972
Lsp1109I GCAGC 5 cut(s) 22, 58, 173, 186, 239
LweI GCATC 5 cut(s) 363, 406, 655, 751, 879
MaeI CTAG 5 cut(s) 98, 230, 392, 479, 900
MaeIII GTNAC 6 cut(s) 236, 328, 541, 619, 797, 830
MalI GATC 1 cut(s) 213
MbiI CCGCTC 1 cut(s) 970
MboI GATC 1 cut(s) 211
MfeI CAATTG 1 cut(s) 790
MhlI GDGCHC 1 cut(s) 920
MluCI AATT 6 cut(s) 187, 435, 582, 667, 790, 826
MlyI GAGTC 3 cut(s) 389, 627, 955
MmeI TCCRAC 4 cut(s) 189, 342, 706, 801
MnlI CCTC 8 cut(s) 16, 187, 285, 425, 690, 722, 931, 953
MroXI GAANNNNTTC 1 cut(s) 876
MseI TTAA 6 cut(s) 444, 498, 525, 657, 1023, 1068
MslI CAYNNNNRTG 4 cut(s) 77, 116, 518, 908
MspA1I CMGCKG 4 cut(s) 13, 49, 177, 252
MspI CCGG 1 cut(s) 126
MspR9I CCNGG 5 cut(s) 132, 184, 400, 493, 711
MunI CAATTG 1 cut(s) 790
MvaI CCWGG 5 cut(s) 132, 184, 400, 493, 711
MwoI GCNNNNNNNGC 1 cut(s) 1004
NdeII GATC 1 cut(s) 211
NlaIII CATG 8 cut(s) 46, 76, 364, 686, 698, 725, 739, 991
NlaIV GGNNCC 7 cut(s) 136, 181, 198, 227, 358, 404, 974
NmeAIII GCCGAG 1 cut(s) 1001
NmuCI GTSAC 4 cut(s) 328, 541, 619, 797
NspI RCATGY 3 cut(s) 698, 725, 739
OliI CACNNNNGTG 1 cut(s) 908
PagI TCATGA 1 cut(s) 987
PciI ACATGT 2 cut(s) 721, 735
PciSI GCTCTTC 1 cut(s) 908
PcsI WCGNNNNNNNCGW 1 cut(s) 99
PdmI GAANNNNTTC 1 cut(s) 876
PfeI GAWTC 2 cut(s) 284, 553
PflFI GACNNNGTC 1 cut(s) 383
PflMI CCANNNNNTGG 1 cut(s) 851
PkrI GCNGC 7 cut(s) 12, 48, 163, 176, 179, 254, 700
PleI GAGTC 3 cut(s) 389, 626, 954
PpsI GAGTC 3 cut(s) 389, 626, 954
PscI ACATGT 2 cut(s) 721, 735
Psp6I CCWGG 5 cut(s) 130, 182, 398, 491, 709
PspGI CCWGG 5 cut(s) 130, 182, 398, 491, 709
PspN4I GGNNCC 7 cut(s) 136, 181, 198, 227, 358, 404, 974
PspPI GGNCC 5 cut(s) 4, 128, 308, 356, 402
PstI CTGCAG 1 cut(s) 12
PsyI GACNNNGTC 1 cut(s) 383
PvuII CAGCTG 3 cut(s) 13, 49, 252
RsaI GTAC 1 cut(s) 476
RsaNI GTAC 1 cut(s) 475
RseI CAYNNNNRTG 4 cut(s) 77, 116, 518, 908
SapI GCTCTTC 1 cut(s) 908
SaqAI TTAA 6 cut(s) 444, 498, 525, 657, 1023, 1068
SatI GCNGC 7 cut(s) 11, 47, 162, 175, 178, 253, 699
Sau3AI GATC 1 cut(s) 211
Sau96I GGNCC 5 cut(s) 4, 128, 308, 356, 402
SchI GAGTC 3 cut(s) 389, 627, 955
ScrFI CCNGG 5 cut(s) 132, 184, 400, 493, 711
SduI GDGCHC 1 cut(s) 920
SfaNI GCATC 5 cut(s) 363, 406, 655, 751, 879
SfcI CTRYAG 2 cut(s) 8, 298
SinI GGWCC 4 cut(s) 128, 308, 356, 402
SmiMI CAYNNNNRTG 4 cut(s) 77, 116, 518, 908
Sse9I AATT 6 cut(s) 187, 435, 582, 667, 790, 826
SsiI CCGC 4 cut(s) 177, 699, 906, 970
SspMI CTAG 5 cut(s) 98, 230, 392, 479, 900
StyD4I CCNGG 5 cut(s) 130, 182, 398, 491, 709
StyI CCWWGG 2 cut(s) 304, 478
TaqI TCGA 2 cut(s) 93, 108
TaqII GACCGA 1 cut(s) 344
TasI AATT 6 cut(s) 187, 435, 582, 667, 790, 826
TauI GCSGC 2 cut(s) 180, 701
TfiI GAWTC 2 cut(s) 284, 553
Tru1I TTAA 6 cut(s) 444, 498, 525, 657, 1023, 1068
Tru9I TTAA 6 cut(s) 444, 498, 525, 657, 1023, 1068
TscAI CASTG 2 cut(s) 812, 891
TseFI GTSAC 4 cut(s) 328, 541, 619, 797
TseI GCWGC 5 cut(s) 10, 46, 161, 174, 252
Tsp45I GTSAC 4 cut(s) 328, 541, 619, 797
TspDTI ATGAA 7 cut(s) 138, 285, 351, 548, 693, 976, 1044
TspRI CASTG 2 cut(s) 812, 891
Tth111I GACNNNGTC 1 cut(s) 383
Van91I CCANNNNNTGG 1 cut(s) 851
VpaK11BI GGWCC 4 cut(s) 128, 308, 356, 402
XapI RAATTY 2 cut(s) 187, 435
XceI RCATGY 3 cut(s) 698, 725, 739
XmaJI CCTAGG 1 cut(s) 478
XmnI GAANNNNTTC 1 cut(s) 876
XspI CTAG 5 cut(s) 98, 230, 392, 479, 900
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.