MD01G1090400.v1.1
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Reverse (-)
20496060 .. 20497576
1517 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1090400.v1.1.491

Sequence Viewer

Length: 1077 bp
ATGGCCCTGCAGCTGGAAGAAGAGGAAAACTTCGGCTATGCCATGCAGATTGCGTTTTCTTCAGTGCTGTCCATGTCTATGCAATCAGCAATCGAGTTAGGCGTTTTCGACATCATAGCAAAAGCCGGTCCTGGTGCCAAGCTCTCTTCATCAGAGATTGTAGCCCATATCGGCAGCGGCACCAGGAATTCTGAGGCACCGATGATGTTGGACCGTATTCTAAGGCTCCTAGCCAGTCACTCTATTCTCATCTGCTCTTTTGTTGCTAATGAAGAAGATGGGTCTGATTCTCAAAGGCTCTACAGCCTTGGCCCTGTGTCCAACTACTTTGTGACTAATGAAGATGGTGTTTCTTTAGGCCCCTTGATGTCATTCATTCAAGACAAGATCTTACTAGACAACTGGCCCCAGCTAAAAGAAGCAGTTACTGAAGGAGGAACTCCATTTAAGAGGGTCCATGGTATCCATTCTTTTGAGTATCTAGATTTAGACCCCAGGTTTAATCAAGTTTTCAGCACAGGAATGTTTAACCACACCGCTATTGTCATGAAGAAGATTGTTCATGTCTACAAGGGTTTTGAGAAACTTACTCAACTTGTTGACGTTGGCGGTAATGTGGGAGTGAATCTTAGTGTAATCACTTCTAAATATCCTCATATTAAGGGTATCAATTTCGACTTGCCTCATGTTGTAAAACATGCCCCTTCATATCCTGGGGTCGAACATGTTGGAGGAGACATGTTGGCAAGTGTTCCATCTGGGGATGCCATTTTTATGAAGTGGATACTTCACGATTGGAATGACCAAGACTGCATAAAGTTGTTGAAAAATTGTTACAACGCTATTCCAGACAATGGAAAAGTGATTATCGTGGAAGCACTTCTTCCGGCGATGCCAGAGACTAGCACCGCCGTGAAGAGCACATCCCAGATTGATGTGCTTATGCTGACTCTTAACCGGGGAGCAAAGGAGCGGAGCCGAGAAGAGTTCATGGCTTTGGCAACTGGTGCTGGATTTAGAGGCATTAAATATGAATGTTTTGTCTGTAATTGTTGGGTGATGGAGATCTTTAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

359

Amino Acids

39.47

Weight (kDa)

5.57

Isoelectric Point (pI)

34.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dimerisation PF08100 15 - 112 8.5e-19 O-methyltransferase dimerisation domain
Methyltransf_2 PF00891 135 - 340 6.9e-64 O-methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000357)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g17810 FvH4_7g17811 FvH4_7g17820 FvH4_7g17830
malus_domestica MD00G1100700.v1.1 MD01G1089600.v1.1 MD01G1089800.v1.1 MD01G1090400.v1.1 MD01G1090500.v1.1 MD01G1090800.v1.1 MD04G1141100.v1.1 MD07G1161000.v1.1 MD07G1161100.v1.1 MD10G1030000.v1.1 MD10G1030200.v1.1 MD15G1409200.v1.1 MD15G1409700.v1.1
prunus_persica Prupe.2G199100_v2.0.a1 Prupe.2G199100_v2.0.a1 Prupe.2G199300_v2.0.a1 Prupe.2G199400_v2.0.a1 Prupe.2G199400_v2.0.a1 Prupe.2G199500_v2.0.a1 Prupe.2G199600_v2.0.a1 Prupe.2G199600_v2.0.a1 Prupe.2G199800_v2.0.a1 Prupe.2G200100_v2.0.a1 Prupe.2G200100_v2.0.a1
pyrus_communis pycom01g11360 pycom01g11370 pycom01g11400 pycom01g11440 pycom01g11480 pycom01g11490 pycom07g15690 pycom08g12100
rosa_chinensis RchiOBHm_Chr1g0317931 RchiOBHm_Chr1g0361211 RchiOBHm_Chr1g0361221 RchiOBHm_Chr1g0361241 RchiOBHm_Chr1g0367691 RchiOBHm_Chr4g0390171 RchiOBHm_Chr4g0396271 RchiOBHm_Chr6g0286421
rosa_laevigata RLG00000002555 RLG00000009555 RLG00000027275 RLG00000027731 RLG00000027732 RLG00000027734 RLG00000027738 RLG00000030575
rosa_multiflora Rmu_co8470451.1_g000001 Rmu_sc0000250.1_g000010 Rmu_sc0010379.1_g000006 Rmu_sc0011132.1_g000005 Rmu_sc0011132.1_g000007 Rmu_sc0038028.1_g000001 Rmu_ssc0000008.1_g000043 Rmu_ssc0000234.1_g000002 Rmu_ssc0000418.1_g000001
rosa_roxburghii Rroxscaffold_2G00116370 Rroxscaffold_4G00289300 Rroxscaffold_4G00295130 Rroxscaffold_4G00295140 Rroxscaffold_4G00295160 Rroxscaffold_4G00295190 Rroxscaffold_4G00295220 Rroxscaffold_4G00330100 Rroxscaffold_5G00341100
rosa_rugosa Rorug01G0287600 Rorug01G0287700 Rorug01G0336200 Rorug01G0336200 Rorug03G0350700
rosa_samantha Rh1AG030300 Rh1AG298500 Rh1AG298600 Rh1AG298700 Rh1AG298900 Rh1BG262400 Rh1BG262500 Rh1BG262800 Rh1BG304800 Rh1CG029000 Rh1CG279800 Rh1CG279900 Rh1CG280000 Rh1CG280100 Rh1CG280200 Rh1CG320500 Rh1DG041200 Rh1DG292700 Rh1DG292800 Rh1DG337100 Rh3DG107500 Rh4AG128100 Rh4BG024900 Rh4CG072700 Rh4DG063000 Rh6CG295900 Rh6DG287700
rosa_wichuraiana Rw1G002290 Rw1G026410 Rw1G026420 Rw1G026440 Rw4G005440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 134, 179, 196
AccB7I CCANNNNNTGG 1 cut(s) 854
AccBSI CCGCTC 1 cut(s) 973
AccI GTMKAC 1 cut(s) 567
AciI CCGC 5 cut(s) 177, 537, 609, 909, 973
AcsI RAATTY 1 cut(s) 187
AcuI CTGAAG 2 cut(s) 45, 450
AfiI CCNNNNNNNGG 2 cut(s) 13, 854
AflIII ACRYGT 2 cut(s) 724, 738
AgsI TTSAA 2 cut(s) 380, 826
AjnI CCWGG 4 cut(s) 130, 182, 494, 712
AleI CACNNNNGTG 1 cut(s) 911
AluBI AGCT 3 cut(s) 13, 142, 412
AluI AGCT 3 cut(s) 13, 142, 412
Alw21I GWGCWC 1 cut(s) 923
Alw26I GTCTC 2 cut(s) 729, 893
AlwNI CAGNNNCTG 1 cut(s) 428
AoxI GGCC 4 cut(s) 3, 310, 358, 404
ApeKI GCWGC 2 cut(s) 10, 174
ApoI RAATTY 1 cut(s) 187
Asp700I GAANNNNTTC 1 cut(s) 879
AspS9I GGNCC 7 cut(s) 4, 128, 211, 311, 359, 405, 454
AsuC2I CCSGG 1 cut(s) 959
AsuHPI GGTGA 1 cut(s) 1069
AvaII GGWCC 3 cut(s) 128, 211, 454
BanI GGYRCC 3 cut(s) 134, 179, 196
Bbv12I GWGCWC 1 cut(s) 923
BbvI GCAGC 2 cut(s) 22, 186
BccI CCATC 4 cut(s) 272, 338, 763, 1054
BceAI ACGGC 1 cut(s) 896
BciT130I CCWGG 4 cut(s) 132, 184, 496, 714
BciVI GTATCC 2 cut(s) 473, 777
BcnI CCSGG 1 cut(s) 959
BcoDI GTCTC 2 cut(s) 729, 893
BfaI CTAG 4 cut(s) 230, 395, 482, 903
BfmI CTRYAG 2 cut(s) 8, 301
BfuI GTATCC 2 cut(s) 473, 777
BglII AGATCT 2 cut(s) 387, 1065
BisI GCNGC 3 cut(s) 11, 175, 178
BlsI GCNGC 3 cut(s) 12, 176, 179
Bme1390I CCNGG 5 cut(s) 132, 184, 496, 714, 959
Bme18I GGWCC 3 cut(s) 128, 211, 454
BmgT120I GGNCC 7 cut(s) 4, 128, 211, 311, 359, 405, 454
BmiI GGNNCC 8 cut(s) 136, 181, 198, 227, 361, 407, 455, 977
BmrFI CCNGG 5 cut(s) 132, 184, 496, 714, 959
BmsI GCATC 2 cut(s) 754, 882
BpuMI CCSGG 1 cut(s) 959
BsaBI GATNNNNATC 1 cut(s) 1064
BsaJI CCNNGG 5 cut(s) 307, 457, 494, 713, 958
Bsc4I CCNNNNNNNGG 2 cut(s) 13, 854
Bse118I RCCGGY 1 cut(s) 125
Bse1I ACTGG 3 cut(s) 234, 407, 1009
Bse8I GATNNNNATC 1 cut(s) 1064
BseBI CCWGG 4 cut(s) 132, 184, 496, 714
BseDI CCNNGG 5 cut(s) 307, 457, 494, 713, 958
BseGI GGATG 2 cut(s) 769, 923
BseJI GATNNNNATC 1 cut(s) 1064
BseLI CCNNNNNNNGG 2 cut(s) 13, 854
BseMII CTCAG 1 cut(s) 183
BseNI ACTGG 3 cut(s) 234, 407, 1009
BseRI GAGGAG 1 cut(s) 747
BseXI GCAGC 2 cut(s) 22, 186
BseYI CCCAGC 1 cut(s) 408
BshFI GGCC 4 cut(s) 5, 312, 360, 406
BshNI GGYRCC 3 cut(s) 134, 179, 196
BsiHKAI GWGCWC 1 cut(s) 923
BsiSI CCGG 3 cut(s) 126, 887, 958
BslI CCNNNNNNNGG 2 cut(s) 13, 854
BsmAI GTCTC 2 cut(s) 729, 893
BsnI GGCC 4 cut(s) 5, 312, 360, 406
Bsp1286I GDGCHC 1 cut(s) 923
Bsp143I GATC 2 cut(s) 387, 1065
Bsp19I CCATGG 1 cut(s) 457
BspACI CCGC 5 cut(s) 177, 537, 609, 909, 973
BspANI GGCC 4 cut(s) 5, 312, 360, 406
BspCNI CTCAG 1 cut(s) 184
BspHI TCATGA 1 cut(s) 546
BspLI GGNNCC 8 cut(s) 136, 181, 198, 227, 361, 407, 455, 977
BspMAI CTGCAG 1 cut(s) 12
BspQI GCTCTTC 1 cut(s) 911
BspT107I GGYRCC 3 cut(s) 134, 179, 196
BsrBI CCGCTC 1 cut(s) 973
BsrFI RCCGGY 1 cut(s) 125
BsrI ACTGG 3 cut(s) 234, 407, 1009
BssAI RCCGGY 1 cut(s) 125
BssECI CCNNGG 5 cut(s) 307, 457, 494, 713, 958
BssMI GATC 2 cut(s) 387, 1065
BssT1I CCWWGG 2 cut(s) 307, 457
Bst2UI CCWGG 4 cut(s) 132, 184, 496, 714
Bst4CI ACNGT 1 cut(s) 215
Bst6I CTCTTC 4 cut(s) 15, 151, 911, 978
BstAPI GCANNNNNTGC 1 cut(s) 1007
BstDEI CTNAG 3 cut(s) 192, 221, 629
BstDSI CCRYGG 1 cut(s) 457
BstF5I GGATG 2 cut(s) 769, 923
BstKTI GATC 2 cut(s) 390, 1068
BstMAI GTCTC 2 cut(s) 729, 893
BstMBI GATC 2 cut(s) 387, 1065
BstMWI GCNNNNNNNGC 1 cut(s) 1007
BstNI CCWGG 4 cut(s) 132, 184, 496, 714
BstNSI RCATGY 3 cut(s) 701, 728, 742
BstSCI CCNGG 5 cut(s) 130, 182, 494, 712, 957
BstSFI CTRYAG 2 cut(s) 8, 301
BstV1I GCAGC 2 cut(s) 22, 186
BstX2I RGATCY 2 cut(s) 387, 1065
BstYI RGATCY 2 cut(s) 387, 1065
BsuI GTATCC 2 cut(s) 473, 777
BsuRI GGCC 4 cut(s) 5, 312, 360, 406
BtgI CCRYGG 1 cut(s) 457
BtgZI GCGATG 1 cut(s) 905
BtsCI GGATG 2 cut(s) 769, 923
BtsIMutI CAGTG 1 cut(s) 69
CaiI CAGNNNCTG 1 cut(s) 428
CciI TCATGA 1 cut(s) 546
Cfr10I RCCGGY 1 cut(s) 125
Cfr13I GGNCC 7 cut(s) 4, 128, 211, 311, 359, 405, 454
DdeI CTNAG 3 cut(s) 192, 221, 629
DpnI GATC 2 cut(s) 389, 1067
DpnII GATC 2 cut(s) 387, 1065
Eam1104I CTCTTC 4 cut(s) 15, 151, 911, 978
EarI CTCTTC 4 cut(s) 15, 151, 911, 978
Eco130I CCWWGG 2 cut(s) 307, 457
Eco47I GGWCC 3 cut(s) 128, 211, 454
Eco57I CTGAAG 2 cut(s) 45, 450
EcoO109I RGGNCCY 1 cut(s) 359
EcoRI GAATTC 1 cut(s) 187
EcoRII CCWGG 4 cut(s) 130, 182, 494, 712
EcoT14I CCWWGG 2 cut(s) 307, 457
ErhI CCWWGG 2 cut(s) 307, 457
FalI AAGNNNNNCTT 2 cut(s) 867, 899
FblI GTMKAC 1 cut(s) 567
Fnu4HI GCNGC 3 cut(s) 11, 175, 178
FokI GGATG 2 cut(s) 776, 910
Fsp4HI GCNGC 3 cut(s) 11, 175, 178
FspBI CTAG 4 cut(s) 230, 395, 482, 903
GluI GCNGC 3 cut(s) 11, 175, 178
GsaI CCCAGC 1 cut(s) 412
HaeIII GGCC 4 cut(s) 5, 312, 360, 406
HapII CCGG 3 cut(s) 126, 887, 958
HincII GTYRAC 1 cut(s) 601
HindII GTYRAC 1 cut(s) 601
HinfI GANTC 3 cut(s) 287, 625, 949
HpaII CCGG 3 cut(s) 126, 887, 958
HphI GGTGA 1 cut(s) 1069
Hpy166II GTNNAC 2 cut(s) 568, 601
Hpy188I TCNGA 3 cut(s) 154, 193, 286
Hpy188III TCNNGA 5 cut(s) 380, 482, 547, 791, 848
Hpy8I GTNNAC 2 cut(s) 568, 601
HpyAV CCTTC 2 cut(s) 425, 714
HpyCH4III ACNGT 1 cut(s) 215
HpyCH4IV ACGT 1 cut(s) 603
HpyCH4V TGCA 4 cut(s) 10, 46, 82, 813
HpyF10VI GCNNNNNNNGC 1 cut(s) 1007
HpyF3I CTNAG 3 cut(s) 192, 221, 629
HpySE526I ACGT 1 cut(s) 603
Kzo9I GATC 2 cut(s) 387, 1065
LguI GCTCTTC 1 cut(s) 911
LmnI GCTCC 4 cut(s) 231, 962, 970, 975
Lsp1109I GCAGC 2 cut(s) 22, 186
LweI GCATC 2 cut(s) 754, 882
MaeI CTAG 4 cut(s) 230, 395, 482, 903
MaeII ACGT 1 cut(s) 603
MaeIII GTNAC 4 cut(s) 236, 331, 424, 833
MalI GATC 2 cut(s) 389, 1067
MbiI CCGCTC 1 cut(s) 973
MboI GATC 2 cut(s) 387, 1065
MflI RGATCY 2 cut(s) 387, 1065
MhlI GDGCHC 1 cut(s) 923
MluCI AATT 4 cut(s) 187, 670, 829, 1048
MlyI GAGTC 1 cut(s) 943
MmeI TCCRAC 3 cut(s) 189, 345, 709
MnlI CCTC 8 cut(s) 16, 187, 428, 444, 663, 693, 725, 1013
MroXI GAANNNNTTC 1 cut(s) 879
MseI TTAA 7 cut(s) 447, 501, 528, 660, 954, 1026, 1071
MslI CAYNNNNRTG 4 cut(s) 77, 521, 773, 911
MspA1I CMGCKG 2 cut(s) 13, 177
MspI CCGG 3 cut(s) 126, 887, 958
MspR9I CCNGG 5 cut(s) 132, 184, 496, 714, 959
MvaI CCWGG 4 cut(s) 132, 184, 496, 714
MwoI GCNNNNNNNGC 1 cut(s) 1007
NciI CCSGG 1 cut(s) 959
NcoI CCATGG 1 cut(s) 457
NdeII GATC 2 cut(s) 387, 1065
NlaIV GGNNCC 8 cut(s) 136, 181, 198, 227, 361, 407, 455, 977
NmeAIII GCCGAG 1 cut(s) 1004
NmuCI GTSAC 2 cut(s) 236, 331
NspI RCATGY 3 cut(s) 701, 728, 742
OliI CACNNNNGTG 1 cut(s) 911
PagI TCATGA 1 cut(s) 546
PciI ACATGT 2 cut(s) 724, 738
PciSI GCTCTTC 1 cut(s) 911
PcsI WCGNNNNNNNCGW 1 cut(s) 99
PdmI GAANNNNTTC 1 cut(s) 879
PfeI GAWTC 2 cut(s) 287, 625
PflMI CCANNNNNTGG 1 cut(s) 854
PkrI GCNGC 3 cut(s) 12, 176, 179
PleI GAGTC 1 cut(s) 943
PpsI GAGTC 1 cut(s) 943
PscI ACATGT 2 cut(s) 724, 738
Psp6I CCWGG 4 cut(s) 130, 182, 494, 712
PspFI CCCAGC 1 cut(s) 408
PspGI CCWGG 4 cut(s) 130, 182, 494, 712
PspN4I GGNNCC 8 cut(s) 136, 181, 198, 227, 361, 407, 455, 977
PspPI GGNCC 7 cut(s) 4, 128, 211, 311, 359, 405, 454
PstI CTGCAG 1 cut(s) 12
PstNI CAGNNNCTG 1 cut(s) 428
PsuI RGATCY 2 cut(s) 387, 1065
PvuII CAGCTG 1 cut(s) 13
RseI CAYNNNNRTG 4 cut(s) 77, 521, 773, 911
SapI GCTCTTC 1 cut(s) 911
SaqAI TTAA 7 cut(s) 447, 501, 528, 660, 954, 1026, 1071
SatI GCNGC 3 cut(s) 11, 175, 178
Sau3AI GATC 2 cut(s) 387, 1065
Sau96I GGNCC 7 cut(s) 4, 128, 211, 311, 359, 405, 454
SchI GAGTC 1 cut(s) 943
ScrFI CCNGG 5 cut(s) 132, 184, 496, 714, 959
SduI GDGCHC 1 cut(s) 923
SetI ASST 5 cut(s) 15, 144, 414, 500, 606
SfaNI GCATC 2 cut(s) 754, 882
SfcI CTRYAG 2 cut(s) 8, 301
SinI GGWCC 3 cut(s) 128, 211, 454
SmiMI CAYNNNNRTG 4 cut(s) 77, 521, 773, 911
Sse9I AATT 4 cut(s) 187, 670, 829, 1048
SsiI CCGC 5 cut(s) 177, 537, 609, 909, 973
SspMI CTAG 4 cut(s) 230, 395, 482, 903
StyD4I CCNGG 5 cut(s) 130, 182, 494, 712, 957
StyI CCWWGG 2 cut(s) 307, 457
TaaI ACNGT 1 cut(s) 215
TaiI ACGT 1 cut(s) 606
TaqI TCGA 4 cut(s) 93, 108, 675, 720
TasI AATT 4 cut(s) 187, 670, 829, 1048
TauI GCSGC 1 cut(s) 180
TfiI GAWTC 2 cut(s) 287, 625
Tru1I TTAA 7 cut(s) 447, 501, 528, 660, 954, 1026, 1071
Tru9I TTAA 7 cut(s) 447, 501, 528, 660, 954, 1026, 1071
TscAI CASTG 1 cut(s) 69
TseFI GTSAC 2 cut(s) 236, 331
TseI GCWGC 2 cut(s) 10, 174
Tsp45I GTSAC 2 cut(s) 236, 331
TspRI CASTG 1 cut(s) 69
Van91I CCANNNNNTGG 1 cut(s) 854
VpaK11BI GGWCC 3 cut(s) 128, 211, 454
XapI RAATTY 1 cut(s) 187
XbaI TCTAGA 1 cut(s) 481
XceI RCATGY 3 cut(s) 701, 728, 742
XmiI GTMKAC 1 cut(s) 567
XmnI GAANNNNTTC 1 cut(s) 879
XspI CTAG 4 cut(s) 230, 395, 482, 903
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.