Prupe.2G199500_v2.0.a1
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000357
Physical Location & Seq
Reverse (-)
23667374 .. 23670487
3114 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G199500.1

Sequence Viewer

Length: 1089 bp
ATGGCTTCTTCATTGGAGAGGAAAAGCCATCCCAAAATAAATCATGTTGAGCCTGGGGATGAAATTACAAAGGAAGAGGAAGAAGAAAGCTTTTGCTATGCCATGCAGCTGGTGGGTTCTTCTGTGCTGTCCATATCTCTGCAATCAGCAATTGAGCTTGGCGTTTTTGACATCATAGCCAAAGAGGGTCCAGGCGCCAAGCTCTCTTTGTCTGAGATCGCAGCCAAGATTGGCACCAGGAATTCTGAGGCACCCATGATGATGGATAGGATCCTCAGGCTCCTCGCCAGCCACTCTGTTCTCCATTGCTCTCTTGTTGCTGCTAATGAGGATGAAAATGGTGGGTCTGATTTTCAAAGGGTCTATAGCCTTGGCCCTGTATCTAAGTACTTTGTGAATGATGTAGAAGGTGGTTCTTTGGGCCCCTTGATGGCATTGGATCAAGACAAGTTTGTGCTAATTATAATACTAATTGGGTCTCAACTGAAAGATGCAGTTGTTGAAGGAGGAATTCCATTTAACAGGGTCCATGGCATGCAAACTTTTGAGTTTCTAGGTTTGGACCCCAGGTTTAATCAAGTGTTCAACACAGCAATGTTTAACCACACCACCATTGTCATCAAGAAACTTCTTCACATCTACAAGGGTTTTCAAGACAAGAACCTCACACAACTTATTGATGTTGGTGGTGGCTTTGGAGTGACCCTTAATCTGGTCACATCTAGATATCCCCATATAAGGGGTATCTACTACGACTTGCCCCATGTCGTAAATCATCCCCTTCCTATCCTGGTGTGGAACATGTTTGCTAGTGTTCCAATTCCAAGTGGGGATGCCATTTTTTTGAAGTGGATACTTCATAATCGGAGCGATGAGCACTGCCTAAAGCTGTTGAAGAATTGTTGCAAAGCTATTCCAGACAATGGAAAAGTGATTGTTGTGGAAGAACTACTTCCAGCTATGCCAGATACTAGGGATACTAGCACTGCTGTGAAAAGCACTTCCCAACTTGATGTGATTATGATGACTCAAATTCCGGGAGCGAAGGAGAGGAGAACAAGAAATCATGGCCCTGGCAACTGGTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko01058 ko01100 ko01110 map00940 map01058 map01100 map01110
Pfam Domains
Protein Families
Dimerisation Methyltransf_2

Protein Analysis

363

Amino Acids

39.99

Weight (kDa)

6.11

Isoelectric Point (pI)

32.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000357)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g17810 FvH4_7g17811 FvH4_7g17820 FvH4_7g17830
malus_domestica MD00G1100700.v1.1 MD01G1089600.v1.1 MD01G1089800.v1.1 MD01G1090400.v1.1 MD01G1090500.v1.1 MD01G1090800.v1.1 MD04G1141100.v1.1 MD07G1161000.v1.1 MD07G1161100.v1.1 MD10G1030000.v1.1 MD10G1030200.v1.1 MD15G1409200.v1.1 MD15G1409700.v1.1
prunus_persica Prupe.2G199100_v2.0.a1 Prupe.2G199100_v2.0.a1 Prupe.2G199300_v2.0.a1 Prupe.2G199400_v2.0.a1 Prupe.2G199400_v2.0.a1 Prupe.2G199500_v2.0.a1 Prupe.2G199600_v2.0.a1 Prupe.2G199600_v2.0.a1 Prupe.2G199800_v2.0.a1 Prupe.2G200100_v2.0.a1 Prupe.2G200100_v2.0.a1
pyrus_communis pycom01g11360 pycom01g11370 pycom01g11400 pycom01g11440 pycom01g11480 pycom01g11490 pycom07g15690 pycom08g12100
rosa_chinensis RchiOBHm_Chr1g0317931 RchiOBHm_Chr1g0361211 RchiOBHm_Chr1g0361221 RchiOBHm_Chr1g0361241 RchiOBHm_Chr1g0367691 RchiOBHm_Chr4g0390171 RchiOBHm_Chr4g0396271 RchiOBHm_Chr6g0286421
rosa_laevigata RLG00000002555 RLG00000009555 RLG00000027275 RLG00000027731 RLG00000027732 RLG00000027734 RLG00000027738 RLG00000030575
rosa_multiflora Rmu_co8470451.1_g000001 Rmu_sc0000250.1_g000010 Rmu_sc0010379.1_g000006 Rmu_sc0011132.1_g000005 Rmu_sc0011132.1_g000007 Rmu_sc0038028.1_g000001 Rmu_ssc0000008.1_g000043 Rmu_ssc0000234.1_g000002 Rmu_ssc0000418.1_g000001
rosa_roxburghii Rroxscaffold_2G00116370 Rroxscaffold_4G00289300 Rroxscaffold_4G00295130 Rroxscaffold_4G00295140 Rroxscaffold_4G00295160 Rroxscaffold_4G00295190 Rroxscaffold_4G00295220 Rroxscaffold_4G00330100 Rroxscaffold_5G00341100
rosa_rugosa Rorug01G0287600 Rorug01G0287700 Rorug01G0336200 Rorug01G0336200 Rorug03G0350700
rosa_samantha Rh1AG030300 Rh1AG298500 Rh1AG298600 Rh1AG298700 Rh1AG298900 Rh1BG262400 Rh1BG262500 Rh1BG262800 Rh1BG304800 Rh1CG029000 Rh1CG279800 Rh1CG279900 Rh1CG280000 Rh1CG280100 Rh1CG280200 Rh1CG320500 Rh1DG041200 Rh1DG292700 Rh1DG292800 Rh1DG337100 Rh3DG107500 Rh4AG128100 Rh4BG024900 Rh4CG072700 Rh4DG063000 Rh6CG295900 Rh6DG287700
rosa_wichuraiana Rw1G002290 Rw1G026410 Rw1G026420 Rw1G026440 Rw4G005440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 464
AccB1I GGYRCC 3 cut(s) 194, 233, 250
AccB7I CCANNNNNTGG 1 cut(s) 923
AclWI GGATC 3 cut(s) 265, 278, 447
AcsI RAATTY 3 cut(s) 241, 510, 1032
AcyI GRCGYC 1 cut(s) 195
AfaI GTAC 1 cut(s) 389
AfiI CCNNNNNNNGG 5 cut(s) 430, 712, 738, 739, 923
AflIII ACRYGT 1 cut(s) 801
AgsI TTSAA 6 cut(s) 356, 503, 586, 653, 847, 895
AjnI CCWGG 6 cut(s) 52, 190, 236, 566, 789, 1072
AleI CACNNNNGTG 1 cut(s) 989
AluBI AGCT 7 cut(s) 90, 109, 157, 202, 889, 911, 959
AluI AGCT 7 cut(s) 90, 109, 157, 202, 889, 911, 959
Alw21I GWGCWC 1 cut(s) 879
Alw26I GTCTC 1 cut(s) 483
AlwI GGATC 3 cut(s) 265, 278, 447
AoxI GGCC 3 cut(s) 373, 421, 1069
ApaI GGGCCC 1 cut(s) 425
ApeKI GCWGC 3 cut(s) 106, 221, 320
ApoI RAATTY 3 cut(s) 241, 510, 1032
Asp700I GAANNNNTTC 1 cut(s) 951
AspLEI GCGC 1 cut(s) 197
AspS9I GGNCC 7 cut(s) 188, 374, 421, 422, 526, 562, 1070
AsuC2I CCSGG 1 cut(s) 1038
AvaII GGWCC 3 cut(s) 188, 526, 562
AxyI CCTNAGG 1 cut(s) 275
BaeGI GKGCMC 1 cut(s) 425
BamHI GGATCC 1 cut(s) 270
BanI GGYRCC 3 cut(s) 194, 233, 250
BanII GRGCYC 1 cut(s) 425
Bbv12I GWGCWC 1 cut(s) 879
BbvI GCAGC 3 cut(s) 118, 233, 307
BccI CCATC 3 cut(s) 36, 256, 424
BciT130I CCWGG 6 cut(s) 54, 192, 238, 568, 791, 1074
BciVI GTATCC 2 cut(s) 846, 970
BcnI CCSGG 1 cut(s) 1038
BcoDI GTCTC 1 cut(s) 483
BfaI CTAG 5 cut(s) 554, 723, 810, 972, 981
BfmI CTRYAG 1 cut(s) 364
BfoI RGCGCY 1 cut(s) 198
BfuI GTATCC 2 cut(s) 846, 970
BisI GCNGC 3 cut(s) 107, 222, 321
BlsI GCNGC 3 cut(s) 108, 223, 322
BmcAI AGTACT 1 cut(s) 389
Bme1390I CCNGG 7 cut(s) 54, 192, 238, 568, 791, 1038, 1074
Bme18I GGWCC 3 cut(s) 188, 526, 562
BmgT120I GGNCC 7 cut(s) 188, 374, 421, 422, 526, 562, 1070
BmrFI CCNGG 7 cut(s) 54, 192, 238, 568, 791, 1038, 1074
BmsI GCATC 2 cut(s) 481, 823
BpuMI CCSGG 1 cut(s) 1038
BsaHI GRCGYC 1 cut(s) 195
BsaI GGTCTC 1 cut(s) 483
BsaJI CCNNGG 5 cut(s) 53, 370, 529, 566, 1072
Bsc4I CCNNNNNNNGG 5 cut(s) 430, 712, 738, 739, 923
Bse1I ACTGG 1 cut(s) 1085
Bse21I CCTNAGG 1 cut(s) 275
Bse3DI GCAATG 2 cut(s) 304, 600
BseBI CCWGG 6 cut(s) 54, 192, 238, 568, 791, 1074
BseDI CCNNGG 5 cut(s) 53, 370, 529, 566, 1072
BseGI GGATG 5 cut(s) 28, 64, 337, 775, 838
BseLI CCNNNNNNNGG 5 cut(s) 430, 712, 738, 739, 923
BseMI GCAATG 2 cut(s) 304, 600
BseMII CTCAG 3 cut(s) 204, 237, 289
BseNI ACTGG 1 cut(s) 1085
BseRI GAGGAG 2 cut(s) 272, 1066
BseSI GKGCMC 1 cut(s) 425
BseXI GCAGC 3 cut(s) 118, 233, 307
BshFI GGCC 3 cut(s) 375, 423, 1071
BshNI GGYRCC 3 cut(s) 194, 233, 250
BsiHKAI GWGCWC 1 cut(s) 879
BsiSI CCGG 1 cut(s) 1037
BslI CCNNNNNNNGG 5 cut(s) 430, 712, 738, 739, 923
BsmAI GTCTC 1 cut(s) 483
BsnI GGCC 3 cut(s) 375, 423, 1071
Bso31I GGTCTC 1 cut(s) 483
Bsp120I GGGCCC 1 cut(s) 421
Bsp1286I GDGCHC 2 cut(s) 425, 879
Bsp143I GATC 3 cut(s) 216, 270, 439
Bsp19I CCATGG 1 cut(s) 529
BspANI GGCC 3 cut(s) 375, 423, 1071
BspCNI CTCAG 3 cut(s) 205, 238, 288
BspPI GGATC 3 cut(s) 265, 278, 447
BspT107I GGYRCC 3 cut(s) 194, 233, 250
BspTNI GGTCTC 1 cut(s) 483
BsrDI GCAATG 2 cut(s) 304, 600
BsrI ACTGG 1 cut(s) 1085
BssECI CCNNGG 5 cut(s) 53, 370, 529, 566, 1072
BssMI GATC 3 cut(s) 216, 270, 439
BssNI GRCGYC 1 cut(s) 195
BssT1I CCWWGG 2 cut(s) 370, 529
Bst2UI CCWGG 6 cut(s) 54, 192, 238, 568, 791, 1074
Bst6I CTCTTC 1 cut(s) 69
BstACI GRCGYC 1 cut(s) 195
BstAPI GCANNNNNTGC 1 cut(s) 1083
BstC8I GCNNGC 2 cut(s) 289, 536
BstDEI CTNAG 4 cut(s) 213, 246, 275, 384
BstDSI CCRYGG 1 cut(s) 529
BstF5I GGATG 5 cut(s) 28, 64, 337, 775, 838
BstH2I RGCGCY 1 cut(s) 198
BstHHI GCGC 1 cut(s) 197
BstKTI GATC 3 cut(s) 219, 273, 442
BstMAI GTCTC 1 cut(s) 483
BstMBI GATC 3 cut(s) 216, 270, 439
BstMWI GCNNNNNNNGC 1 cut(s) 1083
BstNI CCWGG 6 cut(s) 54, 192, 238, 568, 791, 1074
BstNSI RCATGY 2 cut(s) 538, 805
BstSCI CCNGG 7 cut(s) 52, 190, 236, 566, 789, 1036, 1072
BstSFI CTRYAG 1 cut(s) 364
BstSLI GKGCMC 1 cut(s) 425
BstV1I GCAGC 3 cut(s) 118, 233, 307
BstX2I RGATCY 1 cut(s) 270
BstXI CCANNNNNNTGG 2 cut(s) 109, 262
BstYI RGATCY 1 cut(s) 270
Bsu36I CCTNAGG 1 cut(s) 275
BsuI GTATCC 2 cut(s) 846, 970
BsuRI GGCC 3 cut(s) 375, 423, 1071
BtgI CCRYGG 1 cut(s) 529
BtgZI GCGATG 1 cut(s) 885
BtsCI GGATG 5 cut(s) 28, 64, 337, 775, 838
BtsI GCAGTG 2 cut(s) 877, 984
BtsIMutI CAGTG 2 cut(s) 877, 984
Cac8I GCNNGC 2 cut(s) 289, 536
CfoI GCGC 1 cut(s) 197
Cfr13I GGNCC 7 cut(s) 188, 374, 421, 422, 526, 562, 1070
Csp6I GTAC 1 cut(s) 388
CviAII CATG 8 cut(s) 44, 103, 256, 530, 535, 764, 802, 1067
CviQI GTAC 1 cut(s) 388
DdeI CTNAG 4 cut(s) 213, 246, 275, 384
DinI GGCGCC 1 cut(s) 196
DpnI GATC 3 cut(s) 218, 272, 441
DpnII GATC 3 cut(s) 216, 270, 439
Eam1104I CTCTTC 1 cut(s) 69
EarI CTCTTC 1 cut(s) 69
Eco130I CCWWGG 2 cut(s) 370, 529
Eco24I GRGCYC 1 cut(s) 425
Eco31I GGTCTC 1 cut(s) 483
Eco32I GATATC 1 cut(s) 728
Eco47I GGWCC 3 cut(s) 188, 526, 562
Eco81I CCTNAGG 1 cut(s) 275
EcoO109I RGGNCCY 1 cut(s) 422
EcoRI GAATTC 2 cut(s) 241, 510
EcoRII CCWGG 6 cut(s) 52, 190, 236, 566, 789, 1072
EcoRV GATATC 1 cut(s) 728
EcoT14I CCWWGG 2 cut(s) 370, 529
EcoT38I GRGCYC 1 cut(s) 425
EgeI GGCGCC 1 cut(s) 196
EheI GGCGCC 1 cut(s) 196
ErhI CCWWGG 2 cut(s) 370, 529
FaeI CATG 8 cut(s) 47, 106, 259, 533, 538, 767, 805, 1070
FalI AAGNNNNNCTT 2 cut(s) 936, 968
FatI CATG 8 cut(s) 43, 102, 255, 529, 534, 763, 801, 1066
Fnu4HI GCNGC 3 cut(s) 107, 222, 321
FokI GGATG 5 cut(s) 15, 71, 344, 762, 845
FriOI GRGCYC 1 cut(s) 425
Fsp4HI GCNGC 3 cut(s) 107, 222, 321
FspBI CTAG 5 cut(s) 554, 723, 810, 972, 981
GlaI GCGC 1 cut(s) 196
GluI GCNGC 3 cut(s) 107, 222, 321
HaeII RGCGCY 1 cut(s) 198
HaeIII GGCC 3 cut(s) 375, 423, 1071
HapII CCGG 1 cut(s) 1037
HhaI GCGC 1 cut(s) 197
Hin1I GRCGYC 1 cut(s) 195
Hin1II CATG 8 cut(s) 47, 106, 259, 533, 538, 767, 805, 1070
Hin6I GCGC 1 cut(s) 195
HinP1I GCGC 1 cut(s) 195
HindIII AAGCTT 1 cut(s) 88
HinfI GANTC 1 cut(s) 1027
HpaII CCGG 1 cut(s) 1037
Hpy188I TCNGA 4 cut(s) 214, 247, 349, 867
Hpy188III TCNNGA 5 cut(s) 443, 622, 653, 723, 917
HpyAV CCTTC 4 cut(s) 401, 497, 791, 1039
HpyCH4V TGCA 5 cut(s) 106, 142, 494, 538, 906
HpyF10VI GCNNNNNNNGC 1 cut(s) 1083
HpyF3I CTNAG 4 cut(s) 213, 246, 275, 384
Hsp92I GRCGYC 1 cut(s) 195
Hsp92II CATG 8 cut(s) 47, 106, 259, 533, 538, 767, 805, 1070
HspAI GCGC 1 cut(s) 195
KasI GGCGCC 1 cut(s) 194
Kzo9I GATC 3 cut(s) 216, 270, 439
LmnI GCTCC 3 cut(s) 285, 867, 1040
Lsp1109I GCAGC 3 cut(s) 118, 233, 307
LweI GCATC 2 cut(s) 481, 823
MaeI CTAG 5 cut(s) 554, 723, 810, 972, 981
MaeIII GTNAC 2 cut(s) 700, 715
MalI GATC 3 cut(s) 218, 272, 441
MboI GATC 3 cut(s) 216, 270, 439
MboII GAAGA 7 cut(s) 86, 92, 95, 111, 623, 907, 956
MfeI CAATTG 1 cut(s) 150
MflI RGATCY 1 cut(s) 270
MhlI GDGCHC 2 cut(s) 425, 879
MluCI AATT 9 cut(s) 63, 150, 241, 459, 471, 510, 819, 898, 1032
Mly113I GGCGCC 1 cut(s) 195
MlyI GAGTC 1 cut(s) 1021
MroXI GAANNNNTTC 1 cut(s) 951
MseI TTAA 4 cut(s) 519, 573, 600, 708
MslI CAYNNNNRTG 3 cut(s) 260, 593, 989
MspA1I CMGCKG 1 cut(s) 109
MspI CCGG 1 cut(s) 1037
MspR9I CCNGG 7 cut(s) 54, 192, 238, 568, 791, 1038, 1074
MunI CAATTG 1 cut(s) 150
MvaI CCWGG 6 cut(s) 54, 192, 238, 568, 791, 1074
MwoI GCNNNNNNNGC 1 cut(s) 1083
NarI GGCGCC 1 cut(s) 195
NciI CCSGG 1 cut(s) 1038
NcoI CCATGG 1 cut(s) 529
NdeII GATC 3 cut(s) 216, 270, 439
NlaIII CATG 8 cut(s) 47, 106, 259, 533, 538, 767, 805, 1070
NmuCI GTSAC 2 cut(s) 700, 715
NspI RCATGY 2 cut(s) 538, 805
OliI CACNNNNGTG 1 cut(s) 989
PaeI GCATGC 1 cut(s) 538
PciI ACATGT 1 cut(s) 801
PdmI GAANNNNTTC 1 cut(s) 951
PflMI CCANNNNNTGG 1 cut(s) 923
PfoI TCCNGGA 1 cut(s) 1036
PkrI GCNGC 3 cut(s) 108, 223, 322
PleI GAGTC 1 cut(s) 1021
PluTI GGCGCC 1 cut(s) 198
PpsI GAGTC 1 cut(s) 1021
PscI ACATGT 1 cut(s) 801
PsiI TTATAA 1 cut(s) 464
Psp6I CCWGG 6 cut(s) 52, 190, 236, 566, 789, 1072
PspGI CCWGG 6 cut(s) 52, 190, 236, 566, 789, 1072
PspOMI GGGCCC 1 cut(s) 421
PspPI GGNCC 7 cut(s) 188, 374, 421, 422, 526, 562, 1070
PsuI RGATCY 1 cut(s) 270
PvuII CAGCTG 1 cut(s) 109
RsaI GTAC 1 cut(s) 389
RsaNI GTAC 1 cut(s) 388
RseI CAYNNNNRTG 3 cut(s) 260, 593, 989
SaqAI TTAA 4 cut(s) 519, 573, 600, 708
SatI GCNGC 3 cut(s) 107, 222, 321
Sau3AI GATC 3 cut(s) 216, 270, 439
Sau96I GGNCC 7 cut(s) 188, 374, 421, 422, 526, 562, 1070
ScaI AGTACT 1 cut(s) 389
SchI GAGTC 1 cut(s) 1021
ScrFI CCNGG 7 cut(s) 54, 192, 238, 568, 791, 1038, 1074
SduI GDGCHC 2 cut(s) 425, 879
SfaNI GCATC 2 cut(s) 481, 823
SfcI CTRYAG 1 cut(s) 364
SfoI GGCGCC 1 cut(s) 196
SinI GGWCC 3 cut(s) 188, 526, 562
SmiMI CAYNNNNRTG 3 cut(s) 260, 593, 989
SphI GCATGC 1 cut(s) 538
Sse9I AATT 9 cut(s) 63, 150, 241, 459, 471, 510, 819, 898, 1032
SspDI GGCGCC 1 cut(s) 194
SspMI CTAG 5 cut(s) 554, 723, 810, 972, 981
StyD4I CCNGG 7 cut(s) 52, 190, 236, 566, 789, 1036, 1072
StyI CCWWGG 2 cut(s) 370, 529
TasI AATT 9 cut(s) 63, 150, 241, 459, 471, 510, 819, 898, 1032
TatI WGTACW 1 cut(s) 387
Tru1I TTAA 4 cut(s) 519, 573, 600, 708
Tru9I TTAA 4 cut(s) 519, 573, 600, 708
TscAI CASTG 2 cut(s) 884, 991
TseFI GTSAC 2 cut(s) 700, 715
TseI GCWGC 3 cut(s) 106, 221, 320
Tsp45I GTSAC 2 cut(s) 700, 715
TspDTI ATGAA 3 cut(s) 75, 348, 848
TspRI CASTG 2 cut(s) 884, 991
Van91I CCANNNNNTGG 1 cut(s) 923
VpaK11BI GGWCC 3 cut(s) 188, 526, 562
XapI RAATTY 3 cut(s) 241, 510, 1032
XbaI TCTAGA 1 cut(s) 722
XceI RCATGY 2 cut(s) 538, 805
XcmI CCANNNNNNNNNTGG 1 cut(s) 109
XmnI GAANNNNTTC 1 cut(s) 951
XspI CTAG 5 cut(s) 554, 723, 810, 972, 981
ZrmI AGTACT 1 cut(s) 389
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.