Protein ROOT HAIR DEFECTIVE 3 homolog
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 170 |
| AccII | CGCG | 1 cut(s) | 20 |
| AciI | CCGC | 4 cut(s) | 18, 20, 168, 270 |
| AclWI | GGATC | 1 cut(s) | 168 |
| AcoI | YGGCCR | 1 cut(s) | 21 |
| AcsI | RAATTY | 1 cut(s) | 221 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 101 |
| AgsI | TTSAA | 1 cut(s) | 226 |
| AjnI | CCWGG | 3 cut(s) | 58, 237, 311 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 140, 172, 206, 238 |
| Alw21I | GWGCWC | 1 cut(s) | 121 |
| Alw26I | GTCTC | 1 cut(s) | 338 |
| Alw44I | GTGCAC | 1 cut(s) | 117 |
| AlwI | GGATC | 1 cut(s) | 168 |
| AoxI | GGCC | 2 cut(s) | 3, 21 |
| ApaLI | GTGCAC | 1 cut(s) | 117 |
| ApeKI | GCWGC | 1 cut(s) | 9 |
| ApoI | RAATTY | 1 cut(s) | 221 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 219, 251 |
| AspS9I | GGNCC | 2 cut(s) | 235, 272 |
| AvaII | GGWCC | 2 cut(s) | 235, 272 |
| BaeGI | GKGCMC | 1 cut(s) | 121 |
| Bbv12I | GWGCWC | 1 cut(s) | 121 |
| BbvI | GCAGC | 1 cut(s) | 21 |
| BccI | CCATC | 1 cut(s) | 29 |
| BciT130I | CCWGG | 3 cut(s) | 60, 239, 313 |
| BcoDI | GTCTC | 1 cut(s) | 338 |
| BfmI | CTRYAG | 2 cut(s) | 7, 276 |
| BisI | GCNGC | 3 cut(s) | 10, 18, 21 |
| BlsI | GCNGC | 3 cut(s) | 11, 19, 22 |
| Bme1390I | CCNGG | 3 cut(s) | 60, 239, 313 |
| Bme18I | GGWCC | 2 cut(s) | 235, 272 |
| BmgT120I | GGNCC | 2 cut(s) | 235, 272 |
| BmrFI | CCNGG | 3 cut(s) | 60, 239, 313 |
| BpmI | CTGGAG | 1 cut(s) | 42 |
| BsaI | GGTCTC | 1 cut(s) | 338 |
| BsaJI | CCNNGG | 2 cut(s) | 18, 312 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 101 |
| Bse1I | ACTGG | 2 cut(s) | 294, 301 |
| BseBI | CCWGG | 3 cut(s) | 60, 239, 313 |
| BseDI | CCNNGG | 2 cut(s) | 18, 312 |
| BseGI | GGATG | 1 cut(s) | 247 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 101 |
| BseNI | ACTGG | 2 cut(s) | 294, 301 |
| BseSI | GKGCMC | 1 cut(s) | 121 |
| BseX3I | CGGCCG | 1 cut(s) | 21 |
| BseXI | GCAGC | 1 cut(s) | 21 |
| Bsh1236I | CGCG | 1 cut(s) | 20 |
| Bsh1285I | CGRYCG | 1 cut(s) | 24 |
| BshFI | GGCC | 2 cut(s) | 5, 23 |
| BsiEI | CGRYCG | 1 cut(s) | 24 |
| BsiHKAI | GWGCWC | 1 cut(s) | 121 |
| BslFI | GGGAC | 1 cut(s) | 77 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 101 |
| BsmAI | GTCTC | 1 cut(s) | 338 |
| BsmFI | GGGAC | 1 cut(s) | 77 |
| BsnI | GGCC | 2 cut(s) | 5, 23 |
| Bso31I | GGTCTC | 1 cut(s) | 338 |
| Bsp1286I | GDGCHC | 1 cut(s) | 121 |
| Bsp143I | GATC | 1 cut(s) | 160 |
| BspACI | CCGC | 4 cut(s) | 18, 20, 168, 270 |
| BspANI | GGCC | 2 cut(s) | 5, 23 |
| BspFNI | CGCG | 1 cut(s) | 20 |
| BspMAI | CTGCAG | 1 cut(s) | 11 |
| BspPI | GGATC | 1 cut(s) | 168 |
| BspTNI | GGTCTC | 1 cut(s) | 338 |
| BsrBI | CCGCTC | 1 cut(s) | 170 |
| BsrI | ACTGG | 2 cut(s) | 294, 301 |
| BssECI | CCNNGG | 2 cut(s) | 18, 312 |
| BssMI | GATC | 1 cut(s) | 160 |
| Bst2UI | CCWGG | 3 cut(s) | 60, 239, 313 |
| Bst4CI | ACNGT | 3 cut(s) | 193, 231, 402 |
| Bst6I | CTCTTC | 1 cut(s) | 198 |
| BstC8I | GCNNGC | 3 cut(s) | 7, 69, 73 |
| BstDSI | CCRYGG | 1 cut(s) | 18 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 99 |
| BstF5I | GGATG | 1 cut(s) | 247 |
| BstFNI | CGCG | 1 cut(s) | 20 |
| BstKTI | GATC | 1 cut(s) | 163 |
| BstMAI | GTCTC | 1 cut(s) | 338 |
| BstMBI | GATC | 1 cut(s) | 160 |
| BstMCI | CGRYCG | 1 cut(s) | 24 |
| BstNI | CCWGG | 3 cut(s) | 60, 239, 313 |
| BstSCI | CCNGG | 3 cut(s) | 58, 237, 311 |
| BstSFI | CTRYAG | 2 cut(s) | 7, 276 |
| BstSLI | GKGCMC | 1 cut(s) | 121 |
| BstUI | CGCG | 1 cut(s) | 20 |
| BstV1I | GCAGC | 1 cut(s) | 21 |
| BstX2I | RGATCY | 1 cut(s) | 160 |
| BstYI | RGATCY | 1 cut(s) | 160 |
| BstZI | CGGCCG | 1 cut(s) | 21 |
| BsuRI | GGCC | 2 cut(s) | 5, 23 |
| BtgI | CCRYGG | 1 cut(s) | 18 |
| BtsCI | GGATG | 1 cut(s) | 247 |
| Cac8I | GCNNGC | 3 cut(s) | 7, 69, 73 |
| Cfr13I | GGNCC | 2 cut(s) | 235, 272 |
| Cfr42I | CCGCGG | 1 cut(s) | 21 |
| CseI | GACGC | 1 cut(s) | 87 |
| CviJI | RGCY | 7 cut(s) | 5, 23, 39, 67, 86, 284, 317 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 23, 39, 67, 86, 284, 317 |
| DpnI | GATC | 1 cut(s) | 162 |
| DpnII | GATC | 1 cut(s) | 160 |
| EaeI | YGGCCR | 1 cut(s) | 21 |
| EagI | CGGCCG | 1 cut(s) | 21 |
| Eam1104I | CTCTTC | 1 cut(s) | 198 |
| EarI | CTCTTC | 1 cut(s) | 198 |
| EclXI | CGGCCG | 1 cut(s) | 21 |
| Eco31I | GGTCTC | 1 cut(s) | 338 |
| Eco47I | GGWCC | 2 cut(s) | 235, 272 |
| Eco52I | CGGCCG | 1 cut(s) | 21 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 99 |
| EcoRII | CCWGG | 3 cut(s) | 58, 237, 311 |
| FaiI | YATR | 1 cut(s) | 182 |
| FaqI | GGGAC | 1 cut(s) | 77 |
| FauI | CCCGC | 1 cut(s) | 175 |
| Fnu4HI | GCNGC | 3 cut(s) | 10, 18, 21 |
| FokI | GGATG | 1 cut(s) | 254 |
| Fsp4HI | GCNGC | 3 cut(s) | 10, 18, 21 |
| GluI | GCNGC | 3 cut(s) | 10, 18, 21 |
| GsuI | CTGGAG | 1 cut(s) | 42 |
| HaeIII | GGCC | 2 cut(s) | 5, 23 |
| HgaI | GACGC | 1 cut(s) | 87 |
| Hpy166II | GTNNAC | 1 cut(s) | 119 |
| Hpy188I | TCNGA | 1 cut(s) | 364 |
| Hpy188III | TCNNGA | 2 cut(s) | 102, 341 |
| Hpy8I | GTNNAC | 1 cut(s) | 119 |
| HpyAV | CCTTC | 1 cut(s) | 75 |
| HpyCH4III | ACNGT | 3 cut(s) | 193, 231, 402 |
| HpyCH4V | TGCA | 5 cut(s) | 9, 119, 302, 356, 377 |
| KspI | CCGCGG | 1 cut(s) | 21 |
| Kzo9I | GATC | 1 cut(s) | 160 |
| Lsp1109I | GCAGC | 1 cut(s) | 21 |
| MalI | GATC | 1 cut(s) | 162 |
| MbiI | CCGCTC | 1 cut(s) | 170 |
| MboI | GATC | 1 cut(s) | 160 |
| MboII | GAAGA | 3 cut(s) | 155, 215, 249 |
| MflI | RGATCY | 1 cut(s) | 160 |
| MhlI | GDGCHC | 1 cut(s) | 121 |
| MluCI | AATT | 1 cut(s) | 221 |
| MmeI | TCCRAC | 1 cut(s) | 368 |
| MnlI | CCTC | 2 cut(s) | 56, 274 |
| MseI | TTAA | 2 cut(s) | 266, 336 |
| MspA1I | CMGCKG | 1 cut(s) | 20 |
| MspR9I | CCNGG | 3 cut(s) | 60, 239, 313 |
| MvaI | CCWGG | 3 cut(s) | 60, 239, 313 |
| MvnI | CGCG | 1 cut(s) | 20 |
| NdeII | GATC | 1 cut(s) | 160 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 21 |
| PfoI | TCCNGGA | 2 cut(s) | 58, 237 |
| PkrI | GCNGC | 3 cut(s) | 11, 19, 22 |
| Psp6I | CCWGG | 3 cut(s) | 58, 237, 311 |
| PspGI | CCWGG | 3 cut(s) | 58, 237, 311 |
| PspPI | GGNCC | 2 cut(s) | 235, 272 |
| PstI | CTGCAG | 1 cut(s) | 11 |
| PsuI | RGATCY | 1 cut(s) | 160 |
| SacII | CCGCGG | 1 cut(s) | 21 |
| SaqAI | TTAA | 2 cut(s) | 266, 336 |
| SatI | GCNGC | 3 cut(s) | 10, 18, 21 |
| Sau3AI | GATC | 1 cut(s) | 160 |
| Sau96I | GGNCC | 2 cut(s) | 235, 272 |
| ScrFI | CCNGG | 3 cut(s) | 60, 239, 313 |
| SduI | GDGCHC | 1 cut(s) | 121 |
| SetI | ASST | 2 cut(s) | 180, 314 |
| SfcI | CTRYAG | 2 cut(s) | 7, 276 |
| Sfr303I | CCGCGG | 1 cut(s) | 21 |
| SgrBI | CCGCGG | 1 cut(s) | 21 |
| SinI | GGWCC | 2 cut(s) | 235, 272 |
| Sse9I | AATT | 1 cut(s) | 221 |
| SsiI | CCGC | 4 cut(s) | 18, 20, 168, 270 |
| StyD4I | CCNGG | 3 cut(s) | 58, 237, 311 |
| TaaI | ACNGT | 3 cut(s) | 193, 231, 402 |
| TaqI | TCGA | 1 cut(s) | 320 |
| TasI | AATT | 1 cut(s) | 221 |
| TauI | GCSGC | 2 cut(s) | 20, 23 |
| Tru1I | TTAA | 2 cut(s) | 266, 336 |
| Tru9I | TTAA | 2 cut(s) | 266, 336 |
| TseI | GCWGC | 1 cut(s) | 9 |
| TspDTI | ATGAA | 1 cut(s) | 410 |
| VneI | GTGCAC | 1 cut(s) | 117 |
| VpaK11BI | GGWCC | 2 cut(s) | 235, 272 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 99 |
| XapI | RAATTY | 1 cut(s) | 221 |