Protein ROOT HAIR DEFECTIVE 3 homolog
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1129 |
| AccB1I | GGYRCC | 3 cut(s) | 191, 228, 402 |
| AciI | CCGC | 3 cut(s) | 114, 159, 879 |
| AcoI | YGGCCR | 1 cut(s) | 288 |
| AcsI | RAATTY | 5 cut(s) | 639, 794, 911, 1167, 1300 |
| AfaI | GTAC | 5 cut(s) | 283, 307, 387, 625, 1049 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 750, 885 |
| AgsI | TTSAA | 6 cut(s) | 64, 548, 718, 965, 1108, 1166 |
| AjnI | CCWGG | 2 cut(s) | 265, 846 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 896, 928 |
| AluBI | AGCT | 7 cut(s) | 103, 257, 631, 922, 927, 997, 1002 |
| AluI | AGCT | 7 cut(s) | 103, 257, 631, 922, 927, 997, 1002 |
| Alw21I | GWGCWC | 1 cut(s) | 170 |
| Alw26I | GTCTC | 4 cut(s) | 340, 606, 1034, 1135 |
| AoxI | GGCC | 2 cut(s) | 117, 288 |
| ApeKI | GCWGC | 4 cut(s) | 27, 428, 919, 1292 |
| ApoI | RAATTY | 5 cut(s) | 639, 794, 911, 1167, 1300 |
| AseI | ATTAAT | 1 cut(s) | 509 |
| AspLEI | GCGC | 2 cut(s) | 149, 358 |
| AspS9I | GGNCC | 3 cut(s) | 117, 844, 1118 |
| AsuC2I | CCSGG | 1 cut(s) | 747 |
| AsuHPI | GGTGA | 5 cut(s) | 68, 119, 124, 776, 1105 |
| AvaII | GGWCC | 2 cut(s) | 844, 1118 |
| BalI | TGGCCA | 1 cut(s) | 290 |
| BanI | GGYRCC | 3 cut(s) | 191, 228, 402 |
| Bbv12I | GWGCWC | 1 cut(s) | 170 |
| BbvI | GCAGC | 4 cut(s) | 14, 415, 931, 1279 |
| BccI | CCATC | 3 cut(s) | 146, 202, 305 |
| BceAI | ACGGC | 1 cut(s) | 1094 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1263, 1297 |
| BciT130I | CCWGG | 2 cut(s) | 267, 848 |
| BcnI | CCSGG | 1 cut(s) | 747 |
| BcoDI | GTCTC | 4 cut(s) | 340, 606, 1034, 1135 |
| BfaI | CTAG | 1 cut(s) | 950 |
| BfmI | CTRYAG | 1 cut(s) | 648 |
| BfoI | RGCGCY | 1 cut(s) | 150 |
| BfuAI | ACCTGC | 1 cut(s) | 1129 |
| BisI | GCNGC | 4 cut(s) | 28, 429, 920, 1293 |
| BlpI | GCTNAGC | 2 cut(s) | 923, 998 |
| BlsI | GCNGC | 4 cut(s) | 29, 430, 921, 1294 |
| BmcAI | AGTACT | 1 cut(s) | 1049 |
| Bme1390I | CCNGG | 3 cut(s) | 267, 747, 848 |
| Bme18I | GGWCC | 2 cut(s) | 844, 1118 |
| BmgT120I | GGNCC | 3 cut(s) | 117, 844, 1118 |
| BmiI | GGNNCC | 5 cut(s) | 9, 118, 193, 230, 404 |
| BmrFI | CCNGG | 3 cut(s) | 267, 747, 848 |
| BmrI | ACTGGG | 1 cut(s) | 663 |
| BmsI | GCATC | 4 cut(s) | 465, 1090, 1267, 1279 |
| BmuI | ACTGGG | 1 cut(s) | 663 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 923, 998 |
| BpuEI | CTTGAG | 1 cut(s) | 1349 |
| BpuMI | CCSGG | 1 cut(s) | 747 |
| Bsa29I | ATCGAT | 1 cut(s) | 872 |
| BsaI | GGTCTC | 1 cut(s) | 606 |
| BsaJI | CCNNGG | 2 cut(s) | 291, 745 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1031, 1061 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 750, 885 |
| Bse118I | RCCGGY | 1 cut(s) | 758 |
| Bse1I | ACTGG | 2 cut(s) | 669, 1188 |
| BseBI | CCWGG | 2 cut(s) | 267, 848 |
| BseCI | ATCGAT | 1 cut(s) | 872 |
| BseDI | CCNNGG | 2 cut(s) | 291, 745 |
| BseGI | GGATG | 3 cut(s) | 301, 337, 1220 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 750, 885 |
| BseMII | CTCAG | 6 cut(s) | 164, 195, 804, 937, 1012, 1130 |
| BseNI | ACTGG | 2 cut(s) | 669, 1188 |
| BseRI | GAGGAG | 2 cut(s) | 716, 1346 |
| BseXI | GCAGC | 4 cut(s) | 14, 415, 931, 1279 |
| BseYI | CCCAGC | 2 cut(s) | 71, 627 |
| BsgI | GTGCAG | 1 cut(s) | 1293 |
| BshFI | GGCC | 2 cut(s) | 119, 290 |
| BshNI | GGYRCC | 3 cut(s) | 191, 228, 402 |
| BshVI | ATCGAT | 1 cut(s) | 872 |
| BsiHKAI | GWGCWC | 1 cut(s) | 170 |
| BsiSI | CCGG | 2 cut(s) | 747, 759 |
| BslFI | GGGAC | 1 cut(s) | 584 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 750, 885 |
| BsmAI | GTCTC | 4 cut(s) | 340, 606, 1034, 1135 |
| BsmBI | CGTCTC | 1 cut(s) | 340 |
| BsmFI | GGGAC | 1 cut(s) | 584 |
| BsmI | GAATGC | 6 cut(s) | 73, 116, 478, 598, 1103, 1318 |
| BsnI | GGCC | 2 cut(s) | 119, 290 |
| Bso31I | GGTCTC | 1 cut(s) | 606 |
| Bsp1286I | GDGCHC | 1 cut(s) | 170 |
| Bsp1407I | TGTACA | 1 cut(s) | 281 |
| Bsp143I | GATC | 3 cut(s) | 409, 970, 1190 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 923, 998 |
| Bsp19I | CCATGG | 1 cut(s) | 291 |
| BspACI | CCGC | 3 cut(s) | 114, 159, 879 |
| BspANI | GGCC | 2 cut(s) | 119, 290 |
| BspCNI | CTCAG | 6 cut(s) | 163, 196, 803, 936, 1011, 1131 |
| BspDI | ATCGAT | 1 cut(s) | 872 |
| BspLI | GGNNCC | 5 cut(s) | 9, 118, 193, 230, 404 |
| BspMI | ACCTGC | 1 cut(s) | 1129 |
| BspQI | GCTCTTC | 1 cut(s) | 158 |
| BspT107I | GGYRCC | 3 cut(s) | 191, 228, 402 |
| BspTNI | GGTCTC | 1 cut(s) | 606 |
| BsrFI | RCCGGY | 1 cut(s) | 758 |
| BsrGI | TGTACA | 1 cut(s) | 281 |
| BsrI | ACTGG | 2 cut(s) | 669, 1188 |
| BssAI | RCCGGY | 1 cut(s) | 758 |
| BssECI | CCNNGG | 2 cut(s) | 291, 745 |
| BssMI | GATC | 3 cut(s) | 409, 970, 1190 |
| BssT1I | CCWWGG | 1 cut(s) | 291 |
| Bst2UI | CCWGG | 2 cut(s) | 267, 848 |
| Bst4CI | ACNGT | 4 cut(s) | 56, 83, 961, 1089 |
| Bst6I | CTCTTC | 2 cut(s) | 158, 888 |
| BstAUI | TGTACA | 1 cut(s) | 281 |
| BstC8I | GCNNGC | 5 cut(s) | 96, 426, 756, 786, 1250 |
| BstDEI | CTNAG | 7 cut(s) | 150, 204, 446, 790, 923, 998, 1139 |
| BstDSI | CCRYGG | 1 cut(s) | 291 |
| BstEII | GGTNACC | 1 cut(s) | 764 |
| BstF5I | GGATG | 3 cut(s) | 301, 337, 1220 |
| BstH2I | RGCGCY | 1 cut(s) | 150 |
| BstHHI | GCGC | 2 cut(s) | 149, 358 |
| BstKTI | GATC | 3 cut(s) | 412, 973, 1193 |
| BstMAI | GTCTC | 4 cut(s) | 340, 606, 1034, 1135 |
| BstMBI | GATC | 3 cut(s) | 409, 970, 1190 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 100, 165, 362 |
| BstNI | CCWGG | 2 cut(s) | 267, 848 |
| BstNSI | RCATGY | 3 cut(s) | 428, 1252, 1272 |
| BstPI | GGTNACC | 1 cut(s) | 764 |
| BstSCI | CCNGG | 3 cut(s) | 265, 745, 846 |
| BstSFI | CTRYAG | 1 cut(s) | 648 |
| BstV1I | GCAGC | 4 cut(s) | 14, 415, 931, 1279 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 298, 413 |
| Bsu15I | ATCGAT | 1 cut(s) | 872 |
| BsuRI | GGCC | 2 cut(s) | 119, 290 |
| BsuTUI | ATCGAT | 1 cut(s) | 872 |
| BtgI | CCRYGG | 1 cut(s) | 291 |
| BtsCI | GGATG | 3 cut(s) | 301, 337, 1220 |
| BtsIMutI | CAGTG | 1 cut(s) | 201 |
| BveI | ACCTGC | 1 cut(s) | 1129 |
| Cac8I | GCNNGC | 5 cut(s) | 96, 426, 756, 786, 1250 |
| CfoI | GCGC | 2 cut(s) | 149, 358 |
| Cfr10I | RCCGGY | 1 cut(s) | 758 |
| Cfr13I | GGNCC | 3 cut(s) | 117, 844, 1118 |
| ClaI | ATCGAT | 1 cut(s) | 872 |
| Csp6I | GTAC | 5 cut(s) | 282, 306, 386, 624, 1048 |
| CviAII | CATG | 7 cut(s) | 292, 407, 425, 617, 916, 1249, 1269 |
| CviQI | GTAC | 5 cut(s) | 282, 306, 386, 624, 1048 |
| DdeI | CTNAG | 7 cut(s) | 150, 204, 446, 790, 923, 998, 1139 |
| DpnI | GATC | 3 cut(s) | 411, 972, 1192 |
| DpnII | GATC | 3 cut(s) | 409, 970, 1190 |
| DraI | TTTAAA | 1 cut(s) | 1174 |
| EaeI | YGGCCR | 1 cut(s) | 288 |
| Eam1104I | CTCTTC | 2 cut(s) | 158, 888 |
| EarI | CTCTTC | 2 cut(s) | 158, 888 |
| Eco130I | CCWWGG | 1 cut(s) | 291 |
| Eco31I | GGTCTC | 1 cut(s) | 606 |
| Eco47I | GGWCC | 2 cut(s) | 844, 1118 |
| Eco91I | GGTNACC | 1 cut(s) | 764 |
| EcoO109I | RGGNCCY | 3 cut(s) | 117, 844, 1118 |
| EcoO65I | GGTNACC | 1 cut(s) | 764 |
| EcoRII | CCWGG | 2 cut(s) | 265, 846 |
| EcoT14I | CCWWGG | 1 cut(s) | 291 |
| EcoT22I | ATGCAT | 2 cut(s) | 480, 1318 |
| ErhI | CCWWGG | 1 cut(s) | 291 |
| Esp3I | CGTCTC | 1 cut(s) | 340 |
| FaeI | CATG | 7 cut(s) | 295, 410, 428, 620, 919, 1252, 1272 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 87, 119, 155, 187 |
| FaqI | GGGAC | 1 cut(s) | 584 |
| FatI | CATG | 7 cut(s) | 291, 406, 424, 616, 915, 1248, 1268 |
| FauI | CCCGC | 2 cut(s) | 107, 152 |
| FauNDI | CATATG | 2 cut(s) | 124, 1318 |
| Fnu4HI | GCNGC | 4 cut(s) | 28, 429, 920, 1293 |
| FokI | GGATG | 3 cut(s) | 308, 344, 1207 |
| Fsp4HI | GCNGC | 4 cut(s) | 28, 429, 920, 1293 |
| FspBI | CTAG | 1 cut(s) | 950 |
| GlaI | GCGC | 2 cut(s) | 148, 357 |
| GluI | GCNGC | 4 cut(s) | 28, 429, 920, 1293 |
| GsaI | CCCAGC | 2 cut(s) | 75, 631 |
| HaeII | RGCGCY | 1 cut(s) | 150 |
| HaeIII | GGCC | 2 cut(s) | 119, 290 |
| HapII | CCGG | 2 cut(s) | 747, 759 |
| HhaI | GCGC | 2 cut(s) | 149, 358 |
| Hin1II | CATG | 7 cut(s) | 295, 410, 428, 620, 919, 1252, 1272 |
| Hin6I | GCGC | 2 cut(s) | 147, 356 |
| HinP1I | GCGC | 2 cut(s) | 147, 356 |
| HindIII | AAGCTT | 1 cut(s) | 101 |
| HinfI | GANTC | 4 cut(s) | 47, 178, 198, 1241 |
| HpaII | CCGG | 2 cut(s) | 747, 759 |
| HphI | GGTGA | 5 cut(s) | 68, 119, 124, 776, 1105 |
| Hpy188I | TCNGA | 7 cut(s) | 17, 52, 153, 379, 793, 1156, 1202 |
| Hpy188III | TCNNGA | 5 cut(s) | 64, 609, 698, 1026, 1328 |
| HpyAV | CCTTC | 2 cut(s) | 219, 1202 |
| HpyCH4III | ACNGT | 4 cut(s) | 56, 83, 961, 1089 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 100, 165, 362 |
| HpyF3I | CTNAG | 7 cut(s) | 150, 204, 446, 790, 923, 998, 1139 |
| Hsp92II | CATG | 7 cut(s) | 295, 410, 428, 620, 919, 1252, 1272 |
| HspAI | GCGC | 2 cut(s) | 147, 356 |
| Kzo9I | GATC | 3 cut(s) | 409, 970, 1190 |
| LguI | GCTCTTC | 1 cut(s) | 158 |
| Lsp1109I | GCAGC | 4 cut(s) | 14, 415, 931, 1279 |
| LweI | GCATC | 4 cut(s) | 465, 1090, 1267, 1279 |
| MaeI | CTAG | 1 cut(s) | 950 |
| MaeIII | GTNAC | 3 cut(s) | 130, 764, 1093 |
| MalI | GATC | 3 cut(s) | 411, 972, 1192 |
| MboI | GATC | 3 cut(s) | 409, 970, 1190 |
| MboII | GAAGA | 3 cut(s) | 175, 689, 905 |
| MfeI | CAATTG | 1 cut(s) | 713 |
| MhlI | GDGCHC | 1 cut(s) | 170 |
| MlsI | TGGCCA | 1 cut(s) | 290 |
| MluNI | TGGCCA | 1 cut(s) | 290 |
| MlyI | GAGTC | 1 cut(s) | 41 |
| MmeI | TCCRAC | 2 cut(s) | 580, 1180 |
| Mox20I | TGGCCA | 1 cut(s) | 290 |
| Mph1103I | ATGCAT | 2 cut(s) | 480, 1318 |
| MscI | TGGCCA | 1 cut(s) | 290 |
| MseI | TTAA | 6 cut(s) | 173, 465, 509, 566, 1173, 1354 |
| MslI | CAYNNNNRTG | 3 cut(s) | 173, 206, 296 |
| Msp20I | TGGCCA | 1 cut(s) | 290 |
| MspI | CCGG | 2 cut(s) | 747, 759 |
| MspR9I | CCNGG | 3 cut(s) | 267, 747, 848 |
| MunI | CAATTG | 1 cut(s) | 713 |
| Mva1269I | GAATGC | 6 cut(s) | 73, 116, 478, 598, 1103, 1318 |
| MvaI | CCWGG | 2 cut(s) | 267, 848 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 100, 165, 362 |
| NciI | CCSGG | 1 cut(s) | 747 |
| NcoI | CCATGG | 1 cut(s) | 291 |
| NdeI | CATATG | 2 cut(s) | 124, 1318 |
| NdeII | GATC | 3 cut(s) | 409, 970, 1190 |
| NlaIII | CATG | 7 cut(s) | 295, 410, 428, 620, 919, 1252, 1272 |
| NlaIV | GGNNCC | 5 cut(s) | 9, 118, 193, 230, 404 |
| NmuCI | GTSAC | 3 cut(s) | 130, 764, 1093 |
| NsiI | ATGCAT | 2 cut(s) | 480, 1318 |
| NspI | RCATGY | 3 cut(s) | 428, 1252, 1272 |
| PaeI | GCATGC | 2 cut(s) | 428, 1252 |
| PciSI | GCTCTTC | 1 cut(s) | 158 |
| PctI | GAATGC | 6 cut(s) | 73, 116, 478, 598, 1103, 1318 |
| PfeI | GAWTC | 3 cut(s) | 178, 198, 1241 |
| PkrI | GCNGC | 4 cut(s) | 29, 430, 921, 1294 |
| PleI | GAGTC | 1 cut(s) | 41 |
| PpsI | GAGTC | 1 cut(s) | 41 |
| PpuMI | RGGWCCY | 2 cut(s) | 844, 1118 |
| PshBI | ATTAAT | 1 cut(s) | 509 |
| Psp5II | RGGWCCY | 2 cut(s) | 844, 1118 |
| Psp6I | CCWGG | 2 cut(s) | 265, 846 |
| PspEI | GGTNACC | 1 cut(s) | 764 |
| PspFI | CCCAGC | 2 cut(s) | 71, 627 |
| PspGI | CCWGG | 2 cut(s) | 265, 846 |
| PspN4I | GGNNCC | 5 cut(s) | 9, 118, 193, 230, 404 |
| PspPI | GGNCC | 3 cut(s) | 117, 844, 1118 |
| PspPPI | RGGWCCY | 2 cut(s) | 844, 1118 |
| RsaI | GTAC | 5 cut(s) | 283, 307, 387, 625, 1049 |
| RsaNI | GTAC | 5 cut(s) | 282, 306, 386, 624, 1048 |
| RseI | CAYNNNNRTG | 3 cut(s) | 173, 206, 296 |
| SapI | GCTCTTC | 1 cut(s) | 158 |
| SaqAI | TTAA | 6 cut(s) | 173, 465, 509, 566, 1173, 1354 |
| SatI | GCNGC | 4 cut(s) | 28, 429, 920, 1293 |
| Sau3AI | GATC | 3 cut(s) | 409, 970, 1190 |
| Sau96I | GGNCC | 3 cut(s) | 117, 844, 1118 |
| ScaI | AGTACT | 1 cut(s) | 1049 |
| SchI | GAGTC | 1 cut(s) | 41 |
| ScrFI | CCNGG | 3 cut(s) | 267, 747, 848 |
| SduI | GDGCHC | 1 cut(s) | 170 |
| SfaNI | GCATC | 4 cut(s) | 465, 1090, 1267, 1279 |
| SfcI | CTRYAG | 1 cut(s) | 648 |
| SinI | GGWCC | 2 cut(s) | 844, 1118 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 173, 206, 296 |
| SmlI | CTYRAG | 1 cut(s) | 1328 |
| SmoI | CTYRAG | 1 cut(s) | 1328 |
| SphI | GCATGC | 2 cut(s) | 428, 1252 |
| SsiI | CCGC | 3 cut(s) | 114, 159, 879 |
| SspI | AATATT | 2 cut(s) | 23, 513 |
| SspMI | CTAG | 1 cut(s) | 950 |
| StyD4I | CCNGG | 3 cut(s) | 265, 745, 846 |
| StyI | CCWWGG | 1 cut(s) | 291 |
| TaaI | ACNGT | 4 cut(s) | 56, 83, 961, 1089 |
| TaqI | TCGA | 6 cut(s) | 45, 273, 633, 872, 1073, 1283 |
| TaqII | GACCGA | 1 cut(s) | 783 |
| TatI | WGTACW | 3 cut(s) | 281, 385, 1047 |
| TfiI | GAWTC | 3 cut(s) | 178, 198, 1241 |
| Tru1I | TTAA | 6 cut(s) | 173, 465, 509, 566, 1173, 1354 |
| Tru9I | TTAA | 6 cut(s) | 173, 465, 509, 566, 1173, 1354 |
| TscAI | CASTG | 1 cut(s) | 208 |
| TseFI | GTSAC | 3 cut(s) | 130, 764, 1093 |
| TseI | GCWGC | 4 cut(s) | 27, 428, 919, 1292 |
| Tsp45I | GTSAC | 3 cut(s) | 130, 764, 1093 |
| TspDTI | ATGAA | 7 cut(s) | 191, 471, 633, 651, 690, 904, 1209 |
| TspGWI | ACGGA | 1 cut(s) | 1213 |
| TspRI | CASTG | 1 cut(s) | 208 |
| VpaK11BI | GGWCC | 2 cut(s) | 844, 1118 |
| VspI | ATTAAT | 1 cut(s) | 509 |
| XapI | RAATTY | 5 cut(s) | 639, 794, 911, 1167, 1300 |
| XceI | RCATGY | 3 cut(s) | 428, 1252, 1272 |
| XspI | CTAG | 1 cut(s) | 950 |
| ZrmI | AGTACT | 1 cut(s) | 1049 |
| Zsp2I | ATGCAT | 2 cut(s) | 480, 1318 |