Protein ROOT HAIR DEFECTIVE 3 homolog
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 734 |
| Acc36I | ACCTGC | 1 cut(s) | 734 |
| AciI | CCGC | 3 cut(s) | 102, 147, 1334 |
| AclWI | GGATC | 1 cut(s) | 1179 |
| AcoI | YGGCCR | 1 cut(s) | 243 |
| AcsI | RAATTY | 7 cut(s) | 71, 185, 605, 718, 779, 1154, 1487 |
| AcuI | CTGAAG | 1 cut(s) | 1248 |
| AfaI | GTAC | 5 cut(s) | 475, 963, 1112, 1141, 1268 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 670, 775, 919 |
| AflIII | ACRYGT | 1 cut(s) | 943 |
| AgsI | TTSAA | 3 cut(s) | 52, 166, 931 |
| AjiI | CACGTC | 1 cut(s) | 944 |
| AjnI | CCWGG | 3 cut(s) | 315, 594, 769 |
| AluBI | AGCT | 6 cut(s) | 91, 341, 982, 987, 1465, 1538 |
| AluI | AGCT | 6 cut(s) | 91, 341, 982, 987, 1465, 1538 |
| Alw21I | GWGCWC | 1 cut(s) | 158 |
| Alw26I | GTCTC | 2 cut(s) | 515, 752 |
| AlwI | GGATC | 1 cut(s) | 1179 |
| AoxI | GGCC | 4 cut(s) | 243, 313, 597, 1531 |
| ApeKI | GCWGC | 8 cut(s) | 203, 206, 341, 390, 416, 706, 979, 1232 |
| ApoI | RAATTY | 7 cut(s) | 71, 185, 605, 718, 779, 1154, 1487 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1203, 1466 |
| AspLEI | GCGC | 2 cut(s) | 355, 390 |
| AspS9I | GGNCC | 6 cut(s) | 134, 598, 766, 956, 1027, 1288 |
| AsuHPI | GGTGA | 2 cut(s) | 761, 1090 |
| AsuII | TTCGAA | 1 cut(s) | 1423 |
| AsuNHI | GCTAGC | 1 cut(s) | 355 |
| AvaII | GGWCC | 5 cut(s) | 134, 766, 956, 1027, 1288 |
| Bbv12I | GWGCWC | 1 cut(s) | 158 |
| BbvI | GCAGC | 8 cut(s) | 215, 218, 328, 377, 428, 693, 991, 1244 |
| BccI | CCATC | 4 cut(s) | 35, 177, 293, 672 |
| BceAI | ACGGC | 2 cut(s) | 52, 465 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1221, 1255 |
| BciT130I | CCWGG | 3 cut(s) | 317, 596, 771 |
| BcoDI | GTCTC | 2 cut(s) | 515, 752 |
| BfaI | CTAG | 2 cut(s) | 356, 1535 |
| BfmI | CTRYAG | 1 cut(s) | 391 |
| BfuAI | ACCTGC | 1 cut(s) | 734 |
| BisI | GCNGC | 8 cut(s) | 204, 207, 342, 391, 417, 707, 980, 1233 |
| BlpI | GCTNAGC | 1 cut(s) | 983 |
| BlsI | GCNGC | 8 cut(s) | 205, 208, 343, 392, 418, 708, 981, 1234 |
| BmcAI | AGTACT | 2 cut(s) | 475, 1268 |
| Bme1390I | CCNGG | 3 cut(s) | 317, 596, 771 |
| Bme18I | GGWCC | 5 cut(s) | 134, 766, 956, 1027, 1288 |
| BmgBI | CACGTC | 1 cut(s) | 944 |
| BmgT120I | GGNCC | 6 cut(s) | 134, 598, 766, 956, 1027, 1288 |
| BmiI | GGNNCC | 3 cut(s) | 135, 768, 1290 |
| BmrFI | CCNGG | 3 cut(s) | 317, 596, 771 |
| BmsI | GCATC | 2 cut(s) | 1387, 1409 |
| BmtI | GCTAGC | 1 cut(s) | 359 |
| BoxI | GACNNNNGTC | 1 cut(s) | 764 |
| BpmI | CTGGAG | 1 cut(s) | 1524 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 983 |
| Bpu14I | TTCGAA | 1 cut(s) | 1423 |
| BpuEI | CTTGAG | 1 cut(s) | 721 |
| BsaAI | YACGTR | 1 cut(s) | 509 |
| BsaJI | CCNNGG | 3 cut(s) | 594, 769, 1284 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 670, 775, 919 |
| Bse1I | ACTGG | 1 cut(s) | 959 |
| BseBI | CCWGG | 3 cut(s) | 317, 596, 771 |
| BseDI | CCNNGG | 3 cut(s) | 594, 769, 1284 |
| BseGI | GGATG | 6 cut(s) | 583, 660, 1099, 1278, 1402, 1419 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 670, 775, 919 |
| BseMII | CTCAG | 3 cut(s) | 152, 425, 997 |
| BseNI | ACTGG | 1 cut(s) | 959 |
| BseRI | GAGGAG | 2 cut(s) | 701, 1037 |
| BseXI | GCAGC | 8 cut(s) | 215, 218, 328, 377, 428, 693, 991, 1244 |
| BseYI | CCCAGC | 1 cut(s) | 95 |
| BsgI | GTGCAG | 1 cut(s) | 828 |
| BshFI | GGCC | 4 cut(s) | 245, 315, 599, 1533 |
| BsiHKAI | GWGCWC | 1 cut(s) | 158 |
| BsiWI | CGTACG | 1 cut(s) | 1110 |
| BslFI | GGGAC | 2 cut(s) | 147, 752 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 670, 775, 919 |
| BsmAI | GTCTC | 2 cut(s) | 515, 752 |
| BsmFI | GGGAC | 2 cut(s) | 147, 752 |
| BsmI | GAATGC | 2 cut(s) | 205, 418 |
| BsnI | GGCC | 4 cut(s) | 245, 315, 599, 1533 |
| Bsp119I | TTCGAA | 1 cut(s) | 1423 |
| Bsp1286I | GDGCHC | 1 cut(s) | 158 |
| Bsp1407I | TGTACA | 1 cut(s) | 1139 |
| Bsp143I | GATC | 4 cut(s) | 10, 901, 1047, 1171 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 983 |
| BspACI | CCGC | 3 cut(s) | 102, 147, 1334 |
| BspANI | GGCC | 4 cut(s) | 245, 315, 599, 1533 |
| BspCNI | CTCAG | 3 cut(s) | 151, 426, 996 |
| BspHI | TCATGA | 3 cut(s) | 1315, 1339, 1458 |
| BspLI | GGNNCC | 3 cut(s) | 135, 768, 1290 |
| BspMAI | CTGCAG | 1 cut(s) | 395 |
| BspMI | ACCTGC | 1 cut(s) | 734 |
| BspOI | GCTAGC | 1 cut(s) | 359 |
| BspPI | GGATC | 1 cut(s) | 1179 |
| BspQI | GCTCTTC | 1 cut(s) | 146 |
| BspT104I | TTCGAA | 1 cut(s) | 1423 |
| BsrGI | TGTACA | 1 cut(s) | 1139 |
| BsrI | ACTGG | 1 cut(s) | 959 |
| BssECI | CCNNGG | 3 cut(s) | 594, 769, 1284 |
| BssMI | GATC | 4 cut(s) | 10, 901, 1047, 1171 |
| BssT1I | CCWWGG | 1 cut(s) | 1284 |
| Bst2UI | CCWGG | 3 cut(s) | 317, 596, 771 |
| Bst4CI | ACNGT | 6 cut(s) | 17, 442, 763, 868, 1374, 1478 |
| Bst6I | CTCTTC | 2 cut(s) | 146, 513 |
| BstAUI | TGTACA | 1 cut(s) | 1139 |
| BstBAI | YACGTR | 1 cut(s) | 509 |
| BstBI | TTCGAA | 1 cut(s) | 1423 |
| BstC8I | GCNNGC | 6 cut(s) | 93, 243, 357, 741, 1121, 1443 |
| BstDEI | CTNAG | 4 cut(s) | 138, 434, 983, 1270 |
| BstF5I | GGATG | 6 cut(s) | 583, 660, 1099, 1278, 1402, 1419 |
| BstHHI | GCGC | 2 cut(s) | 355, 390 |
| BstKTI | GATC | 4 cut(s) | 13, 904, 1050, 1174 |
| BstMAI | GTCTC | 2 cut(s) | 515, 752 |
| BstMBI | GATC | 4 cut(s) | 10, 901, 1047, 1171 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 153, 300, 350 |
| BstNI | CCWGG | 3 cut(s) | 317, 596, 771 |
| BstNSI | RCATGY | 2 cut(s) | 1123, 1445 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 764 |
| BstSCI | CCNGG | 3 cut(s) | 315, 594, 769 |
| BstSFI | CTRYAG | 1 cut(s) | 391 |
| BstV1I | GCAGC | 8 cut(s) | 215, 218, 328, 377, 428, 693, 991, 1244 |
| BsuRI | GGCC | 4 cut(s) | 245, 315, 599, 1533 |
| BtgZI | GCGATG | 1 cut(s) | 54 |
| BtrI | CACGTC | 1 cut(s) | 944 |
| BtsCI | GGATG | 6 cut(s) | 583, 660, 1099, 1278, 1402, 1419 |
| BtsI | GCAGTG | 1 cut(s) | 400 |
| BtsIMutI | CAGTG | 2 cut(s) | 22, 400 |
| BveI | ACCTGC | 1 cut(s) | 734 |
| Cac8I | GCNNGC | 6 cut(s) | 93, 243, 357, 741, 1121, 1443 |
| CciI | TCATGA | 3 cut(s) | 1315, 1339, 1458 |
| CfoI | GCGC | 2 cut(s) | 355, 390 |
| Cfr13I | GGNCC | 6 cut(s) | 134, 598, 766, 956, 1027, 1288 |
| Csp6I | GTAC | 5 cut(s) | 474, 962, 1111, 1140, 1267 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 785, 820 |
| CviAII | CATG | 9 cut(s) | 22, 280, 454, 1120, 1316, 1340, 1442, 1459, 1471 |
| CviQI | GTAC | 5 cut(s) | 474, 962, 1111, 1140, 1267 |
| DdeI | CTNAG | 4 cut(s) | 138, 434, 983, 1270 |
| DpnI | GATC | 4 cut(s) | 12, 903, 1049, 1173 |
| DpnII | GATC | 4 cut(s) | 10, 901, 1047, 1171 |
| DraI | TTTAAA | 2 cut(s) | 717, 1159 |
| EaeI | YGGCCR | 1 cut(s) | 243 |
| Eam1104I | CTCTTC | 2 cut(s) | 146, 513 |
| EarI | CTCTTC | 2 cut(s) | 146, 513 |
| Eco130I | CCWWGG | 1 cut(s) | 1284 |
| Eco147I | AGGCCT | 1 cut(s) | 1533 |
| Eco32I | GATATC | 1 cut(s) | 1497 |
| Eco47I | GGWCC | 5 cut(s) | 134, 766, 956, 1027, 1288 |
| Eco57I | CTGAAG | 1 cut(s) | 1248 |
| EcoO109I | RGGNCCY | 2 cut(s) | 134, 1288 |
| EcoRII | CCWGG | 3 cut(s) | 315, 594, 769 |
| EcoRV | GATATC | 1 cut(s) | 1497 |
| EcoT14I | CCWWGG | 1 cut(s) | 1284 |
| EcoT22I | ATGCAT | 1 cut(s) | 1402 |
| ErhI | CCWWGG | 1 cut(s) | 1284 |
| FaeI | CATG | 9 cut(s) | 25, 283, 457, 1123, 1319, 1343, 1445, 1462, 1474 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 75, 107, 723, 755 |
| FaqI | GGGAC | 2 cut(s) | 147, 752 |
| FatI | CATG | 9 cut(s) | 21, 279, 453, 1119, 1315, 1339, 1441, 1458, 1470 |
| FauI | CCCGC | 1 cut(s) | 140 |
| Fnu4HI | GCNGC | 8 cut(s) | 204, 207, 342, 391, 417, 707, 980, 1233 |
| FokI | GGATG | 6 cut(s) | 590, 647, 1106, 1265, 1409, 1426 |
| Fsp4HI | GCNGC | 8 cut(s) | 204, 207, 342, 391, 417, 707, 980, 1233 |
| FspBI | CTAG | 2 cut(s) | 356, 1535 |
| GlaI | GCGC | 2 cut(s) | 354, 389 |
| GluI | GCNGC | 8 cut(s) | 204, 207, 342, 391, 417, 707, 980, 1233 |
| GsaI | CCCAGC | 1 cut(s) | 99 |
| GsuI | CTGGAG | 1 cut(s) | 1524 |
| HaeIII | GGCC | 4 cut(s) | 245, 315, 599, 1533 |
| HhaI | GCGC | 2 cut(s) | 355, 390 |
| Hin1II | CATG | 9 cut(s) | 25, 283, 457, 1123, 1319, 1343, 1445, 1462, 1474 |
| Hin6I | GCGC | 2 cut(s) | 353, 388 |
| HinP1I | GCGC | 2 cut(s) | 353, 388 |
| HincII | GTYRAC | 1 cut(s) | 1180 |
| HindII | GTYRAC | 1 cut(s) | 1180 |
| HindIII | AAGCTT | 1 cut(s) | 89 |
| HinfI | GANTC | 6 cut(s) | 523, 615, 835, 1312, 1505, 1548 |
| HpaI | GTTAAC | 1 cut(s) | 1180 |
| HphI | GGTGA | 2 cut(s) | 761, 1090 |
| Hpy166II | GTNNAC | 3 cut(s) | 794, 1102, 1180 |
| Hpy188I | TCNGA | 8 cut(s) | 141, 367, 486, 588, 669, 1012, 1243, 1413 |
| Hpy188III | TCNNGA | 9 cut(s) | 65, 271, 407, 920, 1051, 1316, 1340, 1459, 1509 |
| Hpy8I | GTNNAC | 3 cut(s) | 794, 1102, 1180 |
| Hpy99I | CGWCG | 3 cut(s) | 38, 493, 945 |
| HpyAV | CCTTC | 3 cut(s) | 73, 210, 725 |
| HpyCH4III | ACNGT | 6 cut(s) | 17, 442, 763, 868, 1374, 1478 |
| HpyCH4IV | ACGT | 4 cut(s) | 491, 508, 943, 1063 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 153, 300, 350 |
| HpyF3I | CTNAG | 4 cut(s) | 138, 434, 983, 1270 |
| HpySE526I | ACGT | 4 cut(s) | 491, 508, 943, 1063 |
| Hsp92II | CATG | 9 cut(s) | 25, 283, 457, 1123, 1319, 1343, 1445, 1462, 1474 |
| HspAI | GCGC | 2 cut(s) | 353, 388 |
| KspAI | GTTAAC | 1 cut(s) | 1180 |
| Kzo9I | GATC | 4 cut(s) | 10, 901, 1047, 1171 |
| LguI | GCTCTTC | 1 cut(s) | 146 |
| LmnI | GCTCC | 1 cut(s) | 1543 |
| Lsp1109I | GCAGC | 8 cut(s) | 215, 218, 328, 377, 428, 693, 991, 1244 |
| LweI | GCATC | 2 cut(s) | 1387, 1409 |
| MaeI | CTAG | 2 cut(s) | 356, 1535 |
| MaeII | ACGT | 4 cut(s) | 491, 508, 943, 1063 |
| MaeIII | GTNAC | 2 cut(s) | 1513, 1561 |
| MalI | GATC | 4 cut(s) | 12, 903, 1049, 1173 |
| MboI | GATC | 4 cut(s) | 10, 901, 1047, 1171 |
| MboII | GAAGA | 6 cut(s) | 163, 225, 530, 830, 902, 1208 |
| MhlI | GDGCHC | 1 cut(s) | 158 |
| MlyI | GAGTC | 1 cut(s) | 517 |
| MmeI | TCCRAC | 1 cut(s) | 510 |
| Mph1103I | ATGCAT | 1 cut(s) | 1402 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1203, 1466 |
| MseI | TTAA | 9 cut(s) | 261, 494, 681, 716, 1158, 1179, 1329, 1389, 1520 |
| MslI | CAYNNNNRTG | 2 cut(s) | 374, 1412 |
| MspR9I | CCNGG | 3 cut(s) | 317, 596, 771 |
| Mva1269I | GAATGC | 2 cut(s) | 205, 418 |
| MvaI | CCWGG | 3 cut(s) | 317, 596, 771 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 153, 300, 350 |
| NdeII | GATC | 4 cut(s) | 10, 901, 1047, 1171 |
| NheI | GCTAGC | 1 cut(s) | 355 |
| NlaIII | CATG | 9 cut(s) | 25, 283, 457, 1123, 1319, 1343, 1445, 1462, 1474 |
| NlaIV | GGNNCC | 3 cut(s) | 135, 768, 1290 |
| NmeAIII | GCCGAG | 1 cut(s) | 271 |
| NmuCI | GTSAC | 2 cut(s) | 1513, 1561 |
| NsiI | ATGCAT | 1 cut(s) | 1402 |
| NspI | RCATGY | 2 cut(s) | 1123, 1445 |
| NspV | TTCGAA | 1 cut(s) | 1423 |
| PaeI | GCATGC | 2 cut(s) | 1123, 1445 |
| PagI | TCATGA | 3 cut(s) | 1315, 1339, 1458 |
| PaqCI | CACCTGC | 1 cut(s) | 734 |
| PceI | AGGCCT | 1 cut(s) | 1533 |
| PciSI | GCTCTTC | 1 cut(s) | 146 |
| PctI | GAATGC | 2 cut(s) | 205, 418 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1203, 1466 |
| PfeI | GAWTC | 5 cut(s) | 615, 835, 1312, 1505, 1548 |
| Pfl23II | CGTACG | 1 cut(s) | 1110 |
| PkrI | GCNGC | 8 cut(s) | 205, 208, 343, 392, 418, 708, 981, 1234 |
| PleI | GAGTC | 1 cut(s) | 517 |
| PpsI | GAGTC | 1 cut(s) | 517 |
| Ppu21I | YACGTR | 1 cut(s) | 509 |
| PpuMI | RGGWCCY | 2 cut(s) | 134, 1288 |
| PshAI | GACNNNNGTC | 1 cut(s) | 764 |
| Psp5II | RGGWCCY | 2 cut(s) | 134, 1288 |
| Psp6I | CCWGG | 3 cut(s) | 315, 594, 769 |
| PspFI | CCCAGC | 1 cut(s) | 95 |
| PspGI | CCWGG | 3 cut(s) | 315, 594, 769 |
| PspLI | CGTACG | 1 cut(s) | 1110 |
| PspN4I | GGNNCC | 3 cut(s) | 135, 768, 1290 |
| PspPI | GGNCC | 6 cut(s) | 134, 598, 766, 956, 1027, 1288 |
| PspPPI | RGGWCCY | 2 cut(s) | 134, 1288 |
| PstI | CTGCAG | 1 cut(s) | 395 |
| RsaI | GTAC | 5 cut(s) | 475, 963, 1112, 1141, 1268 |
| RsaNI | GTAC | 5 cut(s) | 474, 962, 1111, 1140, 1267 |
| RseI | CAYNNNNRTG | 2 cut(s) | 374, 1412 |
| SapI | GCTCTTC | 1 cut(s) | 146 |
| SaqAI | TTAA | 9 cut(s) | 261, 494, 681, 716, 1158, 1179, 1329, 1389, 1520 |
| SatI | GCNGC | 8 cut(s) | 204, 207, 342, 391, 417, 707, 980, 1233 |
| Sau3AI | GATC | 4 cut(s) | 10, 901, 1047, 1171 |
| Sau96I | GGNCC | 6 cut(s) | 134, 598, 766, 956, 1027, 1288 |
| ScaI | AGTACT | 2 cut(s) | 475, 1268 |
| SchI | GAGTC | 1 cut(s) | 517 |
| ScrFI | CCNGG | 3 cut(s) | 317, 596, 771 |
| SduI | GDGCHC | 1 cut(s) | 158 |
| SfaNI | GCATC | 2 cut(s) | 1387, 1409 |
| SfcI | CTRYAG | 1 cut(s) | 391 |
| SfuI | TTCGAA | 1 cut(s) | 1423 |
| SinI | GGWCC | 5 cut(s) | 134, 766, 956, 1027, 1288 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 374, 1412 |
| SmlI | CTYRAG | 1 cut(s) | 700 |
| SmoI | CTYRAG | 1 cut(s) | 700 |
| SphI | GCATGC | 2 cut(s) | 1123, 1445 |
| SseBI | AGGCCT | 1 cut(s) | 1533 |
| SsiI | CCGC | 3 cut(s) | 102, 147, 1334 |
| SspMI | CTAG | 2 cut(s) | 356, 1535 |
| StuI | AGGCCT | 1 cut(s) | 1533 |
| StyD4I | CCNGG | 3 cut(s) | 315, 594, 769 |
| StyI | CCWWGG | 1 cut(s) | 1284 |
| TaaI | ACNGT | 6 cut(s) | 17, 442, 763, 868, 1374, 1478 |
| TaiI | ACGT | 4 cut(s) | 494, 511, 946, 1066 |
| TaqI | TCGA | 5 cut(s) | 33, 406, 618, 1125, 1423 |
| TatI | WGTACW | 4 cut(s) | 473, 961, 1139, 1266 |
| TfiI | GAWTC | 5 cut(s) | 615, 835, 1312, 1505, 1548 |
| Tru1I | TTAA | 9 cut(s) | 261, 494, 681, 716, 1158, 1179, 1329, 1389, 1520 |
| Tru9I | TTAA | 9 cut(s) | 261, 494, 681, 716, 1158, 1179, 1329, 1389, 1520 |
| TscAI | CASTG | 2 cut(s) | 22, 400 |
| TseFI | GTSAC | 2 cut(s) | 1513, 1561 |
| TseI | GCWGC | 8 cut(s) | 203, 206, 341, 390, 416, 706, 979, 1232 |
| Tsp45I | GTSAC | 2 cut(s) | 1513, 1561 |
| TspGWI | ACGGA | 2 cut(s) | 516, 1124 |
| TspRI | CASTG | 2 cut(s) | 22, 400 |
| VpaK11BI | GGWCC | 5 cut(s) | 134, 766, 956, 1027, 1288 |
| XapI | RAATTY | 7 cut(s) | 71, 185, 605, 718, 779, 1154, 1487 |
| XceI | RCATGY | 2 cut(s) | 1123, 1445 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1203, 1466 |
| XspI | CTAG | 2 cut(s) | 356, 1535 |
| ZrmI | AGTACT | 2 cut(s) | 475, 1268 |
| Zsp2I | ATGCAT | 1 cut(s) | 1402 |