Protein ROOT HAIR DEFECTIVE 3 homolog
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 380 |
| AccI | GTMKAC | 1 cut(s) | 465 |
| AccIII | TCCGGA | 1 cut(s) | 409 |
| AciI | CCGC | 3 cut(s) | 102, 147, 501 |
| AclWI | GGATC | 1 cut(s) | 420 |
| AcoI | YGGCCR | 1 cut(s) | 243 |
| AcsI | RAATTY | 1 cut(s) | 185 |
| AgsI | TTSAA | 5 cut(s) | 52, 166, 455, 643, 693 |
| AjnI | CCWGG | 1 cut(s) | 315 |
| AluBI | AGCT | 3 cut(s) | 91, 341, 602 |
| AluI | AGCT | 3 cut(s) | 91, 341, 602 |
| Alw21I | GWGCWC | 1 cut(s) | 158 |
| AlwI | GGATC | 1 cut(s) | 420 |
| Aor13HI | TCCGGA | 1 cut(s) | 409 |
| AoxI | GGCC | 3 cut(s) | 243, 313, 625 |
| ApeKI | GCWGC | 1 cut(s) | 341 |
| ApoI | RAATTY | 1 cut(s) | 185 |
| AspLEI | GCGC | 2 cut(s) | 20, 355 |
| AspS9I | GGNCC | 1 cut(s) | 134 |
| AsuHPI | GGTGA | 1 cut(s) | 524 |
| AsuNHI | GCTAGC | 1 cut(s) | 355 |
| AvaII | GGWCC | 1 cut(s) | 134 |
| BbsI | GAAGAC | 2 cut(s) | 808, 814 |
| Bbv12I | GWGCWC | 1 cut(s) | 158 |
| BbvI | GCAGC | 1 cut(s) | 328 |
| BccI | CCATC | 4 cut(s) | 35, 293, 670, 736 |
| BceAI | ACGGC | 2 cut(s) | 52, 457 |
| BciT130I | CCWGG | 1 cut(s) | 317 |
| BfaI | CTAG | 2 cut(s) | 356, 546 |
| BfoI | RGCGCY | 1 cut(s) | 21 |
| BglII | AGATCT | 1 cut(s) | 420 |
| BisI | GCNGC | 1 cut(s) | 342 |
| BlsI | GCNGC | 1 cut(s) | 343 |
| Bme1390I | CCNGG | 1 cut(s) | 317 |
| Bme18I | GGWCC | 1 cut(s) | 134 |
| BmgT120I | GGNCC | 1 cut(s) | 134 |
| BmiI | GGNNCC | 2 cut(s) | 135, 524 |
| BmrFI | CCNGG | 1 cut(s) | 317 |
| BmsI | GCATC | 1 cut(s) | 630 |
| BmtI | GCTAGC | 1 cut(s) | 359 |
| BpiI | GAAGAC | 2 cut(s) | 808, 814 |
| BsaWI | WCCGGW | 1 cut(s) | 409 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 482, 512 |
| Bse3DI | GCAATG | 1 cut(s) | 513 |
| BseAI | TCCGGA | 1 cut(s) | 409 |
| BseBI | CCWGG | 1 cut(s) | 317 |
| BseGI | GGATG | 1 cut(s) | 680 |
| BseMI | GCAATG | 1 cut(s) | 513 |
| BseMII | CTCAG | 4 cut(s) | 87, 152, 459, 767 |
| BseRI | GAGGAG | 1 cut(s) | 833 |
| BseXI | GCAGC | 1 cut(s) | 328 |
| BseYI | CCCAGC | 1 cut(s) | 518 |
| BshFI | GGCC | 3 cut(s) | 245, 315, 627 |
| BsiHKAI | GWGCWC | 1 cut(s) | 158 |
| BsiSI | CCGG | 1 cut(s) | 410 |
| BslFI | GGGAC | 1 cut(s) | 147 |
| BsmFI | GGGAC | 1 cut(s) | 147 |
| BsmI | GAATGC | 1 cut(s) | 205 |
| BsnI | GGCC | 3 cut(s) | 245, 315, 627 |
| Bsp1286I | GDGCHC | 1 cut(s) | 158 |
| Bsp13I | TCCGGA | 1 cut(s) | 409 |
| Bsp143I | GATC | 4 cut(s) | 10, 412, 420, 529 |
| BspACI | CCGC | 3 cut(s) | 102, 147, 501 |
| BspANI | GGCC | 3 cut(s) | 245, 315, 627 |
| BspCNI | CTCAG | 4 cut(s) | 88, 151, 458, 766 |
| BspEI | TCCGGA | 1 cut(s) | 409 |
| BspLI | GGNNCC | 2 cut(s) | 135, 524 |
| BspOI | GCTAGC | 1 cut(s) | 359 |
| BspPI | GGATC | 1 cut(s) | 420 |
| BspQI | GCTCTTC | 1 cut(s) | 146 |
| BsrDI | GCAATG | 1 cut(s) | 513 |
| BssMI | GATC | 4 cut(s) | 10, 412, 420, 529 |
| Bst2UI | CCWGG | 1 cut(s) | 317 |
| Bst4CI | ACNGT | 1 cut(s) | 536 |
| Bst6I | CTCTTC | 2 cut(s) | 146, 822 |
| BstC8I | GCNNGC | 3 cut(s) | 93, 243, 357 |
| BstDEI | CTNAG | 4 cut(s) | 96, 138, 445, 753 |
| BstF5I | GGATG | 1 cut(s) | 680 |
| BstH2I | RGCGCY | 1 cut(s) | 21 |
| BstHHI | GCGC | 2 cut(s) | 20, 355 |
| BstKTI | GATC | 4 cut(s) | 13, 415, 423, 532 |
| BstMBI | GATC | 4 cut(s) | 10, 412, 420, 529 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 153, 300, 350 |
| BstNI | CCWGG | 1 cut(s) | 317 |
| BstSCI | CCNGG | 1 cut(s) | 315 |
| BstV1I | GCAGC | 1 cut(s) | 328 |
| BstV2I | GAAGAC | 2 cut(s) | 808, 814 |
| BstX2I | RGATCY | 1 cut(s) | 420 |
| BstYI | RGATCY | 1 cut(s) | 420 |
| BsuRI | GGCC | 3 cut(s) | 245, 315, 627 |
| BtgZI | GCGATG | 1 cut(s) | 54 |
| BtsCI | GGATG | 1 cut(s) | 680 |
| BtsI | GCAGTG | 1 cut(s) | 721 |
| BtsIMutI | CAGTG | 1 cut(s) | 721 |
| Cac8I | GCNNGC | 3 cut(s) | 93, 243, 357 |
| CfoI | GCGC | 2 cut(s) | 20, 355 |
| Cfr13I | GGNCC | 1 cut(s) | 134 |
| CseI | GACGC | 2 cut(s) | 482, 749 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 496, 531 |
| CviAII | CATG | 3 cut(s) | 22, 280, 815 |
| CviJI | RGCY | 9 cut(s) | 91, 241, 245, 265, 315, 341, 444, 602, 627 |
| CviKI_1 | RGCY | 9 cut(s) | 91, 241, 245, 265, 315, 341, 444, 602, 627 |
| DdeI | CTNAG | 4 cut(s) | 96, 138, 445, 753 |
| DpnI | GATC | 4 cut(s) | 12, 414, 422, 531 |
| DpnII | GATC | 4 cut(s) | 10, 412, 420, 529 |
| EaeI | YGGCCR | 1 cut(s) | 243 |
| Eam1104I | CTCTTC | 2 cut(s) | 146, 822 |
| EarI | CTCTTC | 2 cut(s) | 146, 822 |
| EciI | GGCGGA | 1 cut(s) | 490 |
| Eco47I | GGWCC | 1 cut(s) | 134 |
| EcoO109I | RGGNCCY | 1 cut(s) | 134 |
| EcoRII | CCWGG | 1 cut(s) | 315 |
| EcoT22I | ATGCAT | 1 cut(s) | 585 |
| FaeI | CATG | 3 cut(s) | 25, 283, 818 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 75, 107 |
| FaqI | GGGAC | 1 cut(s) | 147 |
| FatI | CATG | 3 cut(s) | 21, 279, 814 |
| FauI | CCCGC | 1 cut(s) | 140 |
| FauNDI | CATATG | 1 cut(s) | 574 |
| FblI | GTMKAC | 1 cut(s) | 465 |
| Fnu4HI | GCNGC | 1 cut(s) | 342 |
| FokI | GGATG | 1 cut(s) | 667 |
| Fsp4HI | GCNGC | 1 cut(s) | 342 |
| FspBI | CTAG | 2 cut(s) | 356, 546 |
| GlaI | GCGC | 2 cut(s) | 19, 354 |
| GluI | GCNGC | 1 cut(s) | 342 |
| GsaI | CCCAGC | 1 cut(s) | 522 |
| HaeII | RGCGCY | 1 cut(s) | 21 |
| HaeIII | GGCC | 3 cut(s) | 245, 315, 627 |
| HapII | CCGG | 1 cut(s) | 410 |
| HgaI | GACGC | 2 cut(s) | 482, 749 |
| HhaI | GCGC | 2 cut(s) | 20, 355 |
| Hin1II | CATG | 3 cut(s) | 25, 283, 818 |
| Hin6I | GCGC | 2 cut(s) | 18, 353 |
| HinP1I | GCGC | 2 cut(s) | 18, 353 |
| HindIII | AAGCTT | 1 cut(s) | 89 |
| HinfI | GANTC | 7 cut(s) | 105, 166, 320, 391, 406, 494, 748 |
| HpaII | CCGG | 1 cut(s) | 410 |
| HphI | GGTGA | 1 cut(s) | 524 |
| Hpy166II | GTNNAC | 2 cut(s) | 433, 466 |
| Hpy188I | TCNGA | 9 cut(s) | 141, 367, 402, 420, 448, 611, 637, 747, 756 |
| Hpy188III | TCNNGA | 3 cut(s) | 65, 271, 410 |
| Hpy8I | GTNNAC | 2 cut(s) | 433, 466 |
| Hpy99I | CGWCG | 3 cut(s) | 38, 476, 670 |
| HpyAV | CCTTC | 4 cut(s) | 73, 203, 449, 687 |
| HpyCH4III | ACNGT | 1 cut(s) | 536 |
| HpyCH4V | TGCA | 5 cut(s) | 25, 203, 326, 583, 673 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 153, 300, 350 |
| HpyF3I | CTNAG | 4 cut(s) | 96, 138, 445, 753 |
| Hsp92II | CATG | 3 cut(s) | 25, 283, 818 |
| HspAI | GCGC | 2 cut(s) | 18, 353 |
| Kpn2I | TCCGGA | 1 cut(s) | 409 |
| Kzo9I | GATC | 4 cut(s) | 10, 412, 420, 529 |
| LguI | GCTCTTC | 1 cut(s) | 146 |
| LmnI | GCTCC | 1 cut(s) | 748 |
| Lsp1109I | GCAGC | 1 cut(s) | 328 |
| LweI | GCATC | 1 cut(s) | 630 |
| MaeI | CTAG | 2 cut(s) | 356, 546 |
| MaeIII | GTNAC | 1 cut(s) | 488 |
| MalI | GATC | 4 cut(s) | 12, 414, 422, 531 |
| MboI | GATC | 4 cut(s) | 10, 412, 420, 529 |
| MflI | RGATCY | 1 cut(s) | 420 |
| MhlI | GDGCHC | 1 cut(s) | 158 |
| MluCI | AATT | 5 cut(s) | 185, 360, 375, 593, 704 |
| MlyI | GAGTC | 2 cut(s) | 400, 503 |
| Mph1103I | ATGCAT | 1 cut(s) | 585 |
| MroI | TCCGGA | 1 cut(s) | 409 |
| MseI | TTAA | 1 cut(s) | 261 |
| MspI | CCGG | 1 cut(s) | 410 |
| MspR9I | CCNGG | 1 cut(s) | 317 |
| Mva1269I | GAATGC | 1 cut(s) | 205 |
| MvaI | CCWGG | 1 cut(s) | 317 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 153, 300, 350 |
| NdeI | CATATG | 1 cut(s) | 574 |
| NdeII | GATC | 4 cut(s) | 10, 412, 420, 529 |
| NheI | GCTAGC | 1 cut(s) | 355 |
| NlaIII | CATG | 3 cut(s) | 25, 283, 818 |
| NlaIV | GGNNCC | 2 cut(s) | 135, 524 |
| NmeAIII | GCCGAG | 1 cut(s) | 271 |
| NsiI | ATGCAT | 1 cut(s) | 585 |
| PciSI | GCTCTTC | 1 cut(s) | 146 |
| PctI | GAATGC | 1 cut(s) | 205 |
| PfeI | GAWTC | 5 cut(s) | 105, 166, 320, 406, 748 |
| PkrI | GCNGC | 1 cut(s) | 343 |
| PleI | GAGTC | 2 cut(s) | 399, 502 |
| PpsI | GAGTC | 2 cut(s) | 399, 502 |
| PpuMI | RGGWCCY | 1 cut(s) | 134 |
| PsiI | TTATAA | 1 cut(s) | 380 |
| Psp5II | RGGWCCY | 1 cut(s) | 134 |
| Psp6I | CCWGG | 1 cut(s) | 315 |
| PspFI | CCCAGC | 1 cut(s) | 518 |
| PspGI | CCWGG | 1 cut(s) | 315 |
| PspN4I | GGNNCC | 2 cut(s) | 135, 524 |
| PspPI | GGNCC | 1 cut(s) | 134 |
| PspPPI | RGGWCCY | 1 cut(s) | 134 |
| PsuI | RGATCY | 1 cut(s) | 420 |
| SapI | GCTCTTC | 1 cut(s) | 146 |
| SaqAI | TTAA | 1 cut(s) | 261 |
| SatI | GCNGC | 1 cut(s) | 342 |
| Sau3AI | GATC | 4 cut(s) | 10, 412, 420, 529 |
| Sau96I | GGNCC | 1 cut(s) | 134 |
| SchI | GAGTC | 2 cut(s) | 400, 503 |
| ScrFI | CCNGG | 1 cut(s) | 317 |
| SduI | GDGCHC | 1 cut(s) | 158 |
| SetI | ASST | 9 cut(s) | 93, 139, 343, 432, 465, 512, 551, 604, 712 |
| SfaNI | GCATC | 1 cut(s) | 630 |
| SinI | GGWCC | 1 cut(s) | 134 |
| Sse9I | AATT | 5 cut(s) | 185, 360, 375, 593, 704 |
| SsiI | CCGC | 3 cut(s) | 102, 147, 501 |
| SspI | AATATT | 1 cut(s) | 385 |
| SspMI | CTAG | 2 cut(s) | 356, 546 |
| StyD4I | CCNGG | 1 cut(s) | 315 |
| TaaI | ACNGT | 1 cut(s) | 536 |
| TaqI | TCGA | 1 cut(s) | 33 |
| TasI | AATT | 5 cut(s) | 185, 360, 375, 593, 704 |
| TfiI | GAWTC | 5 cut(s) | 105, 166, 320, 406, 748 |
| Tru1I | TTAA | 1 cut(s) | 261 |
| Tru9I | TTAA | 1 cut(s) | 261 |
| TscAI | CASTG | 1 cut(s) | 728 |
| TseI | GCWGC | 1 cut(s) | 341 |
| TspDTI | ATGAA | 2 cut(s) | 212, 669 |
| TspRI | CASTG | 1 cut(s) | 728 |
| VpaK11BI | GGWCC | 1 cut(s) | 134 |
| XapI | RAATTY | 1 cut(s) | 185 |
| XmiI | GTMKAC | 1 cut(s) | 465 |
| XspI | CTAG | 2 cut(s) | 356, 546 |
| Zsp2I | ATGCAT | 1 cut(s) | 585 |