Protein ROOT HAIR DEFECTIVE 3 homolog
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 396 |
| AccII | CGCG | 1 cut(s) | 510 |
| AccIII | TCCGGA | 1 cut(s) | 701 |
| AciI | CCGC | 3 cut(s) | 60, 105, 150 |
| AclWI | GGATC | 1 cut(s) | 605 |
| AcyI | GRCGYC | 1 cut(s) | 39 |
| AfaI | GTAC | 5 cut(s) | 116, 160, 298, 381, 576 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 135, 701 |
| AflII | CTTAAG | 1 cut(s) | 637 |
| AflIII | ACRYGT | 2 cut(s) | 390, 577 |
| AgsI | TTSAA | 1 cut(s) | 55 |
| AluBI | AGCT | 1 cut(s) | 31 |
| AluI | AGCT | 1 cut(s) | 31 |
| Alw21I | GWGCWC | 2 cut(s) | 352, 721 |
| Alw44I | GTGCAC | 1 cut(s) | 717 |
| AlwI | GGATC | 1 cut(s) | 605 |
| Aor13HI | TCCGGA | 1 cut(s) | 701 |
| AoxI | GGCC | 1 cut(s) | 137 |
| ApaLI | GTGCAC | 1 cut(s) | 717 |
| ApeKI | GCWGC | 2 cut(s) | 28, 422 |
| AspLEI | GCGC | 1 cut(s) | 468 |
| AspS9I | GGNCC | 2 cut(s) | 70, 137 |
| AsuC2I | CCSGG | 1 cut(s) | 64 |
| AsuHPI | GGTGA | 1 cut(s) | 686 |
| AvaII | GGWCC | 1 cut(s) | 70 |
| BaeGI | GKGCMC | 1 cut(s) | 721 |
| BanI | GGYRCC | 1 cut(s) | 396 |
| Bbv12I | GWGCWC | 2 cut(s) | 352, 721 |
| BbvI | GCAGC | 2 cut(s) | 40, 409 |
| BccI | CCATC | 2 cut(s) | 193, 296 |
| BceAI | ACGGC | 2 cut(s) | 61, 104 |
| BcnI | CCSGG | 1 cut(s) | 64 |
| BfmI | CTRYAG | 1 cut(s) | 276 |
| BfrI | CTTAAG | 1 cut(s) | 637 |
| BisI | GCNGC | 3 cut(s) | 29, 60, 423 |
| BlsI | GCNGC | 3 cut(s) | 30, 61, 424 |
| BmcAI | AGTACT | 1 cut(s) | 160 |
| Bme1390I | CCNGG | 1 cut(s) | 64 |
| Bme18I | GGWCC | 1 cut(s) | 70 |
| BmgT120I | GGNCC | 2 cut(s) | 70, 137 |
| BmiI | GGNNCC | 4 cut(s) | 138, 221, 398, 543 |
| BmrFI | CCNGG | 1 cut(s) | 64 |
| BmsI | GCATC | 2 cut(s) | 193, 453 |
| BpmI | CTGGAG | 1 cut(s) | 560 |
| BpuMI | CCSGG | 1 cut(s) | 64 |
| Bsa29I | ATCGAT | 1 cut(s) | 99 |
| BsaAI | YACGTR | 2 cut(s) | 482, 578 |
| BsaHI | GRCGYC | 1 cut(s) | 39 |
| BsaWI | WCCGGW | 1 cut(s) | 701 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 135, 701 |
| BseAI | TCCGGA | 1 cut(s) | 701 |
| BseCI | ATCGAT | 1 cut(s) | 99 |
| BseGI | GGATG | 2 cut(s) | 208, 328 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 135, 701 |
| BseMII | CTCAG | 1 cut(s) | 155 |
| BseSI | GKGCMC | 1 cut(s) | 721 |
| BseXI | GCAGC | 2 cut(s) | 40, 409 |
| Bsh1236I | CGCG | 1 cut(s) | 510 |
| BshFI | GGCC | 1 cut(s) | 139 |
| BshNI | GGYRCC | 1 cut(s) | 396 |
| BshVI | ATCGAT | 1 cut(s) | 99 |
| BsiHKAI | GWGCWC | 2 cut(s) | 352, 721 |
| BsiSI | CCGG | 2 cut(s) | 63, 702 |
| BsiWI | CGTACG | 1 cut(s) | 114 |
| BslFI | GGGAC | 1 cut(s) | 677 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 135, 701 |
| BsmFI | GGGAC | 1 cut(s) | 677 |
| BsnI | GGCC | 1 cut(s) | 139 |
| Bsp1286I | GDGCHC | 2 cut(s) | 352, 721 |
| Bsp13I | TCCGGA | 1 cut(s) | 701 |
| Bsp143I | GATC | 2 cut(s) | 33, 597 |
| BspACI | CCGC | 3 cut(s) | 60, 105, 150 |
| BspANI | GGCC | 1 cut(s) | 139 |
| BspCNI | CTCAG | 1 cut(s) | 154 |
| BspDI | ATCGAT | 1 cut(s) | 99 |
| BspEI | TCCGGA | 1 cut(s) | 701 |
| BspFNI | CGCG | 1 cut(s) | 510 |
| BspHI | TCATGA | 1 cut(s) | 652 |
| BspLI | GGNNCC | 4 cut(s) | 138, 221, 398, 543 |
| BspPI | GGATC | 1 cut(s) | 605 |
| BspT107I | GGYRCC | 1 cut(s) | 396 |
| BspTI | CTTAAG | 1 cut(s) | 637 |
| BssMI | GATC | 2 cut(s) | 33, 597 |
| BssNI | GRCGYC | 1 cut(s) | 39 |
| Bst4CI | ACNGT | 1 cut(s) | 448 |
| Bst6I | CTCTTC | 1 cut(s) | 149 |
| BstACI | GRCGYC | 1 cut(s) | 39 |
| BstAFI | CTTAAG | 1 cut(s) | 637 |
| BstBAI | YACGTR | 2 cut(s) | 482, 578 |
| BstC8I | GCNNGC | 3 cut(s) | 107, 420, 669 |
| BstDEI | CTNAG | 3 cut(s) | 141, 186, 249 |
| BstF5I | GGATG | 2 cut(s) | 208, 328 |
| BstFNI | CGCG | 1 cut(s) | 510 |
| BstHHI | GCGC | 1 cut(s) | 468 |
| BstKTI | GATC | 2 cut(s) | 36, 600 |
| BstMBI | GATC | 2 cut(s) | 33, 597 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 125, 279, 356, 474 |
| BstNSI | RCATGY | 2 cut(s) | 394, 771 |
| BstSCI | CCNGG | 1 cut(s) | 62 |
| BstSFI | CTRYAG | 1 cut(s) | 276 |
| BstSLI | GKGCMC | 1 cut(s) | 721 |
| BstUI | CGCG | 1 cut(s) | 510 |
| BstV1I | GCAGC | 2 cut(s) | 40, 409 |
| BstX2I | RGATCY | 1 cut(s) | 597 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 407 |
| BstYI | RGATCY | 1 cut(s) | 597 |
| Bsu15I | ATCGAT | 1 cut(s) | 99 |
| BsuRI | GGCC | 1 cut(s) | 139 |
| BsuTUI | ATCGAT | 1 cut(s) | 99 |
| BtsCI | GGATG | 2 cut(s) | 208, 328 |
| Cac8I | GCNNGC | 3 cut(s) | 107, 420, 669 |
| CciI | TCATGA | 1 cut(s) | 652 |
| CfoI | GCGC | 1 cut(s) | 468 |
| Cfr13I | GGNCC | 2 cut(s) | 70, 137 |
| ClaI | ATCGAT | 1 cut(s) | 99 |
| CseI | GACGC | 1 cut(s) | 47 |
| Csp6I | GTAC | 5 cut(s) | 115, 159, 297, 380, 575 |
| CviAII | CATG | 6 cut(s) | 283, 391, 401, 653, 746, 768 |
| CviQI | GTAC | 5 cut(s) | 115, 159, 297, 380, 575 |
| DdeI | CTNAG | 3 cut(s) | 141, 186, 249 |
| DpnI | GATC | 2 cut(s) | 35, 599 |
| DpnII | GATC | 2 cut(s) | 33, 597 |
| Eam1104I | CTCTTC | 1 cut(s) | 149 |
| EarI | CTCTTC | 1 cut(s) | 149 |
| Eco47I | GGWCC | 1 cut(s) | 70 |
| EcoO109I | RGGNCCY | 1 cut(s) | 137 |
| FaeI | CATG | 6 cut(s) | 286, 394, 404, 656, 749, 771 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 651, 683 |
| FaqI | GGGAC | 1 cut(s) | 677 |
| FatI | CATG | 6 cut(s) | 282, 390, 400, 652, 745, 767 |
| FauI | CCCGC | 2 cut(s) | 98, 143 |
| Fnu4HI | GCNGC | 3 cut(s) | 29, 60, 423 |
| FokI | GGATG | 2 cut(s) | 215, 335 |
| Fsp4HI | GCNGC | 3 cut(s) | 29, 60, 423 |
| GlaI | GCGC | 1 cut(s) | 467 |
| GluI | GCNGC | 3 cut(s) | 29, 60, 423 |
| GsuI | CTGGAG | 1 cut(s) | 560 |
| HaeIII | GGCC | 1 cut(s) | 139 |
| HapII | CCGG | 2 cut(s) | 63, 702 |
| HgaI | GACGC | 1 cut(s) | 47 |
| HhaI | GCGC | 1 cut(s) | 468 |
| Hin1I | GRCGYC | 1 cut(s) | 39 |
| Hin1II | CATG | 6 cut(s) | 286, 394, 404, 656, 749, 771 |
| Hin6I | GCGC | 1 cut(s) | 466 |
| HinP1I | GCGC | 1 cut(s) | 466 |
| HinfI | GANTC | 2 cut(s) | 75, 169 |
| HpaII | CCGG | 2 cut(s) | 63, 702 |
| HphI | GGTGA | 1 cut(s) | 686 |
| Hpy166II | GTNNAC | 2 cut(s) | 575, 719 |
| Hpy188I | TCNGA | 2 cut(s) | 144, 373 |
| Hpy188III | TCNNGA | 6 cut(s) | 79, 337, 413, 539, 653, 702 |
| Hpy8I | GTNNAC | 2 cut(s) | 575, 719 |
| Hpy99I | CGWCG | 4 cut(s) | 41, 47, 232, 493 |
| HpyAV | CCTTC | 4 cut(s) | 76, 85, 210, 226 |
| HpyCH4III | ACNGT | 1 cut(s) | 448 |
| HpyCH4IV | ACGT | 3 cut(s) | 481, 491, 577 |
| HpyCH4V | TGCA | 3 cut(s) | 273, 425, 719 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 125, 279, 356, 474 |
| HpyF3I | CTNAG | 3 cut(s) | 141, 186, 249 |
| HpySE526I | ACGT | 3 cut(s) | 481, 491, 577 |
| Hsp92I | GRCGYC | 1 cut(s) | 39 |
| Hsp92II | CATG | 6 cut(s) | 286, 394, 404, 656, 749, 771 |
| HspAI | GCGC | 1 cut(s) | 466 |
| Kpn2I | TCCGGA | 1 cut(s) | 701 |
| Kzo9I | GATC | 2 cut(s) | 33, 597 |
| LmnI | GCTCC | 3 cut(s) | 219, 415, 541 |
| Lsp1109I | GCAGC | 2 cut(s) | 40, 409 |
| LweI | GCATC | 2 cut(s) | 193, 453 |
| MaeII | ACGT | 3 cut(s) | 481, 491, 577 |
| MalI | GATC | 2 cut(s) | 35, 599 |
| MboI | GATC | 2 cut(s) | 33, 597 |
| MboII | GAAGA | 2 cut(s) | 166, 569 |
| MflI | RGATCY | 1 cut(s) | 597 |
| MhlI | GDGCHC | 2 cut(s) | 352, 721 |
| MnlI | CCTC | 8 cut(s) | 4, 79, 150, 286, 308, 313, 656, 709 |
| MroI | TCCGGA | 1 cut(s) | 701 |
| MseI | TTAA | 4 cut(s) | 387, 551, 605, 638 |
| MslI | CAYNNNNRTG | 1 cut(s) | 766 |
| MspA1I | CMGCKG | 1 cut(s) | 31 |
| MspCI | CTTAAG | 1 cut(s) | 637 |
| MspI | CCGG | 2 cut(s) | 63, 702 |
| MspR9I | CCNGG | 1 cut(s) | 64 |
| MvnI | CGCG | 1 cut(s) | 510 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 125, 279, 356, 474 |
| NciI | CCSGG | 1 cut(s) | 64 |
| NdeII | GATC | 2 cut(s) | 33, 597 |
| NlaIII | CATG | 6 cut(s) | 286, 394, 404, 656, 749, 771 |
| NlaIV | GGNNCC | 4 cut(s) | 138, 221, 398, 543 |
| NspI | RCATGY | 2 cut(s) | 394, 771 |
| PagI | TCATGA | 1 cut(s) | 652 |
| PciI | ACATGT | 1 cut(s) | 390 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 45 |
| PfeI | GAWTC | 2 cut(s) | 75, 169 |
| Pfl23II | CGTACG | 1 cut(s) | 114 |
| PkrI | GCNGC | 3 cut(s) | 30, 61, 424 |
| Ppu21I | YACGTR | 2 cut(s) | 482, 578 |
| PscI | ACATGT | 1 cut(s) | 390 |
| PspLI | CGTACG | 1 cut(s) | 114 |
| PspN4I | GGNNCC | 4 cut(s) | 138, 221, 398, 543 |
| PspPI | GGNCC | 2 cut(s) | 70, 137 |
| PsuI | RGATCY | 1 cut(s) | 597 |
| PvuII | CAGCTG | 1 cut(s) | 31 |
| RsaI | GTAC | 5 cut(s) | 116, 160, 298, 381, 576 |
| RsaNI | GTAC | 5 cut(s) | 115, 159, 297, 380, 575 |
| RseI | CAYNNNNRTG | 1 cut(s) | 766 |
| SaqAI | TTAA | 4 cut(s) | 387, 551, 605, 638 |
| SatI | GCNGC | 3 cut(s) | 29, 60, 423 |
| Sau3AI | GATC | 2 cut(s) | 33, 597 |
| Sau96I | GGNCC | 2 cut(s) | 70, 137 |
| ScaI | AGTACT | 1 cut(s) | 160 |
| ScrFI | CCNGG | 1 cut(s) | 64 |
| SduI | GDGCHC | 2 cut(s) | 352, 721 |
| SetI | ASST | 7 cut(s) | 33, 96, 436, 459, 484, 494, 580 |
| SfaNI | GCATC | 2 cut(s) | 193, 453 |
| SfcI | CTRYAG | 1 cut(s) | 276 |
| SinI | GGWCC | 1 cut(s) | 70 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 766 |
| SmlI | CTYRAG | 1 cut(s) | 637 |
| SmoI | CTYRAG | 1 cut(s) | 637 |
| SsiI | CCGC | 3 cut(s) | 60, 105, 150 |
| StyD4I | CCNGG | 1 cut(s) | 62 |
| TaaI | ACNGT | 1 cut(s) | 448 |
| TaiI | ACGT | 3 cut(s) | 484, 494, 580 |
| TaqI | TCGA | 3 cut(s) | 36, 99, 336 |
| TaqII | GACCGA | 1 cut(s) | 87 |
| TatI | WGTACW | 2 cut(s) | 158, 379 |
| TauI | GCSGC | 1 cut(s) | 62 |
| TfiI | GAWTC | 2 cut(s) | 75, 169 |
| Tru1I | TTAA | 4 cut(s) | 387, 551, 605, 638 |
| Tru9I | TTAA | 4 cut(s) | 387, 551, 605, 638 |
| TseI | GCWGC | 2 cut(s) | 28, 422 |
| TspDTI | ATGAA | 5 cut(s) | 170, 182, 641, 699, 734 |
| Vha464I | CTTAAG | 1 cut(s) | 637 |
| VneI | GTGCAC | 1 cut(s) | 717 |
| VpaK11BI | GGWCC | 1 cut(s) | 70 |
| XceI | RCATGY | 2 cut(s) | 394, 771 |
| ZrmI | AGTACT | 1 cut(s) | 160 |