Protein ROOT HAIR DEFECTIVE 3 homolog
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1178 |
| AccI | GTMKAC | 1 cut(s) | 1032 |
| AccII | CGCG | 1 cut(s) | 450 |
| AciI | CCGC | 3 cut(s) | 105, 925, 1127 |
| AclWI | GGATC | 3 cut(s) | 49, 772, 798 |
| AcsI | RAATTY | 1 cut(s) | 41 |
| AcuI | CTGAAG | 2 cut(s) | 654, 1188 |
| AfaI | GTAC | 3 cut(s) | 279, 367, 1170 |
| AfeI | AGCGCT | 1 cut(s) | 291 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 64, 110, 787 |
| AflIII | ACRYGT | 2 cut(s) | 274, 1165 |
| AjnI | CCWGG | 1 cut(s) | 940 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 26, 58, 580, 612 |
| AluBI | AGCT | 6 cut(s) | 89, 132, 425, 901, 986, 1154 |
| AluI | AGCT | 6 cut(s) | 89, 132, 425, 901, 986, 1154 |
| Alw21I | GWGCWC | 1 cut(s) | 1237 |
| Alw26I | GTCTC | 2 cut(s) | 1108, 1124 |
| AlwI | GGATC | 3 cut(s) | 49, 772, 798 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 410 |
| Aor51HI | AGCGCT | 1 cut(s) | 291 |
| AoxI | GGCC | 2 cut(s) | 100, 171 |
| ApeKI | GCWGC | 4 cut(s) | 5, 410, 917, 937 |
| ApoI | RAATTY | 1 cut(s) | 41 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 456, 957 |
| AspLEI | GCGC | 1 cut(s) | 292 |
| AspS9I | GGNCC | 2 cut(s) | 101, 557 |
| AvaII | GGWCC | 1 cut(s) | 557 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 358, 390 |
| BbsI | GAAGAC | 2 cut(s) | 799, 861 |
| Bbv12I | GWGCWC | 1 cut(s) | 1237 |
| BbvI | GCAGC | 3 cut(s) | 397, 904, 949 |
| BccI | CCATC | 3 cut(s) | 185, 929, 974 |
| BciT130I | CCWGG | 1 cut(s) | 942 |
| BcoDI | GTCTC | 2 cut(s) | 1108, 1124 |
| BfmI | CTRYAG | 2 cut(s) | 660, 1029 |
| BfoI | RGCGCY | 1 cut(s) | 293 |
| BisI | GCNGC | 4 cut(s) | 6, 411, 918, 938 |
| BlpI | GCTNAGC | 1 cut(s) | 128 |
| BlsI | GCNGC | 4 cut(s) | 7, 412, 919, 939 |
| Bme1390I | CCNGG | 1 cut(s) | 942 |
| Bme18I | GGWCC | 1 cut(s) | 557 |
| BmgT120I | GGNCC | 2 cut(s) | 101, 557 |
| BmiI | GGNNCC | 2 cut(s) | 103, 1024 |
| BmrFI | CCNGG | 1 cut(s) | 942 |
| BmsI | GCATC | 5 cut(s) | 397, 424, 463, 491, 868 |
| BpiI | GAAGAC | 2 cut(s) | 799, 861 |
| BpmI | CTGGAG | 1 cut(s) | 335 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 128 |
| BpuEI | CTTGAG | 4 cut(s) | 404, 712, 1030, 1134 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1014, 1044 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 64, 110, 787 |
| Bse1I | ACTGG | 6 cut(s) | 559, 560, 586, 850, 1091, 1102 |
| BseBI | CCWGG | 1 cut(s) | 942 |
| BseGI | GGATG | 7 cut(s) | 404, 439, 485, 883, 921, 937, 985 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 64, 110, 787 |
| BseMII | CTCAG | 2 cut(s) | 142, 1125 |
| BseNI | ACTGG | 6 cut(s) | 559, 560, 586, 850, 1091, 1102 |
| BseXI | GCAGC | 3 cut(s) | 397, 904, 949 |
| BsgI | GTGCAG | 2 cut(s) | 423, 1115 |
| Bsh1236I | CGCG | 1 cut(s) | 450 |
| BshFI | GGCC | 2 cut(s) | 102, 173 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1237 |
| BslFI | GGGAC | 1 cut(s) | 285 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 64, 110, 787 |
| BsmAI | GTCTC | 2 cut(s) | 1108, 1124 |
| BsmFI | GGGAC | 1 cut(s) | 285 |
| BsnI | GGCC | 2 cut(s) | 102, 173 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1237 |
| Bsp1407I | TGTACA | 1 cut(s) | 1168 |
| Bsp143I | GATC | 3 cut(s) | 54, 777, 790 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 128 |
| Bsp68I | TCGCGA | 1 cut(s) | 450 |
| BspACI | CCGC | 3 cut(s) | 105, 925, 1127 |
| BspANI | GGCC | 2 cut(s) | 102, 173 |
| BspCNI | CTCAG | 2 cut(s) | 141, 1126 |
| BspFNI | CGCG | 1 cut(s) | 450 |
| BspLI | GGNNCC | 2 cut(s) | 103, 1024 |
| BspPI | GGATC | 3 cut(s) | 49, 772, 798 |
| BsrGI | TGTACA | 1 cut(s) | 1168 |
| BsrI | ACTGG | 6 cut(s) | 559, 560, 586, 850, 1091, 1102 |
| BssMI | GATC | 3 cut(s) | 54, 777, 790 |
| Bst2UI | CCWGG | 1 cut(s) | 942 |
| Bst4CI | ACNGT | 5 cut(s) | 540, 661, 805, 994, 1119 |
| Bst6I | CTCTTC | 5 cut(s) | 18, 331, 379, 753, 1053 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 410, 695 |
| BstAUI | TGTACA | 1 cut(s) | 1168 |
| BstC8I | GCNNGC | 1 cut(s) | 883 |
| BstDEI | CTNAG | 2 cut(s) | 128, 1134 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 62 |
| BstF5I | GGATG | 7 cut(s) | 404, 439, 485, 883, 921, 937, 985 |
| BstFNI | CGCG | 1 cut(s) | 450 |
| BstH2I | RGCGCY | 1 cut(s) | 293 |
| BstHHI | GCGC | 1 cut(s) | 292 |
| BstKTI | GATC | 3 cut(s) | 57, 780, 793 |
| BstMAI | GTCTC | 2 cut(s) | 1108, 1124 |
| BstMBI | GATC | 3 cut(s) | 54, 777, 790 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 11, 410, 695, 887, 1160 |
| BstNI | CCWGG | 1 cut(s) | 942 |
| BstNSI | RCATGY | 3 cut(s) | 278, 482, 1169 |
| BstSCI | CCNGG | 1 cut(s) | 940 |
| BstSFI | CTRYAG | 2 cut(s) | 660, 1029 |
| BstUI | CGCG | 1 cut(s) | 450 |
| BstV1I | GCAGC | 3 cut(s) | 397, 904, 949 |
| BstV2I | GAAGAC | 2 cut(s) | 799, 861 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 928 |
| BsuRI | GGCC | 2 cut(s) | 102, 173 |
| BtsCI | GGATG | 7 cut(s) | 404, 439, 485, 883, 921, 937, 985 |
| BtsI | GCAGTG | 2 cut(s) | 1103, 1237 |
| BtsIMutI | CAGTG | 3 cut(s) | 1098, 1103, 1237 |
| BtuMI | TCGCGA | 1 cut(s) | 450 |
| Cac8I | GCNNGC | 1 cut(s) | 883 |
| CaiI | CAGNNNCTG | 1 cut(s) | 410 |
| CfoI | GCGC | 1 cut(s) | 292 |
| Cfr13I | GGNCC | 2 cut(s) | 101, 557 |
| CseI | GACGC | 2 cut(s) | 534, 879 |
| Csp6I | GTAC | 3 cut(s) | 278, 366, 1169 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 717, 752 |
| CviAII | CATG | 8 cut(s) | 259, 265, 275, 379, 479, 784, 913, 1166 |
| CviQI | GTAC | 3 cut(s) | 278, 366, 1169 |
| DdeI | CTNAG | 2 cut(s) | 128, 1134 |
| DpnI | GATC | 3 cut(s) | 56, 779, 792 |
| DpnII | GATC | 3 cut(s) | 54, 777, 790 |
| DraI | TTTAAA | 1 cut(s) | 304 |
| Eam1104I | CTCTTC | 5 cut(s) | 18, 331, 379, 753, 1053 |
| EarI | CTCTTC | 5 cut(s) | 18, 331, 379, 753, 1053 |
| Eco47I | GGWCC | 1 cut(s) | 557 |
| Eco47III | AGCGCT | 1 cut(s) | 291 |
| Eco57I | CTGAAG | 2 cut(s) | 654, 1188 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 62 |
| EcoRII | CCWGG | 1 cut(s) | 940 |
| EcoT22I | ATGCAT | 1 cut(s) | 484 |
| FaeI | CATG | 8 cut(s) | 262, 268, 278, 382, 482, 787, 916, 1169 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1064, 1096 |
| FaqI | GGGAC | 1 cut(s) | 285 |
| FatI | CATG | 8 cut(s) | 258, 264, 274, 378, 478, 783, 912, 1165 |
| FauI | CCCGC | 1 cut(s) | 112 |
| FauNDI | CATATG | 1 cut(s) | 352 |
| FblI | GTMKAC | 1 cut(s) | 1032 |
| Fnu4HI | GCNGC | 4 cut(s) | 6, 411, 918, 938 |
| FokI | GGATG | 7 cut(s) | 411, 446, 472, 890, 908, 944, 992 |
| Fsp4HI | GCNGC | 4 cut(s) | 6, 411, 918, 938 |
| GlaI | GCGC | 1 cut(s) | 291 |
| GluI | GCNGC | 4 cut(s) | 6, 411, 918, 938 |
| GsuI | CTGGAG | 1 cut(s) | 335 |
| HaeII | RGCGCY | 1 cut(s) | 293 |
| HaeIII | GGCC | 2 cut(s) | 102, 173 |
| HgaI | GACGC | 2 cut(s) | 534, 879 |
| HhaI | GCGC | 1 cut(s) | 292 |
| Hin1II | CATG | 8 cut(s) | 262, 268, 278, 382, 482, 787, 916, 1169 |
| Hin6I | GCGC | 1 cut(s) | 290 |
| HinP1I | GCGC | 1 cut(s) | 290 |
| HincII | GTYRAC | 1 cut(s) | 523 |
| HindII | GTYRAC | 1 cut(s) | 523 |
| HindIII | AAGCTT | 1 cut(s) | 899 |
| HinfI | GANTC | 3 cut(s) | 224, 568, 824 |
| Hpy166II | GTNNAC | 3 cut(s) | 247, 523, 1033 |
| Hpy188I | TCNGA | 3 cut(s) | 511, 649, 1022 |
| Hpy188III | TCNNGA | 4 cut(s) | 441, 449, 626, 1242 |
| Hpy8I | GTNNAC | 3 cut(s) | 247, 523, 1033 |
| HpyAV | CCTTC | 4 cut(s) | 185, 781, 868, 1248 |
| HpyCH4III | ACNGT | 5 cut(s) | 540, 661, 805, 994, 1119 |
| HpyCH4IV | ACGT | 3 cut(s) | 280, 463, 1195 |
| HpyCH4V | TGCA | 8 cut(s) | 197, 254, 404, 476, 482, 500, 709, 1096 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 11, 410, 695, 887, 1160 |
| HpyF3I | CTNAG | 2 cut(s) | 128, 1134 |
| HpySE526I | ACGT | 3 cut(s) | 280, 463, 1195 |
| Hsp92II | CATG | 8 cut(s) | 262, 268, 278, 382, 482, 787, 916, 1169 |
| HspAI | GCGC | 1 cut(s) | 290 |
| Kzo9I | GATC | 3 cut(s) | 54, 777, 790 |
| LmnI | GCTCC | 5 cut(s) | 137, 316, 983, 1022, 1240 |
| Lsp1109I | GCAGC | 3 cut(s) | 397, 904, 949 |
| LweI | GCATC | 5 cut(s) | 397, 424, 463, 491, 868 |
| MaeII | ACGT | 3 cut(s) | 280, 463, 1195 |
| MaeIII | GTNAC | 3 cut(s) | 637, 988, 1144 |
| MalI | GATC | 3 cut(s) | 56, 779, 792 |
| MboI | GATC | 3 cut(s) | 54, 777, 790 |
| MfeI | CAATTG | 3 cut(s) | 215, 693, 1051 |
| MhlI | GDGCHC | 1 cut(s) | 1237 |
| MlyI | GAGTC | 2 cut(s) | 233, 562 |
| MmeI | TCCRAC | 3 cut(s) | 201, 216, 660 |
| Mph1103I | ATGCAT | 1 cut(s) | 484 |
| MroXI | GAANNNNTTC | 2 cut(s) | 456, 957 |
| MseI | TTAA | 9 cut(s) | 140, 303, 326, 551, 621, 716, 1082, 1199, 1226 |
| MslI | CAYNNNNRTG | 1 cut(s) | 263 |
| MspR9I | CCNGG | 1 cut(s) | 942 |
| MunI | CAATTG | 3 cut(s) | 215, 693, 1051 |
| MvaI | CCWGG | 1 cut(s) | 942 |
| MvnI | CGCG | 1 cut(s) | 450 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 11, 410, 695, 887, 1160 |
| NdeI | CATATG | 1 cut(s) | 352 |
| NdeII | GATC | 3 cut(s) | 54, 777, 790 |
| NlaIII | CATG | 8 cut(s) | 262, 268, 278, 382, 482, 787, 916, 1169 |
| NlaIV | GGNNCC | 2 cut(s) | 103, 1024 |
| NmuCI | GTSAC | 1 cut(s) | 1144 |
| NruI | TCGCGA | 1 cut(s) | 450 |
| NsiI | ATGCAT | 1 cut(s) | 484 |
| NspI | RCATGY | 3 cut(s) | 278, 482, 1169 |
| PciI | ACATGT | 2 cut(s) | 274, 1165 |
| PdmI | GAANNNNTTC | 2 cut(s) | 456, 957 |
| PfeI | GAWTC | 1 cut(s) | 824 |
| PkrI | GCNGC | 4 cut(s) | 7, 412, 919, 939 |
| PleI | GAGTC | 2 cut(s) | 232, 562 |
| PpsI | GAGTC | 2 cut(s) | 232, 562 |
| PscI | ACATGT | 2 cut(s) | 274, 1165 |
| PsiI | TTATAA | 1 cut(s) | 1178 |
| Psp6I | CCWGG | 1 cut(s) | 940 |
| PspGI | CCWGG | 1 cut(s) | 940 |
| PspN4I | GGNNCC | 2 cut(s) | 103, 1024 |
| PspPI | GGNCC | 2 cut(s) | 101, 557 |
| PstNI | CAGNNNCTG | 1 cut(s) | 410 |
| RruI | TCGCGA | 1 cut(s) | 450 |
| RsaI | GTAC | 3 cut(s) | 279, 367, 1170 |
| RsaNI | GTAC | 3 cut(s) | 278, 366, 1169 |
| RseI | CAYNNNNRTG | 1 cut(s) | 263 |
| SaqAI | TTAA | 9 cut(s) | 140, 303, 326, 551, 621, 716, 1082, 1199, 1226 |
| SatI | GCNGC | 4 cut(s) | 6, 411, 918, 938 |
| Sau3AI | GATC | 3 cut(s) | 54, 777, 790 |
| Sau96I | GGNCC | 2 cut(s) | 101, 557 |
| SchI | GAGTC | 2 cut(s) | 233, 562 |
| ScrFI | CCNGG | 1 cut(s) | 942 |
| SduI | GDGCHC | 1 cut(s) | 1237 |
| SfaNI | GCATC | 5 cut(s) | 397, 424, 463, 491, 868 |
| SfcI | CTRYAG | 2 cut(s) | 660, 1029 |
| SinI | GGWCC | 1 cut(s) | 557 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 263 |
| SmlI | CTYRAG | 4 cut(s) | 383, 727, 1045, 1149 |
| SmoI | CTYRAG | 4 cut(s) | 383, 727, 1045, 1149 |
| SsiI | CCGC | 3 cut(s) | 105, 925, 1127 |
| StyD4I | CCNGG | 1 cut(s) | 940 |
| TaaI | ACNGT | 5 cut(s) | 540, 661, 805, 994, 1119 |
| TaiI | ACGT | 3 cut(s) | 283, 466, 1198 |
| TaqI | TCGA | 2 cut(s) | 60, 227 |
| TatI | WGTACW | 2 cut(s) | 365, 1168 |
| TfiI | GAWTC | 1 cut(s) | 824 |
| Tru1I | TTAA | 9 cut(s) | 140, 303, 326, 551, 621, 716, 1082, 1199, 1226 |
| Tru9I | TTAA | 9 cut(s) | 140, 303, 326, 551, 621, 716, 1082, 1199, 1226 |
| TscAI | CASTG | 3 cut(s) | 1098, 1103, 1237 |
| TseFI | GTSAC | 1 cut(s) | 1144 |
| TseI | GCWGC | 4 cut(s) | 5, 410, 917, 937 |
| Tsp45I | GTSAC | 1 cut(s) | 1144 |
| TspDTI | ATGAA | 6 cut(s) | 800, 911, 987, 1111, 1205, 1211 |
| TspGWI | ACGGA | 2 cut(s) | 478, 898 |
| TspRI | CASTG | 3 cut(s) | 1098, 1103, 1237 |
| VpaK11BI | GGWCC | 1 cut(s) | 557 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 62 |
| XapI | RAATTY | 1 cut(s) | 41 |
| XceI | RCATGY | 3 cut(s) | 278, 482, 1169 |
| XmiI | GTMKAC | 1 cut(s) | 1032 |
| XmnI | GAANNNNTTC | 2 cut(s) | 456, 957 |
| Zsp2I | ATGCAT | 1 cut(s) | 484 |