MD05G1257200.v1.1

Protein ROOT HAIR DEFECTIVE 3 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0000525
Physical Location & Seq
Forward (+)
38816968 .. 38825369
8402 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1257200.v1.1.491

Sequence Viewer

Length: 1242 bp
ATGGGTGTTGTCCCTGCGTCAGGATTTTCCTTTAGTGCACGACAGATTTGGAAAGTAATCAAAGAGAACAAGGACTTGGATCTTCCCGCTCACAAGGTTATGGTTGCTACGGTTCGGTGTGAAGAGATTGCCAACCAGAAATTCAAACAGTTGGTCCAGGATGAGAAAAAACTTTCTTTGTCTTTAAGCGGTCCTGTAGAGGCTCTACTGGAAACTGGTGCAAAAGACACCTGGGCTTCGATACGAAAACTACTTAATCGTGAGACCAAAGTTGCAGTATCGGAGTTCTCAACTGCAGTTGCCAATTTTGAGTTGGACAATGAAACGGTTGTCAAAATGAAGCAGCATTTGAAGGATTATGCAAGAAATTGGTTTGCCGCAGTCTTCAATTATGACAGCGATTCAATGCCTAGGGTTTGGACTGGGAACGAAGACATTAGAAGTATTACCAAGGATGCACGAACTGCGTCTCTGAAGCTTTTGTTGACCATGGCTGCCATTCGCTTGGATGAGAAGCCAGATAATATTGAAAATGTCCTAGTTTCTTCTCTGGTGGACAGGACTGTTACTGTTTCATCTTCACAAAATAGGAAACTAGGACCTCCTACAGATCCTCTTGCCTCAAGCTCTTGGGAAGAGGTTTCTTCAAAGGATACCTTAATTACCCCAGTACAGTGCAAGTCATTGTCAAGGCAGTTCAAAGCAGAGACTGAATATAGTGTCACTCAAGCTATTTCGGCACAGGAGGCTCACAAGCGGAGTAACAACTGGTTACCTCCTCCATGGGCTATAATGGCGATGATCGTTCTTGGTTTTAACGAATTTATGATGCTTTTAAAGAACCCTCTCTACCTCATGGTTCTATTTGTTGCATTTTTACTTTCAAAGGCCTTATGGGTACAGATGGACATTACAGGACAGTTCCAGCATGACGCTAGCGATGTAGTGGGAGCTGCAAGCTTCACGTGCTCAACTTTGGCAGAGAACTTTGGCAAAGTTATCTGTGGTACCCATGAGCTATTGTTGCGTGGGAATCAAACACCAGAAGCACAAAGGCGGCCAGTTTCTCTTTCTTCTCAGAGTTATAGAAGTGAAACACCTCAGCCAAATCCAGTAACAAGCTCATTCACGGAGTCCTCAGTGTCATCCAATATCTCGTCATCAGATACCGGCATGGAATACTCAAGCCCTCCTTTAAGACAAAGGCGAACGGCAAACGTTGAGGAAGTTGAATCTTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0012505 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RHD3

Protein Analysis

414

Amino Acids

45.93

Weight (kDa)

6.28

Isoelectric Point (pI)

41.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RHD3_GTPase PF05879 3 - 29 1.8e-07 Root hair defective 3 GTP-binding protein (RHD3) GTPase domain
Sey1_3HB PF20428 42 - 125 2.8e-12 Sey1 three-helix bundle domain
Sey1_3HB PF20428 122 - 304 3.2e-63 Sey1 three-helix bundle domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000525)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G45160
fragaria_vesca FvH4_3g11890
malus_domestica MD00G1023300.v1.1 MD00G1023500.v1.1 MD00G1046300.v1.1 MD00G1046400.v1.1 MD00G1047200.v1.1 MD05G1180600.v1.1 MD05G1256900.v1.1 MD05G1257200.v1.1 MD05G1257300.v1.1 MD05G1257400.v1.1 MD05G1257900.v1.1 MD05G1258000.v1.1 MD10G1213100.v1.1 MD10G1237400.v1.1
prunus_persica Prupe.4G106400_v2.0.a1 Prupe.4G106400_v2.0.a1 Prupe.4G106900_v2.0.a1 Prupe.4G113800_v2.0.a1 Prupe.4G113800_v2.0.a1 Prupe.4G113800_v2.0.a1 Prupe.I001700_v2.0.a1
pyrus_communis pycom05g23620 pycom05g23630 pycom05g23880 pycom05g24090 pycom05g24270 pycom10g19870
rosa_chinensis RchiOBHm_Chr5g0019311 RchiOBHm_Chr5g0019391 RchiOBHm_Chr5g0019401 RchiOBHm_Chr7g0226131 RchiOBHm_Chr7g0226141 RchiOBHm_Chr7g0226161
rosa_laevigata RLG00000001766 RLG00000001767 RLG00000032437 RLG00000032441 RLG00000032445
rosa_multiflora Rmu_sc0001350.1_g000022 Rmu_sc0001350.1_g000031 Rmu_sc0002141.1_g000028 Rmu_sc0002759.1_g000037 Rmu_sc0002759.1_g000039 Rmu_sc0005292.1_g000004 Rmu_sc0005292.1_g000050
rosa_roxburghii Rroxscaffold_1G00058650 Rroxscaffold_1G00058670 Rroxscaffold_1G00074270 Rroxscaffold_2G00108890 Rroxscaffold_2G00125570
rosa_rugosa Rorug05G0050100 Rorug05G0050200 Rorug05G0050300 Rorug05G0050500 Rorug05G0050600 Rorug05G0050700
rosa_samantha Rh5AG140700 Rh5AG141000 Rh5AG141300 Rh5AG390000 Rh5BG139700 Rh5BG139800 Rh5BG139900 Rh5BG140000 Rh5CG151000 Rh5CG151500 Rh5CG151600 Rh5DG140200 Rh5DG140400 Rh5DG140600 Rh7AG368100 Rh7AG381400 Rh7AG381700 Rh7CG386400 Rh7CG400900 Rh7CG401200 Rh7DG380400 Rh7DG380500
rosa_wichuraiana Rw5G012510 Rw5G012530 Rw5G012540 Rw7G031980 Rw7G031990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1007
AccB1I GGYRCC 1 cut(s) 1007
AccBSI CCGCTC 1 cut(s) 89
AciI CCGC 5 cut(s) 87, 189, 378, 757, 1057
AclI AACGTT 1 cut(s) 1218
AclWI GGATC 2 cut(s) 87, 605
AcoI YGGCCR 1 cut(s) 1058
AcsI RAATTY 2 cut(s) 140, 821
AcuI CTGAAG 1 cut(s) 494
AcvI CACGTG 1 cut(s) 966
AfaI GTAC 3 cut(s) 672, 900, 1009
AfiI CCNNNNNNNGG 1 cut(s) 20
AgsI TTSAA 9 cut(s) 145, 352, 388, 405, 530, 648, 700, 885, 1232
AjnI CCWGG 2 cut(s) 156, 230
AjuI GAANNNNNNNTTGG 4 cut(s) 59, 91, 125, 157
AluBI AGCT 7 cut(s) 478, 627, 731, 953, 960, 1018, 1122
AluI AGCT 7 cut(s) 478, 627, 731, 953, 960, 1018, 1122
Alw21I GWGCWC 2 cut(s) 40, 971
Alw26I GTCTC 3 cut(s) 257, 474, 701
Alw44I GTGCAC 1 cut(s) 36
AlwI GGATC 2 cut(s) 87, 605
AlwNI CAGNNNCTG 1 cut(s) 710
AoxI GGCC 2 cut(s) 888, 1058
ApaLI GTGCAC 1 cut(s) 36
ApeKI GCWGC 3 cut(s) 343, 494, 953
ApoI RAATTY 2 cut(s) 140, 821
ArsI GACNNNNNNTTYG 2 cut(s) 138, 170
Asp718I GGTACC 1 cut(s) 1007
AspA2I CCTAGG 1 cut(s) 410
AspS9I GGNCC 3 cut(s) 154, 191, 599
AsuNHI GCTAGC 1 cut(s) 935
AvaII GGWCC 3 cut(s) 154, 191, 599
AvrII CCTAGG 1 cut(s) 410
BaeGI GKGCMC 1 cut(s) 40
BanI GGYRCC 1 cut(s) 1007
BbrPI CACGTG 1 cut(s) 966
BbsI GAAGAC 2 cut(s) 376, 438
Bbv12I GWGCWC 2 cut(s) 40, 971
BbvCI CCTCAGC 1 cut(s) 1101
BbvI GCAGC 3 cut(s) 355, 481, 940
BccI CCATC 1 cut(s) 898
BceAI ACGGC 1 cut(s) 1227
BciT130I CCWGG 2 cut(s) 158, 232
BciVI GTATCC 1 cut(s) 646
BcoDI GTCTC 3 cut(s) 257, 474, 701
BfaI CTAG 4 cut(s) 411, 539, 596, 936
BfmI CTRYAG 3 cut(s) 195, 294, 606
BfuI GTATCC 1 cut(s) 646
BisI GCNGC 5 cut(s) 344, 378, 495, 954, 1058
BlnI CCTAGG 1 cut(s) 410
BlsI GCNGC 5 cut(s) 345, 379, 496, 955, 1059
Bme1390I CCNGG 2 cut(s) 158, 232
Bme18I GGWCC 3 cut(s) 154, 191, 599
BmgT120I GGNCC 3 cut(s) 154, 191, 599
BmiI GGNNCC 1 cut(s) 1009
BmrFI CCNGG 2 cut(s) 158, 232
BmrI ACTGGG 2 cut(s) 432, 662
BmsI GCATC 2 cut(s) 445, 819
BmtI GCTAGC 1 cut(s) 939
BmuI ACTGGG 2 cut(s) 432, 662
BpiI GAAGAC 2 cut(s) 376, 438
Bpu10I CCTNAGC 1 cut(s) 1101
BpuEI CTTGAG 3 cut(s) 607, 711, 1168
BsaAI YACGTR 1 cut(s) 966
BsaI GGTCTC 1 cut(s) 257
BsaJI CCNNGG 5 cut(s) 231, 410, 450, 489, 782
Bsc4I CCNNNNNNNGG 1 cut(s) 20
Bse118I RCCGGY 1 cut(s) 1169
Bse1I ACTGG 7 cut(s) 213, 220, 427, 668, 773, 1061, 1112
BseBI CCWGG 2 cut(s) 158, 232
BseDI CCNNGG 5 cut(s) 231, 410, 450, 489, 782
BseGI GGATG 4 cut(s) 166, 460, 514, 1145
BseLI CCNNNNNNNGG 1 cut(s) 20
BseMII CTCAG 3 cut(s) 1091, 1115, 1152
BseNI ACTGG 7 cut(s) 213, 220, 427, 668, 773, 1061, 1112
BseRI GAGGAG 1 cut(s) 768
BseSI GKGCMC 1 cut(s) 40
BseXI GCAGC 3 cut(s) 355, 481, 940
BshFI GGCC 2 cut(s) 890, 1060
BshNI GGYRCC 1 cut(s) 1007
BsiHKAI GWGCWC 2 cut(s) 40, 971
BsiSI CCGG 1 cut(s) 1170
BslI CCNNNNNNNGG 1 cut(s) 20
BsmAI GTCTC 3 cut(s) 257, 474, 701
BsmBI CGTCTC 1 cut(s) 474
BsnI GGCC 2 cut(s) 890, 1060
Bso31I GGTCTC 1 cut(s) 257
Bsp1286I GDGCHC 2 cut(s) 40, 971
Bsp143I GATC 3 cut(s) 79, 610, 801
Bsp19I CCATGG 2 cut(s) 489, 782
BspACI CCGC 5 cut(s) 87, 189, 378, 757, 1057
BspANI GGCC 2 cut(s) 890, 1060
BspCNI CTCAG 3 cut(s) 1090, 1114, 1151
BspHI TCATGA 1 cut(s) 1238
BspLI GGNNCC 1 cut(s) 1009
BspMAI CTGCAG 1 cut(s) 298
BspOI GCTAGC 1 cut(s) 939
BspPI GGATC 2 cut(s) 87, 605
BspT107I GGYRCC 1 cut(s) 1007
BspTNI GGTCTC 1 cut(s) 257
BsrBI CCGCTC 1 cut(s) 89
BsrFI RCCGGY 1 cut(s) 1169
BsrI ACTGG 7 cut(s) 213, 220, 427, 668, 773, 1061, 1112
BssAI RCCGGY 1 cut(s) 1169
BssECI CCNNGG 5 cut(s) 231, 410, 450, 489, 782
BssMI GATC 3 cut(s) 79, 610, 801
BssT1I CCWWGG 4 cut(s) 410, 450, 489, 782
Bst2UI CCWGG 2 cut(s) 158, 232
Bst4CI ACNGT 7 cut(s) 112, 150, 328, 565, 571, 675, 921
Bst6I CTCTTC 2 cut(s) 117, 630
BstAPI GCANNNNNTGC 1 cut(s) 464
BstBAI YACGTR 1 cut(s) 966
BstC8I GCNNGC 2 cut(s) 937, 958
BstDEI CTNAG 3 cut(s) 1077, 1101, 1138
BstDSI CCRYGG 2 cut(s) 489, 782
BstEII GGTNACC 1 cut(s) 771
BstENI CCTNNNNNAGG 1 cut(s) 18
BstF5I GGATG 4 cut(s) 166, 460, 514, 1145
BstKTI GATC 3 cut(s) 82, 613, 804
BstMAI GTCTC 3 cut(s) 257, 474, 701
BstMBI GATC 3 cut(s) 79, 610, 801
BstMWI GCNNNNNNNGC 6 cut(s) 464, 737, 746, 794, 966, 1024
BstNI CCWGG 2 cut(s) 158, 232
BstPI GGTNACC 1 cut(s) 771
BstSCI CCNGG 2 cut(s) 156, 230
BstSFI CTRYAG 3 cut(s) 195, 294, 606
BstSLI GKGCMC 1 cut(s) 40
BstV1I GCAGC 3 cut(s) 355, 481, 940
BstV2I GAAGAC 2 cut(s) 376, 438
BstX2I RGATCY 2 cut(s) 79, 610
BstXI CCANNNNNNTGG 1 cut(s) 505
BstYI RGATCY 2 cut(s) 79, 610
BsuI GTATCC 1 cut(s) 646
BsuRI GGCC 2 cut(s) 890, 1060
BtgI CCRYGG 2 cut(s) 489, 782
BtgZI GCGATG 2 cut(s) 812, 954
BtsCI GGATG 4 cut(s) 166, 460, 514, 1145
BtsIMutI CAGTG 2 cut(s) 680, 1146
Cac8I GCNNGC 2 cut(s) 937, 958
CaiI CAGNNNCTG 1 cut(s) 710
CciI TCATGA 1 cut(s) 1238
Cfr10I RCCGGY 1 cut(s) 1169
Cfr13I GGNCC 3 cut(s) 154, 191, 599
CseI GACGC 3 cut(s) 6, 456, 941
Csp6I GTAC 3 cut(s) 671, 899, 1008
CviAII CATG 7 cut(s) 490, 783, 856, 929, 1013, 1174, 1239
CviQI GTAC 3 cut(s) 671, 899, 1008
DdeI CTNAG 3 cut(s) 1077, 1101, 1138
DpnI GATC 3 cut(s) 81, 612, 803
DpnII GATC 3 cut(s) 79, 610, 801
DraI TTTAAA 1 cut(s) 837
EaeI YGGCCR 1 cut(s) 1058
Eam1104I CTCTTC 2 cut(s) 117, 630
EarI CTCTTC 2 cut(s) 117, 630
Eco130I CCWWGG 4 cut(s) 410, 450, 489, 782
Eco147I AGGCCT 1 cut(s) 890
Eco31I GGTCTC 1 cut(s) 257
Eco47I GGWCC 3 cut(s) 154, 191, 599
Eco57I CTGAAG 1 cut(s) 494
Eco72I CACGTG 1 cut(s) 966
Eco91I GGTNACC 1 cut(s) 771
EcoNI CCTNNNNNAGG 1 cut(s) 18
EcoO109I RGGNCCY 1 cut(s) 599
EcoO65I GGTNACC 1 cut(s) 771
EcoRII CCWGG 2 cut(s) 156, 230
EcoT14I CCWWGG 4 cut(s) 410, 450, 489, 782
ErhI CCWWGG 4 cut(s) 410, 450, 489, 782
Esp3I CGTCTC 1 cut(s) 474
FaeI CATG 7 cut(s) 493, 786, 859, 932, 1016, 1177, 1242
FalI AAGNNNNNCTT 4 cut(s) 641, 673, 1177, 1209
FatI CATG 7 cut(s) 489, 782, 855, 928, 1012, 1173, 1238
FauI CCCGC 1 cut(s) 94
Fnu4HI GCNGC 5 cut(s) 344, 378, 495, 954, 1058
FokI GGATG 4 cut(s) 173, 467, 521, 1132
Fsp4HI GCNGC 5 cut(s) 344, 378, 495, 954, 1058
FspBI CTAG 4 cut(s) 411, 539, 596, 936
GluI GCNGC 5 cut(s) 344, 378, 495, 954, 1058
HaeIII GGCC 2 cut(s) 890, 1060
HapII CCGG 1 cut(s) 1170
HgaI GACGC 3 cut(s) 6, 456, 941
Hin1II CATG 7 cut(s) 493, 786, 859, 932, 1016, 1177, 1242
HincII GTYRAC 1 cut(s) 486
HindII GTYRAC 1 cut(s) 486
HindIII AAGCTT 2 cut(s) 476, 958
HinfI GANTC 4 cut(s) 401, 1033, 1133, 1232
HpaII CCGG 1 cut(s) 1170
Hpy166II GTNNAC 3 cut(s) 38, 486, 556
Hpy188I TCNGA 4 cut(s) 283, 474, 1080, 1165
Hpy188III TCNNGA 3 cut(s) 21, 260, 1239
Hpy8I GTNNAC 3 cut(s) 38, 486, 556
HpyAV CCTTC 1 cut(s) 346
HpyCH4III ACNGT 7 cut(s) 112, 150, 328, 565, 571, 675, 921
HpyCH4IV ACGT 2 cut(s) 965, 1218
HpyCH4V TGCA 9 cut(s) 38, 221, 275, 296, 362, 458, 678, 872, 956
HpyF10VI GCNNNNNNNGC 6 cut(s) 464, 737, 746, 794, 966, 1024
HpyF3I CTNAG 3 cut(s) 1077, 1101, 1138
HpySE526I ACGT 2 cut(s) 965, 1218
Hsp92II CATG 7 cut(s) 493, 786, 859, 932, 1016, 1177, 1242
KpnI GGTACC 1 cut(s) 1011
Kzo9I GATC 3 cut(s) 79, 610, 801
LmnI GCTCC 1 cut(s) 950
Lsp1109I GCAGC 3 cut(s) 355, 481, 940
LweI GCATC 2 cut(s) 445, 819
MaeI CTAG 4 cut(s) 411, 539, 596, 936
MaeII ACGT 2 cut(s) 965, 1218
MaeIII GTNAC 5 cut(s) 565, 721, 761, 771, 1114
MalI GATC 3 cut(s) 81, 612, 803
MbiI CCGCTC 1 cut(s) 89
MboI GATC 3 cut(s) 79, 610, 801
MflI RGATCY 2 cut(s) 79, 610
MhlI GDGCHC 2 cut(s) 40, 971
MluCI AATT 6 cut(s) 140, 304, 367, 388, 660, 821
MlyI GAGTC 1 cut(s) 1142
MmeI TCCRAC 1 cut(s) 294
MseI TTAA 6 cut(s) 185, 255, 659, 816, 836, 1196
MspI CCGG 1 cut(s) 1170
MspR9I CCNGG 2 cut(s) 158, 232
MvaI CCWGG 2 cut(s) 158, 232
MwoI GCNNNNNNNGC 6 cut(s) 464, 737, 746, 794, 966, 1024
NcoI CCATGG 2 cut(s) 489, 782
NdeII GATC 3 cut(s) 79, 610, 801
NheI GCTAGC 1 cut(s) 935
NlaIII CATG 7 cut(s) 493, 786, 859, 932, 1016, 1177, 1242
NlaIV GGNNCC 1 cut(s) 1009
NmuCI GTSAC 1 cut(s) 721
PagI TCATGA 1 cut(s) 1238
PceI AGGCCT 1 cut(s) 890
PfeI GAWTC 3 cut(s) 401, 1033, 1232
PfoI TCCNGGA 1 cut(s) 156
PkrI GCNGC 5 cut(s) 345, 379, 496, 955, 1059
PleI GAGTC 1 cut(s) 1141
PmaCI CACGTG 1 cut(s) 966
PmlI CACGTG 1 cut(s) 966
PpsI GAGTC 1 cut(s) 1141
Ppu21I YACGTR 1 cut(s) 966
PpuMI RGGWCCY 1 cut(s) 599
Psp1406I AACGTT 1 cut(s) 1218
Psp5II RGGWCCY 1 cut(s) 599
Psp6I CCWGG 2 cut(s) 156, 230
PspCI CACGTG 1 cut(s) 966
PspEI GGTNACC 1 cut(s) 771
PspGI CCWGG 2 cut(s) 156, 230
PspN4I GGNNCC 1 cut(s) 1009
PspPI GGNCC 3 cut(s) 154, 191, 599
PspPPI RGGWCCY 1 cut(s) 599
PsrI GAACNNNNNNTAC 2 cut(s) 833, 865
PstI CTGCAG 1 cut(s) 298
PstNI CAGNNNCTG 1 cut(s) 710
PsuI RGATCY 2 cut(s) 79, 610
RsaI GTAC 3 cut(s) 672, 900, 1009
RsaNI GTAC 3 cut(s) 671, 899, 1008
SaqAI TTAA 6 cut(s) 185, 255, 659, 816, 836, 1196
SatI GCNGC 5 cut(s) 344, 378, 495, 954, 1058
Sau3AI GATC 3 cut(s) 79, 610, 801
Sau96I GGNCC 3 cut(s) 154, 191, 599
SchI GAGTC 1 cut(s) 1142
ScrFI CCNGG 2 cut(s) 158, 232
SduI GDGCHC 2 cut(s) 40, 971
SfaNI GCATC 2 cut(s) 445, 819
SfcI CTRYAG 3 cut(s) 195, 294, 606
SinI GGWCC 3 cut(s) 154, 191, 599
SmlI CTYRAG 3 cut(s) 622, 726, 1183
SmoI CTYRAG 3 cut(s) 622, 726, 1183
Sse9I AATT 6 cut(s) 140, 304, 367, 388, 660, 821
SseBI AGGCCT 1 cut(s) 890
SsiI CCGC 5 cut(s) 87, 189, 378, 757, 1057
SspI AATATT 1 cut(s) 526
SspMI CTAG 4 cut(s) 411, 539, 596, 936
StuI AGGCCT 1 cut(s) 890
StyD4I CCNGG 2 cut(s) 156, 230
StyI CCWWGG 4 cut(s) 410, 450, 489, 782
TaaI ACNGT 7 cut(s) 112, 150, 328, 565, 571, 675, 921
TaiI ACGT 2 cut(s) 968, 1221
TaqI TCGA 1 cut(s) 239
TasI AATT 6 cut(s) 140, 304, 367, 388, 660, 821
TatI WGTACW 1 cut(s) 670
TauI GCSGC 2 cut(s) 380, 1060
TfiI GAWTC 3 cut(s) 401, 1033, 1232
Tru1I TTAA 6 cut(s) 185, 255, 659, 816, 836, 1196
Tru9I TTAA 6 cut(s) 185, 255, 659, 816, 836, 1196
TscAI CASTG 2 cut(s) 680, 1146
TseFI GTSAC 1 cut(s) 721
TseI GCWGC 3 cut(s) 343, 494, 953
Tsp45I GTSAC 1 cut(s) 721
TspDTI ATGAA 4 cut(s) 336, 353, 564, 1227
TspGWI ACGGA 1 cut(s) 1145
TspRI CASTG 2 cut(s) 680, 1146
VneI GTGCAC 1 cut(s) 36
VpaK11BI GGWCC 3 cut(s) 154, 191, 599
XagI CCTNNNNNAGG 1 cut(s) 18
XapI RAATTY 2 cut(s) 140, 821
XcmI CCANNNNNNNNNTGG 1 cut(s) 310
XmaJI CCTAGG 1 cut(s) 410
XspI CTAG 4 cut(s) 411, 539, 596, 936
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.