Protein ROOT HAIR DEFECTIVE 3 homolog
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 842 |
| AciI | CCGC | 5 cut(s) | 489, 735, 1094, 1114, 1402 |
| AclI | AACGTT | 1 cut(s) | 1563 |
| AclWI | GGATC | 3 cut(s) | 706, 732, 962 |
| AcoI | YGGCCR | 2 cut(s) | 195, 1403 |
| AcsI | RAATTY | 3 cut(s) | 70, 451, 1178 |
| AcuI | CTGAAG | 1 cut(s) | 851 |
| AfaI | GTAC | 4 cut(s) | 5, 191, 1029, 1257 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 93, 721 |
| AjiI | CACGTC | 1 cut(s) | 398 |
| AjnI | CCWGG | 1 cut(s) | 530 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 55, 87, 1399, 1431 |
| AluBI | AGCT | 7 cut(s) | 359, 391, 835, 984, 1088, 1370, 1467 |
| AluI | AGCT | 7 cut(s) | 359, 391, 835, 984, 1088, 1370, 1467 |
| Alw21I | GWGCWC | 1 cut(s) | 304 |
| Alw26I | GTCTC | 4 cut(s) | 557, 671, 831, 1058 |
| AlwI | GGATC | 3 cut(s) | 706, 732, 962 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 344 |
| AoxI | GGCC | 4 cut(s) | 108, 195, 1245, 1403 |
| ApeKI | GCWGC | 3 cut(s) | 344, 643, 851 |
| ApoI | RAATTY | 3 cut(s) | 70, 451, 1178 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 68, 100, 1062, 1094 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 234, 390 |
| AspA2I | CCTAGG | 1 cut(s) | 767 |
| AspLEI | GCGC | 1 cut(s) | 1292 |
| AspS9I | GGNCC | 3 cut(s) | 84, 491, 956 |
| AsuC2I | CCSGG | 2 cut(s) | 383, 1475 |
| AvaII | GGWCC | 3 cut(s) | 84, 491, 956 |
| AvrII | CCTAGG | 1 cut(s) | 767 |
| BalI | TGGCCA | 1 cut(s) | 197 |
| BbsI | GAAGAC | 1 cut(s) | 300 |
| Bbv12I | GWGCWC | 1 cut(s) | 304 |
| BbvCI | CCTCAGC | 1 cut(s) | 1446 |
| BbvI | GCAGC | 3 cut(s) | 331, 655, 838 |
| BccI | CCATC | 1 cut(s) | 1255 |
| BceAI | ACGGC | 1 cut(s) | 1572 |
| BciT130I | CCWGG | 1 cut(s) | 532 |
| BciVI | GTATCC | 1 cut(s) | 1003 |
| BcnI | CCSGG | 2 cut(s) | 383, 1475 |
| BcoDI | GTCTC | 4 cut(s) | 557, 671, 831, 1058 |
| BfaI | CTAG | 2 cut(s) | 768, 953 |
| BfmI | CTRYAG | 3 cut(s) | 495, 594, 963 |
| BfoI | RGCGCY | 1 cut(s) | 1293 |
| BfuI | GTATCC | 1 cut(s) | 1003 |
| BisI | GCNGC | 6 cut(s) | 345, 644, 735, 852, 1095, 1403 |
| BlnI | CCTAGG | 1 cut(s) | 767 |
| BlsI | GCNGC | 6 cut(s) | 346, 645, 736, 853, 1096, 1404 |
| Bme1390I | CCNGG | 3 cut(s) | 383, 532, 1475 |
| Bme18I | GGWCC | 3 cut(s) | 84, 491, 956 |
| BmgBI | CACGTC | 1 cut(s) | 398 |
| BmgT120I | GGNCC | 3 cut(s) | 84, 491, 956 |
| BmrFI | CCNGG | 3 cut(s) | 383, 532, 1475 |
| BmrI | ACTGGG | 2 cut(s) | 789, 1019 |
| BmsI | GCATC | 6 cut(s) | 331, 358, 397, 425, 802, 1176 |
| BmuI | ACTGGG | 2 cut(s) | 789, 1019 |
| BpiI | GAAGAC | 1 cut(s) | 300 |
| BpmI | CTGGAG | 1 cut(s) | 269 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1371, 1446 |
| BpuEI | CTTGAG | 4 cut(s) | 338, 964, 1068, 1513 |
| BpuMI | CCSGG | 2 cut(s) | 383, 1475 |
| BsaI | GGTCTC | 2 cut(s) | 557, 1058 |
| BsaJI | CCNNGG | 5 cut(s) | 531, 767, 807, 846, 1139 |
| BsaWI | WCCGGW | 1 cut(s) | 1387 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 93, 721 |
| Bse118I | RCCGGY | 1 cut(s) | 1514 |
| Bse1I | ACTGG | 6 cut(s) | 444, 513, 520, 784, 1025, 1130 |
| BseBI | CCWGG | 1 cut(s) | 532 |
| BseDI | CCNNGG | 5 cut(s) | 531, 767, 807, 846, 1139 |
| BseGI | GGATG | 5 cut(s) | 338, 373, 817, 871, 1490 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 93, 721 |
| BseMII | CTCAG | 5 cut(s) | 317, 1385, 1436, 1460, 1497 |
| BseNI | ACTGG | 6 cut(s) | 444, 513, 520, 784, 1025, 1130 |
| BseRI | GAGGAG | 1 cut(s) | 1125 |
| BseXI | GCAGC | 3 cut(s) | 331, 655, 838 |
| BseYI | CCCAGC | 1 cut(s) | 698 |
| BsgI | GTGCAG | 1 cut(s) | 357 |
| BshFI | GGCC | 4 cut(s) | 110, 197, 1247, 1405 |
| BsiHKAI | GWGCWC | 1 cut(s) | 304 |
| BsiSI | CCGG | 4 cut(s) | 382, 1388, 1475, 1515 |
| BslFI | GGGAC | 2 cut(s) | 931, 1287 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 93, 721 |
| BsmAI | GTCTC | 4 cut(s) | 557, 671, 831, 1058 |
| BsmBI | CGTCTC | 1 cut(s) | 831 |
| BsmFI | GGGAC | 2 cut(s) | 931, 1287 |
| BsnI | GGCC | 4 cut(s) | 110, 197, 1247, 1405 |
| Bso31I | GGTCTC | 2 cut(s) | 557, 1058 |
| Bsp1286I | GDGCHC | 1 cut(s) | 304 |
| Bsp1407I | TGTACA | 1 cut(s) | 3 |
| Bsp143I | GATC | 4 cut(s) | 711, 724, 967, 1158 |
| Bsp19I | CCATGG | 2 cut(s) | 846, 1139 |
| BspACI | CCGC | 5 cut(s) | 489, 735, 1094, 1114, 1402 |
| BspANI | GGCC | 4 cut(s) | 110, 197, 1247, 1405 |
| BspCNI | CTCAG | 5 cut(s) | 316, 1384, 1435, 1459, 1496 |
| BspHI | TCATGA | 2 cut(s) | 1338, 1583 |
| BspMAI | CTGCAG | 1 cut(s) | 598 |
| BspPI | GGATC | 3 cut(s) | 706, 732, 962 |
| BspTNI | GGTCTC | 2 cut(s) | 557, 1058 |
| BsrFI | RCCGGY | 1 cut(s) | 1514 |
| BsrGI | TGTACA | 1 cut(s) | 3 |
| BsrI | ACTGG | 6 cut(s) | 444, 513, 520, 784, 1025, 1130 |
| BssAI | RCCGGY | 1 cut(s) | 1514 |
| BssECI | CCNNGG | 5 cut(s) | 531, 767, 807, 846, 1139 |
| BssMI | GATC | 4 cut(s) | 711, 724, 967, 1158 |
| BssT1I | CCWWGG | 4 cut(s) | 767, 807, 846, 1139 |
| Bst2UI | CCWGG | 1 cut(s) | 532 |
| Bst6I | CTCTTC | 3 cut(s) | 47, 687, 987 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 344, 821 |
| BstAUI | TGTACA | 1 cut(s) | 3 |
| BstDEI | CTNAG | 6 cut(s) | 303, 1349, 1371, 1422, 1446, 1483 |
| BstDSI | CCRYGG | 2 cut(s) | 846, 1139 |
| BstEII | GGTNACC | 1 cut(s) | 1128 |
| BstF5I | GGATG | 5 cut(s) | 338, 373, 817, 871, 1490 |
| BstH2I | RGCGCY | 1 cut(s) | 1293 |
| BstHHI | GCGC | 1 cut(s) | 1292 |
| BstKTI | GATC | 4 cut(s) | 714, 727, 970, 1161 |
| BstMAI | GTCTC | 4 cut(s) | 557, 671, 831, 1058 |
| BstMBI | GATC | 4 cut(s) | 711, 724, 967, 1158 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 194, 344, 440, 821, 1094, 1103, 1151, 1367 |
| BstNI | CCWGG | 1 cut(s) | 532 |
| BstNSI | RCATGY | 1 cut(s) | 416 |
| BstPI | GGTNACC | 1 cut(s) | 1128 |
| BstSCI | CCNGG | 3 cut(s) | 381, 530, 1473 |
| BstSFI | CTRYAG | 3 cut(s) | 495, 594, 963 |
| BstV1I | GCAGC | 3 cut(s) | 331, 655, 838 |
| BstV2I | GAAGAC | 1 cut(s) | 300 |
| BstX2I | RGATCY | 1 cut(s) | 967 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 862 |
| BstYI | RGATCY | 1 cut(s) | 967 |
| BsuI | GTATCC | 1 cut(s) | 1003 |
| BsuRI | GGCC | 4 cut(s) | 110, 197, 1247, 1405 |
| BtgI | CCRYGG | 2 cut(s) | 846, 1139 |
| BtgZI | GCGATG | 1 cut(s) | 1169 |
| BtrI | CACGTC | 1 cut(s) | 398 |
| BtsCI | GGATG | 5 cut(s) | 338, 373, 817, 871, 1490 |
| BtsI | GCAGTG | 1 cut(s) | 744 |
| BtsIMutI | CAGTG | 3 cut(s) | 744, 1037, 1491 |
| CaiI | CAGNNNCTG | 1 cut(s) | 344 |
| CciI | TCATGA | 2 cut(s) | 1338, 1583 |
| CfoI | GCGC | 1 cut(s) | 1292 |
| Cfr10I | RCCGGY | 1 cut(s) | 1514 |
| Cfr13I | GGNCC | 3 cut(s) | 84, 491, 956 |
| CseI | GACGC | 2 cut(s) | 813, 1066 |
| Csp6I | GTAC | 4 cut(s) | 4, 190, 1028, 1256 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 100, 135 |
| CviQI | GTAC | 4 cut(s) | 4, 190, 1028, 1256 |
| DdeI | CTNAG | 6 cut(s) | 303, 1349, 1371, 1422, 1446, 1483 |
| DpnI | GATC | 4 cut(s) | 713, 726, 969, 1160 |
| DpnII | GATC | 4 cut(s) | 711, 724, 967, 1158 |
| DraI | TTTAAA | 1 cut(s) | 1194 |
| EaeI | YGGCCR | 2 cut(s) | 195, 1403 |
| Eam1104I | CTCTTC | 3 cut(s) | 47, 687, 987 |
| EarI | CTCTTC | 3 cut(s) | 47, 687, 987 |
| Eco130I | CCWWGG | 4 cut(s) | 767, 807, 846, 1139 |
| Eco147I | AGGCCT | 1 cut(s) | 1247 |
| Eco31I | GGTCTC | 2 cut(s) | 557, 1058 |
| Eco47I | GGWCC | 3 cut(s) | 84, 491, 956 |
| Eco57I | CTGAAG | 1 cut(s) | 851 |
| Eco91I | GGTNACC | 1 cut(s) | 1128 |
| EcoO109I | RGGNCCY | 1 cut(s) | 956 |
| EcoO65I | GGTNACC | 1 cut(s) | 1128 |
| EcoRI | GAATTC | 1 cut(s) | 451 |
| EcoRII | CCWGG | 1 cut(s) | 530 |
| EcoT14I | CCWWGG | 4 cut(s) | 767, 807, 846, 1139 |
| EcoT22I | ATGCAT | 1 cut(s) | 418 |
| ErhI | CCWWGG | 4 cut(s) | 767, 807, 846, 1139 |
| Esp3I | CGTCTC | 1 cut(s) | 831 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 998, 1030, 1522, 1554 |
| FaqI | GGGAC | 2 cut(s) | 931, 1287 |
| FblI | GTMKAC | 1 cut(s) | 842 |
| Fnu4HI | GCNGC | 6 cut(s) | 345, 644, 735, 852, 1095, 1403 |
| FokI | GGATG | 5 cut(s) | 345, 380, 824, 878, 1477 |
| Fsp4HI | GCNGC | 6 cut(s) | 345, 644, 735, 852, 1095, 1403 |
| FspBI | CTAG | 2 cut(s) | 768, 953 |
| GlaI | GCGC | 1 cut(s) | 1291 |
| GluI | GCNGC | 6 cut(s) | 345, 644, 735, 852, 1095, 1403 |
| GsaI | CCCAGC | 1 cut(s) | 702 |
| GsuI | CTGGAG | 1 cut(s) | 269 |
| HaeII | RGCGCY | 1 cut(s) | 1293 |
| HaeIII | GGCC | 4 cut(s) | 110, 197, 1247, 1405 |
| HapII | CCGG | 4 cut(s) | 382, 1388, 1475, 1515 |
| HgaI | GACGC | 2 cut(s) | 813, 1066 |
| HhaI | GCGC | 1 cut(s) | 1292 |
| Hin6I | GCGC | 1 cut(s) | 1290 |
| HinP1I | GCGC | 1 cut(s) | 1290 |
| HincII | GTYRAC | 1 cut(s) | 843 |
| HindII | GTYRAC | 1 cut(s) | 843 |
| HindIII | AAGCTT | 2 cut(s) | 389, 833 |
| HinfI | GANTC | 6 cut(s) | 158, 758, 1342, 1378, 1478, 1577 |
| HpaII | CCGG | 4 cut(s) | 382, 1388, 1475, 1515 |
| Hpy166II | GTNNAC | 5 cut(s) | 6, 87, 181, 843, 913 |
| Hpy188I | TCNGA | 5 cut(s) | 206, 583, 831, 1425, 1510 |
| Hpy188III | TCNNGA | 4 cut(s) | 560, 1299, 1339, 1584 |
| Hpy8I | GTNNAC | 5 cut(s) | 6, 87, 181, 843, 913 |
| Hpy99I | CGWCG | 1 cut(s) | 399 |
| HpyAV | CCTTC | 5 cut(s) | 119, 266, 646, 715, 969 |
| HpyCH4IV | ACGT | 3 cut(s) | 214, 397, 1563 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 194, 344, 440, 821, 1094, 1103, 1151, 1367 |
| HpyF3I | CTNAG | 6 cut(s) | 303, 1349, 1371, 1422, 1446, 1483 |
| HpySE526I | ACGT | 3 cut(s) | 214, 397, 1563 |
| HspAI | GCGC | 1 cut(s) | 1290 |
| Kzo9I | GATC | 4 cut(s) | 711, 724, 967, 1158 |
| LmnI | GCTCC | 1 cut(s) | 250 |
| Lsp1109I | GCAGC | 3 cut(s) | 331, 655, 838 |
| LweI | GCATC | 6 cut(s) | 331, 358, 397, 425, 802, 1176 |
| MaeI | CTAG | 2 cut(s) | 768, 953 |
| MaeII | ACGT | 3 cut(s) | 214, 397, 1563 |
| MaeIII | GTNAC | 4 cut(s) | 922, 1078, 1118, 1128 |
| MalI | GATC | 4 cut(s) | 713, 726, 969, 1160 |
| MboI | GATC | 4 cut(s) | 711, 724, 967, 1158 |
| MflI | RGATCY | 1 cut(s) | 967 |
| MhlI | GDGCHC | 1 cut(s) | 304 |
| MlsI | TGGCCA | 1 cut(s) | 197 |
| MluNI | TGGCCA | 1 cut(s) | 197 |
| MlyI | GAGTC | 2 cut(s) | 167, 1487 |
| MmeI | TCCRAC | 4 cut(s) | 135, 480, 594, 1355 |
| Mox20I | TGGCCA | 1 cut(s) | 197 |
| Mph1103I | ATGCAT | 1 cut(s) | 418 |
| MroXI | GAANNNNTTC | 2 cut(s) | 234, 390 |
| MscI | TGGCCA | 1 cut(s) | 197 |
| MseI | TTAA | 6 cut(s) | 485, 555, 1016, 1173, 1193, 1541 |
| MslI | CAYNNNNRTG | 1 cut(s) | 297 |
| Msp20I | TGGCCA | 1 cut(s) | 197 |
| MspI | CCGG | 4 cut(s) | 382, 1388, 1475, 1515 |
| MspR9I | CCNGG | 3 cut(s) | 383, 532, 1475 |
| MvaI | CCWGG | 1 cut(s) | 532 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 194, 344, 440, 821, 1094, 1103, 1151, 1367 |
| NciI | CCSGG | 2 cut(s) | 383, 1475 |
| NcoI | CCATGG | 2 cut(s) | 846, 1139 |
| NdeII | GATC | 4 cut(s) | 711, 724, 967, 1158 |
| NmuCI | GTSAC | 1 cut(s) | 1078 |
| NsiI | ATGCAT | 1 cut(s) | 418 |
| NspI | RCATGY | 1 cut(s) | 416 |
| PagI | TCATGA | 2 cut(s) | 1338, 1583 |
| PceI | AGGCCT | 1 cut(s) | 1247 |
| PdmI | GAANNNNTTC | 2 cut(s) | 234, 390 |
| PfeI | GAWTC | 4 cut(s) | 758, 1342, 1378, 1577 |
| PfoI | TCCNGGA | 2 cut(s) | 381, 1473 |
| PkrI | GCNGC | 6 cut(s) | 346, 645, 736, 853, 1096, 1404 |
| PleI | GAGTC | 2 cut(s) | 166, 1486 |
| PpsI | GAGTC | 2 cut(s) | 166, 1486 |
| PpuMI | RGGWCCY | 1 cut(s) | 956 |
| Psp1406I | AACGTT | 1 cut(s) | 1563 |
| Psp5II | RGGWCCY | 1 cut(s) | 956 |
| Psp6I | CCWGG | 1 cut(s) | 530 |
| PspEI | GGTNACC | 1 cut(s) | 1128 |
| PspFI | CCCAGC | 1 cut(s) | 698 |
| PspGI | CCWGG | 1 cut(s) | 530 |
| PspPI | GGNCC | 3 cut(s) | 84, 491, 956 |
| PspPPI | RGGWCCY | 1 cut(s) | 956 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1190, 1222 |
| PstI | CTGCAG | 1 cut(s) | 598 |
| PstNI | CAGNNNCTG | 1 cut(s) | 344 |
| PsuI | RGATCY | 1 cut(s) | 967 |
| RsaI | GTAC | 4 cut(s) | 5, 191, 1029, 1257 |
| RsaNI | GTAC | 4 cut(s) | 4, 190, 1028, 1256 |
| RseI | CAYNNNNRTG | 1 cut(s) | 297 |
| SalI | GTCGAC | 1 cut(s) | 841 |
| SaqAI | TTAA | 6 cut(s) | 485, 555, 1016, 1173, 1193, 1541 |
| SatI | GCNGC | 6 cut(s) | 345, 644, 735, 852, 1095, 1403 |
| Sau3AI | GATC | 4 cut(s) | 711, 724, 967, 1158 |
| Sau96I | GGNCC | 3 cut(s) | 84, 491, 956 |
| SchI | GAGTC | 2 cut(s) | 167, 1487 |
| ScrFI | CCNGG | 3 cut(s) | 383, 532, 1475 |
| SduI | GDGCHC | 1 cut(s) | 304 |
| SfaNI | GCATC | 6 cut(s) | 331, 358, 397, 425, 802, 1176 |
| SfcI | CTRYAG | 3 cut(s) | 495, 594, 963 |
| SinI | GGWCC | 3 cut(s) | 84, 491, 956 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 297 |
| SmlI | CTYRAG | 4 cut(s) | 317, 979, 1083, 1528 |
| SmoI | CTYRAG | 4 cut(s) | 317, 979, 1083, 1528 |
| SseBI | AGGCCT | 1 cut(s) | 1247 |
| SsiI | CCGC | 5 cut(s) | 489, 735, 1094, 1114, 1402 |
| SspMI | CTAG | 2 cut(s) | 768, 953 |
| StuI | AGGCCT | 1 cut(s) | 1247 |
| StyD4I | CCNGG | 3 cut(s) | 381, 530, 1473 |
| StyI | CCWWGG | 4 cut(s) | 767, 807, 846, 1139 |
| TaiI | ACGT | 3 cut(s) | 217, 400, 1566 |
| TaqI | TCGA | 3 cut(s) | 394, 539, 842 |
| TaqII | GACCGA | 1 cut(s) | 1082 |
| TatI | WGTACW | 2 cut(s) | 3, 1027 |
| TauI | GCSGC | 3 cut(s) | 737, 1097, 1405 |
| TfiI | GAWTC | 4 cut(s) | 758, 1342, 1378, 1577 |
| Tru1I | TTAA | 6 cut(s) | 485, 555, 1016, 1173, 1193, 1541 |
| Tru9I | TTAA | 6 cut(s) | 485, 555, 1016, 1173, 1193, 1541 |
| TscAI | CASTG | 3 cut(s) | 744, 1037, 1491 |
| TseFI | GTSAC | 1 cut(s) | 1078 |
| TseI | GCWGC | 3 cut(s) | 344, 643, 851 |
| Tsp45I | GTSAC | 1 cut(s) | 1078 |
| TspRI | CASTG | 3 cut(s) | 744, 1037, 1491 |
| VpaK11BI | GGWCC | 3 cut(s) | 84, 491, 956 |
| XapI | RAATTY | 3 cut(s) | 70, 451, 1178 |
| XceI | RCATGY | 1 cut(s) | 416 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 610 |
| XmaJI | CCTAGG | 1 cut(s) | 767 |
| XmiI | GTMKAC | 1 cut(s) | 842 |
| XmnI | GAANNNNTTC | 2 cut(s) | 234, 390 |
| XspI | CTAG | 2 cut(s) | 768, 953 |
| Zsp2I | ATGCAT | 1 cut(s) | 418 |