Protein ROOT HAIR DEFECTIVE 3 homolog
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1392 |
| Acc16I | TGCGCA | 1 cut(s) | 798 |
| AccB1I | GGYRCC | 1 cut(s) | 216 |
| AccII | CGCG | 1 cut(s) | 1094 |
| AccIII | TCCGGA | 1 cut(s) | 101 |
| AciI | CCGC | 2 cut(s) | 327, 1625 |
| AclWI | GGATC | 2 cut(s) | 71, 846 |
| AcoI | YGGCCR | 1 cut(s) | 478 |
| AcsI | RAATTY | 5 cut(s) | 516, 804, 899, 1590, 1647 |
| AcuI | CTGAAG | 1 cut(s) | 1544 |
| AcvI | CACGTG | 1 cut(s) | 1376 |
| AfaI | GTAC | 3 cut(s) | 507, 613, 1062 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 779, 968, 1263, 1264, 1619 |
| AflIII | ACRYGT | 3 cut(s) | 1004, 1092, 1375 |
| AgsI | TTSAA | 5 cut(s) | 52, 190, 934, 1199, 1417 |
| AjnI | CCWGG | 3 cut(s) | 450, 733, 834 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1601, 1633 |
| AleI | CACNNNNGTG | 1 cut(s) | 1604 |
| AluBI | AGCT | 8 cut(s) | 419, 465, 541, 947, 990, 1247, 1319, 1675 |
| AluI | AGCT | 8 cut(s) | 419, 465, 541, 947, 990, 1247, 1319, 1675 |
| Alw21I | GWGCWC | 3 cut(s) | 158, 349, 398 |
| Alw26I | GTCTC | 4 cut(s) | 518, 989, 995, 1247 |
| Alw44I | GTGCAC | 1 cut(s) | 394 |
| AlwI | GGATC | 2 cut(s) | 71, 846 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1304 |
| Ama87I | CYCGRG | 1 cut(s) | 1263 |
| Aor13HI | TCCGGA | 1 cut(s) | 101 |
| AoxI | GGCC | 2 cut(s) | 472, 478 |
| ApaLI | GTGCAC | 1 cut(s) | 394 |
| ApeKI | GCWGC | 6 cut(s) | 95, 419, 709, 799, 1244, 1304 |
| ApoI | RAATTY | 5 cut(s) | 516, 804, 899, 1590, 1647 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 564, 971 |
| AspLEI | GCGC | 1 cut(s) | 799 |
| AspS9I | GGNCC | 4 cut(s) | 134, 473, 832, 959 |
| AsuC2I | CCSGG | 1 cut(s) | 477 |
| AsuHPI | GGTGA | 3 cut(s) | 56, 764, 989 |
| AvaI | CYCGRG | 1 cut(s) | 1263 |
| AvaII | GGWCC | 3 cut(s) | 134, 832, 959 |
| BaeGI | GKGCMC | 1 cut(s) | 398 |
| BanI | GGYRCC | 1 cut(s) | 216 |
| BbrPI | CACGTG | 1 cut(s) | 1376 |
| BbsI | GAAGAC | 2 cut(s) | 439, 494 |
| Bbv12I | GWGCWC | 3 cut(s) | 158, 349, 398 |
| BbvI | GCAGC | 6 cut(s) | 82, 406, 721, 811, 1256, 1291 |
| BccI | CCATC | 5 cut(s) | 29, 177, 293, 624, 1507 |
| BceAI | ACGGC | 5 cut(s) | 101, 110, 263, 465, 679 |
| BciT130I | CCWGG | 3 cut(s) | 452, 735, 836 |
| BclI | TGATCA | 1 cut(s) | 1663 |
| BcnI | CCSGG | 1 cut(s) | 477 |
| BcoDI | GTCTC | 4 cut(s) | 518, 989, 995, 1247 |
| BfaI | CTAG | 2 cut(s) | 359, 998 |
| BfmI | CTRYAG | 1 cut(s) | 1676 |
| BisI | GCNGC | 7 cut(s) | 96, 420, 710, 800, 1245, 1305, 1626 |
| BlsI | GCNGC | 7 cut(s) | 97, 421, 711, 801, 1246, 1306, 1627 |
| Bme1390I | CCNGG | 4 cut(s) | 452, 477, 735, 836 |
| Bme18I | GGWCC | 3 cut(s) | 134, 832, 959 |
| BmeT110I | CYCGRG | 1 cut(s) | 1263 |
| BmgT120I | GGNCC | 4 cut(s) | 134, 473, 832, 959 |
| BmiI | GGNNCC | 3 cut(s) | 135, 218, 475 |
| BmrFI | CCNGG | 4 cut(s) | 452, 477, 735, 836 |
| BmsI | GCATC | 5 cut(s) | 267, 785, 1277, 1291, 1489 |
| BpiI | GAAGAC | 2 cut(s) | 439, 494 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 299, 331 |
| BpmI | CTGGAG | 2 cut(s) | 756, 1652 |
| BpuEI | CTTGAG | 1 cut(s) | 527 |
| BpuMI | CCSGG | 1 cut(s) | 477 |
| Bsa29I | ATCGAT | 1 cut(s) | 33 |
| BsaAI | YACGTR | 2 cut(s) | 509, 1376 |
| BsaI | GGTCTC | 2 cut(s) | 518, 1247 |
| BsaJI | CCNNGG | 3 cut(s) | 279, 475, 1288 |
| BsaWI | WCCGGW | 1 cut(s) | 101 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 779, 968, 1263, 1264, 1619 |
| Bse1I | ACTGG | 1 cut(s) | 1635 |
| Bse3DI | GCAATG | 2 cut(s) | 46, 1404 |
| BseAI | TCCGGA | 1 cut(s) | 101 |
| BseBI | CCWGG | 3 cut(s) | 452, 735, 836 |
| BseCI | ATCGAT | 1 cut(s) | 33 |
| BseDI | CCNNGG | 3 cut(s) | 279, 475, 1288 |
| BseGI | GGATG | 3 cut(s) | 88, 586, 1298 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 779, 968, 1263, 1264, 1619 |
| BseMI | GCAATG | 2 cut(s) | 46, 1404 |
| BseMII | CTCAG | 6 cut(s) | 152, 695, 1000, 1203, 1269, 1463 |
| BseNI | ACTGG | 1 cut(s) | 1635 |
| BseRI | GAGGAG | 3 cut(s) | 701, 704, 1457 |
| BseSI | GKGCMC | 1 cut(s) | 398 |
| BseX3I | CGGCCG | 1 cut(s) | 478 |
| BseXI | GCAGC | 6 cut(s) | 82, 406, 721, 811, 1256, 1291 |
| BsgI | GTGCAG | 1 cut(s) | 1317 |
| Bsh1236I | CGCG | 1 cut(s) | 1094 |
| Bsh1285I | CGRYCG | 2 cut(s) | 276, 481 |
| BshFI | GGCC | 2 cut(s) | 474, 480 |
| BshNI | GGYRCC | 1 cut(s) | 216 |
| BshVI | ATCGAT | 1 cut(s) | 33 |
| BsiEI | CGRYCG | 2 cut(s) | 276, 481 |
| BsiHKAI | GWGCWC | 3 cut(s) | 158, 349, 398 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1263 |
| BsiSI | CCGG | 2 cut(s) | 102, 477 |
| BslFI | GGGAC | 2 cut(s) | 640, 755 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 779, 968, 1263, 1264, 1619 |
| BsmAI | GTCTC | 4 cut(s) | 518, 989, 995, 1247 |
| BsmFI | GGGAC | 2 cut(s) | 640, 755 |
| BsmI | GAATGC | 1 cut(s) | 329 |
| BsnI | GGCC | 2 cut(s) | 474, 480 |
| Bso31I | GGTCTC | 2 cut(s) | 518, 1247 |
| BsoBI | CYCGRG | 1 cut(s) | 1263 |
| Bsp1286I | GDGCHC | 3 cut(s) | 158, 349, 398 |
| Bsp13I | TCCGGA | 1 cut(s) | 101 |
| Bsp143I | GATC | 5 cut(s) | 63, 273, 838, 1358, 1663 |
| BspACI | CCGC | 2 cut(s) | 327, 1625 |
| BspANI | GGCC | 2 cut(s) | 474, 480 |
| BspCNI | CTCAG | 6 cut(s) | 151, 696, 999, 1204, 1270, 1462 |
| BspDI | ATCGAT | 1 cut(s) | 33 |
| BspEI | TCCGGA | 1 cut(s) | 101 |
| BspFNI | CGCG | 1 cut(s) | 1094 |
| BspLI | GGNNCC | 3 cut(s) | 135, 218, 475 |
| BspPI | GGATC | 2 cut(s) | 71, 846 |
| BspQI | GCTCTTC | 1 cut(s) | 146 |
| BspT107I | GGYRCC | 1 cut(s) | 216 |
| BspTNI | GGTCTC | 2 cut(s) | 518, 1247 |
| BsrDI | GCAATG | 2 cut(s) | 46, 1404 |
| BsrI | ACTGG | 1 cut(s) | 1635 |
| BssECI | CCNNGG | 3 cut(s) | 279, 475, 1288 |
| BssMI | GATC | 5 cut(s) | 63, 273, 838, 1358, 1663 |
| BssT1I | CCWWGG | 1 cut(s) | 1288 |
| Bst2UI | CCWGG | 3 cut(s) | 452, 735, 836 |
| Bst4CI | ACNGT | 5 cut(s) | 17, 445, 498, 1538, 1566 |
| Bst6I | CTCTTC | 2 cut(s) | 146, 754 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1241, 1304 |
| BstBAI | YACGTR | 2 cut(s) | 509, 1376 |
| BstC8I | GCNNGC | 3 cut(s) | 317, 417, 744 |
| BstDEI | CTNAG | 8 cut(s) | 138, 437, 704, 986, 1212, 1278, 1449, 1603 |
| BstDSI | CCRYGG | 1 cut(s) | 279 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 777, 966 |
| BstF5I | GGATG | 3 cut(s) | 88, 586, 1298 |
| BstFNI | CGCG | 1 cut(s) | 1094 |
| BstHHI | GCGC | 1 cut(s) | 799 |
| BstKTI | GATC | 5 cut(s) | 66, 276, 841, 1361, 1666 |
| BstMAI | GTCTC | 4 cut(s) | 518, 989, 995, 1247 |
| BstMBI | GATC | 5 cut(s) | 63, 273, 838, 1358, 1663 |
| BstMCI | CGRYCG | 2 cut(s) | 276, 481 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 122, 300, 353, 471, 1154, 1241, 1304 |
| BstNI | CCWGG | 3 cut(s) | 452, 735, 836 |
| BstNSI | RCATGY | 1 cut(s) | 1008 |
| BstSCI | CCNGG | 4 cut(s) | 450, 475, 733, 834 |
| BstSFI | CTRYAG | 1 cut(s) | 1676 |
| BstSLI | GKGCMC | 1 cut(s) | 398 |
| BstUI | CGCG | 1 cut(s) | 1094 |
| BstV1I | GCAGC | 6 cut(s) | 82, 406, 721, 811, 1256, 1291 |
| BstV2I | GAAGAC | 2 cut(s) | 439, 494 |
| BstX2I | RGATCY | 1 cut(s) | 838 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1513 |
| BstYI | RGATCY | 1 cut(s) | 838 |
| BstZI | CGGCCG | 1 cut(s) | 478 |
| Bsu15I | ATCGAT | 1 cut(s) | 33 |
| BsuRI | GGCC | 2 cut(s) | 474, 480 |
| BsuTUI | ATCGAT | 1 cut(s) | 33 |
| BtgI | CCRYGG | 1 cut(s) | 279 |
| BtsCI | GGATG | 3 cut(s) | 88, 586, 1298 |
| BtsI | GCAGTG | 2 cut(s) | 151, 301 |
| BtsIMutI | CAGTG | 5 cut(s) | 151, 301, 396, 799, 1628 |
| Cac8I | GCNNGC | 3 cut(s) | 317, 417, 744 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1304 |
| CfoI | GCGC | 1 cut(s) | 799 |
| Cfr13I | GGNCC | 4 cut(s) | 134, 473, 832, 959 |
| ClaI | ATCGAT | 1 cut(s) | 33 |
| CseI | GACGC | 1 cut(s) | 87 |
| Csp6I | GTAC | 3 cut(s) | 506, 612, 1061 |
| CviAII | CATG | 6 cut(s) | 130, 320, 599, 605, 1005, 1159 |
| CviQI | GTAC | 3 cut(s) | 506, 612, 1061 |
| DdeI | CTNAG | 8 cut(s) | 138, 437, 704, 986, 1212, 1278, 1449, 1603 |
| DpnI | GATC | 5 cut(s) | 65, 275, 840, 1360, 1665 |
| DpnII | GATC | 5 cut(s) | 63, 273, 838, 1358, 1663 |
| EaeI | YGGCCR | 1 cut(s) | 478 |
| EagI | CGGCCG | 1 cut(s) | 478 |
| Eam1104I | CTCTTC | 2 cut(s) | 146, 754 |
| EarI | CTCTTC | 2 cut(s) | 146, 754 |
| EclXI | CGGCCG | 1 cut(s) | 478 |
| Eco130I | CCWWGG | 1 cut(s) | 1288 |
| Eco31I | GGTCTC | 2 cut(s) | 518, 1247 |
| Eco47I | GGWCC | 3 cut(s) | 134, 832, 959 |
| Eco52I | CGGCCG | 1 cut(s) | 478 |
| Eco57I | CTGAAG | 1 cut(s) | 1544 |
| Eco72I | CACGTG | 1 cut(s) | 1376 |
| Eco88I | CYCGRG | 1 cut(s) | 1263 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 777, 966 |
| EcoO109I | RGGNCCY | 2 cut(s) | 134, 832 |
| EcoRII | CCWGG | 3 cut(s) | 450, 733, 834 |
| EcoT14I | CCWWGG | 1 cut(s) | 1288 |
| ErhI | CCWWGG | 1 cut(s) | 1288 |
| FaeI | CATG | 6 cut(s) | 133, 323, 602, 608, 1008, 1162 |
| FaqI | GGGAC | 2 cut(s) | 640, 755 |
| FatI | CATG | 6 cut(s) | 129, 319, 598, 604, 1004, 1158 |
| FbaI | TGATCA | 1 cut(s) | 1663 |
| Fnu4HI | GCNGC | 7 cut(s) | 96, 420, 710, 800, 1245, 1305, 1626 |
| FokI | GGATG | 3 cut(s) | 95, 593, 1305 |
| Fsp4HI | GCNGC | 7 cut(s) | 96, 420, 710, 800, 1245, 1305, 1626 |
| FspBI | CTAG | 2 cut(s) | 359, 998 |
| FspI | TGCGCA | 1 cut(s) | 798 |
| GlaI | GCGC | 1 cut(s) | 798 |
| GluI | GCNGC | 7 cut(s) | 96, 420, 710, 800, 1245, 1305, 1626 |
| GsuI | CTGGAG | 2 cut(s) | 756, 1652 |
| HaeIII | GGCC | 2 cut(s) | 474, 480 |
| HapII | CCGG | 2 cut(s) | 102, 477 |
| HgaI | GACGC | 1 cut(s) | 87 |
| HhaI | GCGC | 1 cut(s) | 799 |
| Hin1II | CATG | 6 cut(s) | 133, 323, 602, 608, 1008, 1162 |
| Hin6I | GCGC | 1 cut(s) | 797 |
| HinP1I | GCGC | 1 cut(s) | 797 |
| HincII | GTYRAC | 1 cut(s) | 912 |
| HindII | GTYRAC | 1 cut(s) | 912 |
| HinfI | GANTC | 4 cut(s) | 107, 1331, 1426, 1609 |
| HpaII | CCGG | 2 cut(s) | 102, 477 |
| HphI | GGTGA | 3 cut(s) | 56, 764, 989 |
| Hpy166II | GTNNAC | 2 cut(s) | 396, 912 |
| Hpy188I | TCNGA | 7 cut(s) | 141, 370, 591, 1358, 1363, 1452, 1668 |
| Hpy8I | GTNNAC | 2 cut(s) | 396, 912 |
| Hpy99I | CGWCG | 2 cut(s) | 122, 1577 |
| HpyAV | CCTTC | 4 cut(s) | 203, 207, 855, 1519 |
| HpyCH4III | ACNGT | 5 cut(s) | 17, 445, 498, 1538, 1566 |
| HpyCH4IV | ACGT | 6 cut(s) | 508, 1059, 1144, 1174, 1375, 1584 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 122, 300, 353, 471, 1154, 1241, 1304 |
| HpyF3I | CTNAG | 8 cut(s) | 138, 437, 704, 986, 1212, 1278, 1449, 1603 |
| HpySE526I | ACGT | 6 cut(s) | 508, 1059, 1144, 1174, 1375, 1584 |
| Hsp92II | CATG | 6 cut(s) | 133, 323, 602, 608, 1008, 1162 |
| HspAI | GCGC | 1 cut(s) | 797 |
| Kpn2I | TCCGGA | 1 cut(s) | 101 |
| Ksp22I | TGATCA | 1 cut(s) | 1663 |
| Kzo9I | GATC | 5 cut(s) | 63, 273, 838, 1358, 1663 |
| LguI | GCTCTTC | 1 cut(s) | 146 |
| LmnI | GCTCC | 1 cut(s) | 1516 |
| Lsp1109I | GCAGC | 6 cut(s) | 82, 406, 721, 811, 1256, 1291 |
| LweI | GCATC | 5 cut(s) | 267, 785, 1277, 1291, 1489 |
| MaeI | CTAG | 2 cut(s) | 359, 998 |
| MaeII | ACGT | 6 cut(s) | 508, 1059, 1144, 1174, 1375, 1584 |
| MaeIII | GTNAC | 3 cut(s) | 19, 44, 1657 |
| MalI | GATC | 5 cut(s) | 65, 275, 840, 1360, 1665 |
| MboI | GATC | 5 cut(s) | 63, 273, 838, 1358, 1663 |
| MboII | GAAGA | 7 cut(s) | 163, 439, 499, 572, 688, 771, 833 |
| MflI | RGATCY | 1 cut(s) | 838 |
| MhlI | GDGCHC | 3 cut(s) | 158, 349, 398 |
| MluI | ACGCGT | 1 cut(s) | 1092 |
| MmeI | TCCRAC | 2 cut(s) | 744, 1618 |
| MroI | TCCGGA | 1 cut(s) | 101 |
| MroXI | GAANNNNTTC | 2 cut(s) | 564, 971 |
| MseI | TTAA | 8 cut(s) | 992, 1011, 1055, 1076, 1125, 1323, 1653, 1671 |
| MslI | CAYNNNNRTG | 5 cut(s) | 161, 603, 621, 1040, 1604 |
| MspA1I | CMGCKG | 1 cut(s) | 1247 |
| MspI | CCGG | 2 cut(s) | 102, 477 |
| MspR9I | CCNGG | 4 cut(s) | 452, 477, 735, 836 |
| Mva1269I | GAATGC | 1 cut(s) | 329 |
| MvaI | CCWGG | 3 cut(s) | 452, 735, 836 |
| MvnI | CGCG | 1 cut(s) | 1094 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 122, 300, 353, 471, 1154, 1241, 1304 |
| NciI | CCSGG | 1 cut(s) | 477 |
| NdeII | GATC | 5 cut(s) | 63, 273, 838, 1358, 1663 |
| NlaIII | CATG | 6 cut(s) | 133, 323, 602, 608, 1008, 1162 |
| NlaIV | GGNNCC | 3 cut(s) | 135, 218, 475 |
| NmuCI | GTSAC | 2 cut(s) | 44, 1657 |
| NsbI | TGCGCA | 1 cut(s) | 798 |
| NspI | RCATGY | 1 cut(s) | 1008 |
| OliI | CACNNNNGTG | 1 cut(s) | 1604 |
| PciI | ACATGT | 1 cut(s) | 1004 |
| PciSI | GCTCTTC | 1 cut(s) | 146 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 269, 1581 |
| PctI | GAATGC | 1 cut(s) | 329 |
| PdmI | GAANNNNTTC | 2 cut(s) | 564, 971 |
| PfeI | GAWTC | 4 cut(s) | 107, 1331, 1426, 1609 |
| PfoI | TCCNGGA | 1 cut(s) | 733 |
| PkrI | GCNGC | 7 cut(s) | 97, 421, 711, 801, 1246, 1306, 1627 |
| Ple19I | CGATCG | 1 cut(s) | 276 |
| PmaCI | CACGTG | 1 cut(s) | 1376 |
| PmlI | CACGTG | 1 cut(s) | 1376 |
| Ppu21I | YACGTR | 2 cut(s) | 509, 1376 |
| PpuMI | RGGWCCY | 2 cut(s) | 134, 832 |
| PscI | ACATGT | 1 cut(s) | 1004 |
| PsiI | TTATAA | 1 cut(s) | 1392 |
| Psp5II | RGGWCCY | 2 cut(s) | 134, 832 |
| Psp6I | CCWGG | 3 cut(s) | 450, 733, 834 |
| PspCI | CACGTG | 1 cut(s) | 1376 |
| PspGI | CCWGG | 3 cut(s) | 450, 733, 834 |
| PspN4I | GGNNCC | 3 cut(s) | 135, 218, 475 |
| PspPI | GGNCC | 4 cut(s) | 134, 473, 832, 959 |
| PspPPI | RGGWCCY | 2 cut(s) | 134, 832 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1304 |
| PsuI | RGATCY | 1 cut(s) | 838 |
| PvuI | CGATCG | 1 cut(s) | 276 |
| PvuII | CAGCTG | 1 cut(s) | 1247 |
| RsaI | GTAC | 3 cut(s) | 507, 613, 1062 |
| RsaNI | GTAC | 3 cut(s) | 506, 612, 1061 |
| RseI | CAYNNNNRTG | 5 cut(s) | 161, 603, 621, 1040, 1604 |
| SapI | GCTCTTC | 1 cut(s) | 146 |
| SaqAI | TTAA | 8 cut(s) | 992, 1011, 1055, 1076, 1125, 1323, 1653, 1671 |
| SatI | GCNGC | 7 cut(s) | 96, 420, 710, 800, 1245, 1305, 1626 |
| Sau3AI | GATC | 5 cut(s) | 63, 273, 838, 1358, 1663 |
| Sau96I | GGNCC | 4 cut(s) | 134, 473, 832, 959 |
| ScrFI | CCNGG | 4 cut(s) | 452, 477, 735, 836 |
| SduI | GDGCHC | 3 cut(s) | 158, 349, 398 |
| SfaNI | GCATC | 5 cut(s) | 267, 785, 1277, 1291, 1489 |
| SfcI | CTRYAG | 1 cut(s) | 1676 |
| SinI | GGWCC | 3 cut(s) | 134, 832, 959 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 161, 603, 621, 1040, 1604 |
| SmlI | CTYRAG | 1 cut(s) | 542 |
| SmoI | CTYRAG | 1 cut(s) | 542 |
| SsiI | CCGC | 2 cut(s) | 327, 1625 |
| SspMI | CTAG | 2 cut(s) | 359, 998 |
| StyD4I | CCNGG | 4 cut(s) | 450, 475, 733, 834 |
| StyI | CCWWGG | 1 cut(s) | 1288 |
| TaaI | ACNGT | 5 cut(s) | 17, 445, 498, 1538, 1566 |
| TaiI | ACGT | 6 cut(s) | 511, 1062, 1147, 1177, 1378, 1587 |
| TaqI | TCGA | 6 cut(s) | 33, 333, 409, 1164, 1561, 1572 |
| TauI | GCSGC | 1 cut(s) | 1628 |
| TfiI | GAWTC | 4 cut(s) | 107, 1331, 1426, 1609 |
| Tru1I | TTAA | 8 cut(s) | 992, 1011, 1055, 1076, 1125, 1323, 1653, 1671 |
| Tru9I | TTAA | 8 cut(s) | 992, 1011, 1055, 1076, 1125, 1323, 1653, 1671 |
| TscAI | CASTG | 5 cut(s) | 151, 301, 403, 799, 1635 |
| TseFI | GTSAC | 2 cut(s) | 44, 1657 |
| TseI | GCWGC | 6 cut(s) | 95, 419, 709, 799, 1244, 1304 |
| Tsp45I | GTSAC | 2 cut(s) | 44, 1657 |
| TspDTI | ATGAA | 9 cut(s) | 179, 212, 557, 597, 615, 621, 639, 1115, 1439 |
| TspRI | CASTG | 5 cut(s) | 151, 301, 403, 799, 1635 |
| VneI | GTGCAC | 1 cut(s) | 394 |
| VpaK11BI | GGWCC | 3 cut(s) | 134, 832, 959 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 777, 966 |
| XapI | RAATTY | 5 cut(s) | 516, 804, 899, 1590, 1647 |
| XbaI | TCTAGA | 1 cut(s) | 997 |
| XceI | RCATGY | 1 cut(s) | 1008 |
| XmnI | GAANNNNTTC | 2 cut(s) | 564, 971 |
| XspI | CTAG | 2 cut(s) | 359, 998 |