Protein ROOT HAIR DEFECTIVE 3 homolog
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 712, 1581, 1812 |
| AclI | AACGTT | 2 cut(s) | 870, 1148 |
| AclWI | GGATC | 2 cut(s) | 71, 846 |
| AcoI | YGGCCR | 2 cut(s) | 37, 478 |
| AcsI | RAATTY | 2 cut(s) | 47, 516 |
| AfaI | GTAC | 5 cut(s) | 507, 613, 1037, 1115, 1261 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 778, 779, 873 |
| AjiI | CACGTC | 1 cut(s) | 1070 |
| AjnI | CCWGG | 1 cut(s) | 834 |
| Alw21I | GWGCWC | 4 cut(s) | 158, 349, 799, 1107 |
| Alw26I | GTCTC | 3 cut(s) | 518, 660, 1022 |
| Alw44I | GTGCAC | 1 cut(s) | 1103 |
| AlwI | GGATC | 2 cut(s) | 71, 846 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1268, 1346 |
| Ama87I | CYCGRG | 1 cut(s) | 778 |
| AoxI | GGCC | 3 cut(s) | 37, 478, 1496 |
| ApaLI | GTGCAC | 1 cut(s) | 1103 |
| ApeKI | GCWGC | 8 cut(s) | 15, 95, 419, 709, 1268, 1565, 1817, 1850 |
| ApoI | RAATTY | 2 cut(s) | 47, 516 |
| AseI | ATTAAT | 1 cut(s) | 567 |
| AspLEI | GCGC | 5 cut(s) | 358, 1483, 1553, 1817, 1850 |
| AspS9I | GGNCC | 3 cut(s) | 134, 473, 1496 |
| AsuC2I | CCSGG | 1 cut(s) | 477 |
| AsuHPI | GGTGA | 4 cut(s) | 56, 723, 764, 989 |
| AsuII | TTCGAA | 1 cut(s) | 1359 |
| AvaI | CYCGRG | 1 cut(s) | 778 |
| AvaII | GGWCC | 2 cut(s) | 134, 473 |
| BaeGI | GKGCMC | 1 cut(s) | 1107 |
| BanII | GRGCYC | 1 cut(s) | 317 |
| BbsI | GAAGAC | 4 cut(s) | 494, 1203, 1224, 1348 |
| Bbv12I | GWGCWC | 4 cut(s) | 158, 349, 799, 1107 |
| BbvI | GCAGC | 8 cut(s) | 2, 82, 406, 721, 1255, 1577, 1804, 1862 |
| BciT130I | CCWGG | 1 cut(s) | 836 |
| BclI | TGATCA | 1 cut(s) | 1125 |
| BcnI | CCSGG | 1 cut(s) | 477 |
| BcoDI | GTCTC | 3 cut(s) | 518, 660, 1022 |
| BfaI | CTAG | 1 cut(s) | 998 |
| BfoI | RGCGCY | 3 cut(s) | 1484, 1554, 1818 |
| BlpI | GCTNAGC | 2 cut(s) | 798, 1484 |
| BmcAI | AGTACT | 1 cut(s) | 1037 |
| Bme1390I | CCNGG | 2 cut(s) | 477, 836 |
| Bme18I | GGWCC | 2 cut(s) | 134, 473 |
| BmeT110I | CYCGRG | 1 cut(s) | 778 |
| BmgBI | CACGTC | 1 cut(s) | 1070 |
| BmgT120I | GGNCC | 3 cut(s) | 134, 473, 1496 |
| BmiI | GGNNCC | 4 cut(s) | 135, 218, 475, 1497 |
| BmrFI | CCNGG | 2 cut(s) | 477, 836 |
| BmsI | GCATC | 5 cut(s) | 405, 1195, 1217, 1255, 1270 |
| BpiI | GAAGAC | 4 cut(s) | 494, 1203, 1224, 1348 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 299, 331, 1365, 1397 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1401 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 798, 1484 |
| Bpu14I | TTCGAA | 1 cut(s) | 1359 |
| BpuEI | CTTGAG | 1 cut(s) | 1367 |
| BpuMI | CCSGG | 1 cut(s) | 477 |
| Bsa29I | ATCGAT | 1 cut(s) | 33 |
| BsaAI | YACGTR | 1 cut(s) | 509 |
| BsaBI | GATNNNNATC | 1 cut(s) | 68 |
| BsaI | GGTCTC | 2 cut(s) | 518, 1022 |
| BsaJI | CCNNGG | 3 cut(s) | 40, 777, 1252 |
| BsaWI | WCCGGW | 1 cut(s) | 733 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 1019, 1049, 1656, 1686, 1689, 1719, 1773, 1803 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 778, 779, 873 |
| Bse118I | RCCGGY | 5 cut(s) | 1613, 1646, 1679, 1712, 1745 |
| Bse1I | ACTGG | 1 cut(s) | 942 |
| Bse3DI | GCAATG | 1 cut(s) | 1543 |
| Bse8I | GATNNNNATC | 1 cut(s) | 68 |
| BseBI | CCWGG | 1 cut(s) | 836 |
| BseCI | ATCGAT | 1 cut(s) | 33 |
| BseDI | CCNNGG | 3 cut(s) | 40, 777, 1252 |
| BseGI | GGATG | 6 cut(s) | 88, 205, 1262, 1297, 1425, 1534 |
| BseJI | GATNNNNATC | 1 cut(s) | 68 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 778, 779, 873 |
| BseMI | GCAATG | 1 cut(s) | 1543 |
| BseMII | CTCAG | 4 cut(s) | 152, 634, 812, 1218 |
| BseNI | ACTGG | 1 cut(s) | 942 |
| BseRI | GAGGAG | 3 cut(s) | 701, 704, 896 |
| BseSI | GKGCMC | 1 cut(s) | 1107 |
| BseX3I | CGGCCG | 1 cut(s) | 478 |
| BseXI | GCAGC | 8 cut(s) | 2, 82, 406, 721, 1255, 1577, 1804, 1862 |
| BseYI | CCCAGC | 1 cut(s) | 1108 |
| Bsh1285I | CGRYCG | 1 cut(s) | 481 |
| BshFI | GGCC | 3 cut(s) | 39, 480, 1498 |
| BshVI | ATCGAT | 1 cut(s) | 33 |
| BsiEI | CGRYCG | 1 cut(s) | 481 |
| BsiHKAI | GWGCWC | 4 cut(s) | 158, 349, 799, 1107 |
| BsiHKCI | CYCGRG | 1 cut(s) | 778 |
| BsiSI | CCGG | 9 cut(s) | 210, 477, 734, 1614, 1647, 1680, 1713, 1746, 1779 |
| BslFI | GGGAC | 4 cut(s) | 459, 593, 755, 1347 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 778, 779, 873 |
| BsmAI | GTCTC | 3 cut(s) | 518, 660, 1022 |
| BsmFI | GGGAC | 4 cut(s) | 459, 593, 755, 1347 |
| BsmI | GAATGC | 1 cut(s) | 329 |
| BsnI | GGCC | 3 cut(s) | 39, 480, 1498 |
| Bso31I | GGTCTC | 2 cut(s) | 518, 1022 |
| BsoBI | CYCGRG | 1 cut(s) | 778 |
| Bsp119I | TTCGAA | 1 cut(s) | 1359 |
| Bsp1286I | GDGCHC | 5 cut(s) | 158, 317, 349, 799, 1107 |
| Bsp1407I | TGTACA | 1 cut(s) | 1259 |
| Bsp143I | GATC | 3 cut(s) | 63, 838, 1125 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 798, 1484 |
| Bsp19I | CCATGG | 1 cut(s) | 1252 |
| BspACI | CCGC | 3 cut(s) | 712, 1581, 1812 |
| BspANI | GGCC | 3 cut(s) | 39, 480, 1498 |
| BspCNI | CTCAG | 4 cut(s) | 151, 633, 811, 1219 |
| BspDI | ATCGAT | 1 cut(s) | 33 |
| BspLI | GGNNCC | 4 cut(s) | 135, 218, 475, 1497 |
| BspPI | GGATC | 2 cut(s) | 71, 846 |
| BspQI | GCTCTTC | 2 cut(s) | 146, 1434 |
| BspT104I | TTCGAA | 1 cut(s) | 1359 |
| BspTNI | GGTCTC | 2 cut(s) | 518, 1022 |
| BsrDI | GCAATG | 1 cut(s) | 1543 |
| BsrFI | RCCGGY | 5 cut(s) | 1613, 1646, 1679, 1712, 1745 |
| BsrGI | TGTACA | 1 cut(s) | 1259 |
| BsrI | ACTGG | 1 cut(s) | 942 |
| BssAI | RCCGGY | 5 cut(s) | 1613, 1646, 1679, 1712, 1745 |
| BssECI | CCNNGG | 3 cut(s) | 40, 777, 1252 |
| BssMI | GATC | 3 cut(s) | 63, 838, 1125 |
| BssT1I | CCWWGG | 1 cut(s) | 1252 |
| Bst2UI | CCWGG | 1 cut(s) | 836 |
| Bst4CI | ACNGT | 2 cut(s) | 445, 1051 |
| Bst6I | CTCTTC | 2 cut(s) | 146, 1434 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1346, 1571 |
| BstAUI | TGTACA | 1 cut(s) | 1259 |
| BstBAI | YACGTR | 1 cut(s) | 509 |
| BstBI | TTCGAA | 1 cut(s) | 1359 |
| BstDEI | CTNAG | 8 cut(s) | 138, 437, 620, 798, 1227, 1316, 1401, 1484 |
| BstDSI | CCRYGG | 2 cut(s) | 40, 1252 |
| BstF5I | GGATG | 6 cut(s) | 88, 205, 1262, 1297, 1425, 1534 |
| BstH2I | RGCGCY | 3 cut(s) | 1484, 1554, 1818 |
| BstHHI | GCGC | 5 cut(s) | 358, 1483, 1553, 1817, 1850 |
| BstKTI | GATC | 3 cut(s) | 66, 841, 1128 |
| BstMAI | GTCTC | 3 cut(s) | 518, 660, 1022 |
| BstMBI | GATC | 3 cut(s) | 63, 838, 1125 |
| BstMCI | CGRYCG | 1 cut(s) | 481 |
| BstNI | CCWGG | 1 cut(s) | 836 |
| BstNSI | RCATGY | 1 cut(s) | 1340 |
| BstSCI | CCNGG | 2 cut(s) | 475, 834 |
| BstSLI | GKGCMC | 1 cut(s) | 1107 |
| BstV1I | GCAGC | 8 cut(s) | 2, 82, 406, 721, 1255, 1577, 1804, 1862 |
| BstV2I | GAAGAC | 4 cut(s) | 494, 1203, 1224, 1348 |
| BstX2I | RGATCY | 1 cut(s) | 838 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1465 |
| BstYI | RGATCY | 1 cut(s) | 838 |
| BstZI | CGGCCG | 1 cut(s) | 478 |
| Bsu15I | ATCGAT | 1 cut(s) | 33 |
| BsuRI | GGCC | 3 cut(s) | 39, 480, 1498 |
| BsuTUI | ATCGAT | 1 cut(s) | 33 |
| BtgI | CCRYGG | 2 cut(s) | 40, 1252 |
| BtrI | CACGTC | 1 cut(s) | 1070 |
| BtsCI | GGATG | 6 cut(s) | 88, 205, 1262, 1297, 1425, 1534 |
| BtsI | GCAGTG | 2 cut(s) | 151, 301 |
| BtsIMutI | CAGTG | 4 cut(s) | 151, 301, 628, 1224 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1268, 1346 |
| CfoI | GCGC | 5 cut(s) | 358, 1483, 1553, 1817, 1850 |
| Cfr10I | RCCGGY | 5 cut(s) | 1613, 1646, 1679, 1712, 1745 |
| Cfr13I | GGNCC | 3 cut(s) | 134, 473, 1496 |
| ClaI | ATCGAT | 1 cut(s) | 33 |
| CseI | GACGC | 1 cut(s) | 7 |
| Csp6I | GTAC | 5 cut(s) | 506, 612, 1036, 1114, 1260 |
| CviAII | CATG | 5 cut(s) | 130, 320, 605, 1253, 1337 |
| CviQI | GTAC | 5 cut(s) | 506, 612, 1036, 1114, 1260 |
| DdeI | CTNAG | 8 cut(s) | 138, 437, 620, 798, 1227, 1316, 1401, 1484 |
| DpnI | GATC | 3 cut(s) | 65, 840, 1127 |
| DpnII | GATC | 3 cut(s) | 63, 838, 1125 |
| DraI | TTTAAA | 1 cut(s) | 1153 |
| EaeI | YGGCCR | 2 cut(s) | 37, 478 |
| EagI | CGGCCG | 1 cut(s) | 478 |
| Eam1104I | CTCTTC | 2 cut(s) | 146, 1434 |
| EarI | CTCTTC | 2 cut(s) | 146, 1434 |
| EclXI | CGGCCG | 1 cut(s) | 478 |
| Eco130I | CCWWGG | 1 cut(s) | 1252 |
| Eco24I | GRGCYC | 1 cut(s) | 317 |
| Eco31I | GGTCTC | 2 cut(s) | 518, 1022 |
| Eco47I | GGWCC | 2 cut(s) | 134, 473 |
| Eco52I | CGGCCG | 1 cut(s) | 478 |
| Eco88I | CYCGRG | 1 cut(s) | 778 |
| EcoO109I | RGGNCCY | 1 cut(s) | 134 |
| EcoRI | GAATTC | 1 cut(s) | 47 |
| EcoRII | CCWGG | 1 cut(s) | 834 |
| EcoT14I | CCWWGG | 1 cut(s) | 1252 |
| EcoT22I | ATGCAT | 1 cut(s) | 1210 |
| EcoT38I | GRGCYC | 1 cut(s) | 317 |
| ErhI | CCWWGG | 1 cut(s) | 1252 |
| FaeI | CATG | 5 cut(s) | 133, 323, 608, 1256, 1340 |
| FaqI | GGGAC | 4 cut(s) | 459, 593, 755, 1347 |
| FatI | CATG | 5 cut(s) | 129, 319, 604, 1252, 1336 |
| FbaI | TGATCA | 1 cut(s) | 1125 |
| FokI | GGATG | 6 cut(s) | 95, 212, 1269, 1304, 1432, 1541 |
| FriOI | GRGCYC | 1 cut(s) | 317 |
| FspBI | CTAG | 1 cut(s) | 998 |
| GlaI | GCGC | 5 cut(s) | 357, 1482, 1552, 1816, 1849 |
| GsaI | CCCAGC | 1 cut(s) | 1112 |
| HaeII | RGCGCY | 3 cut(s) | 1484, 1554, 1818 |
| HaeIII | GGCC | 3 cut(s) | 39, 480, 1498 |
| HapII | CCGG | 9 cut(s) | 210, 477, 734, 1614, 1647, 1680, 1713, 1746, 1779 |
| HgaI | GACGC | 1 cut(s) | 7 |
| HhaI | GCGC | 5 cut(s) | 358, 1483, 1553, 1817, 1850 |
| Hin1II | CATG | 5 cut(s) | 133, 323, 608, 1256, 1340 |
| Hin6I | GCGC | 5 cut(s) | 356, 1481, 1551, 1815, 1848 |
| HinP1I | GCGC | 5 cut(s) | 356, 1481, 1551, 1815, 1848 |
| HincII | GTYRAC | 2 cut(s) | 88, 912 |
| HindII | GTYRAC | 2 cut(s) | 88, 912 |
| HindIII | AAGCTT | 1 cut(s) | 1430 |
| HinfI | GANTC | 4 cut(s) | 107, 1001, 1229, 1378 |
| HpaII | CCGG | 9 cut(s) | 210, 477, 734, 1614, 1647, 1680, 1713, 1746, 1779 |
| HphI | GGTGA | 4 cut(s) | 56, 723, 764, 989 |
| Hpy166II | GTNNAC | 6 cut(s) | 88, 614, 667, 912, 1105, 1116 |
| Hpy188I | TCNGA | 6 cut(s) | 141, 370, 591, 1145, 1218, 1324 |
| Hpy188III | TCNNGA | 5 cut(s) | 334, 521, 780, 923, 998 |
| Hpy8I | GTNNAC | 6 cut(s) | 88, 614, 667, 912, 1105, 1116 |
| Hpy99I | CGWCG | 9 cut(s) | 284, 1071, 1613, 1679, 1712, 1745, 1811, 1844, 1877 |
| HpyAV | CCTTC | 7 cut(s) | 207, 538, 731, 855, 886, 962, 1387 |
| HpyCH4III | ACNGT | 2 cut(s) | 445, 1051 |
| HpyCH4IV | ACGT | 8 cut(s) | 491, 508, 870, 1069, 1074, 1138, 1148, 1888 |
| HpyF3I | CTNAG | 8 cut(s) | 138, 437, 620, 798, 1227, 1316, 1401, 1484 |
| HpySE526I | ACGT | 8 cut(s) | 491, 508, 870, 1069, 1074, 1138, 1148, 1888 |
| Hsp92II | CATG | 5 cut(s) | 133, 323, 608, 1256, 1340 |
| HspAI | GCGC | 5 cut(s) | 356, 1481, 1551, 1815, 1848 |
| KroI | GCCGGC | 5 cut(s) | 1613, 1646, 1679, 1712, 1745 |
| KroNI | GCCGGC | 5 cut(s) | 1615, 1648, 1681, 1714, 1747 |
| Ksp22I | TGATCA | 1 cut(s) | 1125 |
| Kzo9I | GATC | 3 cut(s) | 63, 838, 1125 |
| LguI | GCTCTTC | 2 cut(s) | 146, 1434 |
| Lsp1109I | GCAGC | 8 cut(s) | 2, 82, 406, 721, 1255, 1577, 1804, 1862 |
| LweI | GCATC | 5 cut(s) | 405, 1195, 1217, 1255, 1270 |
| MaeI | CTAG | 1 cut(s) | 998 |
| MaeII | ACGT | 8 cut(s) | 491, 508, 870, 1069, 1074, 1138, 1148, 1888 |
| MaeIII | GTNAC | 5 cut(s) | 19, 296, 492, 752, 1070 |
| MalI | GATC | 3 cut(s) | 65, 840, 1127 |
| MboI | GATC | 3 cut(s) | 63, 838, 1125 |
| MflI | RGATCY | 1 cut(s) | 838 |
| MhlI | GDGCHC | 5 cut(s) | 158, 317, 349, 799, 1107 |
| MlyI | GAGTC | 2 cut(s) | 1010, 1238 |
| MmeI | TCCRAC | 1 cut(s) | 1492 |
| Mph1103I | ATGCAT | 1 cut(s) | 1210 |
| MreI | CGCCGGCG | 4 cut(s) | 1613, 1679, 1712, 1745 |
| MroNI | GCCGGC | 5 cut(s) | 1613, 1646, 1679, 1712, 1745 |
| MseI | TTAA | 4 cut(s) | 567, 1011, 1152, 1248 |
| MslI | CAYNNNNRTG | 2 cut(s) | 161, 621 |
| MspA1I | CMGCKG | 3 cut(s) | 712, 1465, 1853 |
| MspI | CCGG | 9 cut(s) | 210, 477, 734, 1614, 1647, 1680, 1713, 1746, 1779 |
| MspR9I | CCNGG | 2 cut(s) | 477, 836 |
| Mva1269I | GAATGC | 1 cut(s) | 329 |
| MvaI | CCWGG | 1 cut(s) | 836 |
| NaeI | GCCGGC | 5 cut(s) | 1615, 1648, 1681, 1714, 1747 |
| NciI | CCSGG | 1 cut(s) | 477 |
| NcoI | CCATGG | 1 cut(s) | 1252 |
| NdeII | GATC | 3 cut(s) | 63, 838, 1125 |
| NgoMIV | GCCGGC | 5 cut(s) | 1613, 1646, 1679, 1712, 1745 |
| NlaIII | CATG | 5 cut(s) | 133, 323, 608, 1256, 1340 |
| NlaIV | GGNNCC | 4 cut(s) | 135, 218, 475, 1497 |
| NmuCI | GTSAC | 4 cut(s) | 19, 296, 752, 1070 |
| NsiI | ATGCAT | 1 cut(s) | 1210 |
| NspI | RCATGY | 1 cut(s) | 1340 |
| NspV | TTCGAA | 1 cut(s) | 1359 |
| PciSI | GCTCTTC | 2 cut(s) | 146, 1434 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1680, 1713 |
| PctI | GAATGC | 1 cut(s) | 329 |
| PdiI | GCCGGC | 5 cut(s) | 1615, 1648, 1681, 1714, 1747 |
| PfeI | GAWTC | 2 cut(s) | 107, 1378 |
| PleI | GAGTC | 2 cut(s) | 1009, 1237 |
| PpsI | GAGTC | 2 cut(s) | 1009, 1237 |
| Ppu21I | YACGTR | 1 cut(s) | 509 |
| PpuMI | RGGWCCY | 1 cut(s) | 134 |
| PshBI | ATTAAT | 1 cut(s) | 567 |
| Psp1406I | AACGTT | 2 cut(s) | 870, 1148 |
| Psp5II | RGGWCCY | 1 cut(s) | 134 |
| Psp6I | CCWGG | 1 cut(s) | 834 |
| PspFI | CCCAGC | 1 cut(s) | 1108 |
| PspGI | CCWGG | 1 cut(s) | 834 |
| PspN4I | GGNNCC | 4 cut(s) | 135, 218, 475, 1497 |
| PspPI | GGNCC | 3 cut(s) | 134, 473, 1496 |
| PspPPI | RGGWCCY | 1 cut(s) | 134 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1268, 1346 |
| PsuI | RGATCY | 1 cut(s) | 838 |
| PvuII | CAGCTG | 2 cut(s) | 1465, 1853 |
| RsaI | GTAC | 5 cut(s) | 507, 613, 1037, 1115, 1261 |
| RsaNI | GTAC | 5 cut(s) | 506, 612, 1036, 1114, 1260 |
| RseI | CAYNNNNRTG | 2 cut(s) | 161, 621 |
| SapI | GCTCTTC | 2 cut(s) | 146, 1434 |
| SaqAI | TTAA | 4 cut(s) | 567, 1011, 1152, 1248 |
| Sau3AI | GATC | 3 cut(s) | 63, 838, 1125 |
| Sau96I | GGNCC | 3 cut(s) | 134, 473, 1496 |
| ScaI | AGTACT | 1 cut(s) | 1037 |
| SchI | GAGTC | 2 cut(s) | 1010, 1238 |
| ScrFI | CCNGG | 2 cut(s) | 477, 836 |
| SduI | GDGCHC | 5 cut(s) | 158, 317, 349, 799, 1107 |
| SfaNI | GCATC | 5 cut(s) | 405, 1195, 1217, 1255, 1270 |
| SfuI | TTCGAA | 1 cut(s) | 1359 |
| SgrAI | CRCCGGYG | 4 cut(s) | 1613, 1679, 1712, 1745 |
| SinI | GGWCC | 2 cut(s) | 134, 473 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 161, 621 |
| SmlI | CTYRAG | 1 cut(s) | 1382 |
| SmoI | CTYRAG | 1 cut(s) | 1382 |
| SsiI | CCGC | 3 cut(s) | 712, 1581, 1812 |
| SspMI | CTAG | 1 cut(s) | 998 |
| StyD4I | CCNGG | 2 cut(s) | 475, 834 |
| StyI | CCWWGG | 1 cut(s) | 1252 |
| TaaI | ACNGT | 2 cut(s) | 445, 1051 |
| TaiI | ACGT | 8 cut(s) | 494, 511, 873, 1072, 1077, 1141, 1151, 1891 |
| TaqI | TCGA | 8 cut(s) | 33, 66, 282, 333, 399, 1306, 1359, 1824 |
| TatI | WGTACW | 3 cut(s) | 611, 1035, 1259 |
| TauI | GCSGC | 2 cut(s) | 1584, 1815 |
| TfiI | GAWTC | 2 cut(s) | 107, 1378 |
| Tru1I | TTAA | 4 cut(s) | 567, 1011, 1152, 1248 |
| Tru9I | TTAA | 4 cut(s) | 567, 1011, 1152, 1248 |
| TscAI | CASTG | 4 cut(s) | 151, 301, 628, 1231 |
| TseFI | GTSAC | 4 cut(s) | 19, 296, 752, 1070 |
| TseI | GCWGC | 8 cut(s) | 15, 95, 419, 709, 1268, 1565, 1817, 1850 |
| Tsp45I | GTSAC | 4 cut(s) | 19, 296, 752, 1070 |
| TspDTI | ATGAA | 2 cut(s) | 179, 621 |
| TspGWI | ACGGA | 1 cut(s) | 1342 |
| TspRI | CASTG | 4 cut(s) | 151, 301, 628, 1231 |
| VneI | GTGCAC | 1 cut(s) | 1103 |
| VpaK11BI | GGWCC | 2 cut(s) | 134, 473 |
| VspI | ATTAAT | 1 cut(s) | 567 |
| XapI | RAATTY | 2 cut(s) | 47, 516 |
| XbaI | TCTAGA | 1 cut(s) | 997 |
| XceI | RCATGY | 1 cut(s) | 1340 |
| XspI | CTAG | 1 cut(s) | 998 |
| ZrmI | AGTACT | 1 cut(s) | 1037 |
| Zsp2I | ATGCAT | 1 cut(s) | 1210 |