Protein ROOT HAIR DEFECTIVE 3 homolog
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 731 |
| Acc36I | ACCTGC | 1 cut(s) | 731 |
| AccI | GTMKAC | 1 cut(s) | 785 |
| AccII | CGCG | 1 cut(s) | 671 |
| AciI | CCGC | 3 cut(s) | 102, 147, 976 |
| AclI | AACGTT | 1 cut(s) | 864 |
| AclWI | GGATC | 1 cut(s) | 757 |
| AcoI | YGGCCR | 2 cut(s) | 243, 769 |
| AcsI | RAATTY | 4 cut(s) | 185, 659, 776, 1151 |
| AcuI | CTGAAG | 2 cut(s) | 572, 1245 |
| AfaI | GTAC | 7 cut(s) | 472, 549, 960, 1063, 1109, 1222, 1265 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 616, 772, 916 |
| AflIII | ACRYGT | 1 cut(s) | 940 |
| AgsI | TTSAA | 4 cut(s) | 52, 166, 928, 934 |
| AjiI | CACGTC | 1 cut(s) | 542 |
| AjnI | CCWGG | 2 cut(s) | 315, 766 |
| AluBI | AGCT | 5 cut(s) | 91, 341, 984, 1414, 1481 |
| AluI | AGCT | 5 cut(s) | 91, 341, 984, 1414, 1481 |
| Alw21I | GWGCWC | 1 cut(s) | 158 |
| AlwI | GGATC | 1 cut(s) | 757 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 829 |
| AoxI | GGCC | 3 cut(s) | 243, 313, 769 |
| ApeKI | GCWGC | 4 cut(s) | 341, 416, 703, 1229 |
| ApoI | RAATTY | 4 cut(s) | 185, 659, 776, 1151 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 579, 1200, 1415 |
| AspLEI | GCGC | 2 cut(s) | 355, 909 |
| AspS9I | GGNCC | 2 cut(s) | 134, 1024 |
| AsuC2I | CCSGG | 1 cut(s) | 773 |
| AsuHPI | GGTGA | 3 cut(s) | 598, 862, 1270 |
| AsuII | TTCGAA | 1 cut(s) | 1372 |
| AsuNHI | GCTAGC | 1 cut(s) | 355 |
| AvaII | GGWCC | 2 cut(s) | 134, 1024 |
| Bbv12I | GWGCWC | 1 cut(s) | 158 |
| BbvI | GCAGC | 4 cut(s) | 328, 403, 715, 1241 |
| BccI | CCATC | 3 cut(s) | 35, 177, 293 |
| BceAI | ACGGC | 1 cut(s) | 462 |
| BciT130I | CCWGG | 2 cut(s) | 317, 768 |
| BciVI | GTATCC | 2 cut(s) | 313, 613 |
| BcnI | CCSGG | 1 cut(s) | 773 |
| BfaI | CTAG | 3 cut(s) | 356, 896, 1478 |
| BfmI | CTRYAG | 1 cut(s) | 1494 |
| BfuAI | ACCTGC | 1 cut(s) | 731 |
| BfuI | GTATCC | 2 cut(s) | 313, 613 |
| BisI | GCNGC | 5 cut(s) | 342, 417, 704, 977, 1230 |
| BlpI | GCTNAGC | 1 cut(s) | 980 |
| BlsI | GCNGC | 5 cut(s) | 343, 418, 705, 978, 1231 |
| BmcAI | AGTACT | 1 cut(s) | 1265 |
| Bme1390I | CCNGG | 3 cut(s) | 317, 768, 773 |
| Bme18I | GGWCC | 2 cut(s) | 134, 1024 |
| BmgBI | CACGTC | 1 cut(s) | 542 |
| BmgT120I | GGNCC | 2 cut(s) | 134, 1024 |
| BmiI | GGNNCC | 2 cut(s) | 135, 1311 |
| BmrFI | CCNGG | 3 cut(s) | 317, 768, 773 |
| BmrI | ACTGGG | 1 cut(s) | 1351 |
| BmsI | GCATC | 3 cut(s) | 1336, 1358, 1496 |
| BmtI | GCTAGC | 1 cut(s) | 359 |
| BmuI | ACTGGG | 1 cut(s) | 1351 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 980 |
| Bpu14I | TTCGAA | 1 cut(s) | 1372 |
| BpuEI | CTTGAG | 2 cut(s) | 718, 830 |
| BpuMI | CCSGG | 1 cut(s) | 773 |
| BsaAI | YACGTR | 1 cut(s) | 506 |
| BsaJI | CCNNGG | 1 cut(s) | 766 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 616, 772, 916 |
| Bse1I | ACTGG | 1 cut(s) | 1346 |
| BseBI | CCWGG | 2 cut(s) | 317, 768 |
| BseDI | CCNNGG | 1 cut(s) | 766 |
| BseGI | GGATG | 3 cut(s) | 1096, 1351, 1368 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 616, 772, 916 |
| BseMII | CTCAG | 5 cut(s) | 87, 152, 425, 994, 1281 |
| BseNI | ACTGG | 1 cut(s) | 1346 |
| BseRI | GAGGAG | 1 cut(s) | 698 |
| BseXI | GCAGC | 4 cut(s) | 328, 403, 715, 1241 |
| BseYI | CCCAGC | 1 cut(s) | 1481 |
| Bsh1236I | CGCG | 1 cut(s) | 671 |
| BshFI | GGCC | 3 cut(s) | 245, 315, 771 |
| BsiHKAI | GWGCWC | 1 cut(s) | 158 |
| BsiSI | CCGG | 1 cut(s) | 772 |
| BsiWI | CGTACG | 1 cut(s) | 1107 |
| BslFI | GGGAC | 1 cut(s) | 147 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 616, 772, 916 |
| BsmFI | GGGAC | 1 cut(s) | 147 |
| BsmI | GAATGC | 2 cut(s) | 205, 418 |
| BsnI | GGCC | 3 cut(s) | 245, 315, 771 |
| Bsp119I | TTCGAA | 1 cut(s) | 1372 |
| Bsp1286I | GDGCHC | 1 cut(s) | 158 |
| Bsp1407I | TGTACA | 1 cut(s) | 958 |
| Bsp143I | GATC | 4 cut(s) | 10, 762, 898, 1044 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 980 |
| BspACI | CCGC | 3 cut(s) | 102, 147, 976 |
| BspANI | GGCC | 3 cut(s) | 245, 315, 771 |
| BspCNI | CTCAG | 5 cut(s) | 88, 151, 426, 993, 1280 |
| BspFNI | CGCG | 1 cut(s) | 671 |
| BspHI | TCATGA | 1 cut(s) | 1407 |
| BspLI | GGNNCC | 2 cut(s) | 135, 1311 |
| BspMI | ACCTGC | 1 cut(s) | 731 |
| BspOI | GCTAGC | 1 cut(s) | 359 |
| BspPI | GGATC | 1 cut(s) | 757 |
| BspQI | GCTCTTC | 1 cut(s) | 146 |
| BspT104I | TTCGAA | 1 cut(s) | 1372 |
| BsrGI | TGTACA | 1 cut(s) | 958 |
| BsrI | ACTGG | 1 cut(s) | 1346 |
| BssECI | CCNNGG | 1 cut(s) | 766 |
| BssMI | GATC | 4 cut(s) | 10, 762, 898, 1044 |
| Bst2UI | CCWGG | 2 cut(s) | 317, 768 |
| Bst4CI | ACNGT | 2 cut(s) | 442, 1427 |
| Bst6I | CTCTTC | 1 cut(s) | 146 |
| BstAUI | TGTACA | 1 cut(s) | 958 |
| BstBAI | YACGTR | 1 cut(s) | 506 |
| BstBI | TTCGAA | 1 cut(s) | 1372 |
| BstC8I | GCNNGC | 5 cut(s) | 93, 243, 357, 390, 738 |
| BstDEI | CTNAG | 5 cut(s) | 96, 138, 434, 980, 1267 |
| BstF5I | GGATG | 3 cut(s) | 1096, 1351, 1368 |
| BstFNI | CGCG | 1 cut(s) | 671 |
| BstHHI | GCGC | 2 cut(s) | 355, 909 |
| BstKTI | GATC | 4 cut(s) | 13, 765, 901, 1047 |
| BstMBI | GATC | 4 cut(s) | 10, 762, 898, 1044 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 88, 153, 300, 350, 1478 |
| BstNI | CCWGG | 2 cut(s) | 317, 768 |
| BstNSI | RCATGY | 1 cut(s) | 1394 |
| BstSCI | CCNGG | 3 cut(s) | 315, 766, 771 |
| BstSFI | CTRYAG | 1 cut(s) | 1494 |
| BstUI | CGCG | 1 cut(s) | 671 |
| BstV1I | GCAGC | 4 cut(s) | 328, 403, 715, 1241 |
| BsuI | GTATCC | 2 cut(s) | 313, 613 |
| BsuRI | GGCC | 3 cut(s) | 245, 315, 771 |
| BtrI | CACGTC | 1 cut(s) | 542 |
| BtsCI | GGATG | 3 cut(s) | 1096, 1351, 1368 |
| BtsIMutI | CAGTG | 2 cut(s) | 1295, 1339 |
| BveI | ACCTGC | 1 cut(s) | 731 |
| Cac8I | GCNNGC | 5 cut(s) | 93, 243, 357, 390, 738 |
| CaiI | CAGNNNCTG | 1 cut(s) | 829 |
| CciI | TCATGA | 1 cut(s) | 1407 |
| CfoI | GCGC | 2 cut(s) | 355, 909 |
| Cfr13I | GGNCC | 2 cut(s) | 134, 1024 |
| Csp6I | GTAC | 7 cut(s) | 471, 548, 959, 1062, 1108, 1221, 1264 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 782, 817 |
| CviAII | CATG | 7 cut(s) | 22, 280, 454, 1117, 1391, 1408, 1420 |
| CviQI | GTAC | 7 cut(s) | 471, 548, 959, 1062, 1108, 1221, 1264 |
| DdeI | CTNAG | 5 cut(s) | 96, 138, 434, 980, 1267 |
| DpnI | GATC | 4 cut(s) | 12, 764, 900, 1046 |
| DpnII | GATC | 4 cut(s) | 10, 762, 898, 1044 |
| DraI | TTTAAA | 1 cut(s) | 1156 |
| EaeI | YGGCCR | 2 cut(s) | 243, 769 |
| Eam1104I | CTCTTC | 1 cut(s) | 146 |
| EarI | CTCTTC | 1 cut(s) | 146 |
| Eco47I | GGWCC | 2 cut(s) | 134, 1024 |
| Eco57I | CTGAAG | 2 cut(s) | 572, 1245 |
| EcoO109I | RGGNCCY | 1 cut(s) | 134 |
| EcoRII | CCWGG | 2 cut(s) | 315, 766 |
| EcoT22I | ATGCAT | 1 cut(s) | 1351 |
| FaeI | CATG | 7 cut(s) | 25, 283, 457, 1120, 1394, 1411, 1423 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 75, 107, 720, 752 |
| FaqI | GGGAC | 1 cut(s) | 147 |
| FatI | CATG | 7 cut(s) | 21, 279, 453, 1116, 1390, 1407, 1419 |
| FauI | CCCGC | 1 cut(s) | 140 |
| FblI | GTMKAC | 1 cut(s) | 785 |
| Fnu4HI | GCNGC | 5 cut(s) | 342, 417, 704, 977, 1230 |
| FokI | GGATG | 3 cut(s) | 1103, 1358, 1375 |
| Fsp4HI | GCNGC | 5 cut(s) | 342, 417, 704, 977, 1230 |
| FspBI | CTAG | 3 cut(s) | 356, 896, 1478 |
| GlaI | GCGC | 2 cut(s) | 354, 908 |
| GluI | GCNGC | 5 cut(s) | 342, 417, 704, 977, 1230 |
| GsaI | CCCAGC | 1 cut(s) | 1485 |
| HaeIII | GGCC | 3 cut(s) | 245, 315, 771 |
| HapII | CCGG | 1 cut(s) | 772 |
| HhaI | GCGC | 2 cut(s) | 355, 909 |
| Hin1II | CATG | 7 cut(s) | 25, 283, 457, 1120, 1394, 1411, 1423 |
| Hin6I | GCGC | 2 cut(s) | 353, 907 |
| HinP1I | GCGC | 2 cut(s) | 353, 907 |
| HindIII | AAGCTT | 1 cut(s) | 89 |
| HinfI | GANTC | 8 cut(s) | 18, 105, 520, 595, 612, 716, 832, 913 |
| HpaII | CCGG | 1 cut(s) | 772 |
| HphI | GGTGA | 3 cut(s) | 598, 862, 1270 |
| Hpy166II | GTNNAC | 4 cut(s) | 602, 786, 1099, 1339 |
| Hpy188I | TCNGA | 9 cut(s) | 141, 367, 483, 585, 666, 825, 1009, 1240, 1362 |
| Hpy188III | TCNNGA | 6 cut(s) | 65, 680, 839, 917, 1048, 1408 |
| Hpy8I | GTNNAC | 4 cut(s) | 602, 786, 1099, 1339 |
| Hpy99I | CGWCG | 3 cut(s) | 38, 490, 543 |
| HpyAV | CCTTC | 4 cut(s) | 203, 276, 547, 722 |
| HpyCH4III | ACNGT | 2 cut(s) | 442, 1427 |
| HpyCH4IV | ACGT | 6 cut(s) | 488, 505, 541, 864, 940, 1060 |
| HpyCH4V | TGCA | 9 cut(s) | 25, 203, 326, 388, 460, 740, 953, 1349, 1394 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 88, 153, 300, 350, 1478 |
| HpyF3I | CTNAG | 5 cut(s) | 96, 138, 434, 980, 1267 |
| HpySE526I | ACGT | 6 cut(s) | 488, 505, 541, 864, 940, 1060 |
| Hsp92II | CATG | 7 cut(s) | 25, 283, 457, 1120, 1394, 1411, 1423 |
| HspAI | GCGC | 2 cut(s) | 353, 907 |
| Kzo9I | GATC | 4 cut(s) | 10, 762, 898, 1044 |
| LguI | GCTCTTC | 1 cut(s) | 146 |
| LmnI | GCTCC | 1 cut(s) | 1168 |
| Lsp1109I | GCAGC | 4 cut(s) | 328, 403, 715, 1241 |
| LweI | GCATC | 3 cut(s) | 1336, 1358, 1496 |
| MaeI | CTAG | 3 cut(s) | 356, 896, 1478 |
| MaeII | ACGT | 6 cut(s) | 488, 505, 541, 864, 940, 1060 |
| MaeIII | GTNAC | 1 cut(s) | 1427 |
| MalI | GATC | 4 cut(s) | 12, 764, 900, 1046 |
| MboI | GATC | 4 cut(s) | 10, 762, 898, 1044 |
| MboII | GAAGA | 6 cut(s) | 50, 163, 225, 587, 827, 1205 |
| MhlI | GDGCHC | 1 cut(s) | 158 |
| MlyI | GAGTC | 2 cut(s) | 27, 514 |
| MmeI | TCCRAC | 2 cut(s) | 507, 885 |
| Mph1103I | ATGCAT | 1 cut(s) | 1351 |
| MroXI | GAANNNNTTC | 3 cut(s) | 579, 1200, 1415 |
| MseI | TTAA | 6 cut(s) | 261, 491, 1137, 1155, 1175, 1516 |
| MslI | CAYNNNNRTG | 4 cut(s) | 374, 393, 1344, 1361 |
| MspI | CCGG | 1 cut(s) | 772 |
| MspR9I | CCNGG | 3 cut(s) | 317, 768, 773 |
| Mva1269I | GAATGC | 2 cut(s) | 205, 418 |
| MvaI | CCWGG | 2 cut(s) | 317, 768 |
| MvnI | CGCG | 1 cut(s) | 671 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 88, 153, 300, 350, 1478 |
| NciI | CCSGG | 1 cut(s) | 773 |
| NdeII | GATC | 4 cut(s) | 10, 762, 898, 1044 |
| NheI | GCTAGC | 1 cut(s) | 355 |
| NlaIII | CATG | 7 cut(s) | 25, 283, 457, 1120, 1394, 1411, 1423 |
| NlaIV | GGNNCC | 2 cut(s) | 135, 1311 |
| NmeAIII | GCCGAG | 1 cut(s) | 271 |
| NsiI | ATGCAT | 1 cut(s) | 1351 |
| NspI | RCATGY | 1 cut(s) | 1394 |
| NspV | TTCGAA | 1 cut(s) | 1372 |
| PagI | TCATGA | 1 cut(s) | 1407 |
| PaqCI | CACCTGC | 1 cut(s) | 731 |
| PciSI | GCTCTTC | 1 cut(s) | 146 |
| PctI | GAATGC | 2 cut(s) | 205, 418 |
| PdmI | GAANNNNTTC | 3 cut(s) | 579, 1200, 1415 |
| PfeI | GAWTC | 6 cut(s) | 105, 595, 612, 716, 832, 913 |
| Pfl23II | CGTACG | 1 cut(s) | 1107 |
| PkrI | GCNGC | 5 cut(s) | 343, 418, 705, 978, 1231 |
| PleI | GAGTC | 2 cut(s) | 26, 514 |
| PpsI | GAGTC | 2 cut(s) | 26, 514 |
| Ppu21I | YACGTR | 1 cut(s) | 506 |
| PpuMI | RGGWCCY | 1 cut(s) | 134 |
| Psp1406I | AACGTT | 1 cut(s) | 864 |
| Psp5II | RGGWCCY | 1 cut(s) | 134 |
| Psp6I | CCWGG | 2 cut(s) | 315, 766 |
| PspFI | CCCAGC | 1 cut(s) | 1481 |
| PspGI | CCWGG | 2 cut(s) | 315, 766 |
| PspLI | CGTACG | 1 cut(s) | 1107 |
| PspN4I | GGNNCC | 2 cut(s) | 135, 1311 |
| PspPI | GGNCC | 2 cut(s) | 134, 1024 |
| PspPPI | RGGWCCY | 1 cut(s) | 134 |
| PstNI | CAGNNNCTG | 1 cut(s) | 829 |
| RsaI | GTAC | 7 cut(s) | 472, 549, 960, 1063, 1109, 1222, 1265 |
| RsaNI | GTAC | 7 cut(s) | 471, 548, 959, 1062, 1108, 1221, 1264 |
| RseI | CAYNNNNRTG | 4 cut(s) | 374, 393, 1344, 1361 |
| SapI | GCTCTTC | 1 cut(s) | 146 |
| SaqAI | TTAA | 6 cut(s) | 261, 491, 1137, 1155, 1175, 1516 |
| SatI | GCNGC | 5 cut(s) | 342, 417, 704, 977, 1230 |
| Sau3AI | GATC | 4 cut(s) | 10, 762, 898, 1044 |
| Sau96I | GGNCC | 2 cut(s) | 134, 1024 |
| ScaI | AGTACT | 1 cut(s) | 1265 |
| SchI | GAGTC | 2 cut(s) | 27, 514 |
| ScrFI | CCNGG | 3 cut(s) | 317, 768, 773 |
| SduI | GDGCHC | 1 cut(s) | 158 |
| SfaNI | GCATC | 3 cut(s) | 1336, 1358, 1496 |
| SfcI | CTRYAG | 1 cut(s) | 1494 |
| SfuI | TTCGAA | 1 cut(s) | 1372 |
| SinI | GGWCC | 2 cut(s) | 134, 1024 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 374, 393, 1344, 1361 |
| SmlI | CTYRAG | 2 cut(s) | 697, 845 |
| SmoI | CTYRAG | 2 cut(s) | 697, 845 |
| SsiI | CCGC | 3 cut(s) | 102, 147, 976 |
| SspI | AATATT | 1 cut(s) | 1031 |
| SspMI | CTAG | 3 cut(s) | 356, 896, 1478 |
| StyD4I | CCNGG | 3 cut(s) | 315, 766, 771 |
| TaaI | ACNGT | 2 cut(s) | 442, 1427 |
| TaiI | ACGT | 6 cut(s) | 491, 508, 544, 867, 943, 1063 |
| TaqI | TCGA | 6 cut(s) | 33, 615, 945, 1122, 1372, 1447 |
| TatI | WGTACW | 4 cut(s) | 547, 958, 1220, 1263 |
| TauI | GCSGC | 1 cut(s) | 979 |
| TfiI | GAWTC | 6 cut(s) | 105, 595, 612, 716, 832, 913 |
| Tru1I | TTAA | 6 cut(s) | 261, 491, 1137, 1155, 1175, 1516 |
| Tru9I | TTAA | 6 cut(s) | 261, 491, 1137, 1155, 1175, 1516 |
| TscAI | CASTG | 2 cut(s) | 1302, 1346 |
| TseI | GCWGC | 4 cut(s) | 341, 416, 703, 1229 |
| TspDTI | ATGAA | 6 cut(s) | 212, 1161, 1379, 1396, 1408, 1424 |
| TspGWI | ACGGA | 2 cut(s) | 513, 1121 |
| TspRI | CASTG | 2 cut(s) | 1302, 1346 |
| VpaK11BI | GGWCC | 2 cut(s) | 134, 1024 |
| XapI | RAATTY | 4 cut(s) | 185, 659, 776, 1151 |
| XceI | RCATGY | 1 cut(s) | 1394 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 277 |
| XmiI | GTMKAC | 1 cut(s) | 785 |
| XmnI | GAANNNNTTC | 3 cut(s) | 579, 1200, 1415 |
| XspI | CTAG | 3 cut(s) | 356, 896, 1478 |
| ZrmI | AGTACT | 1 cut(s) | 1265 |
| Zsp2I | ATGCAT | 1 cut(s) | 1351 |