Pre-mRNA-splicing factor ATP-dependent RNA helicase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Helicase_C | PF00271 | 594 - 721 | 2.7e-10 | Helicase conserved C-terminal domain |
| WHD_HA2 | PF04408 | 784 - 812 | 6e-10 | Helicase associated domain (HA2), winged-helix |
| HA2_C | PF21010 | 813 - 874 | 8.6e-12 | Helicase associated domain (HA2), ratchet-like |
| OB_NTP_bind | PF07717 | 932 - 1009 | 9.9e-24 | Oligonucleotide/oligosaccharide-binding (OB)-fold |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2076 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 140 |
| Acc36I | ACCTGC | 1 cut(s) | 2135 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2947 |
| AccII | CGCG | 5 cut(s) | 210, 381, 1194, 2578, 2914 |
| AclWI | GGATC | 6 cut(s) | 820, 966, 987, 1000, 2039, 2432 |
| AcoI | YGGCCR | 3 cut(s) | 1396, 1848, 1992 |
| AcsI | RAATTY | 5 cut(s) | 985, 1034, 1082, 1487, 2387 |
| AcuI | CTGAAG | 7 cut(s) | 41, 737, 753, 1953, 2164, 2297, 2355 |
| AfaI | GTAC | 4 cut(s) | 821, 1031, 2477, 2633 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 549, 2087, 2336, 2903, 2947, 3076 |
| AgeI | ACCGGT | 1 cut(s) | 415 |
| AjnI | CCWGG | 7 cut(s) | 245, 1364, 1693, 1989, 2050, 2167, 3030 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1026, 1058, 1127, 1159 |
| Alw21I | GWGCWC | 3 cut(s) | 2486, 2903, 2955 |
| Alw26I | GTCTC | 4 cut(s) | 406, 1041, 2288, 2642 |
| AlwI | GGATC | 6 cut(s) | 820, 966, 987, 1000, 2039, 2432 |
| Ama87I | CYCGRG | 2 cut(s) | 2896, 3052 |
| AoxI | GGCC | 7 cut(s) | 445, 1396, 1848, 1876, 1992, 2802, 3086 |
| ApoI | RAATTY | 5 cut(s) | 985, 1034, 1082, 1487, 2387 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 770, 802, 2131, 2163 |
| AseI | ATTAAT | 1 cut(s) | 2765 |
| AsiGI | ACCGGT | 1 cut(s) | 415 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 622, 1952, 2177 |
| AspA2I | CCTAGG | 1 cut(s) | 3140 |
| AspLEI | GCGC | 5 cut(s) | 179, 210, 2353, 2578, 2914 |
| AspS9I | GGNCC | 3 cut(s) | 1254, 3086, 3096 |
| AsuC2I | CCSGG | 4 cut(s) | 830, 1258, 2596, 2723 |
| AsuHPI | GGTGA | 6 cut(s) | 265, 1256, 1907, 2405, 2913, 3046 |
| AsuII | TTCGAA | 2 cut(s) | 185, 3059 |
| AsuNHI | GCTAGC | 1 cut(s) | 2908 |
| AvaI | CYCGRG | 2 cut(s) | 2896, 3052 |
| AvaII | GGWCC | 2 cut(s) | 1254, 3096 |
| AvrII | CCTAGG | 1 cut(s) | 3140 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 620, 653 |
| BalI | TGGCCA | 1 cut(s) | 1994 |
| BamHI | GGATCC | 1 cut(s) | 992 |
| BanII | GRGCYC | 2 cut(s) | 1962, 2903 |
| BbsI | GAAGAC | 3 cut(s) | 741, 1174, 1874 |
| Bbv12I | GWGCWC | 3 cut(s) | 2486, 2903, 2955 |
| BceAI | ACGGC | 3 cut(s) | 445, 1352, 2753 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 1995, 2029, 2248, 2282, 2986, 3020 |
| BciT130I | CCWGG | 7 cut(s) | 247, 1366, 1695, 1991, 2052, 2169, 3032 |
| BciVI | GTATCC | 2 cut(s) | 1292, 2300 |
| BclI | TGATCA | 3 cut(s) | 487, 844, 862 |
| BcnI | CCSGG | 4 cut(s) | 830, 1258, 2596, 2723 |
| BcoDI | GTCTC | 4 cut(s) | 406, 1041, 2288, 2642 |
| BfaI | CTAG | 6 cut(s) | 201, 794, 1977, 2372, 2909, 3141 |
| BfmI | CTRYAG | 3 cut(s) | 263, 1154, 1516 |
| BfoI | RGCGCY | 2 cut(s) | 180, 2354 |
| BfuAI | ACCTGC | 1 cut(s) | 2135 |
| BfuI | GTATCC | 2 cut(s) | 1292, 2300 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3001 |
| BlnI | CCTAGG | 1 cut(s) | 3140 |
| BlpI | GCTNAGC | 1 cut(s) | 102 |
| Bme18I | GGWCC | 2 cut(s) | 1254, 3096 |
| BmeT110I | CYCGRG | 2 cut(s) | 2896, 3052 |
| BmgT120I | GGNCC | 3 cut(s) | 1254, 3086, 3096 |
| BmiI | GGNNCC | 4 cut(s) | 994, 1255, 1734, 3018 |
| BmrI | ACTGGG | 2 cut(s) | 1260, 2097 |
| BmsI | GCATC | 9 cut(s) | 523, 1079, 1313, 1633, 1714, 1744, 2135, 2311, 2819 |
| BmtI | GCTAGC | 1 cut(s) | 2912 |
| BmuI | ACTGGG | 2 cut(s) | 1260, 2097 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2405 |
| BpiI | GAAGAC | 3 cut(s) | 741, 1174, 1874 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1377, 1409 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2902 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 102 |
| Bpu14I | TTCGAA | 2 cut(s) | 185, 3059 |
| BpuEI | CTTGAG | 3 cut(s) | 766, 1359, 1612 |
| BpuMI | CCSGG | 4 cut(s) | 830, 1258, 2596, 2723 |
| BsaI | GGTCTC | 2 cut(s) | 406, 1041 |
| BsaJI | CCNNGG | 8 cut(s) | 1334, 1365, 1879, 2050, 2081, 2167, 2168, 3140 |
| BsaWI | WCCGGW | 2 cut(s) | 415, 2813 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2598, 2628 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 549, 2087, 2336, 2903, 2947, 3076 |
| Bse118I | RCCGGY | 1 cut(s) | 415 |
| Bse1I | ACTGG | 4 cut(s) | 1178, 1255, 1828, 2092 |
| Bse3DI | GCAATG | 5 cut(s) | 479, 820, 1590, 2099, 2805 |
| BseBI | CCWGG | 7 cut(s) | 247, 1366, 1695, 1991, 2052, 2169, 3032 |
| BseDI | CCNNGG | 8 cut(s) | 1334, 1365, 1879, 2050, 2081, 2167, 2168, 3140 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 549, 2087, 2336, 2903, 2947, 3076 |
| BseMI | GCAATG | 5 cut(s) | 479, 820, 1590, 2099, 2805 |
| BseMII | CTCAG | 3 cut(s) | 1926, 2544, 2916 |
| BseNI | ACTGG | 4 cut(s) | 1178, 1255, 1828, 2092 |
| BseRI | GAGGAG | 5 cut(s) | 518, 1175, 1610, 2710, 3092 |
| BseX3I | CGGCCG | 1 cut(s) | 1848 |
| BseYI | CCCAGC | 1 cut(s) | 2205 |
| BsgI | GTGCAG | 1 cut(s) | 1755 |
| Bsh1236I | CGCG | 5 cut(s) | 210, 381, 1194, 2578, 2914 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1851 |
| BshFI | GGCC | 7 cut(s) | 447, 1398, 1850, 1878, 1994, 2804, 3088 |
| BshTI | ACCGGT | 1 cut(s) | 415 |
| BsiEI | CGRYCG | 1 cut(s) | 1851 |
| BsiHKAI | GWGCWC | 3 cut(s) | 2486, 2903, 2955 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2896, 3052 |
| BsiSI | CCGG | 8 cut(s) | 119, 416, 830, 1257, 2469, 2595, 2722, 2814 |
| BslFI | GGGAC | 2 cut(s) | 1896, 1897 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 549, 2087, 2336, 2903, 2947, 3076 |
| BsmAI | GTCTC | 4 cut(s) | 406, 1041, 2288, 2642 |
| BsmFI | GGGAC | 2 cut(s) | 1896, 1897 |
| BsnI | GGCC | 7 cut(s) | 447, 1398, 1850, 1878, 1994, 2804, 3088 |
| Bso31I | GGTCTC | 2 cut(s) | 406, 1041 |
| BsoBI | CYCGRG | 2 cut(s) | 2896, 3052 |
| Bsp119I | TTCGAA | 2 cut(s) | 185, 3059 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1962, 2486, 2903, 2955 |
| Bsp1407I | TGTACA | 1 cut(s) | 2631 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 102 |
| Bsp68I | TCGCGA | 2 cut(s) | 381, 1194 |
| BspANI | GGCC | 7 cut(s) | 447, 1398, 1850, 1878, 1994, 2804, 3088 |
| BspCNI | CTCAG | 3 cut(s) | 1927, 2543, 2915 |
| BspFNI | CGCG | 5 cut(s) | 210, 381, 1194, 2578, 2914 |
| BspLI | GGNNCC | 4 cut(s) | 994, 1255, 1734, 3018 |
| BspMAI | CTGCAG | 2 cut(s) | 267, 1158 |
| BspMI | ACCTGC | 1 cut(s) | 2135 |
| BspOI | GCTAGC | 1 cut(s) | 2912 |
| BspPI | GGATC | 6 cut(s) | 820, 966, 987, 1000, 2039, 2432 |
| BspQI | GCTCTTC | 1 cut(s) | 3056 |
| BspT104I | TTCGAA | 2 cut(s) | 185, 3059 |
| BspTNI | GGTCTC | 2 cut(s) | 406, 1041 |
| BsrDI | GCAATG | 5 cut(s) | 479, 820, 1590, 2099, 2805 |
| BsrFI | RCCGGY | 1 cut(s) | 415 |
| BsrGI | TGTACA | 1 cut(s) | 2631 |
| BsrI | ACTGG | 4 cut(s) | 1178, 1255, 1828, 2092 |
| BssAI | RCCGGY | 1 cut(s) | 415 |
| BssECI | CCNNGG | 8 cut(s) | 1334, 1365, 1879, 2050, 2081, 2167, 2168, 3140 |
| BssT1I | CCWWGG | 2 cut(s) | 1879, 3140 |
| Bst2UI | CCWGG | 7 cut(s) | 247, 1366, 1695, 1991, 2052, 2169, 3032 |
| Bst4CI | ACNGT | 4 cut(s) | 342, 740, 1450, 2201 |
| Bst6I | CTCTTC | 6 cut(s) | 227, 344, 402, 613, 2063, 3056 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 392, 1763 |
| BstAUI | TGTACA | 1 cut(s) | 2631 |
| BstBI | TTCGAA | 2 cut(s) | 185, 3059 |
| BstC8I | GCNNGC | 8 cut(s) | 108, 1101, 1328, 1513, 1944, 2836, 2910, 3086 |
| BstDEI | CTNAG | 7 cut(s) | 102, 1647, 1935, 2403, 2451, 2530, 2902 |
| BstDSI | CCRYGG | 1 cut(s) | 1334 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 2334, 3074 |
| BstFNI | CGCG | 5 cut(s) | 210, 381, 1194, 2578, 2914 |
| BstH2I | RGCGCY | 2 cut(s) | 180, 2354 |
| BstHHI | GCGC | 5 cut(s) | 179, 210, 2353, 2578, 2914 |
| BstMAI | GTCTC | 4 cut(s) | 406, 1041, 2288, 2642 |
| BstMCI | CGRYCG | 1 cut(s) | 1851 |
| BstNI | CCWGG | 7 cut(s) | 247, 1366, 1695, 1991, 2052, 2169, 3032 |
| BstNSI | RCATGY | 1 cut(s) | 3044 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2405 |
| BstSFI | CTRYAG | 3 cut(s) | 263, 1154, 1516 |
| BstUI | CGCG | 5 cut(s) | 210, 381, 1194, 2578, 2914 |
| BstV2I | GAAGAC | 3 cut(s) | 741, 1174, 1874 |
| BstX2I | RGATCY | 1 cut(s) | 992 |
| BstYI | RGATCY | 1 cut(s) | 992 |
| BstZI | CGGCCG | 1 cut(s) | 1848 |
| BsuI | GTATCC | 2 cut(s) | 1292, 2300 |
| BsuRI | GGCC | 7 cut(s) | 447, 1398, 1850, 1878, 1994, 2804, 3088 |
| BtgI | CCRYGG | 1 cut(s) | 1334 |
| BtgZI | GCGATG | 2 cut(s) | 99, 1209 |
| BtsIMutI | CAGTG | 2 cut(s) | 795, 1821 |
| BtuMI | TCGCGA | 2 cut(s) | 381, 1194 |
| BveI | ACCTGC | 1 cut(s) | 2135 |
| Cac8I | GCNNGC | 8 cut(s) | 108, 1101, 1328, 1513, 1944, 2836, 2910, 3086 |
| CfoI | GCGC | 5 cut(s) | 179, 210, 2353, 2578, 2914 |
| Cfr10I | RCCGGY | 1 cut(s) | 415 |
| Cfr13I | GGNCC | 3 cut(s) | 1254, 3086, 3096 |
| CsiI | ACCWGGT | 1 cut(s) | 3030 |
| Csp6I | GTAC | 4 cut(s) | 820, 1030, 2476, 2632 |
| CspAI | ACCGGT | 1 cut(s) | 415 |
| CviQI | GTAC | 4 cut(s) | 820, 1030, 2476, 2632 |
| DdeI | CTNAG | 7 cut(s) | 102, 1647, 1935, 2403, 2451, 2530, 2902 |
| DraI | TTTAAA | 1 cut(s) | 1615 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 140 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 140 |
| EaeI | YGGCCR | 3 cut(s) | 1396, 1848, 1992 |
| EagI | CGGCCG | 1 cut(s) | 1848 |
| Eam1104I | CTCTTC | 6 cut(s) | 227, 344, 402, 613, 2063, 3056 |
| EarI | CTCTTC | 6 cut(s) | 227, 344, 402, 613, 2063, 3056 |
| EciI | GGCGGA | 2 cut(s) | 930, 2531 |
| Ecl136II | GAGCTC | 1 cut(s) | 2901 |
| EclXI | CGGCCG | 1 cut(s) | 1848 |
| Eco130I | CCWWGG | 2 cut(s) | 1879, 3140 |
| Eco147I | AGGCCT | 1 cut(s) | 1878 |
| Eco24I | GRGCYC | 2 cut(s) | 1962, 2903 |
| Eco31I | GGTCTC | 2 cut(s) | 406, 1041 |
| Eco32I | GATATC | 2 cut(s) | 604, 2719 |
| Eco47I | GGWCC | 2 cut(s) | 1254, 3096 |
| Eco52I | CGGCCG | 1 cut(s) | 1848 |
| Eco53kI | GAGCTC | 1 cut(s) | 2901 |
| Eco57I | CTGAAG | 7 cut(s) | 41, 737, 753, 1953, 2164, 2297, 2355 |
| Eco88I | CYCGRG | 2 cut(s) | 2896, 3052 |
| EcoICRI | GAGCTC | 1 cut(s) | 2901 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 2334, 3074 |
| EcoRII | CCWGG | 7 cut(s) | 245, 1364, 1693, 1989, 2050, 2167, 3030 |
| EcoRV | GATATC | 2 cut(s) | 604, 2719 |
| EcoT14I | CCWWGG | 2 cut(s) | 1879, 3140 |
| EcoT38I | GRGCYC | 2 cut(s) | 1962, 2903 |
| ErhI | CCWWGG | 2 cut(s) | 1879, 3140 |
| FaqI | GGGAC | 2 cut(s) | 1896, 1897 |
| FauI | CCCGC | 3 cut(s) | 2742, 2907, 3077 |
| FauNDI | CATATG | 1 cut(s) | 274 |
| FbaI | TGATCA | 3 cut(s) | 487, 844, 862 |
| FriOI | GRGCYC | 2 cut(s) | 1962, 2903 |
| FspBI | CTAG | 6 cut(s) | 201, 794, 1977, 2372, 2909, 3141 |
| GlaI | GCGC | 5 cut(s) | 178, 209, 2352, 2577, 2913 |
| GsaI | CCCAGC | 1 cut(s) | 2209 |
| HaeII | RGCGCY | 2 cut(s) | 180, 2354 |
| HaeIII | GGCC | 7 cut(s) | 447, 1398, 1850, 1878, 1994, 2804, 3088 |
| HapII | CCGG | 8 cut(s) | 119, 416, 830, 1257, 2469, 2595, 2722, 2814 |
| HhaI | GCGC | 5 cut(s) | 179, 210, 2353, 2578, 2914 |
| Hin6I | GCGC | 5 cut(s) | 177, 208, 2351, 2576, 2912 |
| HinP1I | GCGC | 5 cut(s) | 177, 208, 2351, 2576, 2912 |
| HindIII | AAGCTT | 2 cut(s) | 609, 948 |
| HinfI | GANTC | 6 cut(s) | 311, 326, 1124, 1386, 2096, 2918 |
| HpaII | CCGG | 8 cut(s) | 119, 416, 830, 1257, 2469, 2595, 2722, 2814 |
| HphI | GGTGA | 6 cut(s) | 265, 1256, 1907, 2405, 2913, 3046 |
| Hpy166II | GTNNAC | 3 cut(s) | 295, 1534, 2632 |
| Hpy8I | GTNNAC | 3 cut(s) | 295, 1534, 2632 |
| Hpy99I | CGWCG | 1 cut(s) | 146 |
| HpyAV | CCTTC | 9 cut(s) | 437, 523, 1692, 1868, 1942, 1977, 2330, 2638, 2794 |
| HpyCH4III | ACNGT | 4 cut(s) | 342, 740, 1450, 2201 |
| HpyCH4IV | ACGT | 3 cut(s) | 2613, 2829, 2854 |
| HpyF3I | CTNAG | 7 cut(s) | 102, 1647, 1935, 2403, 2451, 2530, 2902 |
| HpySE526I | ACGT | 3 cut(s) | 2613, 2829, 2854 |
| HspAI | GCGC | 5 cut(s) | 177, 208, 2351, 2576, 2912 |
| Ksp22I | TGATCA | 3 cut(s) | 487, 844, 862 |
| LguI | GCTCTTC | 1 cut(s) | 3056 |
| LmnI | GCTCC | 6 cut(s) | 652, 1209, 2329, 2697, 2843, 3022 |
| LweI | GCATC | 9 cut(s) | 523, 1079, 1313, 1633, 1714, 1744, 2135, 2311, 2819 |
| MabI | ACCWGGT | 1 cut(s) | 3030 |
| MaeI | CTAG | 6 cut(s) | 201, 794, 1977, 2372, 2909, 3141 |
| MaeII | ACGT | 3 cut(s) | 2613, 2829, 2854 |
| MaeIII | GTNAC | 8 cut(s) | 740, 749, 1786, 2107, 2301, 2525, 2919, 2980 |
| MfeI | CAATTG | 1 cut(s) | 1761 |
| MflI | RGATCY | 1 cut(s) | 992 |
| MhlI | GDGCHC | 4 cut(s) | 1962, 2486, 2903, 2955 |
| MlsI | TGGCCA | 1 cut(s) | 1994 |
| MluNI | TGGCCA | 1 cut(s) | 1994 |
| MlyI | GAGTC | 4 cut(s) | 320, 1395, 2105, 2927 |
| MmeI | TCCRAC | 2 cut(s) | 303, 489 |
| Mox20I | TGGCCA | 1 cut(s) | 1994 |
| MroXI | GAANNNNTTC | 3 cut(s) | 622, 1952, 2177 |
| MscI | TGGCCA | 1 cut(s) | 1994 |
| MseI | TTAA | 9 cut(s) | 44, 420, 557, 614, 1584, 1614, 2625, 2765, 3045 |
| MslI | CAYNNNNRTG | 1 cut(s) | 290 |
| Msp20I | TGGCCA | 1 cut(s) | 1994 |
| MspA1I | CMGCKG | 1 cut(s) | 1847 |
| MspI | CCGG | 8 cut(s) | 119, 416, 830, 1257, 2469, 2595, 2722, 2814 |
| MunI | CAATTG | 1 cut(s) | 1761 |
| MvaI | CCWGG | 7 cut(s) | 247, 1366, 1695, 1991, 2052, 2169, 3032 |
| MvnI | CGCG | 5 cut(s) | 210, 381, 1194, 2578, 2914 |
| NciI | CCSGG | 4 cut(s) | 830, 1258, 2596, 2723 |
| NdeI | CATATG | 1 cut(s) | 274 |
| NheI | GCTAGC | 1 cut(s) | 2908 |
| NlaIV | GGNNCC | 4 cut(s) | 994, 1255, 1734, 3018 |
| NmeAIII | GCCGAG | 2 cut(s) | 1374, 1473 |
| NmuCI | GTSAC | 4 cut(s) | 740, 1786, 2107, 2919 |
| NruI | TCGCGA | 2 cut(s) | 381, 1194 |
| NspI | RCATGY | 1 cut(s) | 3044 |
| NspV | TTCGAA | 2 cut(s) | 185, 3059 |
| PasI | CCCWGGG | 1 cut(s) | 2168 |
| PceI | AGGCCT | 1 cut(s) | 1878 |
| PciSI | GCTCTTC | 1 cut(s) | 3056 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2155 |
| PdmI | GAANNNNTTC | 3 cut(s) | 622, 1952, 2177 |
| PfeI | GAWTC | 2 cut(s) | 326, 1124 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2947 |
| PfoI | TCCNGGA | 4 cut(s) | 828, 1256, 1693, 2721 |
| PinAI | ACCGGT | 1 cut(s) | 415 |
| PleI | GAGTC | 4 cut(s) | 319, 1394, 2104, 2926 |
| PpsI | GAGTC | 4 cut(s) | 319, 1394, 2104, 2926 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2405 |
| PshBI | ATTAAT | 1 cut(s) | 2765 |
| PsiI | TTATAA | 1 cut(s) | 2076 |
| Psp124BI | GAGCTC | 1 cut(s) | 2903 |
| Psp6I | CCWGG | 7 cut(s) | 245, 1364, 1693, 1989, 2050, 2167, 3030 |
| PspFI | CCCAGC | 1 cut(s) | 2205 |
| PspGI | CCWGG | 7 cut(s) | 245, 1364, 1693, 1989, 2050, 2167, 3030 |
| PspN4I | GGNNCC | 4 cut(s) | 994, 1255, 1734, 3018 |
| PspPI | GGNCC | 3 cut(s) | 1254, 3086, 3096 |
| PstI | CTGCAG | 2 cut(s) | 267, 1158 |
| PsuI | RGATCY | 1 cut(s) | 992 |
| RruI | TCGCGA | 2 cut(s) | 381, 1194 |
| RsaI | GTAC | 4 cut(s) | 821, 1031, 2477, 2633 |
| RsaNI | GTAC | 4 cut(s) | 820, 1030, 2476, 2632 |
| RseI | CAYNNNNRTG | 1 cut(s) | 290 |
| SacI | GAGCTC | 1 cut(s) | 2903 |
| SapI | GCTCTTC | 1 cut(s) | 3056 |
| SaqAI | TTAA | 9 cut(s) | 44, 420, 557, 614, 1584, 1614, 2625, 2765, 3045 |
| Sau96I | GGNCC | 3 cut(s) | 1254, 3086, 3096 |
| SchI | GAGTC | 4 cut(s) | 320, 1395, 2105, 2927 |
| SduI | GDGCHC | 4 cut(s) | 1962, 2486, 2903, 2955 |
| SexAI | ACCWGGT | 1 cut(s) | 3030 |
| SfaNI | GCATC | 9 cut(s) | 523, 1079, 1313, 1633, 1714, 1744, 2135, 2311, 2819 |
| SfcI | CTRYAG | 3 cut(s) | 263, 1154, 1516 |
| SfuI | TTCGAA | 2 cut(s) | 185, 3059 |
| SinI | GGWCC | 2 cut(s) | 1254, 3096 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 290 |
| SmlI | CTYRAG | 3 cut(s) | 745, 1374, 1627 |
| SmoI | CTYRAG | 3 cut(s) | 745, 1374, 1627 |
| SseBI | AGGCCT | 1 cut(s) | 1878 |
| SspI | AATATT | 1 cut(s) | 765 |
| SspMI | CTAG | 6 cut(s) | 201, 794, 1977, 2372, 2909, 3141 |
| SstI | GAGCTC | 1 cut(s) | 2903 |
| StuI | AGGCCT | 1 cut(s) | 1878 |
| StyI | CCWWGG | 2 cut(s) | 1879, 3140 |
| TaaI | ACNGT | 4 cut(s) | 342, 740, 1450, 2201 |
| TaiI | ACGT | 3 cut(s) | 2616, 2832, 2857 |
| TaqII | GACCGA | 3 cut(s) | 740, 1104, 3113 |
| TatI | WGTACW | 3 cut(s) | 819, 2475, 2631 |
| TauI | GCSGC | 4 cut(s) | 213, 858, 1705, 1850 |
| TfiI | GAWTC | 2 cut(s) | 326, 1124 |
| Tru1I | TTAA | 9 cut(s) | 44, 420, 557, 614, 1584, 1614, 2625, 2765, 3045 |
| Tru9I | TTAA | 9 cut(s) | 44, 420, 557, 614, 1584, 1614, 2625, 2765, 3045 |
| TscAI | CASTG | 2 cut(s) | 795, 1828 |
| TseFI | GTSAC | 4 cut(s) | 740, 1786, 2107, 2919 |
| Tsp45I | GTSAC | 4 cut(s) | 740, 1786, 2107, 2919 |
| TspGWI | ACGGA | 2 cut(s) | 2260, 2999 |
| TspRI | CASTG | 2 cut(s) | 795, 1828 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2947 |
| VpaK11BI | GGWCC | 2 cut(s) | 1254, 3096 |
| VspI | ATTAAT | 1 cut(s) | 2765 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 2334, 3074 |
| XapI | RAATTY | 5 cut(s) | 985, 1034, 1082, 1487, 2387 |
| XceI | RCATGY | 1 cut(s) | 3044 |
| XmaJI | CCTAGG | 1 cut(s) | 3140 |
| XmnI | GAANNNNTTC | 3 cut(s) | 622, 1952, 2177 |
| XspI | CTAG | 6 cut(s) | 201, 794, 1977, 2372, 2909, 3141 |