Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0000463

Physical Location & Seq

Genomic Coordinates Forward (+)

13543925 .. 13547025

Gene Structure 3101 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G104500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2850 bp

ATGGCGAAACAGTTCAGGAAGAAGGTGTTGAGTCGAGAAGATGATGAAGATGAGACTGCACAAAACAGAAAAGAGAAAGAGAGAGGGGTTAAACGACAACCACCTTCCCCACATGAAGCAAATGATGATGATGATGATGGTTCAGAGTCTGAACAAGAGAGATTGCGTGATCAAAGAGAGAGGGAGCAATTGGACCGTAATATAAGGGAGCGGGACGCAGCAGCAACGCGAAAGCTATCAGAGCAAAAGCAGGCTTTTCCCACTCGGAGAAGCAATATTGTTGGCGACGTTGAAACTTTAAGAAAAGTTTCAAGACAAGAATATTTAAAGAAAAGGGAGGCAAATAAATTAAAGGAACTTGGAGAATCTATAGAAGATGGGGAGTACTTGTATAGAGGCGTTAAGCTTACTGAAGTGGAATACAATCGATTAAGTTACGAGAAGAAAATATATGAGCTTGCGACGAAGCATGAGGCTGCTACTCATCATGATCAGTACTACAGGATTCCGGAACCCTATGACGATCATGAGGGCGGTGTTAATCAGGAGAAGCGATTCTCGGTGGCTTTACAACGTTGCTGGGATGATGACCTGAATGGCAGGGATAAAAAATCGAACCAGTTTGCAGAACAGAAAGCCTGGGAGGATCAGCAAATTGGGAAGGCAACATTGAAGTTTGGTTCGAAAAACAAAAGGCGAAAATGTGATGAGGAATATGATTTTGTATTTGAAGACCAGATTGAATTTGTCAAGGCGTCAGTACTACTGGAGGGTGATCAGATGATTGCTAACGGTAATGTTGATGTCGGGAAAGTGCAACCATCCCATCAGTTGGATAAGCTGCGGGAGGAGAGGAAAACATTACCTATCTACGCATTTCGTGAGAGATTGCTCCAAGATGTTGAAAAAAATCAGGTTCTTATTATTGTGGGCGAAACTGGATCTGGAAAAACTACACAGATACCTCAATATCTACACGAGGCCGGGTACACAAAGGGAGGAAAGAAGATCGGGTGCACACAACCACGGCGAATTGCTGCTATGAGCGTTGCTGCCAGGGTTTCTCAAGAGATGGGTGTCAAGCTTGGGCATGCAGTCGGTTATTCCATCCGTTTCGAGGATTGCACCTCGGAGAAGACTGTTTTGAAATATATGACAGATGGAATGCTGCTGCGAGAATTCCTTGTTGAGCCAGATTTGGCAAGCTACAGTGTGGTGATGGTGGACGAGGCTCACGAGAGAACACTGTCAACGGATGTTTTGTTAGGATTGCTCAAGGACATTGCACGATACAGACCTGATCTTAAACTGATCATTTCAAGTGCTACTCTCGATGCTGAGAAGTTCAGTGACTTCTTTGATTCCGCCAAGATTCTAAGAATCCCTGGGAGACGGTATCCGGTTGATATACACTACATGGAAGCACCGCAGGCTGATTACCTAGATGCAGCAATTGTGGCTGCACTTCAAATACACGTGACACAACCGCCTGGGGACATATTGGTTTTTCTCACTGGTCAGGAAGAAATCGAAACAGCGGAGGAGATATTTAAACACAGGACAAGGGGGTTAGGGACGAAAATTAGTGAGCTTATAATCTGTCCCATATATGCAAACCTGCCCACGGAGCTGCAGGCTAAAATCTTTGAGCCCACACCGGAAGGGGCTAGAAAAGTTGTCCTCGCTACAAATATTGCAGAGACCTCTCTGACTATTGATGGGATCAAATATGTCATTGACCCCGGCTTCAGCAAGATGAAATCTTATAATCCGAGGAGTGGGATGGAGTCACTGCAAGTCACCCCGATCTCAAAGGCATCCTCCATGCAAAGGGCAGGTCGGGCTGGTCGAACAGGCCACGGGAAGTGCTTCCGGTTATACACTAGTTACAACTATGACAGTGATTTAGATGATACCACAGTTCCGGAAGTGCAGCGGACTAACCTCGCCAATGTTGTTCTCACGCTCAAGAGCCTCGGCATTCATGACTTGGTGAATTTCGAGTTCATGGACCCTCCACCTTGTGAAGCATTACTAAAAGCCCTGGAATTGTTGTTTGCACTCGGTGCATTAAACAAAGTGGGGGAGCTAACTAAAGTTGGTAGACGGATGGCGGAGTTCCCTGTTGATCCAATGCTATCTAAAATGATCGTGGCCTCAGACAAGTACAAGTGCTCAGATGAGGTAATCTCCATTGCTGCCATGCTTTCCACCGGTAGTTCAATCTTCTATCGTCCAAAAGACAAACAAGTACATGCTGACACTGCAAGGTTGAGGTTTCACAGTGGGAATGTGGGAGATCACATTGCATTGCTTAAGGTTTACAATGAATGGAAAGAGGCAAATTACTCGACGCAATGGTGTTACGAAAACTATATACAAGTTAGGAGCATGAAAAGAGCAAGAGACATCCGTGATCAACTCGAGCGCCTCTTGGAGAGAGTTGAGATCAAGCTCAGTAGCTCAAATGATTTAGAGGCTATAAAGAAGGCCGTTACATCAGGATTCTTCCCTCATTGTGCTAGGCTGCAGAAGAATGGGTCATATAGAACAATCAAACACCCTCACACTGCCCATATACACCCCAGCTCAGGGATTATGGCATTGGAACATCATGTGCTTCCAAGATGTGTTTTGTACCATGAACTGGTACTGACTACCAAGGAATATATGAGACAGGTCACAGAGATAAAGCCGGAATGGTTGGTTGAAATAGCTCCACATTATTACCAGTTGAACGGCGTCGTTGATGAGGATTACTCAACTTCAAAGAAGATGCCTCGTGGAAAAGGGCGTGCAAGCACTTCAAAGCAAATTCCTAATCTTGTTGATTACAGCATATGTGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000375 GO:0000377 GO:0000398 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009790 GO:0009791 GO:0009793 GO:0009892 GO:0009987 GO:0010154 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0016020 GO:0016070 GO:0016071 GO:0016441 GO:0016458 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0022414 GO:0031047 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0035194 GO:0040029 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048316 GO:0048519 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DEAD HA2 Helicase_C OB_NTP_bind

Protein Analysis

950

Amino Acids

108.25

Weight (kDa)

6.84

Isoelectric Point (pI)

37.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000463)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32490 AT1G32490 AT2G35340 AT2G35340 AT4G16680 AT4G16680
fragaria_vesca	FvH4_1g06760 FvH4_1g06761 FvH4_1g06770 FvH4_3g40380 FvH4_3g40450 FvH4_5g14240 FvH4_5g14240 FvH4_5g14240 FvH4_5g14240 FvH4_7g01330 FvH4_7g01330
malus_domestica	MD02G1072400.v1.1 MD02G1072500.v1.1 MD02G1088100.v1.1 MD06G1200100.v1.1 MD07G1285300.v1.1 MD08G1042900.v1.1
prunus_persica	Prupe.5G201700_v2.0.a1 Prupe.5G201700_v2.0.a1 Prupe.6G014300_v2.0.a1 Prupe.6G159800_v2.0.a1 Prupe.7G201500_v2.0.a1 Prupe.8G103900_v2.0.a1 Prupe.8G104500_v2.0.a1
pyrus_communis	pycom02g05640 pycom02g05650 pycom14g17310
rosa_chinensis	RchiOBHm_Chr2g0092491 RchiOBHm_Chr2g0092541 RchiOBHm_Chr5g0073091 RchiOBHm_Chr6g0263651 RchiOBHm_Chr6g0263711 RchiOBHm_Chr7g0182681
rosa_laevigata	RLG00000005109 RLG00000014320 RLG00000014322 RLG00000014324 RLG00000014326 RLG00000014327 RLG00000016318 RLG00000016322 RLG00000036362
rosa_multiflora	Rmu_sc0000014.1_g000045 Rmu_sc0002174.1_g000001 Rmu_sc0003570.1_g000001 Rmu_sc0004296.1_g000005 Rmu_sc0004296.1_g000014 Rmu_sc0005592.1_g000025
rosa_roxburghii	Rroxscaffold_176G00431160 Rroxscaffold_176G00431170 Rroxscaffold_2G00148990 Rroxscaffold_2G00149040 Rroxscaffold_3G00271070 Rroxscaffold_6G00409880 Rroxscaffold_7G00204020 Rroxscaffold_7G00204040 Rroxscaffold_7G00204070
rosa_rugosa	Rorug02G0027100 Rorug02G0027200 Rorug02G0027300 Rorug05G0421000 Rorug06G0449100
rosa_samantha	Rh2AG072900 Rh2AG073200 Rh2BG073500 Rh2BG074100 Rh2CG074700 Rh2DG071600 Rh2DG072300 Rh5AG478000 Rh5BG498700 Rh5DG510800 Rh6AG125300 Rh6BG121400 Rh6CG119800 Rh7AG052900 Rh7BG052500 Rh7CG054000 Rh7DG052300
rosa_wichuraiana	Rw0G005280 Rw2G005970 Rw2G006000 Rw5G044390 Rw6G010890 Rw7G004310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1595, 1767
Acc36I	ACCTGC	2 cut(s)	1626, 1826
AccB7I	CCANNNNNTGG	2 cut(s)	832, 2647
AccBSI	CCGCTC	1 cut(s)	211
AccI	GTMKAC	1 cut(s)	2104
AccII	CGCG	1 cut(s)	229
AccIII	TCCGGA	2 cut(s)	508, 1924
AciI	CCGC	9 cut(s)	211, 534, 844, 1365, 1427, 1487, 1538, 1936, 2114
AclI	AACGTT	1 cut(s)	574
AclWI	GGATC	4 cut(s)	654, 949, 1730, 2123
AcsI	RAATTY	4 cut(s)	743, 1178, 1996, 2814
AcuI	CTGAAG	2 cut(s)	432, 1732
AcvI	CACGTG	1 cut(s)	1477
AcyI	GRCGYC	2 cut(s)	755, 2742
AdeI	CACNNNGTG	2 cut(s)	2024, 2066
AfaI	GTAC	8 cut(s)	386, 497, 762, 989, 2168, 2253, 2639, 2652
AfiI	CCNNNNNNNGG	8 cut(s)	832, 1117, 1624, 1778, 1830, 2591, 2592, 2647
AflII	CTTAAG	1 cut(s)	2315
AflIII	ACRYGT	1 cut(s)	1474
AgeI	ACCGGT	1 cut(s)	2213
AhlI	ACTAGT	1 cut(s)	1883
AjnI	CCWGG	5 cut(s)	638, 1055, 1384, 1489, 2043
Alw21I	GWGCWC	2 cut(s)	1019, 2177
Alw26I	GTCTC	5 cut(s)	47, 1384, 1694, 2400, 2668
Alw44I	GTGCAC	1 cut(s)	1015
AlwI	GGATC	4 cut(s)	654, 949, 1730, 2123
AlwNI	CAGNNNCTG	1 cut(s)	149
Ama87I	CYCGRG	1 cut(s)	2423
Aor13HI	TCCGGA	2 cut(s)	508, 1924
AoxI	GGCC	4 cut(s)	981, 1855, 2154, 2490
ApaLI	GTGCAC	1 cut(s)	1015
ApoI	RAATTY	4 cut(s)	743, 1178, 1996, 2814
ArsI	GACNNNNNNTTYG	2 cut(s)	1822, 1854
AsiGI	ACCGGT	1 cut(s)	2213
Asp700I	GAANNNNTTC	4 cut(s)	11, 307, 554, 1868
AspLEI	GCGC	1 cut(s)	2430
AspS9I	GGNCC	2 cut(s)	193, 2011
AsuC2I	CCSGG	2 cut(s)	985, 1743
AsuHPI	GGTGA	4 cut(s)	785, 1228, 1792, 2005
AsuII	TTCGAA	1 cut(s)	683
AvaI	CYCGRG	1 cut(s)	2423
AvaII	GGWCC	2 cut(s)	193, 2011
BaeGI	GKGCMC	1 cut(s)	1019
BaeI	ACNNNNGTAYC	2 cut(s)	1905, 1938
BanII	GRGCYC	1 cut(s)	1653
BauI	CACGAG	3 cut(s)	977, 1235, 2781
BbrPI	CACGTG	1 cut(s)	1477
BbsI	GAAGAC	2 cut(s)	738, 1142
Bbv12I	GWGCWC	2 cut(s)	1019, 2177
BceAI	ACGGC	3 cut(s)	1043, 2477, 2755
BcgI	CGANNNNNNTGC	2 cut(s)	2331, 2365
BciT130I	CCWGG	5 cut(s)	640, 1057, 1386, 1491, 2045
BciVI	GTATCC	1 cut(s)	1407
BclI	TGATCA	5 cut(s)	169, 490, 775, 1311, 2416
BcnI	CCSGG	2 cut(s)	985, 1743
BcoDI	GTCTC	5 cut(s)	47, 1384, 1694, 2400, 2668
BcuI	ACTAGT	1 cut(s)	1883
BfaI	CTAG	4 cut(s)	1442, 1668, 1884, 2523
BfmI	CTRYAG	5 cut(s)	369, 499, 1207, 1631, 2528
BfoI	RGCGCY	1 cut(s)	2431
BfrI	CTTAAG	1 cut(s)	2315
BfuAI	ACCTGC	2 cut(s)	1626, 1826
BfuI	GTATCC	1 cut(s)	1407
BmcAI	AGTACT	3 cut(s)	386, 497, 762
Bme1390I	CCNGG	7 cut(s)	640, 985, 1057, 1386, 1491, 1743, 2045
Bme18I	GGWCC	2 cut(s)	193, 2011
BmeT110I	CYCGRG	1 cut(s)	2423
BmgT120I	GGNCC	2 cut(s)	193, 2011
BmiI	GGNNCC	2 cut(s)	513, 2013
BmrFI	CCNGG	7 cut(s)	640, 985, 1057, 1386, 1491, 1743, 2045
BmsI	GCATC	4 cut(s)	1324, 1435, 1826, 2766
BpiI	GAAGAC	2 cut(s)	738, 1142
BplI	GAGNNNNNCTC	4 cut(s)	2174, 2206, 2744, 2776
BpmI	CTGGAG	1 cut(s)	788
Bpu10I	CCTNAGC	1 cut(s)	2590
Bpu14I	TTCGAA	1 cut(s)	683
BpuEI	CTTGAG	3 cut(s)	1050, 1259, 1952
BpuMI	CCSGG	2 cut(s)	985, 1743
Bsa29I	ATCGAT	1 cut(s)	427
BsaAI	YACGTR	1 cut(s)	1477
BsaHI	GRCGYC	2 cut(s)	755, 2742
BsaI	GGTCTC	1 cut(s)	1694
BsaWI	WCCGGW	6 cut(s)	508, 1399, 1657, 1872, 1924, 2213
BsaXI	ACNNNNNCTCC	2 cut(s)	374, 404
Bsc4I	CCNNNNNNNGG	8 cut(s)	832, 1117, 1624, 1778, 1830, 2591, 2592, 2647
Bse118I	RCCGGY	1 cut(s)	2213
Bse1I	ACTGG	6 cut(s)	619, 771, 943, 1519, 2652, 2731
Bse3DI	GCAATG	5 cut(s)	1281, 2193, 2304, 2309, 2363
BseAI	TCCGGA	2 cut(s)	508, 1924
BseBI	CCWGG	5 cut(s)	640, 1057, 1386, 1491, 2045
BseCI	ATCGAT	1 cut(s)	427
BseGI	GGATG	8 cut(s)	589, 821, 1107, 1261, 1788, 1817, 2115, 2409
BseLI	CCNNNNNNNGG	8 cut(s)	832, 1117, 1624, 1778, 1830, 2591, 2592, 2647
BseMI	GCAATG	5 cut(s)	1281, 2193, 2304, 2309, 2363
BseMII	CTCAG	5 cut(s)	1329, 2172, 2190, 2470, 2604
BseNI	ACTGG	6 cut(s)	619, 771, 943, 1519, 2652, 2731
BseRI	GAGGAG	3 cut(s)	863, 1556, 1789
BseSI	GKGCMC	1 cut(s)	1019
BseYI	CCCAGC	2 cut(s)	579, 2585
BsgI	GTGCAG	3 cut(s)	42, 1446, 1952
Bsh1236I	CGCG	1 cut(s)	229
BshFI	GGCC	4 cut(s)	983, 1857, 2156, 2492
BshTI	ACCGGT	1 cut(s)	2213
BshVI	ATCGAT	1 cut(s)	427
BsiHKAI	GWGCWC	2 cut(s)	1019, 2177
BsiHKCI	CYCGRG	1 cut(s)	2423
BsiSI	CCGG	9 cut(s)	509, 984, 1400, 1658, 1743, 1873, 1925, 2214, 2696
BslFI	GGGAC	4 cut(s)	227, 1508, 1587, 1588
BslI	CCNNNNNNNGG	8 cut(s)	832, 1117, 1624, 1778, 1830, 2591, 2592, 2647
BsmAI	GTCTC	5 cut(s)	47, 1384, 1694, 2400, 2668
BsmBI	CGTCTC	1 cut(s)	1384
BsmFI	GGGAC	4 cut(s)	227, 1508, 1587, 1588
BsmI	GAATGC	2 cut(s)	1170, 1980
BsnI	GGCC	4 cut(s)	983, 1857, 2156, 2492
Bso31I	GGTCTC	1 cut(s)	1694
BsoBI	CYCGRG	1 cut(s)	2423
Bsp119I	TTCGAA	1 cut(s)	683
Bsp1286I	GDGCHC	3 cut(s)	1019, 1653, 2177
Bsp13I	TCCGGA	2 cut(s)	508, 1924
BspACI	CCGC	9 cut(s)	211, 534, 844, 1365, 1427, 1487, 1538, 1936, 2114
BspANI	GGCC	4 cut(s)	983, 1857, 2156, 2492
BspCNI	CTCAG	5 cut(s)	1330, 2171, 2189, 2469, 2603
BspDI	ATCGAT	1 cut(s)	427
BspEI	TCCGGA	2 cut(s)	508, 1924
BspFNI	CGCG	1 cut(s)	229
BspHI	TCATGA	3 cut(s)	487, 526, 1984
BspLI	GGNNCC	2 cut(s)	513, 2013
BspMAI	CTGCAG	2 cut(s)	1635, 2532
BspMI	ACCTGC	2 cut(s)	1626, 1826
BspPI	GGATC	4 cut(s)	654, 949, 1730, 2123
BspT104I	TTCGAA	1 cut(s)	683
BspTI	CTTAAG	1 cut(s)	2315
BspTNI	GGTCTC	1 cut(s)	1694
BsrBI	CCGCTC	1 cut(s)	211
BsrDI	GCAATG	5 cut(s)	1281, 2193, 2304, 2309, 2363
BsrFI	RCCGGY	1 cut(s)	2213
BsrI	ACTGG	6 cut(s)	619, 771, 943, 1519, 2652, 2731
BssAI	RCCGGY	1 cut(s)	2213
BssNI	GRCGYC	2 cut(s)	755, 2742
BssSI	CACGAG	3 cut(s)	977, 1235, 2781
BssT1I	CCWWGG	1 cut(s)	2661
Bst2BI	CACGAG	3 cut(s)	977, 1235, 2781
Bst2UI	CCWGG	5 cut(s)	640, 1057, 1386, 1491, 2045
BstACI	GRCGYC	2 cut(s)	755, 2742
BstAFI	CTTAAG	1 cut(s)	2315
BstAPI	GCANNNNNTGC	1 cut(s)	2066
BstBAI	YACGTR	1 cut(s)	1477
BstBI	TTCGAA	1 cut(s)	683
BstC8I	GCNNGC	8 cut(s)	252, 459, 1092, 1204, 1431, 1635, 2796, 2800
BstDEI	CTNAG	6 cut(s)	1338, 1376, 2158, 2176, 2456, 2590
BstDSI	CCRYGG	3 cut(s)	1025, 1623, 1858
BstF5I	GGATG	8 cut(s)	589, 821, 1107, 1261, 1788, 1817, 2115, 2409
BstFNI	CGCG	1 cut(s)	229
BstH2I	RGCGCY	1 cut(s)	2431
BstHHI	GCGC	1 cut(s)	2430
BstMAI	GTCTC	5 cut(s)	47, 1384, 1694, 2400, 2668
BstMWI	GCNNNNNNNGC	7 cut(s)	241, 1430, 1457, 1627, 1841, 2066, 2264
BstNI	CCWGG	5 cut(s)	640, 1057, 1386, 1491, 2045
BstNSI	RCATGY	2 cut(s)	1094, 2258
BstSCI	CCNGG	7 cut(s)	638, 983, 1055, 1384, 1489, 1741, 2043
BstSFI	CTRYAG	5 cut(s)	369, 499, 1207, 1631, 2528
BstSLI	GKGCMC	1 cut(s)	1019
BstUI	CGCG	1 cut(s)	229
BstV2I	GAAGAC	2 cut(s)	738, 1142
BstX2I	RGATCY	1 cut(s)	941
BstYI	RGATCY	1 cut(s)	941
Bsu15I	ATCGAT	1 cut(s)	427
BsuI	GTATCC	1 cut(s)	1407
BsuRI	GGCC	4 cut(s)	983, 1857, 2156, 2492
BsuTUI	ATCGAT	1 cut(s)	427
BtgI	CCRYGG	3 cut(s)	1025, 1623, 1858
BtsCI	GGATG	8 cut(s)	589, 821, 1107, 1261, 1788, 1817, 2115, 2409
BtsI	GCAGTG	3 cut(s)	1790, 2262, 2568
BtsIMutI	CAGTG	9 cut(s)	1216, 1244, 1354, 1512, 1790, 1906, 2262, 2290, 2568
BveI	ACCTGC	2 cut(s)	1626, 1826
Cac8I	GCNNGC	8 cut(s)	252, 459, 1092, 1204, 1431, 1635, 2796, 2800
CaiI	CAGNNNCTG	1 cut(s)	149
CciI	TCATGA	3 cut(s)	487, 526, 1984
CfoI	GCGC	1 cut(s)	2430
Cfr10I	RCCGGY	1 cut(s)	2213
Cfr13I	GGNCC	2 cut(s)	193, 2011
ClaI	ATCGAT	1 cut(s)	427
CseI	GACGC	4 cut(s)	224, 744, 2362, 2731
Csp6I	GTAC	8 cut(s)	385, 496, 761, 988, 2167, 2252, 2638, 2651
CspAI	ACCGGT	1 cut(s)	2213
CviQI	GTAC	8 cut(s)	385, 496, 761, 988, 2167, 2252, 2638, 2651
DdeI	CTNAG	6 cut(s)	1338, 1376, 2158, 2176, 2456, 2590
DraI	TTTAAA	2 cut(s)	327, 1552
DraIII	CACNNNGTG	2 cut(s)	2024, 2066
EciI	GGCGGA	2 cut(s)	1354, 2129
Eco130I	CCWWGG	1 cut(s)	2661
Eco24I	GRGCYC	1 cut(s)	1653
Eco31I	GGTCTC	1 cut(s)	1694
Eco47I	GGWCC	2 cut(s)	193, 2011
Eco57I	CTGAAG	2 cut(s)	432, 1732
Eco72I	CACGTG	1 cut(s)	1477
Eco88I	CYCGRG	1 cut(s)	2423
EcoRI	GAATTC	1 cut(s)	1178
EcoRII	CCWGG	5 cut(s)	638, 1055, 1384, 1489, 2043
EcoT14I	CCWWGG	1 cut(s)	2661
EcoT38I	GRGCYC	1 cut(s)	1653
ErhI	CCWWGG	1 cut(s)	2661
Esp3I	CGTCTC	1 cut(s)	1384
FaqI	GGGAC	4 cut(s)	227, 1508, 1587, 1588
FauI	CCCGC	2 cut(s)	204, 837
FauNDI	CATATG	1 cut(s)	2840
FbaI	TGATCA	5 cut(s)	169, 490, 775, 1311, 2416
FblI	GTMKAC	1 cut(s)	2104
FokI	GGATG	8 cut(s)	596, 808, 1094, 1268, 1795, 1804, 2122, 2396
FriOI	GRGCYC	1 cut(s)	1653
FspBI	CTAG	4 cut(s)	1442, 1668, 1884, 2523
GlaI	GCGC	1 cut(s)	2429
GsaI	CCCAGC	2 cut(s)	583, 2589
GsuI	CTGGAG	1 cut(s)	788
HaeII	RGCGCY	1 cut(s)	2431
HaeIII	GGCC	4 cut(s)	983, 1857, 2156, 2492
HapII	CCGG	9 cut(s)	509, 984, 1400, 1658, 1743, 1873, 1925, 2214, 2696
HgaI	GACGC	4 cut(s)	224, 744, 2362, 2731
HhaI	GCGC	1 cut(s)	2430
Hin1I	GRCGYC	2 cut(s)	755, 2742
Hin6I	GCGC	1 cut(s)	2428
HinP1I	GCGC	1 cut(s)	2428
HincII	GTYRAC	1 cut(s)	1251
HindII	GTYRAC	1 cut(s)	1251
HindIII	AAGCTT	2 cut(s)	404, 1082
HpaII	CCGG	9 cut(s)	509, 984, 1400, 1658, 1743, 1873, 1925, 2214, 2696
HphI	GGTGA	4 cut(s)	785, 1228, 1792, 2005
Hpy166II	GTNNAC	6 cut(s)	990, 1017, 1225, 1251, 2105, 2323
Hpy8I	GTNNAC	6 cut(s)	990, 1017, 1225, 1251, 2105, 2323
Hpy99I	CGWCG	4 cut(s)	290, 466, 2356, 2747
HpyAV	CCTTC	5 cut(s)	16, 114, 655, 1655, 2482
HpyCH4IV	ACGT	3 cut(s)	288, 574, 1476
HpyF10VI	GCNNNNNNNGC	7 cut(s)	241, 1430, 1457, 1627, 1841, 2066, 2264
HpyF3I	CTNAG	6 cut(s)	1338, 1376, 2158, 2176, 2456, 2590
HpySE526I	ACGT	3 cut(s)	288, 574, 1476
Hsp92I	GRCGYC	2 cut(s)	755, 2742
HspAI	GCGC	1 cut(s)	2428
Kpn2I	TCCGGA	2 cut(s)	508, 1924
Ksp22I	TGATCA	5 cut(s)	169, 490, 775, 1311, 2416
LmnI	GCTCC	7 cut(s)	184, 208, 897, 1627, 2086, 2388, 2722
LweI	GCATC	4 cut(s)	1324, 1435, 1826, 2766
MaeI	CTAG	4 cut(s)	1442, 1668, 1884, 2523
MaeII	ACGT	3 cut(s)	288, 574, 1476
MaeIII	GTNAC	9 cut(s)	434, 1349, 1477, 1788, 1798, 1886, 2363, 2494, 2680
MbiI	CCGCTC	1 cut(s)	211
MfeI	CAATTG	2 cut(s)	188, 1452
MflI	RGATCY	1 cut(s)	941
MhlI	GDGCHC	3 cut(s)	1019, 1653, 2177
MlyI	GAGTC	3 cut(s)	40, 155, 1796
MmeI	TCCRAC	1 cut(s)	813
MroI	TCCGGA	2 cut(s)	508, 1924
MroXI	GAANNNNTTC	4 cut(s)	11, 307, 554, 1868
MspA1I	CMGCKG	2 cut(s)	1538, 1936
MspCI	CTTAAG	1 cut(s)	2315
MspI	CCGG	9 cut(s)	509, 984, 1400, 1658, 1743, 1873, 1925, 2214, 2696
MspR9I	CCNGG	7 cut(s)	640, 985, 1057, 1386, 1491, 1743, 2045
MunI	CAATTG	2 cut(s)	188, 1452
Mva1269I	GAATGC	2 cut(s)	1170, 1980
MvaI	CCWGG	5 cut(s)	640, 1057, 1386, 1491, 2045
MvnI	CGCG	1 cut(s)	229
MwoI	GCNNNNNNNGC	7 cut(s)	241, 1430, 1457, 1627, 1841, 2066, 2264
NciI	CCSGG	2 cut(s)	985, 1743
NdeI	CATATG	1 cut(s)	2840
NlaIV	GGNNCC	2 cut(s)	513, 2013
NmeAIII	GCCGAG	1 cut(s)	1956
NmuCI	GTSAC	5 cut(s)	1349, 1477, 1788, 1798, 2680
NspI	RCATGY	2 cut(s)	1094, 2258
NspV	TTCGAA	1 cut(s)	683
PaeI	GCATGC	1 cut(s)	1094
PaeR7I	CTCGAG	1 cut(s)	2423
PagI	TCATGA	3 cut(s)	487, 526, 1984
PasI	CCCWGGG	1 cut(s)	1385
PcsI	WCGNNNNNNNCGW	2 cut(s)	1233, 1846
PctI	GAATGC	2 cut(s)	1170, 1980
PdmI	GAANNNNTTC	4 cut(s)	11, 307, 554, 1868
PfeI	GAWTC	7 cut(s)	365, 505, 555, 1361, 1372, 1380, 2505
PflMI	CCANNNNNTGG	2 cut(s)	832, 2647
PinAI	ACCGGT	1 cut(s)	2213
PleI	GAGTC	3 cut(s)	39, 154, 1795
PmaCI	CACGTG	1 cut(s)	1477
PmlI	CACGTG	1 cut(s)	1477
PpsI	GAGTC	3 cut(s)	39, 154, 1795
Ppu21I	YACGTR	1 cut(s)	1477
PsiI	TTATAA	2 cut(s)	1595, 1767
Psp1406I	AACGTT	1 cut(s)	574
Psp6I	CCWGG	5 cut(s)	638, 1055, 1384, 1489, 2043
PspCI	CACGTG	1 cut(s)	1477
PspFI	CCCAGC	2 cut(s)	579, 2585
PspGI	CCWGG	5 cut(s)	638, 1055, 1384, 1489, 2043
PspN4I	GGNNCC	2 cut(s)	513, 2013
PspPI	GGNCC	2 cut(s)	193, 2011
PspXI	VCTCGAGB	1 cut(s)	2423
PstI	CTGCAG	2 cut(s)	1635, 2532
PstNI	CAGNNNCTG	1 cut(s)	149
PsuI	RGATCY	1 cut(s)	941
RsaI	GTAC	8 cut(s)	386, 497, 762, 989, 2168, 2253, 2639, 2652
RsaNI	GTAC	8 cut(s)	385, 496, 761, 988, 2167, 2252, 2638, 2651
Sau96I	GGNCC	2 cut(s)	193, 2011
ScaI	AGTACT	3 cut(s)	386, 497, 762
SchI	GAGTC	3 cut(s)	40, 155, 1796
ScrFI	CCNGG	7 cut(s)	640, 985, 1057, 1386, 1491, 1743, 2045
SduI	GDGCHC	3 cut(s)	1019, 1653, 2177
SfaNI	GCATC	4 cut(s)	1324, 1435, 1826, 2766
SfcI	CTRYAG	5 cut(s)	369, 499, 1207, 1631, 2528
Sfr274I	CTCGAG	1 cut(s)	2423
SfuI	TTCGAA	1 cut(s)	683
SinI	GGWCC	2 cut(s)	193, 2011
SlaI	CTCGAG	1 cut(s)	2423
SmlI	CTYRAG	5 cut(s)	1065, 1274, 1967, 2315, 2423
SmoI	CTYRAG	5 cut(s)	1065, 1274, 1967, 2315, 2423
SpeI	ACTAGT	1 cut(s)	1883
SphI	GCATGC	1 cut(s)	1094
SsiI	CCGC	9 cut(s)	211, 534, 844, 1365, 1427, 1487, 1538, 1936, 2114
SspI	AATATT	3 cut(s)	277, 323, 1693
SspMI	CTAG	4 cut(s)	1442, 1668, 1884, 2523
StyD4I	CCNGG	7 cut(s)	638, 983, 1055, 1384, 1489, 1741, 2043
StyI	CCWWGG	1 cut(s)	2661
TaiI	ACGT	3 cut(s)	291, 577, 1479
TatI	WGTACW	5 cut(s)	384, 495, 760, 2166, 2251
TfiI	GAWTC	7 cut(s)	365, 505, 555, 1361, 1372, 1380, 2505
TscAI	CASTG	9 cut(s)	1216, 1251, 1354, 1519, 1797, 1906, 2269, 2290, 2575
TseFI	GTSAC	5 cut(s)	1349, 1477, 1788, 1798, 2680
Tsp45I	GTSAC	5 cut(s)	1349, 1477, 1788, 1798, 2680
TspDTI	ATGAA	8 cut(s)	60, 129, 1772, 1973, 1996, 2343, 2408, 2658
TspGWI	ACGGA	5 cut(s)	1100, 1268, 1640, 2122, 2402
TspRI	CASTG	9 cut(s)	1216, 1251, 1354, 1519, 1797, 1906, 2269, 2290, 2575
Van91I	CCANNNNNTGG	2 cut(s)	832, 2647
Vha464I	CTTAAG	1 cut(s)	2315
VneI	GTGCAC	1 cut(s)	1015
VpaK11BI	GGWCC	2 cut(s)	193, 2011
XapI	RAATTY	4 cut(s)	743, 1178, 1996, 2814
XceI	RCATGY	2 cut(s)	1094, 2258
XhoI	CTCGAG	1 cut(s)	2423
XmiI	GTMKAC	1 cut(s)	2104
XmnI	GAANNNNTTC	4 cut(s)	11, 307, 554, 1868
XspI	CTAG	4 cut(s)	1442, 1668, 1884, 2523
ZrmI	AGTACT	3 cut(s)	386, 497, 762

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.