Rh2BG073500

Pre-mRNA-splicing factor ATP-dependent RNA helicase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
5561383 .. 5564131
2749 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG073500.1

Sequence Viewer

Length: 2301 bp
ATGGGGTGTGAGAGCAACCTGAAGACATGGGTGTCTGATAAGTTAATAGCATTGCTCGGATACTCTAATCCGGTAGTTGTTCAGTATGTTATTGGATTAACTAAAAAAGCAAACTCCCTGGCTGGTTTGGTGGACAAGCTTGTCGAATTTGGATTTGCGTCATCGACTGAAACAGGGGCATTTGCTGCAGATATCTTTGCAAGAGTGTGTGGTGAAACATCTGGTTTGAAGCAATGTGGGAAACAAGAGAGTGGAGGTGCAATGCCGGTGAGGATGATGCAGCGGACCTATGTTCTGTTGGATTCAGATGATGATGGTGATGCGGAGAGATGTTCTGTTGAGGTTGTTTCTCATTCTGTGTCTGTAACAGTGGATTTCAATAAGAAAAGATTCAGGAAGAGGGCATTGGGTCAGAGAGATGGAGATGATGATGATGAGGTTATTGCAGAACGTGTTAAAAGGCAGAACTTGCCAGATAAAGATGATCATGAGGATGGTTCAGAGTCAGAAGAAGAGAGATTGCGTGATCAAAGAGAAAGGGAGAAATTGGAGCAAAGTATAAGGAAGAGGGACGCAGCAGCCACACGAAAACTGACAAAGAAAAACTTAAGACAAAAAGGGGAAGAGGAGGCTGTTCGAAAAACCAATGGTGATGTTGAAGGTTTAAGAAGAGCTTCAAGAGAAGAATATCTAAAGGAAAGAGAGAGAAAGAAAATGGATCAAATGAGGGATGATGTAGAAGATGAACGTTACTTATTTGAAGGTGTGAAGCTCACTGAAGCAGAAAACCGGGAATTAAGTTACAAGAAGCAAATATTGGAGCTTATGAGAAAACCATTAGGTCTAGATGAGGCTGAAAATGTCACTGAGTACAGGATGCCAGATGCCTATGATGATGAGGAGCGCGGTGTTACTCAACAGAAGAGATTTTCTGTGGCTTTGCAGCACTACAAGGACAACAGTTCTGGGGATAAAATGAACTCGTTTGGACAACAGAAATCTTGGGAAGATCAGCAACTTGGAAAAGCAACATTGGAATTTGGTTCAAAAAACAAAAAAAGGGTATCTGATGAGTATGATTTTGTATATGAAGACCAGATTGAGTTCGTCAGGGGGTTGGTGATCGAGGATGATAAATATGACAAGTTTGAGGATGATAAGCAACTGCAGTCCACAAAATTACTTGAGTCAAGGGAAAAAACCTTGAAGATGTTCCAGGAGGAGAGGAAAACTTTACCCATCTTCTCATTTCATGATGAGTTGCTCCAAGCTGTTAAAGATCATCAGGTTCTTGTTATTGTTGGCGAAACTGGATCTGGCAAAACTACACAGATTCCCCAGTATTTACATGAGGCAGGATATACAAAGCATGGAAAGATTGGGTGCACACAGCCACGGCGAGTTGCTGCTATGAGTGTTGCTGCCAGGGTTTCTCAAGAAATGGGTGTCAAGCTTGGACATGAGATTTGGCAAGCTATAGATATTGCTCGATTTCGACCCGGTTTTAAGCTGCTTATCTCGAGTGCAACACTTGATGCTGTGAAGTTCAGTAATTATTTTGATTGTGCCCCAATTTTCAACATTCCAGGGAGGCGGTTTCCTGTCGATATATACCACACAAAAGCACCAGAAGCTGATTACTTAGATGCTGCAATTGCTGCTGCAATTCAAATCCATGTCAGGGAACCACCTGGAGACATATTGGTCTTCCTCACGGGTCAAGAAGATATAGAAACAGCAAGCGAAACATTAAATTACAGGACAAGTGGTCTCGGGAGAAAGATATCAGAGCTGATTATCTGTCCCATATATGCAAACCTGCCTACTGAGCAGCAAGCAAAAATTTTTGAGCCCACACCTGAAGGGGCTAGAAAGGACTGGGATGGAGTCATTGCAAGTCACTCCCATCTCAAAGGCATCAGCAAGGCAGAGGGCAGGTCGATCTGGTCGAACAGGCCCTGGCTTAAGAGCCTTGGTATCCATGACTTGATACATTTTGATTTTATGGATCCTCCACCATCGGAAGCATTACTAAAAGCCCTCGAACTGTTATTTGCTTTATCTGCATTGAATAAAATGGGAGAGTTGACTAAAGTTGGTAGGCGGATGGCAGAGTTTCCACTTGATCCAATGCTATCTAAGATGGTAGTTGCTTCTGACAGGACAAACAAGTCTATGCTGACAATGCAAGACGGACTTTTCACACTGGGGACACAGGAGATCATATTGCCTTGCTTAATGTTTACAATACATGGACCGAAACAAACTACTCAAGTCAATGGTGTTACGAAAACTATATAA

Protein Analysis

766

Amino Acids

86.77

Weight (kDa)

5.79

Isoelectric Point (pI)

40.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_HA2 PF04408 680 - 708 5e-10 Helicase associated domain (HA2), winged-helix
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000463)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32490 AT1G32490 AT2G35340 AT2G35340 AT4G16680 AT4G16680
fragaria_vesca FvH4_1g06760 FvH4_1g06761 FvH4_1g06770 FvH4_3g40380 FvH4_3g40450 FvH4_5g14240 FvH4_5g14240 FvH4_5g14240 FvH4_5g14240 FvH4_7g01330 FvH4_7g01330
malus_domestica MD02G1072400.v1.1 MD02G1072500.v1.1 MD02G1088100.v1.1 MD06G1200100.v1.1 MD07G1285300.v1.1 MD08G1042900.v1.1
prunus_persica Prupe.5G201700_v2.0.a1 Prupe.5G201700_v2.0.a1 Prupe.6G014300_v2.0.a1 Prupe.6G159800_v2.0.a1 Prupe.7G201500_v2.0.a1 Prupe.8G103900_v2.0.a1 Prupe.8G104500_v2.0.a1
pyrus_communis pycom02g05640 pycom02g05650 pycom14g17310
rosa_chinensis RchiOBHm_Chr2g0092491 RchiOBHm_Chr2g0092541 RchiOBHm_Chr5g0073091 RchiOBHm_Chr6g0263651 RchiOBHm_Chr6g0263711 RchiOBHm_Chr7g0182681
rosa_laevigata RLG00000005109 RLG00000014320 RLG00000014322 RLG00000014324 RLG00000014326 RLG00000014327 RLG00000016318 RLG00000016322 RLG00000036362
rosa_multiflora Rmu_sc0000014.1_g000045 Rmu_sc0002174.1_g000001 Rmu_sc0003570.1_g000001 Rmu_sc0004296.1_g000005 Rmu_sc0004296.1_g000014 Rmu_sc0005592.1_g000025
rosa_roxburghii Rroxscaffold_176G00431160 Rroxscaffold_176G00431170 Rroxscaffold_2G00148990 Rroxscaffold_2G00149040 Rroxscaffold_3G00271070 Rroxscaffold_6G00409880 Rroxscaffold_7G00204020 Rroxscaffold_7G00204040 Rroxscaffold_7G00204070
rosa_rugosa Rorug02G0027100 Rorug02G0027200 Rorug02G0027300 Rorug05G0421000 Rorug06G0449100
rosa_samantha Rh2AG072900 Rh2AG073200 Rh2BG073500 Rh2BG074100 Rh2CG074700 Rh2DG071600 Rh2DG072300 Rh5AG478000 Rh5BG498700 Rh5DG510800 Rh6AG125300 Rh6BG121400 Rh6CG119800 Rh7AG052900 Rh7BG052500 Rh7CG054000 Rh7DG052300
rosa_wichuraiana Rw0G005280 Rw2G005970 Rw2G006000 Rw5G044390 Rw6G010890 Rw7G004310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 4 cut(s) 31, 140, 1703, 2170
Acc36I ACCTGC 2 cut(s) 1827, 1926
AccII CGCG 1 cut(s) 906
AciI CCGC 5 cut(s) 283, 323, 906, 1594, 2104
AclI AACGTT 1 cut(s) 748
AclWI GGATC 5 cut(s) 726, 1321, 2003, 2016, 2120
AcsI RAATTY 3 cut(s) 146, 1037, 1842
AcuI CTGAAG 3 cut(s) 41, 798, 1881
AfaI GTAC 1 cut(s) 872
AfiI CCNNNNNNNGG 1 cut(s) 1681
AflII CTTAAG 2 cut(s) 607, 1964
AflIII ACRYGT 1 cut(s) 451
AhdI GACNNNNNGTC 1 cut(s) 1767
AjnI CCWGG 6 cut(s) 117, 1215, 1424, 1585, 1690, 1958
AjuI GAANNNNNNNTTGG 4 cut(s) 389, 421, 800, 832
Alw21I GWGCWC 1 cut(s) 1388
Alw26I GTCTC 2 cut(s) 1689, 1775
Alw44I GTGCAC 1 cut(s) 1384
AlwI GGATC 5 cut(s) 726, 1321, 2003, 2016, 2120
AlwNI CAGNNNCTG 2 cut(s) 1634, 1959
Ama87I CYCGRG 2 cut(s) 1519, 1772
AoxI GGCC 1 cut(s) 1955
ApaLI GTGCAC 1 cut(s) 1384
ApoI RAATTY 3 cut(s) 146, 1037, 1842
ArsI GACNNNNNNTTYG 2 cut(s) 1449, 1481
Asp700I GAANNNNTTC 3 cut(s) 389, 673, 1211
AspLEI GCGC 1 cut(s) 906
AspS9I GGNCC 3 cut(s) 285, 1956, 2255
AsuC2I CCSGG 2 cut(s) 791, 1500
AsuHPI GGTGA 5 cut(s) 224, 280, 329, 662, 1132
AsuII TTCGAA 1 cut(s) 637
AvaI CYCGRG 2 cut(s) 1519, 1772
AvaII GGWCC 2 cut(s) 285, 2255
BaeGI GKGCMC 2 cut(s) 1388, 1570
BamHI GGATCC 1 cut(s) 2008
BanII GRGCYC 1 cut(s) 1854
BbsI GAAGAC 3 cut(s) 29, 1098, 1699
Bbv12I GWGCWC 1 cut(s) 1388
BccI CCATC 9 cut(s) 308, 413, 488, 1247, 1877, 1914, 2026, 2101, 2137
BceAI ACGGC 1 cut(s) 1412
BciT130I CCWGG 6 cut(s) 119, 1217, 1426, 1587, 1692, 1960
BciVI GTATCC 2 cut(s) 53, 1988
BclI TGATCA 2 cut(s) 484, 526
BcnI CCSGG 2 cut(s) 791, 1500
BcoDI GTCTC 2 cut(s) 1689, 1775
BfaI CTAG 2 cut(s) 845, 1869
BfmI CTRYAG 3 cut(s) 186, 1166, 1476
BfrI CTTAAG 2 cut(s) 607, 1964
BfuAI ACCTGC 2 cut(s) 1827, 1926
BfuI GTATCC 2 cut(s) 53, 1988
Bme1390I CCNGG 8 cut(s) 119, 791, 1217, 1426, 1500, 1587, 1692, 1960
Bme18I GGWCC 2 cut(s) 285, 2255
BmeRI GACNNNNNGTC 1 cut(s) 1767
BmeT110I CYCGRG 2 cut(s) 1519, 1772
BmgT120I GGNCC 3 cut(s) 285, 1956, 2255
BmiI GGNNCC 2 cut(s) 1686, 2010
BmrFI CCNGG 8 cut(s) 119, 791, 1217, 1426, 1500, 1587, 1692, 1960
BmrI ACTGGG 3 cut(s) 1333, 1888, 2216
BmsI GCATC 7 cut(s) 267, 310, 867, 874, 1525, 1636, 1926
BmuI ACTGGG 3 cut(s) 1333, 1888, 2216
BpiI GAAGAC 3 cut(s) 29, 1098, 1699
BpmI CTGGAG 1 cut(s) 1713
Bpu14I TTCGAA 1 cut(s) 637
BpuEI CTTGAG 3 cut(s) 1205, 1419, 2256
BpuMI CCSGG 2 cut(s) 791, 1500
BsaI GGTCTC 1 cut(s) 1775
BsaJI CCNNGG 6 cut(s) 117, 1394, 1425, 1586, 1958, 1972
BsaWI WCCGGW 1 cut(s) 70
Bsc4I CCNNNNNNNGG 1 cut(s) 1681
Bse118I RCCGGY 1 cut(s) 265
Bse1I ACTGG 4 cut(s) 1315, 1339, 1883, 2211
Bse3DI GCAATG 4 cut(s) 50, 239, 267, 1890
BseBI CCWGG 6 cut(s) 119, 1217, 1426, 1587, 1692, 1960
BseDI CCNNGG 6 cut(s) 117, 1394, 1425, 1586, 1958, 1972
BseGI GGATG 8 cut(s) 279, 499, 736, 882, 1135, 1159, 1888, 2112
BseLI CCNNNNNNNGG 1 cut(s) 1681
BseMI GCAATG 4 cut(s) 50, 239, 267, 1890
BseMII CTCAG 2 cut(s) 858, 1818
BseNI ACTGG 4 cut(s) 1315, 1339, 1883, 2211
BseRI GAGGAG 3 cut(s) 641, 914, 1235
BseSI GKGCMC 2 cut(s) 1388, 1570
Bsh1236I CGCG 1 cut(s) 906
BshFI GGCC 1 cut(s) 1957
BsiHKAI GWGCWC 1 cut(s) 1388
BsiHKCI CYCGRG 2 cut(s) 1519, 1772
BsiSI CCGG 4 cut(s) 71, 266, 790, 1500
BslFI GGGAC 3 cut(s) 584, 1788, 2224
BslI CCNNNNNNNGG 1 cut(s) 1681
BsmAI GTCTC 2 cut(s) 1689, 1775
BsmFI GGGAC 3 cut(s) 584, 1788, 2224
BsnI GGCC 1 cut(s) 1957
Bso31I GGTCTC 1 cut(s) 1775
BsoBI CYCGRG 2 cut(s) 1519, 1772
Bsp119I TTCGAA 1 cut(s) 637
Bsp1286I GDGCHC 3 cut(s) 1388, 1570, 1854
BspACI CCGC 5 cut(s) 283, 323, 906, 1594, 2104
BspANI GGCC 1 cut(s) 1957
BspCNI CTCAG 2 cut(s) 859, 1819
BspFNI CGCG 1 cut(s) 906
BspHI TCATGA 2 cut(s) 487, 1252
BspLI GGNNCC 2 cut(s) 1686, 2010
BspMAI CTGCAG 2 cut(s) 190, 1170
BspMI ACCTGC 2 cut(s) 1827, 1926
BspPI GGATC 5 cut(s) 726, 1321, 2003, 2016, 2120
BspQI GCTCTTC 1 cut(s) 664
BspT104I TTCGAA 1 cut(s) 637
BspTI CTTAAG 2 cut(s) 607, 1964
BspTNI GGTCTC 1 cut(s) 1775
BsrDI GCAATG 4 cut(s) 50, 239, 267, 1890
BsrFI RCCGGY 1 cut(s) 265
BsrI ACTGG 4 cut(s) 1315, 1339, 1883, 2211
BssAI RCCGGY 1 cut(s) 265
BssECI CCNNGG 6 cut(s) 117, 1394, 1425, 1586, 1958, 1972
BssT1I CCWWGG 1 cut(s) 1972
Bst2UI CCWGG 6 cut(s) 119, 1217, 1426, 1587, 1692, 1960
Bst4CI ACNGT 3 cut(s) 370, 962, 2049
Bst6I CTCTTC 6 cut(s) 392, 507, 560, 618, 664, 917
BstAFI CTTAAG 2 cut(s) 607, 1964
BstAPI GCANNNNNTGC 3 cut(s) 185, 469, 1658
BstBI TTCGAA 1 cut(s) 637
BstC8I GCNNGC 3 cut(s) 1473, 1741, 1836
BstDEI CTNAG 4 cut(s) 867, 1642, 1827, 2139
BstDSI CCRYGG 1 cut(s) 1394
BstF5I GGATG 8 cut(s) 279, 499, 736, 882, 1135, 1159, 1888, 2112
BstFNI CGCG 1 cut(s) 906
BstHHI GCGC 1 cut(s) 906
BstMAI GTCTC 2 cut(s) 1689, 1775
BstMWI GCNNNNNNNGC 8 cut(s) 185, 469, 1631, 1655, 1658, 1828, 2063, 2185
BstNI CCWGG 6 cut(s) 119, 1217, 1426, 1587, 1692, 1960
BstSCI CCNGG 8 cut(s) 117, 789, 1215, 1424, 1498, 1585, 1690, 1958
BstSFI CTRYAG 3 cut(s) 186, 1166, 1476
BstSLI GKGCMC 2 cut(s) 1388, 1570
BstUI CGCG 1 cut(s) 906
BstV2I GAAGAC 3 cut(s) 29, 1098, 1699
BstX2I RGATCY 2 cut(s) 1313, 2008
BstYI RGATCY 2 cut(s) 1313, 2008
BsuI GTATCC 2 cut(s) 53, 1988
BsuRI GGCC 1 cut(s) 1957
BtgI CCRYGG 1 cut(s) 1394
BtsCI GGATG 8 cut(s) 279, 499, 736, 882, 1135, 1159, 1888, 2112
BtsIMutI CAGTG 4 cut(s) 375, 774, 864, 2204
BveI ACCTGC 2 cut(s) 1827, 1926
Cac8I GCNNGC 3 cut(s) 1473, 1741, 1836
CaiI CAGNNNCTG 2 cut(s) 1634, 1959
CciI TCATGA 2 cut(s) 487, 1252
CfoI GCGC 1 cut(s) 906
Cfr10I RCCGGY 1 cut(s) 265
Cfr13I GGNCC 3 cut(s) 285, 1956, 2255
CseI GACGC 2 cut(s) 147, 581
Csp6I GTAC 1 cut(s) 871
CviAII CATG 9 cut(s) 27, 488, 1253, 1349, 1370, 1460, 1676, 1982, 2252
CviQI GTAC 1 cut(s) 871
DdeI CTNAG 4 cut(s) 867, 1642, 1827, 2139
DrdI GACNNNNNNGTC 4 cut(s) 31, 140, 1703, 2170
DriI GACNNNNNGTC 1 cut(s) 1767
DseDI GACNNNNNNGTC 4 cut(s) 31, 140, 1703, 2170
Eam1104I CTCTTC 6 cut(s) 392, 507, 560, 618, 664, 917
Eam1105I GACNNNNNGTC 1 cut(s) 1767
EarI CTCTTC 6 cut(s) 392, 507, 560, 618, 664, 917
EciI GGCGGA 1 cut(s) 2119
Eco130I CCWWGG 1 cut(s) 1972
Eco24I GRGCYC 1 cut(s) 1854
Eco31I GGTCTC 1 cut(s) 1775
Eco32I GATATC 2 cut(s) 193, 1785
Eco47I GGWCC 2 cut(s) 285, 2255
Eco57I CTGAAG 3 cut(s) 41, 798, 1881
Eco88I CYCGRG 2 cut(s) 1519, 1772
EcoO109I RGGNCCY 1 cut(s) 1956
EcoRII CCWGG 6 cut(s) 117, 1215, 1424, 1585, 1690, 1958
EcoRV GATATC 2 cut(s) 193, 1785
EcoT14I CCWWGG 1 cut(s) 1972
EcoT38I GRGCYC 1 cut(s) 1854
ErhI CCWWGG 1 cut(s) 1972
FaeI CATG 9 cut(s) 30, 491, 1256, 1352, 1373, 1463, 1679, 1985, 2255
FalI AAGNNNNNCTT 6 cut(s) 590, 622, 658, 690, 2181, 2213
FaqI GGGAC 3 cut(s) 584, 1788, 2224
FatI CATG 9 cut(s) 26, 487, 1252, 1348, 1369, 1459, 1675, 1981, 2251
FbaI TGATCA 2 cut(s) 484, 526
FokI GGATG 8 cut(s) 286, 506, 743, 889, 1142, 1166, 1895, 2119
FriOI GRGCYC 1 cut(s) 1854
FspBI CTAG 2 cut(s) 845, 1869
GlaI GCGC 1 cut(s) 905
GsuI CTGGAG 1 cut(s) 1713
HaeIII GGCC 1 cut(s) 1957
HapII CCGG 4 cut(s) 71, 266, 790, 1500
HgaI GACGC 2 cut(s) 147, 581
HhaI GCGC 1 cut(s) 906
Hin1II CATG 9 cut(s) 30, 491, 1256, 1352, 1373, 1463, 1679, 1985, 2255
Hin6I GCGC 1 cut(s) 904
HinP1I GCGC 1 cut(s) 904
HincII GTYRAC 1 cut(s) 2088
HindII GTYRAC 1 cut(s) 2088
HindIII AAGCTT 2 cut(s) 137, 1451
HinfI GANTC 6 cut(s) 302, 390, 503, 1187, 1333, 1887
HpaII CCGG 4 cut(s) 71, 266, 790, 1500
HphI GGTGA 5 cut(s) 224, 280, 329, 662, 1132
Hpy166II GTNNAC 5 cut(s) 133, 1173, 1386, 2088, 2244
Hpy188III TCNNGA 9 cut(s) 394, 488, 678, 845, 1253, 1436, 1519, 1721, 1774
Hpy8I GTNNAC 5 cut(s) 133, 1173, 1386, 2088, 2244
HpyAV CCTTC 3 cut(s) 653, 755, 1856
HpyCH4III ACNGT 3 cut(s) 370, 962, 2049
HpyCH4IV ACGT 2 cut(s) 451, 748
HpyF10VI GCNNNNNNNGC 8 cut(s) 185, 469, 1631, 1655, 1658, 1828, 2063, 2185
HpyF3I CTNAG 4 cut(s) 867, 1642, 1827, 2139
HpySE526I ACGT 2 cut(s) 451, 748
Hsp92II CATG 9 cut(s) 30, 491, 1256, 1352, 1373, 1463, 1679, 1985, 2255
HspAI GCGC 1 cut(s) 904
Ksp22I TGATCA 2 cut(s) 484, 526
LguI GCTCTTC 1 cut(s) 664
LmnI GCTCC 4 cut(s) 550, 820, 901, 1269
LweI GCATC 7 cut(s) 267, 310, 867, 874, 1525, 1636, 1926
MaeI CTAG 2 cut(s) 845, 1869
MaeII ACGT 2 cut(s) 451, 748
MaeIII GTNAC 7 cut(s) 364, 749, 800, 862, 910, 1898, 2284
MfeI CAATTG 1 cut(s) 1653
MflI RGATCY 2 cut(s) 1313, 2008
MhlI GDGCHC 3 cut(s) 1388, 1570, 1854
MlyI GAGTC 3 cut(s) 512, 1196, 1896
MmeI TCCRAC 1 cut(s) 279
MroXI GAANNNNTTC 3 cut(s) 389, 673, 1211
MslI CAYNNNNRTG 1 cut(s) 492
MspA1I CMGCKG 1 cut(s) 283
MspCI CTTAAG 2 cut(s) 607, 1964
MspI CCGG 4 cut(s) 71, 266, 790, 1500
MspR9I CCNGG 8 cut(s) 119, 791, 1217, 1426, 1500, 1587, 1692, 1960
MunI CAATTG 1 cut(s) 1653
MvaI CCWGG 6 cut(s) 119, 1217, 1426, 1587, 1692, 1960
MvnI CGCG 1 cut(s) 906
MwoI GCNNNNNNNGC 8 cut(s) 185, 469, 1631, 1655, 1658, 1828, 2063, 2185
NciI CCSGG 2 cut(s) 791, 1500
NlaIII CATG 9 cut(s) 30, 491, 1256, 1352, 1373, 1463, 1679, 1985, 2255
NlaIV GGNNCC 2 cut(s) 1686, 2010
NmuCI GTSAC 2 cut(s) 862, 1898
NspV TTCGAA 1 cut(s) 637
PaeR7I CTCGAG 1 cut(s) 1519
PagI TCATGA 2 cut(s) 487, 1252
PciSI GCTCTTC 1 cut(s) 664
PcsI WCGNNNNNNNCGW 1 cut(s) 1946
PdmI GAANNNNTTC 3 cut(s) 389, 673, 1211
PfeI GAWTC 3 cut(s) 302, 390, 1333
PfoI TCCNGGA 1 cut(s) 1215
PleI GAGTC 3 cut(s) 511, 1195, 1895
PpsI GAGTC 3 cut(s) 511, 1195, 1895
Psp1406I AACGTT 1 cut(s) 748
Psp6I CCWGG 6 cut(s) 117, 1215, 1424, 1585, 1690, 1958
PspGI CCWGG 6 cut(s) 117, 1215, 1424, 1585, 1690, 1958
PspN4I GGNNCC 2 cut(s) 1686, 2010
PspPI GGNCC 3 cut(s) 285, 1956, 2255
PstI CTGCAG 2 cut(s) 190, 1170
PstNI CAGNNNCTG 2 cut(s) 1634, 1959
PsuI RGATCY 2 cut(s) 1313, 2008
RsaI GTAC 1 cut(s) 872
RsaNI GTAC 1 cut(s) 871
RseI CAYNNNNRTG 1 cut(s) 492
SapI GCTCTTC 1 cut(s) 664
Sau96I GGNCC 3 cut(s) 285, 1956, 2255
SchI GAGTC 3 cut(s) 512, 1196, 1896
ScrFI CCNGG 8 cut(s) 119, 791, 1217, 1426, 1500, 1587, 1692, 1960
SduI GDGCHC 3 cut(s) 1388, 1570, 1854
SfaNI GCATC 7 cut(s) 267, 310, 867, 874, 1525, 1636, 1926
SfcI CTRYAG 3 cut(s) 186, 1166, 1476
Sfr274I CTCGAG 1 cut(s) 1519
SfuI TTCGAA 1 cut(s) 637
SinI GGWCC 2 cut(s) 285, 2255
SlaI CTCGAG 1 cut(s) 1519
SmiMI CAYNNNNRTG 1 cut(s) 492
SmlI CTYRAG 6 cut(s) 607, 1184, 1434, 1519, 1964, 2271
SmoI CTYRAG 6 cut(s) 607, 1184, 1434, 1519, 1964, 2271
SsiI CCGC 5 cut(s) 283, 323, 906, 1594, 2104
SspI AATATT 1 cut(s) 816
SspMI CTAG 2 cut(s) 845, 1869
StyD4I CCNGG 8 cut(s) 117, 789, 1215, 1424, 1498, 1585, 1690, 1958
StyI CCWWGG 1 cut(s) 1972
TaaI ACNGT 3 cut(s) 370, 962, 2049
TaiI ACGT 2 cut(s) 454, 751
TaqII GACCGA 1 cut(s) 2272
TatI WGTACW 1 cut(s) 870
TfiI GAWTC 3 cut(s) 302, 390, 1333
TscAI CASTG 4 cut(s) 375, 781, 871, 2211
TseFI GTSAC 2 cut(s) 862, 1898
Tsp45I GTSAC 2 cut(s) 862, 1898
TspDTI ATGAA 4 cut(s) 759, 992, 1104, 1241
TspGWI ACGGA 1 cut(s) 2208
TspRI CASTG 4 cut(s) 375, 781, 871, 2211
Vha464I CTTAAG 2 cut(s) 607, 1964
VneI GTGCAC 1 cut(s) 1384
VpaK11BI GGWCC 2 cut(s) 285, 2255
XapI RAATTY 3 cut(s) 146, 1037, 1842
XbaI TCTAGA 1 cut(s) 844
XhoI CTCGAG 1 cut(s) 1519
XmnI GAANNNNTTC 3 cut(s) 389, 673, 1211
XspI CTAG 2 cut(s) 845, 1869
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.