Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000176

Orthogroup ID

OG0000463

Physical Location & Seq

Genomic Coordinates Forward (+)

438469 .. 454937

Gene Structure 16469 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_176G00431160.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1134 bp

ATGCAGAGTCCAGATGGTCATAAACTTCTCGGGCCTATTGACAGTGCCGATGGATCCATCGATCTAGCTCTTGGGTCAAGTGTCGACTATCATTGGAACCGGATTTTGGGCACTAAAATGAGGGAAGGCTGTTTTGTTGCTTGGTGGAGGCCTAAAGGGAGGATCGACTCACTCTCTCTCCCACCTGCCGCCGCCAAAACCCGGAGAAGGAAGAAAAGAAACAGAGCGGTGTTCTTCAAGCTTGCTCTTCCACCACGAACTCGCCTCGCCTTGCGAAGCCACCCGTGGCGCCTTGGCTCACGGCTCGGCCGGAACGGTGGCGATGGAGTAGGGTTCGTACGGCCCCAATTTGGTTCCAAGCATGGTGAGTTGAACTACCGCCACGAAACCATTCCAAACTTCACTCGCAGGTTCGCCTCGACCTTCGAAGCCCCGGAACCACCCTTGCACGGCGGCCGCCTCCGGAAGCGGCTAGAACTCGAACCGGATTTGCACCCGAAACCTTCAAACAGCTTGAAATTGAAGATGTCATCATCCTCGTCTTCTCTGCAAGTTGGTTCGGAGCCCAGCAAGTCAGATCCCGATAAGAAAAGGCGCCGGAGTGAGGCTTGGAGTCAAGAAGACGATGAAGAGATTGTTCCTCCACACCTGAAAGATCAAGTTAAAAGTATAAGAAGTTCAGCTGATAATGATGATGATGCAGCAGCTGCTAAAGTTGATGATGATGAACAAGTGCAGCAATTCAATTCGGAGCTATTTGAGAAGCTCCAGGAGGATAGAAAAGCACTACCCATTTACAGATTTCGCGATGCATTGCTCGACTATGTTCAAGCGAATCAGATACCCCAATATCTACACGAGGCCGGATATAGCAAAAAAGGGATAATTGGGTGCACACAGCCACATGGAGTTGTTGCTATGAGTGCTGCTTTCAGAGTTTCTAAAGAAGTGGGTGTCAAGCTCGGGCATGAGGTAGGATATTCCATTCCTTCTAAGGATTGCACATCTGAAAAGACTGTTTTGAGATATATGACAGATGAAACGTTGTTGCATGAACTCTATGGTGAACCAGATTTGATAAGCTATAGTGTGTTGGTGGTGGATGGGGCCGATGAGAGAACCCCTCTCAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DEAD HA2 Helicase_C OB_NTP_bind

Protein Analysis

377

Amino Acids

42.35

Weight (kDa)

9.02

Isoelectric Point (pI)

49.22

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000463)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32490 AT1G32490 AT2G35340 AT2G35340 AT4G16680 AT4G16680
fragaria_vesca	FvH4_1g06760 FvH4_1g06761 FvH4_1g06770 FvH4_3g40380 FvH4_3g40450 FvH4_5g14240 FvH4_5g14240 FvH4_5g14240 FvH4_5g14240 FvH4_7g01330 FvH4_7g01330
malus_domestica	MD02G1072400.v1.1 MD02G1072500.v1.1 MD02G1088100.v1.1 MD06G1200100.v1.1 MD07G1285300.v1.1 MD08G1042900.v1.1
prunus_persica	Prupe.5G201700_v2.0.a1 Prupe.5G201700_v2.0.a1 Prupe.6G014300_v2.0.a1 Prupe.6G159800_v2.0.a1 Prupe.7G201500_v2.0.a1 Prupe.8G103900_v2.0.a1 Prupe.8G104500_v2.0.a1
pyrus_communis	pycom02g05640 pycom02g05650 pycom14g17310
rosa_chinensis	RchiOBHm_Chr2g0092491 RchiOBHm_Chr2g0092541 RchiOBHm_Chr5g0073091 RchiOBHm_Chr6g0263651 RchiOBHm_Chr6g0263711 RchiOBHm_Chr7g0182681
rosa_laevigata	RLG00000005109 RLG00000014320 RLG00000014322 RLG00000014324 RLG00000014326 RLG00000014327 RLG00000016318 RLG00000016322 RLG00000036362
rosa_multiflora	Rmu_sc0000014.1_g000045 Rmu_sc0002174.1_g000001 Rmu_sc0003570.1_g000001 Rmu_sc0004296.1_g000005 Rmu_sc0004296.1_g000014 Rmu_sc0005592.1_g000025
rosa_roxburghii	Rroxscaffold_176G00431160 Rroxscaffold_176G00431170 Rroxscaffold_2G00148990 Rroxscaffold_2G00149040 Rroxscaffold_3G00271070 Rroxscaffold_6G00409880 Rroxscaffold_7G00204020 Rroxscaffold_7G00204040 Rroxscaffold_7G00204070
rosa_rugosa	Rorug02G0027100 Rorug02G0027200 Rorug02G0027300 Rorug05G0421000 Rorug06G0449100
rosa_samantha	Rh2AG072900 Rh2AG073200 Rh2BG073500 Rh2BG074100 Rh2CG074700 Rh2DG071600 Rh2DG072300 Rh5AG478000 Rh5BG498700 Rh5DG510800 Rh6AG125300 Rh6BG121400 Rh6CG119800 Rh7AG052900 Rh7BG052500 Rh7CG054000 Rh7DG052300
rosa_wichuraiana	Rw0G005280 Rw2G005970 Rw2G006000 Rw5G044390 Rw6G010890 Rw7G004310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	193
Acc36I	ACCTGC	2 cut(s)	193, 399
AccB1I	GGYRCC	2 cut(s)	288, 594
AccBSI	CCGCTC	1 cut(s)	227
AccI	GTMKAC	1 cut(s)	84
AccII	CGCG	1 cut(s)	807
AccIII	TCCGGA	1 cut(s)	462
AciI	CCGC	7 cut(s)	189, 192, 227, 379, 453, 457, 469
AclI	AACGTT	1 cut(s)	1043
AclWI	GGATC	4 cut(s)	48, 61, 170, 572
AcoI	YGGCCR	2 cut(s)	307, 454
AcyI	GRCGYC	2 cut(s)	289, 595
AfaI	GTAC	1 cut(s)	339
AfiI	CCNNNNNNNGG	6 cut(s)	106, 201, 207, 350, 449, 604
AgsI	TTSAA	7 cut(s)	238, 373, 507, 517, 523, 745, 830
AjnI	CCWGG	1 cut(s)	768
AjuI	GAANNNNNNNTTGG	2 cut(s)	89, 121
AluBI	AGCT	9 cut(s)	68, 241, 513, 683, 707, 754, 766, 961, 1083
AluI	AGCT	9 cut(s)	68, 241, 513, 683, 707, 754, 766, 961, 1083
Alw21I	GWGCWC	1 cut(s)	896
Alw44I	GTGCAC	1 cut(s)	892
AlwI	GGATC	4 cut(s)	48, 61, 170, 572
AlwNI	CAGNNNCTG	1 cut(s)	707
Ama87I	CYCGRG	2 cut(s)	29, 962
Aor13HI	TCCGGA	1 cut(s)	462
AoxI	GGCC	7 cut(s)	32, 149, 307, 341, 454, 861, 1107
ApaLI	GTGCAC	1 cut(s)	892
ApeKI	GCWGC	5 cut(s)	701, 704, 707, 736, 926
Asp700I	GAANNNNTTC	1 cut(s)	390
AspLEI	GCGC	2 cut(s)	291, 597
AspS9I	GGNCC	3 cut(s)	32, 342, 1107
AsuC2I	CCSGG	2 cut(s)	202, 434
AsuHPI	GGTGA	2 cut(s)	377, 1076
AsuII	TTCGAA	1 cut(s)	426
AvaI	CYCGRG	2 cut(s)	29, 962
BaeGI	GKGCMC	2 cut(s)	113, 896
BamHI	GGATCC	1 cut(s)	53
BanI	GGYRCC	2 cut(s)	288, 594
BanII	GRGCYC	1 cut(s)	567
BauI	CACGAG	1 cut(s)	857
BbsI	GAAGAC	2 cut(s)	534, 627
Bbv12I	GWGCWC	1 cut(s)	896
BbvI	GCAGC	5 cut(s)	694, 713, 716, 748, 913
BccI	CCATC	5 cut(s)	8, 44, 65, 317, 1097
BceAI	ACGGC	3 cut(s)	317, 356, 466
BciT130I	CCWGG	1 cut(s)	770
BcnI	CCSGG	2 cut(s)	202, 434
BfaI	CTAG	2 cut(s)	65, 473
BfmI	CTRYAG	1 cut(s)	1084
BfoI	RGCGCY	2 cut(s)	292, 598
BfuAI	ACCTGC	2 cut(s)	193, 399
Bme1390I	CCNGG	3 cut(s)	202, 434, 770
BmeT110I	CYCGRG	2 cut(s)	29, 962
BmgT120I	GGNCC	3 cut(s)	32, 342, 1107
BmiI	GGNNCC	9 cut(s)	55, 98, 290, 344, 355, 438, 564, 596, 1108
BmrFI	CCNGG	3 cut(s)	202, 434, 770
BmsI	GCATC	2 cut(s)	688, 799
BpiI	GAAGAC	2 cut(s)	534, 627
BplI	GAGNNNNNCTC	1 cut(s)	1108
BpmI	CTGGAG	1 cut(s)	752
Bpu14I	TTCGAA	1 cut(s)	426
BpuMI	CCSGG	2 cut(s)	202, 434
Bsa29I	ATCGAT	1 cut(s)	60
BsaHI	GRCGYC	2 cut(s)	289, 595
BsaJI	CCNNGG	3 cut(s)	284, 292, 432
BsaWI	WCCGGW	3 cut(s)	99, 462, 484
BsaXI	ACNNNNNCTCC	2 cut(s)	162, 192
Bsc4I	CCNNNNNNNGG	6 cut(s)	106, 201, 207, 350, 449, 604
Bse3DI	GCAATG	1 cut(s)	812
BseAI	TCCGGA	1 cut(s)	462
BseBI	CCWGG	1 cut(s)	770
BseCI	ATCGAT	1 cut(s)	60
BseDI	CCNNGG	3 cut(s)	284, 292, 432
BseGI	GGATG	2 cut(s)	533, 1108
BseLI	CCNNNNNNNGG	6 cut(s)	106, 201, 207, 350, 449, 604
BseMI	GCAATG	1 cut(s)	812
BseSI	GKGCMC	2 cut(s)	113, 896
BseX3I	CGGCCG	2 cut(s)	307, 454
BseXI	GCAGC	5 cut(s)	694, 713, 716, 748, 913
BseYI	CCCAGC	1 cut(s)	566
BsgI	GTGCAG	1 cut(s)	755
Bsh1236I	CGCG	1 cut(s)	807
Bsh1285I	CGRYCG	2 cut(s)	310, 457
BshFI	GGCC	7 cut(s)	34, 151, 309, 343, 456, 863, 1109
BshNI	GGYRCC	2 cut(s)	288, 594
BshVI	ATCGAT	1 cut(s)	60
BsiEI	CGRYCG	2 cut(s)	310, 457
BsiHKAI	GWGCWC	1 cut(s)	896
BsiHKCI	CYCGRG	2 cut(s)	29, 962
BsiSI	CCGG	8 cut(s)	100, 202, 310, 434, 463, 485, 598, 864
BsiWI	CGTACG	1 cut(s)	337
BslI	CCNNNNNNNGG	6 cut(s)	106, 201, 207, 350, 449, 604
BsnI	GGCC	7 cut(s)	34, 151, 309, 343, 456, 863, 1109
BsoBI	CYCGRG	2 cut(s)	29, 962
Bsp119I	TTCGAA	1 cut(s)	426
Bsp1286I	GDGCHC	3 cut(s)	113, 567, 896
Bsp13I	TCCGGA	1 cut(s)	462
Bsp143I	GATC	5 cut(s)	53, 61, 162, 577, 655
Bsp68I	TCGCGA	1 cut(s)	807
BspACI	CCGC	7 cut(s)	189, 192, 227, 379, 453, 457, 469
BspANI	GGCC	7 cut(s)	34, 151, 309, 343, 456, 863, 1109
BspDI	ATCGAT	1 cut(s)	60
BspEI	TCCGGA	1 cut(s)	462
BspFNI	CGCG	1 cut(s)	807
BspLI	GGNNCC	9 cut(s)	55, 98, 290, 344, 355, 438, 564, 596, 1108
BspMI	ACCTGC	2 cut(s)	193, 399
BspPI	GGATC	4 cut(s)	48, 61, 170, 572
BspQI	GCTCTTC	1 cut(s)	252
BspT104I	TTCGAA	1 cut(s)	426
BspT107I	GGYRCC	2 cut(s)	288, 594
BsrBI	CCGCTC	1 cut(s)	227
BsrDI	GCAATG	1 cut(s)	812
BssECI	CCNNGG	3 cut(s)	284, 292, 432
BssMI	GATC	5 cut(s)	53, 61, 162, 577, 655
BssNI	GRCGYC	2 cut(s)	289, 595
BssSI	CACGAG	1 cut(s)	857
BssT1I	CCWWGG	1 cut(s)	292
Bst2BI	CACGAG	1 cut(s)	857
Bst2UI	CCWGG	1 cut(s)	770
Bst4CI	ACNGT	3 cut(s)	44, 317, 1018
Bst6I	CTCTTC	2 cut(s)	252, 624
BstACI	GRCGYC	2 cut(s)	289, 595
BstAPI	GCANNNNNTGC	1 cut(s)	707
BstBI	TTCGAA	1 cut(s)	426
BstC8I	GCNNGC	1 cut(s)	243
BstDEI	CTNAG	1 cut(s)	993
BstDSI	CCRYGG	1 cut(s)	284
BstF5I	GGATG	2 cut(s)	533, 1108
BstFNI	CGCG	1 cut(s)	807
BstH2I	RGCGCY	2 cut(s)	292, 598
BstHHI	GCGC	2 cut(s)	291, 597
BstKTI	GATC	5 cut(s)	56, 64, 165, 580, 658
BstMBI	GATC	5 cut(s)	53, 61, 162, 577, 655
BstMCI	CGRYCG	2 cut(s)	310, 457
BstMWI	GCNNNNNNNGC	2 cut(s)	707, 923
BstNI	CCWGG	1 cut(s)	770
BstSCI	CCNGG	3 cut(s)	200, 432, 768
BstSFI	CTRYAG	1 cut(s)	1084
BstSLI	GKGCMC	2 cut(s)	113, 896
BstUI	CGCG	1 cut(s)	807
BstV1I	GCAGC	5 cut(s)	694, 713, 716, 748, 913
BstV2I	GAAGAC	2 cut(s)	534, 627
BstX2I	RGATCY	2 cut(s)	53, 577
BstYI	RGATCY	2 cut(s)	53, 577
BstZI	CGGCCG	2 cut(s)	307, 454
Bsu15I	ATCGAT	1 cut(s)	60
BsuRI	GGCC	7 cut(s)	34, 151, 309, 343, 456, 863, 1109
BsuTUI	ATCGAT	1 cut(s)	60
BtgI	CCRYGG	1 cut(s)	284
BtgZI	GCGATG	2 cut(s)	336, 822
BtsCI	GGATG	2 cut(s)	533, 1108
BtsIMutI	CAGTG	1 cut(s)	49
BtuMI	TCGCGA	1 cut(s)	807
BveI	ACCTGC	2 cut(s)	193, 399
Cac8I	GCNNGC	1 cut(s)	243
CaiI	CAGNNNCTG	1 cut(s)	707
CciNI	GCGGCCGC	1 cut(s)	454
CfoI	GCGC	2 cut(s)	291, 597
Cfr13I	GGNCC	3 cut(s)	32, 342, 1107
ClaI	ATCGAT	1 cut(s)	60
Csp6I	GTAC	1 cut(s)	338
CviAII	CATG	4 cut(s)	362, 905, 968, 1052
CviQI	GTAC	1 cut(s)	338
DdeI	CTNAG	1 cut(s)	993
DinI	GGCGCC	2 cut(s)	290, 596
DpnI	GATC	5 cut(s)	55, 63, 164, 579, 657
DpnII	GATC	5 cut(s)	53, 61, 162, 577, 655
EaeI	YGGCCR	2 cut(s)	307, 454
EagI	CGGCCG	2 cut(s)	307, 454
Eam1104I	CTCTTC	2 cut(s)	252, 624
EarI	CTCTTC	2 cut(s)	252, 624
EclXI	CGGCCG	2 cut(s)	307, 454
Eco130I	CCWWGG	1 cut(s)	292
Eco147I	AGGCCT	1 cut(s)	151
Eco24I	GRGCYC	1 cut(s)	567
Eco52I	CGGCCG	2 cut(s)	307, 454
Eco88I	CYCGRG	2 cut(s)	29, 962
EcoRII	CCWGG	1 cut(s)	768
EcoT14I	CCWWGG	1 cut(s)	292
EcoT22I	ATGCAT	1 cut(s)	814
EcoT38I	GRGCYC	1 cut(s)	567
EgeI	GGCGCC	2 cut(s)	290, 596
EheI	GGCGCC	2 cut(s)	290, 596
ErhI	CCWWGG	1 cut(s)	292
FaeI	CATG	4 cut(s)	365, 908, 971, 1055
FatI	CATG	4 cut(s)	361, 904, 967, 1051
FblI	GTMKAC	1 cut(s)	84
FokI	GGATG	2 cut(s)	520, 1115
FriOI	GRGCYC	1 cut(s)	567
FspBI	CTAG	2 cut(s)	65, 473
GlaI	GCGC	2 cut(s)	290, 596
GsaI	CCCAGC	1 cut(s)	570
GsuI	CTGGAG	1 cut(s)	752
HaeII	RGCGCY	2 cut(s)	292, 598
HaeIII	GGCC	7 cut(s)	34, 151, 309, 343, 456, 863, 1109
HapII	CCGG	8 cut(s)	100, 202, 310, 434, 463, 485, 598, 864
HhaI	GCGC	2 cut(s)	291, 597
Hin1I	GRCGYC	2 cut(s)	289, 595
Hin1II	CATG	4 cut(s)	365, 908, 971, 1055
Hin6I	GCGC	2 cut(s)	289, 595
HinP1I	GCGC	2 cut(s)	289, 595
HincII	GTYRAC	1 cut(s)	85
HindII	GTYRAC	1 cut(s)	85
HindIII	AAGCTT	1 cut(s)	239
HinfI	GANTC	4 cut(s)	7, 167, 613, 835
HpaII	CCGG	8 cut(s)	100, 202, 310, 434, 463, 485, 598, 864
HphI	GGTGA	2 cut(s)	377, 1076
Hpy166II	GTNNAC	3 cut(s)	85, 894, 1067
Hpy188I	TCNGA	6 cut(s)	562, 577, 751, 840, 935, 1009
Hpy188III	TCNNGA	5 cut(s)	11, 463, 581, 617, 806
Hpy8I	GTNNAC	3 cut(s)	85, 894, 1067
HpyAV	CCTTC	5 cut(s)	119, 201, 433, 513, 999
HpyCH4III	ACNGT	3 cut(s)	44, 317, 1018
HpyCH4IV	ACGT	1 cut(s)	1043
HpyF10VI	GCNNNNNNNGC	2 cut(s)	707, 923
HpyF3I	CTNAG	1 cut(s)	993
HpySE526I	ACGT	1 cut(s)	1043
Hsp92I	GRCGYC	2 cut(s)	289, 595
Hsp92II	CATG	4 cut(s)	365, 908, 971, 1055
HspAI	GCGC	2 cut(s)	289, 595
KasI	GGCGCC	2 cut(s)	288, 594
Kpn2I	TCCGGA	1 cut(s)	462
Kzo9I	GATC	5 cut(s)	53, 61, 162, 577, 655
LguI	GCTCTTC	1 cut(s)	252
LmnI	GCTCC	3 cut(s)	562, 751, 771
Lsp1109I	GCAGC	5 cut(s)	694, 713, 716, 748, 913
LweI	GCATC	2 cut(s)	688, 799
MaeI	CTAG	2 cut(s)	65, 473
MaeII	ACGT	1 cut(s)	1043
MalI	GATC	5 cut(s)	55, 63, 164, 579, 657
MbiI	CCGCTC	1 cut(s)	227
MboI	GATC	5 cut(s)	53, 61, 162, 577, 655
MboII	GAAGA	7 cut(s)	223, 226, 239, 534, 535, 632, 641
MflI	RGATCY	2 cut(s)	53, 577
MhlI	GDGCHC	3 cut(s)	113, 567, 896
MluCI	AATT	5 cut(s)	347, 518, 740, 745, 885
Mly113I	GGCGCC	2 cut(s)	289, 595
MlyI	GAGTC	3 cut(s)	16, 161, 622
Mph1103I	ATGCAT	1 cut(s)	814
MroI	TCCGGA	1 cut(s)	462
MroXI	GAANNNNTTC	1 cut(s)	390
MseI	TTAA	1 cut(s)	663
MslI	CAYNNNNRTG	1 cut(s)	116
MspA1I	CMGCKG	2 cut(s)	683, 707
MspI	CCGG	8 cut(s)	100, 202, 310, 434, 463, 485, 598, 864
MspR9I	CCNGG	3 cut(s)	202, 434, 770
MvaI	CCWGG	1 cut(s)	770
MvnI	CGCG	1 cut(s)	807
MwoI	GCNNNNNNNGC	2 cut(s)	707, 923
NarI	GGCGCC	2 cut(s)	289, 595
NciI	CCSGG	2 cut(s)	202, 434
NdeII	GATC	5 cut(s)	53, 61, 162, 577, 655
NlaIII	CATG	4 cut(s)	365, 908, 971, 1055
NlaIV	GGNNCC	9 cut(s)	55, 98, 290, 344, 355, 438, 564, 596, 1108
NmeAIII	GCCGAG	1 cut(s)	285
NotI	GCGGCCGC	1 cut(s)	454
NruI	TCGCGA	1 cut(s)	807
NsiI	ATGCAT	1 cut(s)	814
NspV	TTCGAA	1 cut(s)	426
PaqCI	CACCTGC	1 cut(s)	193
PceI	AGGCCT	1 cut(s)	151
PciSI	GCTCTTC	1 cut(s)	252
PdmI	GAANNNNTTC	1 cut(s)	390
PfeI	GAWTC	1 cut(s)	835
Pfl23II	CGTACG	1 cut(s)	337
PfoI	TCCNGGA	1 cut(s)	768
PleI	GAGTC	3 cut(s)	15, 161, 621
PluTI	GGCGCC	2 cut(s)	292, 598
PpsI	GAGTC	3 cut(s)	15, 161, 621
Psp1406I	AACGTT	1 cut(s)	1043
Psp6I	CCWGG	1 cut(s)	768
PspFI	CCCAGC	1 cut(s)	566
PspGI	CCWGG	1 cut(s)	768
PspLI	CGTACG	1 cut(s)	337
PspN4I	GGNNCC	9 cut(s)	55, 98, 290, 344, 355, 438, 564, 596, 1108
PspPI	GGNCC	3 cut(s)	32, 342, 1107
PsrI	GAACNNNNNNTAC	2 cut(s)	661, 693
PstNI	CAGNNNCTG	1 cut(s)	707
PsuI	RGATCY	2 cut(s)	53, 577
PvuII	CAGCTG	2 cut(s)	683, 707
RruI	TCGCGA	1 cut(s)	807
RsaI	GTAC	1 cut(s)	339
RsaNI	GTAC	1 cut(s)	338
RseI	CAYNNNNRTG	1 cut(s)	116
SalI	GTCGAC	1 cut(s)	83
SapI	GCTCTTC	1 cut(s)	252
SaqAI	TTAA	1 cut(s)	663
Sau3AI	GATC	5 cut(s)	53, 61, 162, 577, 655
Sau96I	GGNCC	3 cut(s)	32, 342, 1107
SchI	GAGTC	3 cut(s)	16, 161, 622
ScrFI	CCNGG	3 cut(s)	202, 434, 770
SduI	GDGCHC	3 cut(s)	113, 567, 896
SfaNI	GCATC	2 cut(s)	688, 799
SfcI	CTRYAG	1 cut(s)	1084
SfoI	GGCGCC	2 cut(s)	290, 596
SfuI	TTCGAA	1 cut(s)	426
SmiMI	CAYNNNNRTG	1 cut(s)	116
Sse9I	AATT	5 cut(s)	347, 518, 740, 745, 885
SseBI	AGGCCT	1 cut(s)	151
SsiI	CCGC	7 cut(s)	189, 192, 227, 379, 453, 457, 469
SspDI	GGCGCC	2 cut(s)	288, 594
SspMI	CTAG	2 cut(s)	65, 473
StuI	AGGCCT	1 cut(s)	151
StyD4I	CCNGG	3 cut(s)	200, 432, 768
StyI	CCWWGG	1 cut(s)	292
TaaI	ACNGT	3 cut(s)	44, 317, 1018
TaiI	ACGT	1 cut(s)	1046
TaqI	TCGA	7 cut(s)	60, 84, 165, 419, 426, 480, 819
TasI	AATT	5 cut(s)	347, 518, 740, 745, 885
TauI	GCSGC	5 cut(s)	191, 194, 456, 459, 472
TfiI	GAWTC	1 cut(s)	835
Tru1I	TTAA	1 cut(s)	663
Tru9I	TTAA	1 cut(s)	663
TscAI	CASTG	1 cut(s)	49
TseI	GCWGC	5 cut(s)	701, 704, 707, 736, 926
TspDTI	ATGAA	4 cut(s)	642, 741, 1053, 1068
TspRI	CASTG	1 cut(s)	49
VneI	GTGCAC	1 cut(s)	892
XmiI	GTMKAC	1 cut(s)	84
XmnI	GAANNNNTTC	1 cut(s)	390
XspI	CTAG	2 cut(s)	65, 473
Zsp2I	ATGCAT	1 cut(s)	814

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.