Pre-mRNA-splicing factor ATP-dependent RNA helicase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1155 |
| AarI | CACCTGC | 1 cut(s) | 1423 |
| Acc16I | TGCGCA | 1 cut(s) | 1626 |
| Acc36I | ACCTGC | 2 cut(s) | 1032, 1423 |
| AccB1I | GGYRCC | 2 cut(s) | 69, 2005 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1166 |
| AccI | GTMKAC | 1 cut(s) | 1945 |
| AciI | CCGC | 4 cut(s) | 796, 1469, 1502, 2075 |
| AclWI | GGATC | 4 cut(s) | 47, 1491, 1665, 1909 |
| AcsI | RAATTY | 1 cut(s) | 1702 |
| AcuI | CTGAAG | 2 cut(s) | 1011, 1440 |
| AcyI | GRCGYC | 1 cut(s) | 70 |
| AfaI | GTAC | 4 cut(s) | 1014, 1329, 1523, 2100 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 79, 905, 1166, 1958, 1959, 1984, 2015 |
| AflII | CTTAAG | 1 cut(s) | 701 |
| AgeI | ACCGGT | 2 cut(s) | 1568, 1862 |
| AgsI | TTSAA | 9 cut(s) | 220, 305, 760, 824, 881, 967, 1040, 1515, 2066 |
| AjiI | CACGTC | 1 cut(s) | 1983 |
| AjnI | CCWGG | 3 cut(s) | 243, 1073, 1129 |
| AleI | CACNNNNGTG | 1 cut(s) | 1717 |
| Alw21I | GWGCWC | 3 cut(s) | 416, 1815, 1977 |
| Alw26I | GTCTC | 1 cut(s) | 2023 |
| Alw44I | GTGCAC | 1 cut(s) | 412 |
| AlwI | GGATC | 4 cut(s) | 47, 1491, 1665, 1909 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 182 |
| Ama87I | CYCGRG | 2 cut(s) | 482, 1957 |
| AoxI | GGCC | 4 cut(s) | 381, 627, 1110, 1251 |
| ApaLI | GTGCAC | 1 cut(s) | 412 |
| ApeKI | GCWGC | 8 cut(s) | 176, 179, 182, 211, 446, 977, 1786, 1888 |
| ApoI | RAATTY | 1 cut(s) | 1702 |
| AsiGI | ACCGGT | 2 cut(s) | 1568, 1862 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1082 |
| AspLEI | GCGC | 2 cut(s) | 72, 1627 |
| AspS9I | GGNCC | 4 cut(s) | 332, 627, 1110, 1252 |
| AsuC2I | CCSGG | 1 cut(s) | 904 |
| AsuHPI | GGTGA | 5 cut(s) | 596, 919, 1552, 1807, 1923 |
| AvaI | CYCGRG | 2 cut(s) | 482, 1957 |
| AvaII | GGWCC | 1 cut(s) | 332 |
| BaeGI | GKGCMC | 2 cut(s) | 416, 2010 |
| BanI | GGYRCC | 2 cut(s) | 69, 2005 |
| BanII | GRGCYC | 2 cut(s) | 42, 1059 |
| BauI | CACGAG | 1 cut(s) | 377 |
| BbsI | GAAGAC | 3 cut(s) | 9, 102, 1576 |
| Bbv12I | GWGCWC | 3 cut(s) | 416, 1815, 1977 |
| BbvCI | CCTCAGC | 1 cut(s) | 1536 |
| BbvI | GCAGC | 8 cut(s) | 169, 188, 191, 223, 433, 964, 1798, 1900 |
| BccI | CCATC | 4 cut(s) | 617, 725, 1216, 1957 |
| BceAI | ACGGC | 1 cut(s) | 1266 |
| BciT130I | CCWGG | 3 cut(s) | 245, 1075, 1131 |
| BclI | TGATCA | 1 cut(s) | 730 |
| BcnI | CCSGG | 1 cut(s) | 904 |
| BcoDI | GTCTC | 1 cut(s) | 2023 |
| BfaI | CTAG | 3 cut(s) | 1457, 1497, 1826 |
| BfmI | CTRYAG | 2 cut(s) | 604, 1842 |
| BfoI | RGCGCY | 1 cut(s) | 73 |
| BfrI | CTTAAG | 1 cut(s) | 701 |
| BfuAI | ACCTGC | 2 cut(s) | 1032, 1423 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1097 |
| BisI | GCNGC | 8 cut(s) | 177, 180, 183, 212, 447, 978, 1787, 1889 |
| BlpI | GCTNAGC | 2 cut(s) | 1032, 1531 |
| BlsI | GCNGC | 8 cut(s) | 178, 181, 184, 213, 448, 979, 1788, 1890 |
| Bme1390I | CCNGG | 4 cut(s) | 245, 904, 1075, 1131 |
| Bme18I | GGWCC | 1 cut(s) | 332 |
| BmeT110I | CYCGRG | 2 cut(s) | 482, 1957 |
| BmgBI | CACGTC | 1 cut(s) | 1983 |
| BmgT120I | GGNCC | 4 cut(s) | 332, 627, 1110, 1252 |
| BmiI | GGNNCC | 8 cut(s) | 39, 71, 628, 1072, 1111, 1254, 1839, 2007 |
| BmrFI | CCNGG | 4 cut(s) | 245, 904, 1075, 1131 |
| BmrI | ACTGGG | 1 cut(s) | 348 |
| BmsI | GCATC | 4 cut(s) | 163, 547, 1378, 1603 |
| BmuI | ACTGGG | 1 cut(s) | 348 |
| BpiI | GAAGAC | 3 cut(s) | 9, 102, 1576 |
| BpmI | CTGGAG | 2 cut(s) | 227, 2111 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1536 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1032, 1531 |
| BpuEI | CTTGAG | 2 cut(s) | 1050, 1802 |
| BpuMI | CCSGG | 1 cut(s) | 904 |
| BsaAI | YACGTR | 1 cut(s) | 749 |
| BsaBI | GATNNNNATC | 1 cut(s) | 710 |
| BsaHI | GRCGYC | 1 cut(s) | 70 |
| BsaJI | CCNNGG | 4 cut(s) | 903, 1129, 1130, 1479 |
| BsaWI | WCCGGW | 3 cut(s) | 1568, 1862, 2015 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1959, 1989 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 79, 905, 1166, 1958, 1959, 1984, 2015 |
| Bse118I | RCCGGY | 3 cut(s) | 1568, 1862, 2085 |
| Bse1I | ACTGG | 3 cut(s) | 343, 1171, 2106 |
| Bse3DI | GCAATG | 3 cut(s) | 567, 1662, 1667 |
| Bse8I | GATNNNNATC | 1 cut(s) | 710 |
| BseBI | CCWGG | 3 cut(s) | 245, 1075, 1131 |
| BseDI | CCNNGG | 4 cut(s) | 903, 1129, 1130, 1479 |
| BseGI | GGATG | 8 cut(s) | 628, 717, 804, 862, 1227, 1948, 1968, 2110 |
| BseJI | GATNNNNATC | 1 cut(s) | 710 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 79, 905, 1166, 1958, 1959, 1984, 2015 |
| BseMI | GCAATG | 3 cut(s) | 567, 1662, 1667 |
| BseMII | CTCAG | 4 cut(s) | 504, 1023, 1527, 1545 |
| BseNI | ACTGG | 3 cut(s) | 343, 1171, 2106 |
| BseRI | GAGGAG | 1 cut(s) | 1768 |
| BseSI | GKGCMC | 2 cut(s) | 416, 2010 |
| BseXI | GCAGC | 8 cut(s) | 169, 188, 191, 223, 433, 964, 1798, 1900 |
| BseYI | CCCAGC | 1 cut(s) | 41 |
| BsgI | GTGCAG | 2 cut(s) | 230, 858 |
| BshFI | GGCC | 4 cut(s) | 383, 629, 1112, 1253 |
| BshNI | GGYRCC | 2 cut(s) | 69, 2005 |
| BshTI | ACCGGT | 2 cut(s) | 1568, 1862 |
| BsiHKAI | GWGCWC | 3 cut(s) | 416, 1815, 1977 |
| BsiHKCI | CYCGRG | 2 cut(s) | 482, 1957 |
| BsiSI | CCGG | 8 cut(s) | 73, 384, 903, 1569, 1863, 2016, 2051, 2086 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 79, 905, 1166, 1958, 1959, 1984, 2015 |
| BsmAI | GTCTC | 1 cut(s) | 2023 |
| BsnI | GGCC | 4 cut(s) | 383, 629, 1112, 1253 |
| BsoBI | CYCGRG | 2 cut(s) | 482, 1957 |
| Bsp1286I | GDGCHC | 6 cut(s) | 42, 416, 1059, 1815, 1977, 2010 |
| Bsp143I | GATC | 9 cut(s) | 52, 130, 730, 942, 1282, 1483, 1657, 1901, 2043 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1032, 1531 |
| BspACI | CCGC | 4 cut(s) | 796, 1469, 1502, 2075 |
| BspANI | GGCC | 4 cut(s) | 383, 629, 1112, 1253 |
| BspCNI | CTCAG | 4 cut(s) | 505, 1024, 1528, 1544 |
| BspHI | TCATGA | 1 cut(s) | 1996 |
| BspLI | GGNNCC | 8 cut(s) | 39, 71, 628, 1072, 1111, 1254, 1839, 2007 |
| BspMI | ACCTGC | 2 cut(s) | 1032, 1423 |
| BspPI | GGATC | 4 cut(s) | 47, 1491, 1665, 1909 |
| BspQI | GCTCTTC | 2 cut(s) | 99, 987 |
| BspT107I | GGYRCC | 2 cut(s) | 69, 2005 |
| BspTI | CTTAAG | 1 cut(s) | 701 |
| BsrDI | GCAATG | 3 cut(s) | 567, 1662, 1667 |
| BsrFI | RCCGGY | 3 cut(s) | 1568, 1862, 2085 |
| BsrI | ACTGG | 3 cut(s) | 343, 1171, 2106 |
| BssAI | RCCGGY | 3 cut(s) | 1568, 1862, 2085 |
| BssECI | CCNNGG | 4 cut(s) | 903, 1129, 1130, 1479 |
| BssMI | GATC | 9 cut(s) | 52, 130, 730, 942, 1282, 1483, 1657, 1901, 2043 |
| BssNAI | GTATAC | 1 cut(s) | 1946 |
| BssNI | GRCGYC | 1 cut(s) | 70 |
| BssSI | CACGAG | 1 cut(s) | 377 |
| BssT1I | CCWWGG | 1 cut(s) | 1479 |
| Bst1107I | GTATAC | 1 cut(s) | 1946 |
| Bst2BI | CACGAG | 1 cut(s) | 377 |
| Bst2UI | CCWGG | 3 cut(s) | 245, 1075, 1131 |
| Bst4CI | ACNGT | 6 cut(s) | 538, 1096, 1318, 1392, 1716, 1915 |
| Bst6I | CTCTTC | 3 cut(s) | 99, 933, 987 |
| BstACI | GRCGYC | 1 cut(s) | 70 |
| BstAFI | CTTAAG | 1 cut(s) | 701 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 182 |
| BstBAI | YACGTR | 1 cut(s) | 749 |
| BstC8I | GCNNGC | 2 cut(s) | 982, 1029 |
| BstDEI | CTNAG | 6 cut(s) | 513, 1032, 1358, 1531, 1536, 1673 |
| BstF5I | GGATG | 8 cut(s) | 628, 717, 804, 862, 1227, 1948, 1968, 2110 |
| BstH2I | RGCGCY | 1 cut(s) | 73 |
| BstHHI | GCGC | 2 cut(s) | 72, 1627 |
| BstKTI | GATC | 9 cut(s) | 55, 133, 733, 945, 1285, 1486, 1660, 1904, 2046 |
| BstMAI | GTCTC | 1 cut(s) | 2023 |
| BstMBI | GATC | 9 cut(s) | 52, 130, 730, 942, 1282, 1483, 1657, 1901, 2043 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 182, 443, 986, 1033, 1097, 1508, 1622, 1786 |
| BstNI | CCWGG | 3 cut(s) | 245, 1075, 1131 |
| BstNSI | RCATGY | 1 cut(s) | 1610 |
| BstSCI | CCNGG | 4 cut(s) | 243, 902, 1073, 1129 |
| BstSFI | CTRYAG | 2 cut(s) | 604, 1842 |
| BstSLI | GKGCMC | 2 cut(s) | 416, 2010 |
| BstV1I | GCAGC | 8 cut(s) | 169, 188, 191, 223, 433, 964, 1798, 1900 |
| BstV2I | GAAGAC | 3 cut(s) | 9, 102, 1576 |
| BstX2I | RGATCY | 2 cut(s) | 52, 1901 |
| BstYI | RGATCY | 2 cut(s) | 52, 1901 |
| BstZ17I | GTATAC | 1 cut(s) | 1946 |
| BsuRI | GGCC | 4 cut(s) | 383, 629, 1112, 1253 |
| BtrI | CACGTC | 1 cut(s) | 1983 |
| BtsCI | GGATG | 8 cut(s) | 628, 717, 804, 862, 1227, 1948, 1968, 2110 |
| BtsI | GCAGTG | 1 cut(s) | 870 |
| BtsIMutI | CAGTG | 4 cut(s) | 870, 1101, 1323, 1721 |
| BveI | ACCTGC | 2 cut(s) | 1032, 1423 |
| Cac8I | GCNNGC | 2 cut(s) | 982, 1029 |
| CaiI | CAGNNNCTG | 1 cut(s) | 182 |
| CciI | TCATGA | 1 cut(s) | 1996 |
| CfoI | GCGC | 2 cut(s) | 72, 1627 |
| Cfr10I | RCCGGY | 3 cut(s) | 1568, 1862, 2085 |
| Cfr13I | GGNCC | 4 cut(s) | 332, 627, 1110, 1252 |
| Csp6I | GTAC | 4 cut(s) | 1013, 1328, 1522, 2099 |
| CspAI | ACCGGT | 2 cut(s) | 1568, 1862 |
| CviQI | GTAC | 4 cut(s) | 1013, 1328, 1522, 2099 |
| DdeI | CTNAG | 6 cut(s) | 513, 1032, 1358, 1531, 1536, 1673 |
| DinI | GGCGCC | 1 cut(s) | 71 |
| DpnI | GATC | 9 cut(s) | 54, 132, 732, 944, 1284, 1485, 1659, 1903, 2045 |
| DpnII | GATC | 9 cut(s) | 52, 130, 730, 942, 1282, 1483, 1657, 1901, 2043 |
| Eam1104I | CTCTTC | 3 cut(s) | 99, 933, 987 |
| EarI | CTCTTC | 3 cut(s) | 99, 933, 987 |
| EciI | GGCGGA | 2 cut(s) | 811, 1484 |
| Eco130I | CCWWGG | 1 cut(s) | 1479 |
| Eco24I | GRGCYC | 2 cut(s) | 42, 1059 |
| Eco32I | GATATC | 1 cut(s) | 655 |
| Eco47I | GGWCC | 1 cut(s) | 332 |
| Eco57I | CTGAAG | 2 cut(s) | 1011, 1440 |
| Eco88I | CYCGRG | 2 cut(s) | 482, 1957 |
| EcoRII | CCWGG | 3 cut(s) | 243, 1073, 1129 |
| EcoRV | GATATC | 1 cut(s) | 655 |
| EcoT14I | CCWWGG | 1 cut(s) | 1479 |
| EcoT22I | ATGCAT | 1 cut(s) | 1690 |
| EcoT38I | GRGCYC | 2 cut(s) | 42, 1059 |
| EgeI | GGCGCC | 1 cut(s) | 71 |
| EheI | GGCGCC | 1 cut(s) | 71 |
| ErhI | CCWWGG | 1 cut(s) | 1479 |
| FauNDI | CATATG | 1 cut(s) | 1488 |
| FbaI | TGATCA | 1 cut(s) | 730 |
| FblI | GTMKAC | 1 cut(s) | 1945 |
| Fnu4HI | GCNGC | 8 cut(s) | 177, 180, 183, 212, 447, 978, 1787, 1889 |
| FokI | GGATG | 7 cut(s) | 635, 704, 811, 869, 1234, 1935, 1975 |
| FriOI | GRGCYC | 2 cut(s) | 42, 1059 |
| Fsp4HI | GCNGC | 8 cut(s) | 177, 180, 183, 212, 447, 978, 1787, 1889 |
| FspBI | CTAG | 3 cut(s) | 1457, 1497, 1826 |
| FspI | TGCGCA | 1 cut(s) | 1626 |
| GlaI | GCGC | 2 cut(s) | 71, 1626 |
| GluI | GCNGC | 8 cut(s) | 177, 180, 183, 212, 447, 978, 1787, 1889 |
| GsaI | CCCAGC | 1 cut(s) | 45 |
| GsuI | CTGGAG | 2 cut(s) | 227, 2111 |
| HaeII | RGCGCY | 1 cut(s) | 73 |
| HaeIII | GGCC | 4 cut(s) | 383, 629, 1112, 1253 |
| HapII | CCGG | 8 cut(s) | 73, 384, 903, 1569, 1863, 2016, 2051, 2086 |
| HhaI | GCGC | 2 cut(s) | 72, 1627 |
| Hin1I | GRCGYC | 1 cut(s) | 70 |
| Hin6I | GCGC | 2 cut(s) | 70, 1625 |
| HinP1I | GCGC | 2 cut(s) | 70, 1625 |
| HindIII | AAGCTT | 1 cut(s) | 1778 |
| HinfI | GANTC | 4 cut(s) | 88, 310, 1577, 1928 |
| HpaII | CCGG | 8 cut(s) | 73, 384, 903, 1569, 1863, 2016, 2051, 2086 |
| HphI | GGTGA | 5 cut(s) | 596, 919, 1552, 1807, 1923 |
| Hpy166II | GTNNAC | 4 cut(s) | 414, 587, 1681, 1946 |
| Hpy188I | TCNGA | 6 cut(s) | 37, 52, 226, 514, 529, 722 |
| Hpy188III | TCNNGA | 8 cut(s) | 56, 92, 281, 453, 1724, 1772, 1978, 1997 |
| Hpy8I | GTNNAC | 4 cut(s) | 414, 587, 1681, 1946 |
| Hpy99I | CGWCG | 1 cut(s) | 1984 |
| HpyAV | CCTTC | 4 cut(s) | 519, 1072, 1792, 1843 |
| HpyCH4III | ACNGT | 6 cut(s) | 538, 1096, 1318, 1392, 1716, 1915 |
| HpyCH4IV | ACGT | 2 cut(s) | 748, 1982 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 182, 443, 986, 1033, 1097, 1508, 1622, 1786 |
| HpyF3I | CTNAG | 6 cut(s) | 513, 1032, 1358, 1531, 1536, 1673 |
| HpySE526I | ACGT | 2 cut(s) | 748, 1982 |
| Hsp92I | GRCGYC | 1 cut(s) | 70 |
| HspAI | GCGC | 2 cut(s) | 70, 1625 |
| KasI | GGCGCC | 1 cut(s) | 69 |
| Ksp22I | TGATCA | 1 cut(s) | 730 |
| Kzo9I | GATC | 9 cut(s) | 52, 130, 730, 942, 1282, 1483, 1657, 1901, 2043 |
| LguI | GCTCTTC | 2 cut(s) | 99, 987 |
| LmnI | GCTCC | 8 cut(s) | 37, 226, 246, 772, 1070, 1837, 1980, 2077 |
| Lsp1109I | GCAGC | 8 cut(s) | 169, 188, 191, 223, 433, 964, 1798, 1900 |
| LweI | GCATC | 4 cut(s) | 163, 547, 1378, 1603 |
| MaeI | CTAG | 3 cut(s) | 1457, 1497, 1826 |
| MaeII | ACGT | 2 cut(s) | 748, 1982 |
| MaeIII | GTNAC | 4 cut(s) | 744, 809, 1721, 2035 |
| MalI | GATC | 9 cut(s) | 54, 132, 732, 944, 1284, 1485, 1659, 1903, 2045 |
| MboI | GATC | 9 cut(s) | 52, 130, 730, 942, 1282, 1483, 1657, 1901, 2043 |
| MfeI | CAATTG | 2 cut(s) | 1515, 1628 |
| MflI | RGATCY | 2 cut(s) | 52, 1901 |
| MhlI | GDGCHC | 6 cut(s) | 42, 416, 1059, 1815, 1977, 2010 |
| Mly113I | GGCGCC | 1 cut(s) | 70 |
| MlyI | GAGTC | 1 cut(s) | 97 |
| MmeI | TCCRAC | 1 cut(s) | 359 |
| Mph1103I | ATGCAT | 1 cut(s) | 1690 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1082 |
| MseI | TTAA | 6 cut(s) | 138, 671, 702, 1178, 1380, 2113 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1611, 1717 |
| MspA1I | CMGCKG | 2 cut(s) | 182, 1535 |
| MspCI | CTTAAG | 1 cut(s) | 701 |
| MspI | CCGG | 8 cut(s) | 73, 384, 903, 1569, 1863, 2016, 2051, 2086 |
| MspR9I | CCNGG | 4 cut(s) | 245, 904, 1075, 1131 |
| MunI | CAATTG | 2 cut(s) | 1515, 1628 |
| MvaI | CCWGG | 3 cut(s) | 245, 1075, 1131 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 182, 443, 986, 1033, 1097, 1508, 1622, 1786 |
| NarI | GGCGCC | 1 cut(s) | 70 |
| NciI | CCSGG | 1 cut(s) | 904 |
| NdeI | CATATG | 1 cut(s) | 1488 |
| NdeII | GATC | 9 cut(s) | 52, 130, 730, 942, 1282, 1483, 1657, 1901, 2043 |
| NlaIV | GGNNCC | 8 cut(s) | 39, 71, 628, 1072, 1111, 1254, 1839, 2007 |
| NmuCI | GTSAC | 2 cut(s) | 809, 1721 |
| NsbI | TGCGCA | 1 cut(s) | 1626 |
| NsiI | ATGCAT | 1 cut(s) | 1690 |
| NspI | RCATGY | 1 cut(s) | 1610 |
| OliI | CACNNNNGTG | 1 cut(s) | 1717 |
| PagI | TCATGA | 1 cut(s) | 1996 |
| PaqCI | CACCTGC | 1 cut(s) | 1423 |
| PasI | CCCWGGG | 1 cut(s) | 1130 |
| PciSI | GCTCTTC | 2 cut(s) | 99, 987 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1082 |
| PfeI | GAWTC | 3 cut(s) | 310, 1577, 1928 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1166 |
| PfoI | TCCNGGA | 1 cut(s) | 243 |
| PinAI | ACCGGT | 2 cut(s) | 1568, 1862 |
| PkrI | GCNGC | 8 cut(s) | 178, 181, 184, 213, 448, 979, 1788, 1890 |
| PleI | GAGTC | 1 cut(s) | 96 |
| PluTI | GGCGCC | 1 cut(s) | 73 |
| PpsI | GAGTC | 1 cut(s) | 96 |
| Ppu21I | YACGTR | 1 cut(s) | 749 |
| PsiI | TTATAA | 1 cut(s) | 1155 |
| Psp6I | CCWGG | 3 cut(s) | 243, 1073, 1129 |
| PspFI | CCCAGC | 1 cut(s) | 41 |
| PspGI | CCWGG | 3 cut(s) | 243, 1073, 1129 |
| PspN4I | GGNNCC | 8 cut(s) | 39, 71, 628, 1072, 1111, 1254, 1839, 2007 |
| PspPI | GGNCC | 4 cut(s) | 332, 627, 1110, 1252 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 136, 168, 1338, 1370 |
| PstNI | CAGNNNCTG | 1 cut(s) | 182 |
| PsuI | RGATCY | 2 cut(s) | 52, 1901 |
| PvuII | CAGCTG | 2 cut(s) | 182, 1535 |
| RsaI | GTAC | 4 cut(s) | 1014, 1329, 1523, 2100 |
| RsaNI | GTAC | 4 cut(s) | 1013, 1328, 1522, 2099 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1611, 1717 |
| SapI | GCTCTTC | 2 cut(s) | 99, 987 |
| SaqAI | TTAA | 6 cut(s) | 138, 671, 702, 1178, 1380, 2113 |
| SatI | GCNGC | 8 cut(s) | 177, 180, 183, 212, 447, 978, 1787, 1889 |
| Sau3AI | GATC | 9 cut(s) | 52, 130, 730, 942, 1282, 1483, 1657, 1901, 2043 |
| Sau96I | GGNCC | 4 cut(s) | 332, 627, 1110, 1252 |
| SchI | GAGTC | 1 cut(s) | 97 |
| ScrFI | CCNGG | 4 cut(s) | 245, 904, 1075, 1131 |
| SduI | GDGCHC | 6 cut(s) | 42, 416, 1059, 1815, 1977, 2010 |
| SfaNI | GCATC | 4 cut(s) | 163, 547, 1378, 1603 |
| SfcI | CTRYAG | 2 cut(s) | 604, 1842 |
| SfoI | GGCGCC | 1 cut(s) | 71 |
| SinI | GGWCC | 1 cut(s) | 332 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1611, 1717 |
| SmlI | CTYRAG | 3 cut(s) | 701, 1065, 1781 |
| SmoI | CTYRAG | 3 cut(s) | 701, 1065, 1781 |
| SsiI | CCGC | 4 cut(s) | 796, 1469, 1502, 2075 |
| SspDI | GGCGCC | 1 cut(s) | 69 |
| SspMI | CTAG | 3 cut(s) | 1457, 1497, 1826 |
| StyD4I | CCNGG | 4 cut(s) | 243, 902, 1073, 1129 |
| StyI | CCWWGG | 1 cut(s) | 1479 |
| TaaI | ACNGT | 6 cut(s) | 538, 1096, 1318, 1392, 1716, 1915 |
| TaiI | ACGT | 2 cut(s) | 751, 1985 |
| TaqI | TCGA | 4 cut(s) | 294, 685, 945, 1591 |
| TatI | WGTACW | 3 cut(s) | 1327, 1521, 2098 |
| TfiI | GAWTC | 3 cut(s) | 310, 1577, 1928 |
| Tru1I | TTAA | 6 cut(s) | 138, 671, 702, 1178, 1380, 2113 |
| Tru9I | TTAA | 6 cut(s) | 138, 671, 702, 1178, 1380, 2113 |
| TscAI | CASTG | 4 cut(s) | 877, 1101, 1323, 1721 |
| TseFI | GTSAC | 2 cut(s) | 809, 1721 |
| TseI | GCWGC | 8 cut(s) | 176, 179, 182, 211, 446, 977, 1786, 1888 |
| Tsp45I | GTSAC | 2 cut(s) | 809, 1721 |
| TspDTI | ATGAA | 8 cut(s) | 117, 216, 588, 845, 951, 1032, 1628, 1910 |
| TspGWI | ACGGA | 1 cut(s) | 1931 |
| TspRI | CASTG | 4 cut(s) | 877, 1101, 1323, 1721 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1166 |
| Vha464I | CTTAAG | 1 cut(s) | 701 |
| VneI | GTGCAC | 1 cut(s) | 412 |
| VpaK11BI | GGWCC | 1 cut(s) | 332 |
| XapI | RAATTY | 1 cut(s) | 1702 |
| XceI | RCATGY | 1 cut(s) | 1610 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1329, 1960 |
| XmiI | GTMKAC | 1 cut(s) | 1945 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1082 |
| XspI | CTAG | 3 cut(s) | 1457, 1497, 1826 |
| Zsp2I | ATGCAT | 1 cut(s) | 1690 |