Pre-mRNA-splicing factor ATP-dependent RNA helicase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2245 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2465 |
| Acc36I | ACCTGC | 2 cut(s) | 808, 2245 |
| AccBSI | CCGCTC | 1 cut(s) | 2644 |
| AccI | GTMKAC | 2 cut(s) | 696, 2320 |
| AccII | CGCG | 2 cut(s) | 1243, 1248 |
| AciI | CCGC | 5 cut(s) | 1241, 1243, 2051, 2644, 2927 |
| AclWI | GGATC | 6 cut(s) | 1946, 2204, 2222, 2235, 2339, 2352 |
| AcoI | YGGCCR | 2 cut(s) | 120, 1147 |
| AcsI | RAATTY | 3 cut(s) | 397, 1559, 2491 |
| AcuI | CTGAAG | 5 cut(s) | 41, 369, 1896, 2262, 2358 |
| AcvI | CACGTG | 1 cut(s) | 1693 |
| AcyI | GRCGYC | 3 cut(s) | 176, 764, 2033 |
| AfaI | GTAC | 5 cut(s) | 1088, 1205, 1367, 1678, 2403 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1161, 1994, 2810, 2811, 2944 |
| AgeI | ACCGGT | 1 cut(s) | 1154 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1782 |
| AjiI | CACGTC | 1 cut(s) | 27 |
| AjnI | CCWGG | 6 cut(s) | 1059, 1271, 1600, 1705, 1957, 2074 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 530, 562 |
| AleI | CACNNNNGTG | 1 cut(s) | 2575 |
| Alw21I | GWGCWC | 4 cut(s) | 808, 1235, 2393, 2673 |
| Alw26I | GTCTC | 2 cut(s) | 37, 2549 |
| Alw44I | GTGCAC | 2 cut(s) | 804, 1231 |
| AlwI | GGATC | 6 cut(s) | 1946, 2204, 2222, 2235, 2339, 2352 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1189, 1649 |
| Ama87I | CYCGRG | 1 cut(s) | 2979 |
| AoxI | GGCC | 4 cut(s) | 120, 1147, 1851, 2071 |
| ApaLI | GTGCAC | 2 cut(s) | 804, 1231 |
| ApeKI | GCWGC | 8 cut(s) | 419, 769, 1253, 1268, 1664, 1846, 2209, 2414 |
| ApoI | RAATTY | 3 cut(s) | 397, 1559, 2491 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2548, 2580 |
| AsiGI | ACCGGT | 1 cut(s) | 1154 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 505, 587 |
| AspA2I | CCTAGG | 1 cut(s) | 248 |
| AspLEI | GCGC | 3 cut(s) | 1098, 1248, 2998 |
| AspS9I | GGNCC | 3 cut(s) | 156, 2072, 2857 |
| AsuC2I | CCSGG | 1 cut(s) | 1504 |
| AsuHPI | GGTGA | 8 cut(s) | 55, 340, 827, 902, 1501, 2312, 2665, 2854 |
| AvaI | CYCGRG | 1 cut(s) | 2979 |
| AvaII | GGWCC | 2 cut(s) | 156, 2857 |
| AvrII | CCTAGG | 1 cut(s) | 248 |
| BaeGI | GKGCMC | 3 cut(s) | 808, 1235, 2287 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1169, 1202 |
| BalI | TGGCCA | 1 cut(s) | 1149 |
| BamHI | GGATCC | 2 cut(s) | 2227, 2344 |
| BanII | GRGCYC | 1 cut(s) | 2673 |
| BauI | CACGAG | 1 cut(s) | 1451 |
| BbrPI | CACGTG | 1 cut(s) | 1693 |
| BbsI | GAAGAC | 3 cut(s) | 29, 1358, 1618 |
| Bbv12I | GWGCWC | 4 cut(s) | 808, 1235, 2393, 2673 |
| BbvI | GCAGC | 8 cut(s) | 431, 781, 1255, 1265, 1676, 1833, 2196, 2401 |
| BceAI | ACGGC | 1 cut(s) | 189 |
| BciT130I | CCWGG | 6 cut(s) | 1061, 1273, 1602, 1707, 1959, 2076 |
| BclI | TGATCA | 2 cut(s) | 478, 2632 |
| BcnI | CCSGG | 1 cut(s) | 1504 |
| BcoDI | GTCTC | 2 cut(s) | 37, 2549 |
| BfaI | CTAG | 8 cut(s) | 140, 249, 1536, 1787, 1839, 1884, 2279, 2742 |
| BfmI | CTRYAG | 4 cut(s) | 1423, 1847, 2086, 2685 |
| BfuAI | ACCTGC | 2 cut(s) | 808, 2245 |
| BlnI | CCTAGG | 1 cut(s) | 248 |
| BlpI | GCTNAGC | 1 cut(s) | 1803 |
| Bme1390I | CCNGG | 7 cut(s) | 1061, 1273, 1504, 1602, 1707, 1959, 2076 |
| Bme18I | GGWCC | 2 cut(s) | 156, 2857 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1782 |
| BmeT110I | CYCGRG | 1 cut(s) | 2979 |
| BmgBI | CACGTC | 1 cut(s) | 27 |
| BmgT120I | GGNCC | 3 cut(s) | 156, 2072, 2857 |
| BmiI | GGNNCC | 2 cut(s) | 2229, 2346 |
| BmrFI | CCNGG | 7 cut(s) | 1061, 1273, 1504, 1602, 1707, 1959, 2076 |
| BmrI | ACTGGG | 1 cut(s) | 2799 |
| BmsI | GCATC | 5 cut(s) | 126, 227, 1540, 1651, 2964 |
| BmuI | ACTGGG | 1 cut(s) | 2799 |
| BoxI | GACNNNNGTC | 1 cut(s) | 29 |
| BpiI | GAAGAC | 3 cut(s) | 29, 1358, 1618 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2660, 2692 |
| BpmI | CTGGAG | 3 cut(s) | 410, 1043, 1728 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1803 |
| BpuEI | CTTGAG | 3 cut(s) | 594, 1266, 2660 |
| BpuMI | CCSGG | 1 cut(s) | 1504 |
| Bsa29I | ATCGAT | 1 cut(s) | 1932 |
| BsaAI | YACGTR | 1 cut(s) | 1693 |
| BsaHI | GRCGYC | 3 cut(s) | 176, 764, 2033 |
| BsaI | GGTCTC | 1 cut(s) | 37 |
| BsaWI | WCCGGW | 2 cut(s) | 699, 1154 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 874, 904 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1161, 1994, 2810, 2811, 2944 |
| Bse118I | RCCGGY | 3 cut(s) | 118, 122, 1154 |
| Bse1I | ACTGG | 5 cut(s) | 393, 1735, 2074, 2434, 2805 |
| Bse3DI | GCAATG | 7 cut(s) | 658, 1263, 1497, 1908, 2006, 2512, 2525 |
| BseBI | CCWGG | 6 cut(s) | 1061, 1273, 1602, 1707, 1959, 2076 |
| BseCI | ATCGAT | 1 cut(s) | 1932 |
| BseGI | GGATG | 7 cut(s) | 685, 787, 1666, 2004, 2131, 2820, 2953 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1161, 1994, 2810, 2811, 2944 |
| BseMI | GCAATG | 7 cut(s) | 658, 1263, 1497, 1908, 2006, 2512, 2525 |
| BseMII | CTCAG | 6 cut(s) | 1338, 1545, 1794, 2091, 2322, 2406 |
| BseNI | ACTGG | 5 cut(s) | 393, 1735, 2074, 2434, 2805 |
| BseRI | GAGGAG | 4 cut(s) | 1079, 1084, 2005, 2411 |
| BseSI | GKGCMC | 3 cut(s) | 808, 1235, 2287 |
| BseX3I | CGGCCG | 1 cut(s) | 120 |
| BseXI | GCAGC | 8 cut(s) | 431, 781, 1255, 1265, 1676, 1833, 2196, 2401 |
| BsgI | GTGCAG | 1 cut(s) | 2195 |
| Bsh1236I | CGCG | 2 cut(s) | 1243, 1248 |
| Bsh1285I | CGRYCG | 2 cut(s) | 123, 2367 |
| BshFI | GGCC | 4 cut(s) | 122, 1149, 1853, 2073 |
| BshTI | ACCGGT | 1 cut(s) | 1154 |
| BshVI | ATCGAT | 1 cut(s) | 1932 |
| BsiEI | CGRYCG | 2 cut(s) | 123, 2367 |
| BsiHKAI | GWGCWC | 4 cut(s) | 808, 1235, 2393, 2673 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2979 |
| BsiSI | CCGG | 5 cut(s) | 119, 123, 700, 1155, 1504 |
| BslFI | GGGAC | 3 cut(s) | 1583, 1803, 1804 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1161, 1994, 2810, 2811, 2944 |
| BsmAI | GTCTC | 2 cut(s) | 37, 2549 |
| BsmFI | GGGAC | 3 cut(s) | 1583, 1803, 1804 |
| BsmI | GAATGC | 1 cut(s) | 478 |
| BsnI | GGCC | 4 cut(s) | 122, 1149, 1853, 2073 |
| Bso31I | GGTCTC | 1 cut(s) | 37 |
| BsoBI | CYCGRG | 1 cut(s) | 2979 |
| Bsp1286I | GDGCHC | 5 cut(s) | 808, 1235, 2287, 2393, 2673 |
| Bsp1407I | TGTACA | 1 cut(s) | 1086 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1803 |
| Bsp19I | CCATGG | 1 cut(s) | 1047 |
| BspACI | CCGC | 5 cut(s) | 1241, 1243, 2051, 2644, 2927 |
| BspANI | GGCC | 4 cut(s) | 122, 1149, 1853, 2073 |
| BspCNI | CTCAG | 6 cut(s) | 1339, 1546, 1795, 2092, 2323, 2405 |
| BspDI | ATCGAT | 1 cut(s) | 1932 |
| BspFNI | CGCG | 2 cut(s) | 1243, 1248 |
| BspHI | TCATGA | 3 cut(s) | 481, 1612, 2848 |
| BspLI | GGNNCC | 2 cut(s) | 2229, 2346 |
| BspMAI | CTGCAG | 1 cut(s) | 1851 |
| BspMI | ACCTGC | 2 cut(s) | 808, 2245 |
| BspPI | GGATC | 6 cut(s) | 1946, 2204, 2222, 2235, 2339, 2352 |
| BspQI | GCTCTTC | 1 cut(s) | 2180 |
| BspTNI | GGTCTC | 1 cut(s) | 37 |
| BsrBI | CCGCTC | 1 cut(s) | 2644 |
| BsrDI | GCAATG | 7 cut(s) | 658, 1263, 1497, 1908, 2006, 2512, 2525 |
| BsrFI | RCCGGY | 3 cut(s) | 118, 122, 1154 |
| BsrGI | TGTACA | 1 cut(s) | 1086 |
| BsrI | ACTGG | 5 cut(s) | 393, 1735, 2074, 2434, 2805 |
| BssAI | RCCGGY | 3 cut(s) | 118, 122, 1154 |
| BssNI | GRCGYC | 3 cut(s) | 176, 764, 2033 |
| BssSI | CACGAG | 1 cut(s) | 1451 |
| BssT1I | CCWWGG | 3 cut(s) | 248, 1047, 2191 |
| Bst2BI | CACGAG | 1 cut(s) | 1451 |
| Bst2UI | CCWGG | 6 cut(s) | 1061, 1273, 1602, 1707, 1959, 2076 |
| Bst4CI | ACNGT | 5 cut(s) | 1185, 1357, 2268, 2773, 2791 |
| Bst6I | CTCTTC | 4 cut(s) | 312, 354, 743, 2180 |
| BstACI | GRCGYC | 3 cut(s) | 176, 764, 2033 |
| BstAUI | TGTACA | 1 cut(s) | 1086 |
| BstBAI | YACGTR | 1 cut(s) | 1693 |
| BstC8I | GCNNGC | 6 cut(s) | 120, 124, 497, 1420, 1851, 2994 |
| BstDEI | CTNAG | 8 cut(s) | 1347, 1554, 1803, 2100, 2260, 2331, 2392, 2868 |
| BstDSI | CCRYGG | 2 cut(s) | 1047, 1241 |
| BstF5I | GGATG | 7 cut(s) | 685, 787, 1666, 2004, 2131, 2820, 2953 |
| BstFNI | CGCG | 2 cut(s) | 1243, 1248 |
| BstHHI | GCGC | 3 cut(s) | 1098, 1248, 2998 |
| BstMAI | GTCTC | 2 cut(s) | 37, 2549 |
| BstMCI | CGRYCG | 2 cut(s) | 123, 2367 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 182, 1043, 1646, 1843, 2282, 2369, 2480, 2644 |
| BstNI | CCWGG | 6 cut(s) | 1061, 1273, 1602, 1707, 1959, 2076 |
| BstNSI | RCATGY | 2 cut(s) | 812, 1384 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 29 |
| BstSCI | CCNGG | 7 cut(s) | 1059, 1271, 1502, 1600, 1705, 1957, 2074 |
| BstSFI | CTRYAG | 4 cut(s) | 1423, 1847, 2086, 2685 |
| BstSLI | GKGCMC | 3 cut(s) | 808, 1235, 2287 |
| BstUI | CGCG | 2 cut(s) | 1243, 1248 |
| BstV1I | GCAGC | 8 cut(s) | 431, 781, 1255, 1265, 1676, 1833, 2196, 2401 |
| BstV2I | GAAGAC | 3 cut(s) | 29, 1358, 1618 |
| BstX2I | RGATCY | 2 cut(s) | 2227, 2344 |
| BstYI | RGATCY | 2 cut(s) | 2227, 2344 |
| BstZI | CGGCCG | 1 cut(s) | 120 |
| Bsu15I | ATCGAT | 1 cut(s) | 1932 |
| BsuRI | GGCC | 4 cut(s) | 122, 1149, 1853, 2073 |
| BsuTUI | ATCGAT | 1 cut(s) | 1932 |
| BtgI | CCRYGG | 2 cut(s) | 1047, 1241 |
| BtgZI | GCGATG | 2 cut(s) | 76, 300 |
| BtrI | CACGTC | 1 cut(s) | 27 |
| BtsCI | GGATG | 7 cut(s) | 685, 787, 1666, 2004, 2131, 2820, 2953 |
| BtsIMutI | CAGTG | 4 cut(s) | 1570, 2246, 2427, 2778 |
| BveI | ACCTGC | 2 cut(s) | 808, 2245 |
| Cac8I | GCNNGC | 6 cut(s) | 120, 124, 497, 1420, 1851, 2994 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1189, 1649 |
| CciI | TCATGA | 3 cut(s) | 481, 1612, 2848 |
| CfoI | GCGC | 3 cut(s) | 1098, 1248, 2998 |
| Cfr10I | RCCGGY | 3 cut(s) | 118, 122, 1154 |
| Cfr13I | GGNCC | 3 cut(s) | 156, 2072, 2857 |
| Cfr42I | CCGCGG | 1 cut(s) | 1244 |
| ClaI | ATCGAT | 1 cut(s) | 1932 |
| CseI | GACGC | 3 cut(s) | 165, 753, 2022 |
| Csp6I | GTAC | 5 cut(s) | 1087, 1204, 1366, 1677, 2402 |
| CspAI | ACCGGT | 1 cut(s) | 1154 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1891, 1926 |
| CviQI | GTAC | 5 cut(s) | 1087, 1204, 1366, 1677, 2402 |
| DdeI | CTNAG | 8 cut(s) | 1347, 1554, 1803, 2100, 2260, 2331, 2392, 2868 |
| DraI | TTTAAA | 2 cut(s) | 402, 2113 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2465 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1782 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2465 |
| EaeI | YGGCCR | 2 cut(s) | 120, 1147 |
| EagI | CGGCCG | 1 cut(s) | 120 |
| Eam1104I | CTCTTC | 4 cut(s) | 312, 354, 743, 2180 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1782 |
| EarI | CTCTTC | 4 cut(s) | 312, 354, 743, 2180 |
| Ecl136II | GAGCTC | 1 cut(s) | 2671 |
| EclXI | CGGCCG | 1 cut(s) | 120 |
| Eco130I | CCWWGG | 3 cut(s) | 248, 1047, 2191 |
| Eco24I | GRGCYC | 1 cut(s) | 2673 |
| Eco31I | GGTCTC | 1 cut(s) | 37 |
| Eco32I | GATATC | 1 cut(s) | 2626 |
| Eco47I | GGWCC | 2 cut(s) | 156, 2857 |
| Eco52I | CGGCCG | 1 cut(s) | 120 |
| Eco53kI | GAGCTC | 1 cut(s) | 2671 |
| Eco57I | CTGAAG | 5 cut(s) | 41, 369, 1896, 2262, 2358 |
| Eco72I | CACGTG | 1 cut(s) | 1693 |
| Eco88I | CYCGRG | 1 cut(s) | 2979 |
| EcoICRI | GAGCTC | 1 cut(s) | 2671 |
| EcoRII | CCWGG | 6 cut(s) | 1059, 1271, 1600, 1705, 1957, 2074 |
| EcoRV | GATATC | 1 cut(s) | 2626 |
| EcoT14I | CCWWGG | 3 cut(s) | 248, 1047, 2191 |
| EcoT38I | GRGCYC | 1 cut(s) | 2673 |
| ErhI | CCWWGG | 3 cut(s) | 248, 1047, 2191 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 325, 357, 1881, 1913 |
| FaqI | GGGAC | 3 cut(s) | 1583, 1803, 1804 |
| FauI | CCCGC | 1 cut(s) | 2044 |
| FauNDI | CATATG | 1 cut(s) | 647 |
| FbaI | TGATCA | 2 cut(s) | 478, 2632 |
| FblI | GTMKAC | 2 cut(s) | 696, 2320 |
| FokI | GGATG | 7 cut(s) | 692, 794, 1673, 2011, 2138, 2827, 2960 |
| FriOI | GRGCYC | 1 cut(s) | 2673 |
| FspBI | CTAG | 8 cut(s) | 140, 249, 1536, 1787, 1839, 1884, 2279, 2742 |
| GlaI | GCGC | 3 cut(s) | 1097, 1247, 2997 |
| GsuI | CTGGAG | 3 cut(s) | 410, 1043, 1728 |
| HaeIII | GGCC | 4 cut(s) | 122, 1149, 1853, 2073 |
| HapII | CCGG | 5 cut(s) | 119, 123, 700, 1155, 1504 |
| HgaI | GACGC | 3 cut(s) | 165, 753, 2022 |
| HhaI | GCGC | 3 cut(s) | 1098, 1248, 2998 |
| Hin1I | GRCGYC | 3 cut(s) | 176, 764, 2033 |
| Hin6I | GCGC | 3 cut(s) | 1096, 1246, 2996 |
| HinP1I | GCGC | 3 cut(s) | 1096, 1246, 2996 |
| HindIII | AAGCTT | 2 cut(s) | 1298, 1607 |
| HinfI | GANTC | 6 cut(s) | 146, 703, 832, 1577, 2003, 2957 |
| HpaII | CCGG | 5 cut(s) | 119, 123, 700, 1155, 1504 |
| HphI | GGTGA | 8 cut(s) | 55, 340, 827, 902, 1501, 2312, 2665, 2854 |
| Hpy166II | GTNNAC | 8 cut(s) | 697, 806, 1206, 1233, 1441, 1679, 2321, 2539 |
| Hpy8I | GTNNAC | 8 cut(s) | 697, 806, 1206, 1233, 1441, 1679, 2321, 2539 |
| Hpy99I | CGWCG | 4 cut(s) | 181, 264, 469, 769 |
| HpyAV | CCTTC | 9 cut(s) | 318, 509, 790, 881, 1486, 1871, 2449, 2701, 2981 |
| HpyCH4III | ACNGT | 5 cut(s) | 1185, 1357, 2268, 2773, 2791 |
| HpyCH4IV | ACGT | 3 cut(s) | 26, 1692, 2499 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 182, 1043, 1646, 1843, 2282, 2369, 2480, 2644 |
| HpyF3I | CTNAG | 8 cut(s) | 1347, 1554, 1803, 2100, 2260, 2331, 2392, 2868 |
| HpySE526I | ACGT | 3 cut(s) | 26, 1692, 2499 |
| Hsp92I | GRCGYC | 3 cut(s) | 176, 764, 2033 |
| HspAI | GCGC | 3 cut(s) | 1096, 1246, 2996 |
| KroI | GCCGGC | 2 cut(s) | 118, 122 |
| KroNI | GCCGGC | 2 cut(s) | 120, 124 |
| Ksp22I | TGATCA | 2 cut(s) | 478, 2632 |
| KspI | CCGCGG | 1 cut(s) | 1244 |
| LguI | GCTCTTC | 1 cut(s) | 2180 |
| LmnI | GCTCC | 6 cut(s) | 382, 1062, 1588, 2604, 2759, 2929 |
| Lsp1109I | GCAGC | 8 cut(s) | 431, 781, 1255, 1265, 1676, 1833, 2196, 2401 |
| LweI | GCATC | 5 cut(s) | 126, 227, 1540, 1651, 2964 |
| MaeI | CTAG | 8 cut(s) | 140, 249, 1536, 1787, 1839, 1884, 2279, 2742 |
| MaeII | ACGT | 3 cut(s) | 26, 1692, 2499 |
| MaeIII | GTNAC | 6 cut(s) | 97, 1316, 1693, 2014, 2579, 2723 |
| MbiI | CCGCTC | 1 cut(s) | 2644 |
| MfeI | CAATTG | 1 cut(s) | 1668 |
| MflI | RGATCY | 2 cut(s) | 2227, 2344 |
| MhlI | GDGCHC | 5 cut(s) | 808, 1235, 2287, 2393, 2673 |
| MlsI | TGGCCA | 1 cut(s) | 1149 |
| MluNI | TGGCCA | 1 cut(s) | 1149 |
| MmeI | TCCRAC | 3 cut(s) | 60, 2103, 2727 |
| Mox20I | TGGCCA | 1 cut(s) | 1149 |
| MroNI | GCCGGC | 2 cut(s) | 118, 122 |
| MroXI | GAANNNNTTC | 2 cut(s) | 505, 587 |
| MscI | TGGCCA | 1 cut(s) | 1149 |
| MseI | TTAA | 4 cut(s) | 401, 738, 960, 2112 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2575 |
| Msp20I | TGGCCA | 1 cut(s) | 1149 |
| MspA1I | CMGCKG | 1 cut(s) | 1243 |
| MspI | CCGG | 5 cut(s) | 119, 123, 700, 1155, 1504 |
| MspR9I | CCNGG | 7 cut(s) | 1061, 1273, 1504, 1602, 1707, 1959, 2076 |
| MunI | CAATTG | 1 cut(s) | 1668 |
| Mva1269I | GAATGC | 1 cut(s) | 478 |
| MvaI | CCWGG | 6 cut(s) | 1061, 1273, 1602, 1707, 1959, 2076 |
| MvnI | CGCG | 2 cut(s) | 1243, 1248 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 182, 1043, 1646, 1843, 2282, 2369, 2480, 2644 |
| NaeI | GCCGGC | 2 cut(s) | 120, 124 |
| NciI | CCSGG | 1 cut(s) | 1504 |
| NcoI | CCATGG | 1 cut(s) | 1047 |
| NdeI | CATATG | 1 cut(s) | 647 |
| NgoMIV | GCCGGC | 2 cut(s) | 118, 122 |
| NlaIV | GGNNCC | 2 cut(s) | 2229, 2346 |
| NmuCI | GTSAC | 2 cut(s) | 1693, 2014 |
| NspI | RCATGY | 2 cut(s) | 812, 1384 |
| OliI | CACNNNNGTG | 1 cut(s) | 2575 |
| PagI | TCATGA | 3 cut(s) | 481, 1612, 2848 |
| PaqCI | CACCTGC | 1 cut(s) | 2245 |
| PciSI | GCTCTTC | 1 cut(s) | 2180 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1449 |
| PctI | GAATGC | 1 cut(s) | 478 |
| PdiI | GCCGGC | 2 cut(s) | 120, 124 |
| PdmI | GAANNNNTTC | 2 cut(s) | 505, 587 |
| PfeI | GAWTC | 6 cut(s) | 146, 703, 832, 1577, 2003, 2957 |
| PfoI | TCCNGGA | 1 cut(s) | 1059 |
| PinAI | ACCGGT | 1 cut(s) | 1154 |
| Ple19I | CGATCG | 1 cut(s) | 2367 |
| PmaCI | CACGTG | 1 cut(s) | 1693 |
| PmlI | CACGTG | 1 cut(s) | 1693 |
| Ppu21I | YACGTR | 1 cut(s) | 1693 |
| PshAI | GACNNNNGTC | 1 cut(s) | 29 |
| Psp124BI | GAGCTC | 1 cut(s) | 2673 |
| Psp6I | CCWGG | 6 cut(s) | 1059, 1271, 1600, 1705, 1957, 2074 |
| PspCI | CACGTG | 1 cut(s) | 1693 |
| PspGI | CCWGG | 6 cut(s) | 1059, 1271, 1600, 1705, 1957, 2074 |
| PspN4I | GGNNCC | 2 cut(s) | 2229, 2346 |
| PspPI | GGNCC | 3 cut(s) | 156, 2072, 2857 |
| PstI | CTGCAG | 1 cut(s) | 1851 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1189, 1649 |
| PsuI | RGATCY | 2 cut(s) | 2227, 2344 |
| PvuI | CGATCG | 1 cut(s) | 2367 |
| RsaI | GTAC | 5 cut(s) | 1088, 1205, 1367, 1678, 2403 |
| RsaNI | GTAC | 5 cut(s) | 1087, 1204, 1366, 1677, 2402 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2575 |
| SacI | GAGCTC | 1 cut(s) | 2673 |
| SacII | CCGCGG | 1 cut(s) | 1244 |
| SapI | GCTCTTC | 1 cut(s) | 2180 |
| SaqAI | TTAA | 4 cut(s) | 401, 738, 960, 2112 |
| Sau96I | GGNCC | 3 cut(s) | 156, 2072, 2857 |
| ScrFI | CCNGG | 7 cut(s) | 1061, 1273, 1504, 1602, 1707, 1959, 2076 |
| SduI | GDGCHC | 5 cut(s) | 808, 1235, 2287, 2393, 2673 |
| SfaNI | GCATC | 5 cut(s) | 126, 227, 1540, 1651, 2964 |
| SfcI | CTRYAG | 4 cut(s) | 1423, 1847, 2086, 2685 |
| Sfr303I | CCGCGG | 1 cut(s) | 1244 |
| SgrBI | CCGCGG | 1 cut(s) | 1244 |
| SinI | GGWCC | 2 cut(s) | 156, 2857 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2575 |
| SmlI | CTYRAG | 3 cut(s) | 609, 1281, 2639 |
| SmoI | CTYRAG | 3 cut(s) | 609, 1281, 2639 |
| SsiI | CCGC | 5 cut(s) | 1241, 1243, 2051, 2644, 2927 |
| SspI | AATATT | 2 cut(s) | 546, 1764 |
| SspMI | CTAG | 8 cut(s) | 140, 249, 1536, 1787, 1839, 1884, 2279, 2742 |
| SstI | GAGCTC | 1 cut(s) | 2673 |
| StyD4I | CCNGG | 7 cut(s) | 1059, 1271, 1502, 1600, 1705, 1957, 2074 |
| StyI | CCWWGG | 3 cut(s) | 248, 1047, 2191 |
| TaaI | ACNGT | 5 cut(s) | 1185, 1357, 2268, 2773, 2791 |
| TaiI | ACGT | 3 cut(s) | 29, 1695, 2502 |
| TatI | WGTACW | 3 cut(s) | 1086, 1365, 1676 |
| TauI | GCSGC | 3 cut(s) | 1243, 1246, 2647 |
| TfiI | GAWTC | 6 cut(s) | 146, 703, 832, 1577, 2003, 2957 |
| Tru1I | TTAA | 4 cut(s) | 401, 738, 960, 2112 |
| Tru9I | TTAA | 4 cut(s) | 401, 738, 960, 2112 |
| TscAI | CASTG | 4 cut(s) | 1570, 2253, 2434, 2778 |
| TseFI | GTSAC | 2 cut(s) | 1693, 2014 |
| TseI | GCWGC | 8 cut(s) | 419, 769, 1253, 1268, 1664, 1846, 2209, 2414 |
| Tsp45I | GTSAC | 2 cut(s) | 1693, 2014 |
| TspDTI | ATGAA | 8 cut(s) | 306, 539, 612, 684, 1601, 1769, 1988, 2624 |
| TspGWI | ACGGA | 2 cut(s) | 248, 2618 |
| TspRI | CASTG | 4 cut(s) | 1570, 2253, 2434, 2778 |
| VneI | GTGCAC | 2 cut(s) | 804, 1231 |
| VpaK11BI | GGWCC | 2 cut(s) | 156, 2857 |
| XapI | RAATTY | 3 cut(s) | 397, 1559, 2491 |
| XceI | RCATGY | 2 cut(s) | 812, 1384 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2812 |
| XmaJI | CCTAGG | 1 cut(s) | 248 |
| XmiI | GTMKAC | 2 cut(s) | 696, 2320 |
| XmnI | GAANNNNTTC | 2 cut(s) | 505, 587 |
| XspI | CTAG | 8 cut(s) | 140, 249, 1536, 1787, 1839, 1884, 2279, 2742 |