Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0000463

Physical Location & Seq

Genomic Coordinates Reverse (-)

14668107 .. 14675049

Gene Structure 6943 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G159800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3159 bp

ATGGGGAGCGAGAGCAATCTGAATACATGGGTATCCGATAAGTTGATGACGTTGCTCGGATATTCTCAGCCTACTGTTGTTCAGTACATTATTGGATTGACCAAACAGGCAAAATCACCGGCTGATGTTGTGGGCAAGCTTGTAGAATTAGAATTTGGGTTGTCATCTTCGGCCGAAACAAGTGCATTTGCTGAAGACATCTTCGCAAGAGTGCCCCGTAAAGAATCTGGTTTGAATCTATATCAGAAACAAGAGAGGGAAGCTGCCATGTTGGTGAAGAAGCAGAAGACATATTCTCTCTTGGATGCAGATGACGAAGATGACAATGATGGCGATACATCTTCTGCCCAGGTTATTTCCAAGTCCAGGAAAGCTGATTCCCATAAGAAACGATTCAGGAAGAAGGTCTTGAGTCAAGAAGATGAAGATGATGAGGTGATTGCACAAGAGGGACAAGTGAGACGAGTTAAAAGACGAACTTGTTCCCCAGATGACGATGATGGTTCAGAGTCAGAAGAGGAAAGATTGCGTGATCAAAGAGAGAGGGAGCAATTGGAGCAGAATATAAGGGAACGGGATACAGCAGCTACACGAAAGTTAACGGACAGAAAATTAACACGAAAGGAAGAAGAGGAGAATATTCGGAGAAGCAATGCATTGGAGCGGAATGACCTCGAAGATTTAAGAAAAGTTTCAAGACAAGAATATCTCAAAAAGAGGGAGCAAAAGAAATTGGAGGAAATCAGAGACGATATAGAGGATGAGCAATACTTATTTGATGGCGTGAAGCTCACTGAAGCAGAATATAGTGAACTAAGCTACAAGAAACAAATATACGAACTGGTGAAGAAGAGGTCAGATGAGGTTGAGGATATCACTGAGTACAGGATGCCAGATGCGTATGATGAGGAGGGTGGTGTTAATCAGGAAAAGAGATTTTCTGTGGCTGTGCAACGATACAGGGACCTCAGTGCTGGGGATAAAATGAACCCATTTGCAGAACAGGAAGCTTGGGAGGATCACCAAATTGGAAAAGCAACGCTGAAATTTGGTTCAAAAAACAAAAAACAAAAATCTGATGAGTATCAATTTGTATTTGAGGATCAGATTGATTTTATCAAGGCATCAGTGATGGATGGTGATGAGTTTGATGATGACAGGCAACCCTCTGAGTTACTTGGGTCGAAGGCGAAATCGGGCTTAGAGAAGCTCCAGGATGACAGAAAAACACTACCCATCTACACCTACCGTGATAAATTGCTTGAAGCTGTTGAAAATCATCAAGTTCTGGTTATTGTTGGGGAAACTGGTTCTGGAAAAACTACGCAGATACCCCAATATCTTCATGAGGCTGGATACACAAAGCGTGGAAAGATTGGGTGCACACAGCCACGGCGAGTTGCTGCTATGAGTGTTGCTGCAAGGGTTTCTCAAGAAATGGGGGTCAAACTTGGGCACGAGGTTGGTTATTCTATTCGTTTTGAGGATTGCACATCCGAAAAGACTGTTTTGAAATATATGACAGATGGAATGTTGTTGCGAGAATTCCTTGGTGAACCAGATCTGGCGAGTTACAGTGTGGTGATGGTGGACGAGGCCCATGAACGAACACTCTCAACTGATATTCTATTTGGACTAGTGAAGGATATTGCTCGATTTAGACCAGATCTCAAACTGCTTATCTCAAGTGCAACGCTTGATGCTGAGAAGTTCAGTGATTATTTTGATTCTGCTCCAATTTTCAAAATTCCAGGGAGGCGGTATGCTGTTGATATCCATTACACGAAAGCACCAGAAGCCGATTACTTAGATGCAGCAATTGTCACTGCACTTCAAATCCATGTGACGCAACCACCTGGAGATATATTGGTATTCCTCACTGGTCAGGAAGAGATTGAAACAGCAGAAGAAATATTGAAGCACAGAACAAGGGGCCTAGGGACAAAAATTGCTGAGCTGATTATTTGCCCCATATATGCAAACCTACCTACTGAGCTGCAAGCAAAAATTTTTGAAGCCACACCTGATGGGGCAAGGAAGGTTGTCCTTGCCACAAATATAGCTGAAACTTCGTTGACCATTGATGGGATCAAATATGTTATTGACCCAGGGTTTTGCAAGATGAAGTCGTATAACCCAAGGACTGGAATGGAGTCATTGCTAGTTACTCCCATCTCAAAGGCATCAGCAATGCAGAGGGCAGGTCGATCTGGTCGAACGGGTCCTGGAAAGTGCTTCCGGTTATATACTGCCTACAATTATTACAATGATTTAGATGATAACACAGTACCAGAAGTACAAAGAACTAATCTTGCAAATGTTGTGCTTACGCTGAAGAGCCTTGGTATTCATGACTTATTGCATTTTGATTTTATGGACCCTCCGCCATCTGAAGCGTTACTGAAAGCCCTGGAACTGTTATTTGCACTAAGTGCATTAAATAAAGTGGGTGAGTTGACTAAAGTGGGTAGAAGGATGGCGGAGTTTCCTCTTGATCCCATGCTATCTAAGATGATAGTTGCTTCTGATCAGTACAAGTGTTCAGATGAAGTCATTTCCATTGCTGCCATGCTTTCCATTGGTAATTCCATCTTTTACCGTCCCAAGGACAAACAAGTCCATGCTGACAATGCTCGTTTGAATTTTCACACCGGGAATGTGGGAGATCACATTGCATTGCTCAAGGTCTATAACTCATGGAAAGAGACCAACTTCTCAACCCAGTGGTGTTATGAAAACTATATACAGGTGAGGAGCATGAAGCGTGCTAGAGATATTAGAGACCAGCTTGAGGGACTCTTGGAGAGGGTTGAGATTGAGCTGGTCTCAAATCTCAGTGATTACGAGACCATAAAGAAGGCCATTACATCTGGCTTCTTCCCTCATTCCGCAAAGCTTCAAAAGAATGGATCTTATAGAACAGTCAAACATCCACAGACTGTTCATATACATCCCAGCTCAGGGCTGTCACAGGTGCTTCCGAGATGGGTTATATACCATGAATTGGTACTTACAACCAAGGAATATATGAGACAGGTAACAGAATTAAAGCCGGAGTGGTTAGTGGAAATAGCTCCTCATTATTACCAGCTGAAGGATGTTGAAGATTCGATGTCAAAGAAAATGCCCCGGGGAGAAGGGCGCCCACAACAGGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000375 GO:0000377 GO:0000398 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009790 GO:0009791 GO:0009793 GO:0009892 GO:0009987 GO:0010154 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0016020 GO:0016070 GO:0016071 GO:0016441 GO:0016458 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0022414 GO:0031047 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0035194 GO:0040029 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048316 GO:0048519 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DEAD HA2 Helicase_C OB_NTP_bind

Protein Analysis

1053

Amino Acids

119.94

Weight (kDa)

5.59

Isoelectric Point (pI)

41.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0000463)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32490 AT1G32490 AT2G35340 AT2G35340 AT4G16680 AT4G16680
fragaria_vesca	FvH4_1g06760 FvH4_1g06761 FvH4_1g06770 FvH4_3g40380 FvH4_3g40450 FvH4_5g14240 FvH4_5g14240 FvH4_5g14240 FvH4_5g14240 FvH4_7g01330 FvH4_7g01330
malus_domestica	MD02G1072400.v1.1 MD02G1072500.v1.1 MD02G1088100.v1.1 MD06G1200100.v1.1 MD07G1285300.v1.1 MD08G1042900.v1.1
prunus_persica	Prupe.5G201700_v2.0.a1 Prupe.5G201700_v2.0.a1 Prupe.6G014300_v2.0.a1 Prupe.6G159800_v2.0.a1 Prupe.7G201500_v2.0.a1 Prupe.8G103900_v2.0.a1 Prupe.8G104500_v2.0.a1
pyrus_communis	pycom02g05640 pycom02g05650 pycom14g17310
rosa_chinensis	RchiOBHm_Chr2g0092491 RchiOBHm_Chr2g0092541 RchiOBHm_Chr5g0073091 RchiOBHm_Chr6g0263651 RchiOBHm_Chr6g0263711 RchiOBHm_Chr7g0182681
rosa_laevigata	RLG00000005109 RLG00000014320 RLG00000014322 RLG00000014324 RLG00000014326 RLG00000014327 RLG00000016318 RLG00000016322 RLG00000036362
rosa_multiflora	Rmu_sc0000014.1_g000045 Rmu_sc0002174.1_g000001 Rmu_sc0003570.1_g000001 Rmu_sc0004296.1_g000005 Rmu_sc0004296.1_g000014 Rmu_sc0005592.1_g000025
rosa_roxburghii	Rroxscaffold_176G00431160 Rroxscaffold_176G00431170 Rroxscaffold_2G00148990 Rroxscaffold_2G00149040 Rroxscaffold_3G00271070 Rroxscaffold_6G00409880 Rroxscaffold_7G00204020 Rroxscaffold_7G00204040 Rroxscaffold_7G00204070
rosa_rugosa	Rorug02G0027100 Rorug02G0027200 Rorug02G0027300 Rorug05G0421000 Rorug06G0449100
rosa_samantha	Rh2AG072900 Rh2AG073200 Rh2BG073500 Rh2BG074100 Rh2CG074700 Rh2DG071600 Rh2DG072300 Rh5AG478000 Rh5BG498700 Rh5DG510800 Rh6AG125300 Rh6BG121400 Rh6CG119800 Rh7AG052900 Rh7BG052500 Rh7CG054000 Rh7DG052300
rosa_wichuraiana	Rw0G005280 Rw2G005970 Rw2G006000 Rw5G044390 Rw6G010890 Rw7G004310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2615
Acc36I	ACCTGC	1 cut(s)	2192
AccB1I	GGYRCC	1 cut(s)	3141
AccB7I	CCANNNNNTGG	2 cut(s)	2144, 3004
AccBSI	CCGCTC	1 cut(s)	664
AciI	CCGC	5 cut(s)	664, 1759, 2384, 2480, 2889
AclWI	GGATC	5 cut(s)	1026, 1110, 2096, 2489, 2917
AcoI	YGGCCR	1 cut(s)	171
AcsI	RAATTY	6 cut(s)	152, 1046, 1544, 1746, 2007, 2641
AcuI	CTGAAG	5 cut(s)	213, 816, 2354, 2412, 3113
AcyI	GRCGYC	1 cut(s)	3142
AdeI	CACNNNGTG	1 cut(s)	2432
AfaI	GTAC	6 cut(s)	86, 884, 2289, 2298, 2534, 3009
AhlI	ACTAGT	1 cut(s)	1636
AjnI	CCWGG	8 cut(s)	348, 365, 1212, 1750, 1855, 2107, 2224, 2409
AjuI	GAANNNNNNNTTGG	2 cut(s)	138, 170
Alw21I	GWGCWC	1 cut(s)	1385
Alw26I	GTCTC	7 cut(s)	454, 741, 2699, 2775, 2830, 2840, 3025
Alw44I	GTGCAC	1 cut(s)	1381
AlwI	GGATC	5 cut(s)	1026, 1110, 2096, 2489, 2917
Ama87I	CYCGRG	1 cut(s)	3129
AoxI	GGCC	4 cut(s)	171, 1596, 1933, 2859
ApaLI	GTGCAC	1 cut(s)	1381
ApeKI	GCWGC	7 cut(s)	263, 584, 1403, 1418, 1814, 1996, 2564
ApoI	RAATTY	6 cut(s)	152, 1046, 1544, 1746, 2007, 2641
Asp700I	GAANNNNTTC	3 cut(s)	392, 481, 691
AspA2I	CCTAGG	1 cut(s)	1936
AspLEI	GCGC	1 cut(s)	3144
AspS9I	GGNCC	5 cut(s)	964, 1597, 1933, 2222, 2377
AsuC2I	CCSGG	3 cut(s)	2653, 3130, 3131
AvaI	CYCGRG	1 cut(s)	3129
AvaII	GGWCC	3 cut(s)	964, 2222, 2377
AvrII	CCTAGG	1 cut(s)	1936
BaeGI	GKGCMC	3 cut(s)	216, 1385, 1458
BaeI	ACNNNNGTAYC	2 cut(s)	15, 48
BanI	GGYRCC	1 cut(s)	3141
BauI	CACGAG	1 cut(s)	1457
BbsI	GAAGAC	2 cut(s)	201, 293
Bbv12I	GWGCWC	1 cut(s)	1385
BbvI	GCAGC	7 cut(s)	250, 596, 1390, 1405, 1826, 1983, 2551
BceAI	ACGGC	1 cut(s)	1409
BcgI	CGANNNNNNTGC	2 cut(s)	164, 198
BciT130I	CCWGG	8 cut(s)	350, 367, 1214, 1752, 1857, 2109, 2226, 2411
BciVI	GTATCC	3 cut(s)	43, 571, 1349
BclI	TGATCA	2 cut(s)	532, 2527
BcnI	CCSGG	3 cut(s)	2653, 3130, 3131
BcoDI	GTCTC	7 cut(s)	454, 741, 2699, 2775, 2830, 2840, 3025
BcuI	ACTAGT	1 cut(s)	1636
BfaI	CTAG	4 cut(s)	1637, 1937, 2162, 2769
BfoI	RGCGCY	1 cut(s)	3145
BfuAI	ACCTGC	1 cut(s)	2192
BfuI	GTATCC	3 cut(s)	43, 571, 1349
BglII	AGATCT	2 cut(s)	1561, 1666
BisI	GCNGC	7 cut(s)	264, 585, 1404, 1419, 1815, 1997, 2565
BlnI	CCTAGG	1 cut(s)	1936
BlpI	GCTNAGC	1 cut(s)	1953
BlsI	GCNGC	7 cut(s)	265, 586, 1405, 1420, 1816, 1998, 2566
Bme18I	GGWCC	3 cut(s)	964, 2222, 2377
BmeT110I	CYCGRG	1 cut(s)	3129
BmgT120I	GGNCC	5 cut(s)	964, 1597, 1933, 2222, 2377
BmiI	GGNNCC	5 cut(s)	965, 1934, 2223, 2379, 3143
BmrI	ACTGGG	1 cut(s)	2716
BmsI	GCATC	7 cut(s)	295, 879, 886, 1133, 1690, 1801, 2192
BmuI	ACTGGG	1 cut(s)	2716
BpiI	GAAGAC	2 cut(s)	201, 293
BplI	GAGNNNNNCTC	2 cut(s)	2810, 2842
BpmI	CTGGAG	2 cut(s)	1196, 1878
Bpu10I	CCTNAGC	1 cut(s)	2959
Bpu1102I	GCTNAGC	1 cut(s)	1953
BpuEI	CTTGAG	5 cut(s)	430, 1416, 1669, 2666, 2810
BpuMI	CCSGG	3 cut(s)	2653, 3130, 3131
BsaBI	GATNNNNATC	1 cut(s)	1083
BsaHI	GRCGYC	1 cut(s)	3142
BsaI	GGTCTC	4 cut(s)	2699, 2775, 2830, 2840
BsaWI	WCCGGW	1 cut(s)	2238
Bse118I	RCCGGY	1 cut(s)	118
Bse1I	ACTGG	5 cut(s)	846, 1312, 1885, 2149, 2722
Bse3DI	GCAATG	6 cut(s)	658, 2156, 2196, 2559, 2670, 2675
Bse8I	GATNNNNATC	1 cut(s)	1083
BseBI	CCWGG	8 cut(s)	350, 367, 1214, 1752, 1857, 2109, 2226, 2411
BseJI	GATNNNNATC	1 cut(s)	1083
BseMI	GCAATG	6 cut(s)	658, 2156, 2196, 2559, 2670, 2675
BseMII	CTCAG	9 cut(s)	80, 870, 982, 1161, 1695, 1944, 1983, 2848, 2973
BseNI	ACTGG	5 cut(s)	846, 1312, 1885, 2149, 2722
BseRI	GAGGAG	4 cut(s)	647, 923, 2767, 3066
BseSI	GKGCMC	3 cut(s)	216, 1385, 1458
BseX3I	CGGCCG	1 cut(s)	171
BseXI	GCAGC	7 cut(s)	250, 596, 1390, 1405, 1826, 1983, 2551
BseYI	CCCAGC	2 cut(s)	974, 2954
BsgI	GTGCAG	1 cut(s)	1812
Bsh1285I	CGRYCG	1 cut(s)	174
BshFI	GGCC	4 cut(s)	173, 1598, 1935, 2861
BshNI	GGYRCC	1 cut(s)	3141
BsiEI	CGRYCG	1 cut(s)	174
BsiHKAI	GWGCWC	1 cut(s)	1385
BsiHKCI	CYCGRG	1 cut(s)	3129
BsiSI	CCGG	5 cut(s)	119, 2239, 2652, 3053, 3130
BslFI	GGGAC	5 cut(s)	465, 977, 1954, 2586, 2808
BsmAI	GTCTC	7 cut(s)	454, 741, 2699, 2775, 2830, 2840, 3025
BsmBI	CGTCTC	2 cut(s)	454, 741
BsmFI	GGGAC	5 cut(s)	465, 977, 1954, 2586, 2808
BsnI	GGCC	4 cut(s)	173, 1598, 1935, 2861
Bso31I	GGTCTC	4 cut(s)	2699, 2775, 2830, 2840
BsoBI	CYCGRG	1 cut(s)	3129
Bsp1286I	GDGCHC	3 cut(s)	216, 1385, 1458
Bsp1720I	GCTNAGC	1 cut(s)	1953
BspACI	CCGC	5 cut(s)	664, 1759, 2384, 2480, 2889
BspANI	GGCC	4 cut(s)	173, 1598, 1935, 2861
BspCNI	CTCAG	9 cut(s)	79, 871, 981, 1162, 1696, 1945, 1984, 2847, 2972
BspHI	TCATGA	2 cut(s)	1345, 2350
BspLI	GGNNCC	5 cut(s)	965, 1934, 2223, 2379, 3143
BspMI	ACCTGC	1 cut(s)	2192
BspPI	GGATC	5 cut(s)	1026, 1110, 2096, 2489, 2917
BspQI	GCTCTTC	1 cut(s)	2330
BspT107I	GGYRCC	1 cut(s)	3141
BspTNI	GGTCTC	4 cut(s)	2699, 2775, 2830, 2840
BsrBI	CCGCTC	1 cut(s)	664
BsrDI	GCAATG	6 cut(s)	658, 2156, 2196, 2559, 2670, 2675
BsrFI	RCCGGY	1 cut(s)	118
BsrI	ACTGG	5 cut(s)	846, 1312, 1885, 2149, 2722
BssAI	RCCGGY	1 cut(s)	118
BssNI	GRCGYC	1 cut(s)	3142
BssSI	CACGAG	1 cut(s)	1457
BssT1I	CCWWGG	6 cut(s)	1549, 1936, 2138, 2341, 2604, 3018
Bst2BI	CACGAG	1 cut(s)	1457
Bst2UI	CCWGG	8 cut(s)	350, 367, 1214, 1752, 1857, 2109, 2226, 2411
Bst4CI	ACNGT	9 cut(s)	76, 1250, 1507, 1577, 2287, 2418, 2600, 2923, 2941
Bst6I	CTCTTC	5 cut(s)	510, 624, 845, 1884, 2330
BstACI	GRCGYC	1 cut(s)	3142
BstAPI	GCANNNNNTGC	1 cut(s)	2432
BstC8I	GCNNGC	3 cut(s)	137, 2001, 2766
BstDSI	CCRYGG	1 cut(s)	1391
BstH2I	RGCGCY	1 cut(s)	3145
BstHHI	GCGC	1 cut(s)	3144
BstMAI	GTCTC	7 cut(s)	454, 741, 2699, 2775, 2830, 2840, 3025
BstMCI	CGRYCG	1 cut(s)	174
BstMWI	GCNNNNNNNGC	4 cut(s)	556, 1796, 2432, 2630
BstNI	CCWGG	8 cut(s)	350, 367, 1214, 1752, 1857, 2109, 2226, 2411
BstSLI	GKGCMC	3 cut(s)	216, 1385, 1458
BstV1I	GCAGC	7 cut(s)	250, 596, 1390, 1405, 1826, 1983, 2551
BstV2I	GAAGAC	2 cut(s)	201, 293
BstX2I	RGATCY	3 cut(s)	1561, 1666, 2909
BstYI	RGATCY	3 cut(s)	1561, 1666, 2909
BstZI	CGGCCG	1 cut(s)	171
BsuI	GTATCC	3 cut(s)	43, 571, 1349
BsuRI	GGCC	4 cut(s)	173, 1598, 1935, 2861
BtgI	CCRYGG	1 cut(s)	1391
BtsI	GCAGTG	1 cut(s)	1824
BveI	ACCTGC	1 cut(s)	2192
Cac8I	GCNNGC	3 cut(s)	137, 2001, 2766
CciI	TCATGA	2 cut(s)	1345, 2350
CfoI	GCGC	1 cut(s)	3144
Cfr10I	RCCGGY	1 cut(s)	118
Cfr13I	GGNCC	5 cut(s)	964, 1597, 1933, 2222, 2377
Cfr9I	CCCGGG	1 cut(s)	3129
CseI	GACGC	1 cut(s)	1855
Csp6I	GTAC	6 cut(s)	85, 883, 2288, 2297, 2533, 3008
CviQI	GTAC	6 cut(s)	85, 883, 2288, 2297, 2533, 3008
DinI	GGCGCC	1 cut(s)	3143
DraIII	CACNNNGTG	1 cut(s)	2432
DrdI	GACNNNNNNGTC	1 cut(s)	2615
DseDI	GACNNNNNNGTC	1 cut(s)	2615
EaeI	YGGCCR	1 cut(s)	171
EagI	CGGCCG	1 cut(s)	171
Eam1104I	CTCTTC	5 cut(s)	510, 624, 845, 1884, 2330
EarI	CTCTTC	5 cut(s)	510, 624, 845, 1884, 2330
EciI	GGCGGA	2 cut(s)	2373, 2495
EclXI	CGGCCG	1 cut(s)	171
Eco130I	CCWWGG	6 cut(s)	1549, 1936, 2138, 2341, 2604, 3018
Eco31I	GGTCTC	4 cut(s)	2699, 2775, 2830, 2840
Eco32I	GATATC	2 cut(s)	874, 1774
Eco47I	GGWCC	3 cut(s)	964, 2222, 2377
Eco52I	CGGCCG	1 cut(s)	171
Eco57I	CTGAAG	5 cut(s)	213, 816, 2354, 2412, 3113
Eco88I	CYCGRG	1 cut(s)	3129
EcoO109I	RGGNCCY	3 cut(s)	964, 1933, 2222
EcoRI	GAATTC	1 cut(s)	1544
EcoRII	CCWGG	8 cut(s)	348, 365, 1212, 1750, 1855, 2107, 2224, 2409
EcoRV	GATATC	2 cut(s)	874, 1774
EcoT14I	CCWWGG	6 cut(s)	1549, 1936, 2138, 2341, 2604, 3018
EcoT22I	ATGCAT	1 cut(s)	658
EgeI	GGCGCC	1 cut(s)	3143
EheI	GGCGCC	1 cut(s)	3143
ErhI	CCWWGG	6 cut(s)	1549, 1936, 2138, 2341, 2604, 3018
Esp3I	CGTCTC	2 cut(s)	454, 741
FalI	AAGNNNNNCTT	4 cut(s)	392, 424, 463, 495
FaqI	GGGAC	5 cut(s)	465, 977, 1954, 2586, 2808
FbaI	TGATCA	2 cut(s)	532, 2527
Fnu4HI	GCNGC	7 cut(s)	264, 585, 1404, 1419, 1815, 1997, 2565
Fsp4HI	GCNGC	7 cut(s)	264, 585, 1404, 1419, 1815, 1997, 2565
FspBI	CTAG	4 cut(s)	1637, 1937, 2162, 2769
GlaI	GCGC	1 cut(s)	3143
GluI	GCNGC	7 cut(s)	264, 585, 1404, 1419, 1815, 1997, 2565
GsaI	CCCAGC	2 cut(s)	978, 2958
GsuI	CTGGAG	2 cut(s)	1196, 1878
HaeII	RGCGCY	1 cut(s)	3145
HaeIII	GGCC	4 cut(s)	173, 1598, 1935, 2861
HapII	CCGG	5 cut(s)	119, 2239, 2652, 3053, 3130
HgaI	GACGC	1 cut(s)	1855
HhaI	GCGC	1 cut(s)	3144
Hin1I	GRCGYC	1 cut(s)	3142
Hin6I	GCGC	1 cut(s)	3142
HinP1I	GCGC	1 cut(s)	3142
HincII	GTYRAC	3 cut(s)	600, 2076, 2457
HindII	GTYRAC	3 cut(s)	600, 2076, 2457
HindIII	AAGCTT	3 cut(s)	137, 1008, 2894
HpaI	GTTAAC	1 cut(s)	600
HpaII	CCGG	5 cut(s)	119, 2239, 2652, 3053, 3130
Hpy166II	GTNNAC	7 cut(s)	600, 812, 1383, 1556, 1591, 2076, 2457
Hpy8I	GTNNAC	7 cut(s)	600, 812, 1383, 1556, 1591, 2076, 2457
HpyAV	CCTTC	8 cut(s)	397, 1180, 1636, 2032, 2466, 2851, 3088, 3131
HpyCH4III	ACNGT	9 cut(s)	76, 1250, 1507, 1577, 2287, 2418, 2600, 2923, 2941
HpyCH4IV	ACGT	1 cut(s)	50
HpyF10VI	GCNNNNNNNGC	4 cut(s)	556, 1796, 2432, 2630
HpySE526I	ACGT	1 cut(s)	50
Hsp92I	GRCGYC	1 cut(s)	3142
HspAI	GCGC	1 cut(s)	3142
KasI	GGCGCC	1 cut(s)	3141
Ksp22I	TGATCA	2 cut(s)	532, 2527
KspAI	GTTAAC	1 cut(s)	600
LguI	GCTCTTC	1 cut(s)	2330
LmnI	GCTCC	9 cut(s)	6, 547, 556, 661, 721, 1215, 1738, 2754, 3079
Lsp1109I	GCAGC	7 cut(s)	250, 596, 1390, 1405, 1826, 1983, 2551
LweI	GCATC	7 cut(s)	295, 879, 886, 1133, 1690, 1801, 2192
MaeI	CTAG	4 cut(s)	1637, 1937, 2162, 2769
MaeII	ACGT	1 cut(s)	50
MaeIII	GTNAC	8 cut(s)	1173, 1571, 1822, 1843, 2164, 2397, 2967, 3037
MbiI	CCGCTC	1 cut(s)	664
MfeI	CAATTG	2 cut(s)	551, 1818
MflI	RGATCY	3 cut(s)	1561, 1666, 2909
MhlI	GDGCHC	3 cut(s)	216, 1385, 1458
Mly113I	GGCGCC	1 cut(s)	3142
MlyI	GAGTC	4 cut(s)	421, 518, 2162, 2790
Mph1103I	ATGCAT	1 cut(s)	658
MroXI	GAANNNNTTC	3 cut(s)	392, 481, 691
MseI	TTAA	7 cut(s)	468, 599, 614, 683, 921, 2438, 3047
MslI	CAYNNNNRTG	1 cut(s)	272
MspA1I	CMGCKG	1 cut(s)	3091
MspI	CCGG	5 cut(s)	119, 2239, 2652, 3053, 3130
MunI	CAATTG	2 cut(s)	551, 1818
MvaI	CCWGG	8 cut(s)	350, 367, 1214, 1752, 1857, 2109, 2226, 2411
MwoI	GCNNNNNNNGC	4 cut(s)	556, 1796, 2432, 2630
NarI	GGCGCC	1 cut(s)	3142
NciI	CCSGG	3 cut(s)	2653, 3130, 3131
NlaIV	GGNNCC	5 cut(s)	965, 1934, 2223, 2379, 3143
NmuCI	GTSAC	3 cut(s)	1822, 1843, 2967
NsiI	ATGCAT	1 cut(s)	658
PagI	TCATGA	2 cut(s)	1345, 2350
PasI	CCCWGGG	1 cut(s)	2108
PciSI	GCTCTTC	1 cut(s)	2330
PcsI	WCGNNNNNNNCGW	1 cut(s)	2212
PdmI	GAANNNNTTC	3 cut(s)	392, 481, 691
PfeI	GAWTC	6 cut(s)	224, 235, 377, 393, 1727, 3107
PflMI	CCANNNNNTGG	2 cut(s)	2144, 3004
PfoI	TCCNGGA	3 cut(s)	365, 1212, 2224
PkrI	GCNGC	7 cut(s)	265, 586, 1405, 1420, 1816, 1998, 2566
PleI	GAGTC	4 cut(s)	420, 517, 2161, 2790
PluTI	GGCGCC	1 cut(s)	3145
PpsI	GAGTC	4 cut(s)	420, 517, 2161, 2790
PpuMI	RGGWCCY	2 cut(s)	964, 2222
Psp5II	RGGWCCY	2 cut(s)	964, 2222
Psp6I	CCWGG	8 cut(s)	348, 365, 1212, 1750, 1855, 2107, 2224, 2409
PspFI	CCCAGC	2 cut(s)	974, 2954
PspGI	CCWGG	8 cut(s)	348, 365, 1212, 1750, 1855, 2107, 2224, 2409
PspN4I	GGNNCC	5 cut(s)	965, 1934, 2223, 2379, 3143
PspPI	GGNCC	5 cut(s)	964, 1597, 1933, 2222, 2377
PspPPI	RGGWCCY	2 cut(s)	964, 2222
PsuI	RGATCY	3 cut(s)	1561, 1666, 2909
PvuII	CAGCTG	1 cut(s)	3091
RsaI	GTAC	6 cut(s)	86, 884, 2289, 2298, 2534, 3009
RsaNI	GTAC	6 cut(s)	85, 883, 2288, 2297, 2533, 3008
RseI	CAYNNNNRTG	1 cut(s)	272
SapI	GCTCTTC	1 cut(s)	2330
SaqAI	TTAA	7 cut(s)	468, 599, 614, 683, 921, 2438, 3047
SatI	GCNGC	7 cut(s)	264, 585, 1404, 1419, 1815, 1997, 2565
Sau96I	GGNCC	5 cut(s)	964, 1597, 1933, 2222, 2377
SchI	GAGTC	4 cut(s)	421, 518, 2162, 2790
SduI	GDGCHC	3 cut(s)	216, 1385, 1458
SfaNI	GCATC	7 cut(s)	295, 879, 886, 1133, 1690, 1801, 2192
SfoI	GGCGCC	1 cut(s)	3143
SinI	GGWCC	3 cut(s)	964, 2222, 2377
SmaI	CCCGGG	1 cut(s)	3131
SmiMI	CAYNNNNRTG	1 cut(s)	272
SmlI	CTYRAG	5 cut(s)	409, 1431, 1684, 2681, 2789
SmoI	CTYRAG	5 cut(s)	409, 1431, 1684, 2681, 2789
SpeI	ACTAGT	1 cut(s)	1636
SsiI	CCGC	5 cut(s)	664, 1759, 2384, 2480, 2889
SspDI	GGCGCC	1 cut(s)	3141
SspI	AATATT	2 cut(s)	640, 1914
SspMI	CTAG	4 cut(s)	1637, 1937, 2162, 2769
StyI	CCWWGG	6 cut(s)	1549, 1936, 2138, 2341, 2604, 3018
TaaI	ACNGT	9 cut(s)	76, 1250, 1507, 1577, 2287, 2418, 2600, 2923, 2941
TaiI	ACGT	1 cut(s)	53
TaqI	TCGA	6 cut(s)	675, 1184, 1654, 2206, 2215, 3110
TatI	WGTACW	4 cut(s)	84, 882, 2296, 2532
TfiI	GAWTC	6 cut(s)	224, 235, 377, 393, 1727, 3107
Tru1I	TTAA	7 cut(s)	468, 599, 614, 683, 921, 2438, 3047
Tru9I	TTAA	7 cut(s)	468, 599, 614, 683, 921, 2438, 3047
TseFI	GTSAC	3 cut(s)	1822, 1843, 2967
TseI	GCWGC	7 cut(s)	263, 584, 1403, 1418, 1814, 1996, 2564
Tsp45I	GTSAC	3 cut(s)	1822, 1843, 2967
TspGWI	ACGGA	1 cut(s)	617
TspMI	CCCGGG	1 cut(s)	3129
Van91I	CCANNNNNTGG	2 cut(s)	2144, 3004
VneI	GTGCAC	1 cut(s)	1381
VpaK11BI	GGWCC	3 cut(s)	964, 2222, 2377
XapI	RAATTY	6 cut(s)	152, 1046, 1544, 1746, 2007, 2641
XmaI	CCCGGG	1 cut(s)	3129
XmaJI	CCTAGG	1 cut(s)	1936
XmnI	GAANNNNTTC	3 cut(s)	392, 481, 691
XspI	CTAG	4 cut(s)	1637, 1937, 2162, 2769
Zsp2I	ATGCAT	1 cut(s)	658

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.