Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0000463

Physical Location & Seq

Genomic Coordinates Forward (+)

16232993 .. 16242723

Gene Structure 9731 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G201700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3150 bp

ATGGGGAGCGAGAGCAATCTGAAGACATGGGTATCCGATAAGTTGATGACGTTTCTCGGATATTCTCAGCCCACTGTTGTTCAGTACATTATTGGATTAACCAAACAAGCAAAATCACCGGCTGATGTGGTGGGCAAGCTTGTAGAATTTGGGTTGTCCTCTTCGGCCGAAACAAGTGCATTTGCTGAAGACATCTTCGCAAGAGTGCCCCGTAAAGAATCTGGTTTGAATCTATATCAGAAACAAGAGAGGGAAGCTGCGATGTTGGTGAAGAAGCAGAAGACATATTCTCTCTTGGATGCAGATGACCAAGATGACGATGATGGCGATAGATCTTCTGTCCAGGTTGTTTCTGAGTCCAGGAAAGCTGACTCCCATAAGAAACGTTTCAGGAAGAAGGTCTTGAGTCAAGAAGATGAAGATGATGAGGTGATTGCACAAGAGAAAGAAGAGAGACGAGTTAAAAGACGAATTTCCCCAGATGACAATGATGGTTCAGAGTCAGAAGAAGAAAGATTGCGTGATCAAAGAGAGAGGGAGCAATTGGAGCAGAATATAAGGGAACGGGATACAGCAGCTACACGAAAGTTAACAGAGAGAAAATTAACACGAAAGGAAGAAGAGGAGGCTATTCGGAGAAGCAATGCATTGGAGCGGAATGACCTTGAAGATTTAAGAAAAGTTTCAAGACAAGAATATCTCAAGAAGAGGGAGCAAAAGAAATTGGAGGAAATCAGAGATGATATAGAGGATGAGCAATACTTATTTGATGGTGTGAAGCTCACTGAAGTAGAATATCGCGAACTAAGTTACAAGAAACAAATATACGAGCTGGTGAAGAAGAGGTCAGATGAGGTTGAGGATACCACTGAGTACAGGATGCCAGATGCGTACGATGAGGAGGGTGGTGTTAATCAGGAAAAGAGATTTTCTGTCGCTGTGCAACGCTACAGGGACCTCAGTGCTGGGGATAAAATGAACCCATTTGCAGAACAGGAAGCTTGGGAGGATCATCAAATTGGAAAAGCAACGCTGAAATTTGGTTCAAAAAATAAGAAACAAATATCTGATGAGTATCAATTTGTATTTGAGGATCAGATTGATTTTATCAAGGCATCAGTGATGGATGGTGATGAGTTTGATGATGACGGGCAACCCTCTGAGTTACTTGAGTCGAAGGCGAAAACGGCCTTAGAGAAGCTCCAGGATGACAGAAAAACATTACCCATCTACACCTACCGCGATCAATTGCTTGAAGCTGTTGAAAATCATCAGGTTCTTGTTATTGTTGGTGAAACTGGTTCTGGAAAAACCACACAGATACCCCAATATCTTCATGAGGCTGGATACACAAAGCGTGGAAAGATTGGGTGCACACAGCCACGACGAGTTGCTGCTATGAGTGTTGCTGCAAGGGTTTCTCAAGAAATGGGGGTCAAACTTGGGCACGAGGTTGGTTATTCTATTCGTTTTGAGGATTGCACATCCGAAAAGACTGTTTTGAAATATATGACAGATGGAATGCTGTTGCGAGAGTTCCTTGGTGAACCAGATCTGGCGAGTTACAGTGTGGTGATGGTGGACGAGGCCCATGAACGAACACTCTCGACTGATATTCTATTTGGACTAGTAAAGGATATTGCTCGATTTAGACCGGATCTCAAACTGCTTATCTCAAGTGCAACGCTTGATGCTGAGAAGTTCAGTGATTATTTTGATTCTGCTCCAATTTTCAAAATTCCAGGGAGGCGGTATCCTGTTGAAATACATTATACGAAAGCACCAGAAGCTGATTACTTAGATGCAGCAATTGTCACTGCACTTCAAATCCATGTGACACAACCACCTGGAGATATATTGGTGTTCCTTACTGGTCAGGAAGAGATTGAAACAGCAGAAGAAATATTGAAGCACAGAACAAGGGGTCTAGGGACAAAAATTGCTGAGCTGATTATTTGTCCCATATATGCAAACCTACCTACTGAGCTGCAAGCAAAAATTTTTGAAGCCACACCTGATGGGGCAAGGAAGGTTGTCCTTGCCACAAATATAGCTGAAACTTCGTTGACCATTGATGGGATCAAATATGTTATTGACCCTGGGTTTTGCAAGATGAAGTCGTATAACCCAAGGACTGGAATGGAGTCATTGCTAGTTACTCCCATCTCAAAGGCATCTGCAATGCAGAGGGCAGGTCGATCTGGTCGAACTGGTCCTGGAAAGTGCTTCCGGTTATATACTGCCTACAATTATTACAATGATTTAGATGATAACACAGTACCAGAAGTACAAAGAACTAATCTTGCAAATGTTGTGCTTACGTTGAAGAGCCTTGGTATTCATGACTTATTACACTTTGATTTTATGGACCCTCCTCCATCTGAAGCATTACTAAAAGCCCTGGAACTGTTGTTTGCACTAAGTGCATTAAATAAAGTGGGTGAGTTGACTAAAGTCGGTAGAAGGATGGCGGAGTTTCCTCTTGATCCCATGCTATCTAAGATGATAGTTGCTTCTGATAAGTACAAGTGTTCAGATGAGGTCATTTCCATTGCTGCCATGCTTTCCATTGGTAATTCCATCTTTTACCGTCCCAAGGACAAACAAGTTCATGCTGACAATGCACGTTTGAATTTTCACACCGGGAACGTGGGAGATCACATTGCATTGCTCAAGGTGTATAACTCATGGAAAGAGACCAACTTCTCAACCCAGTGGTGCTATGAAAACTATATACAGGTGAGGAGCATGAAGCGTGCTAGAGATATTAGAGACCAGCTTGAGGGACTCTTGGAGAGGGTTGAGATTGAGCTGGTCTCAAATCTCAGTGATTATGAGACCATAAAGAAGGCCATTACATCTGGCTTCTTCCCTCATTCTGCAAAGCTTCAAAAGAATGGATCTTATAGAACAGTCAAACATCCACAGACCGTCCATATACATCCCAGCTCAGGGCTATCACAGGTGCTTCCGAGATGGGTTATATACCATGAATTGGTACTTACAACCAAGGAATATATGAGACAGGTAACAGAATTAAAGCCGGAGTGGTTAGTGGAAATAGCTCCGCATTATTACCAGCTGAAGGATGTTGAAGATTTGATGTCAAAGAAAATGCCCCGTGGAGAAGGGCGTGCACAACAGGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000375 GO:0000377 GO:0000398 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009790 GO:0009791 GO:0009793 GO:0009892 GO:0009987 GO:0010154 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0016020 GO:0016070 GO:0016071 GO:0016441 GO:0016458 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0022414 GO:0031047 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0035194 GO:0040029 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048316 GO:0048519 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DEAD HA2 Helicase_C OB_NTP_bind

Protein Analysis

1050

Amino Acids

119.9

Weight (kDa)

5.56

Isoelectric Point (pI)

41.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0000463)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32490 AT1G32490 AT2G35340 AT2G35340 AT4G16680 AT4G16680
fragaria_vesca	FvH4_1g06760 FvH4_1g06761 FvH4_1g06770 FvH4_3g40380 FvH4_3g40450 FvH4_5g14240 FvH4_5g14240 FvH4_5g14240 FvH4_5g14240 FvH4_7g01330 FvH4_7g01330
malus_domestica	MD02G1072400.v1.1 MD02G1072500.v1.1 MD02G1088100.v1.1 MD06G1200100.v1.1 MD07G1285300.v1.1 MD08G1042900.v1.1
prunus_persica	Prupe.5G201700_v2.0.a1 Prupe.5G201700_v2.0.a1 Prupe.6G014300_v2.0.a1 Prupe.6G159800_v2.0.a1 Prupe.7G201500_v2.0.a1 Prupe.8G103900_v2.0.a1 Prupe.8G104500_v2.0.a1
pyrus_communis	pycom02g05640 pycom02g05650 pycom14g17310
rosa_chinensis	RchiOBHm_Chr2g0092491 RchiOBHm_Chr2g0092541 RchiOBHm_Chr5g0073091 RchiOBHm_Chr6g0263651 RchiOBHm_Chr6g0263711 RchiOBHm_Chr7g0182681
rosa_laevigata	RLG00000005109 RLG00000014320 RLG00000014322 RLG00000014324 RLG00000014326 RLG00000014327 RLG00000016318 RLG00000016322 RLG00000036362
rosa_multiflora	Rmu_sc0000014.1_g000045 Rmu_sc0002174.1_g000001 Rmu_sc0003570.1_g000001 Rmu_sc0004296.1_g000005 Rmu_sc0004296.1_g000014 Rmu_sc0005592.1_g000025
rosa_roxburghii	Rroxscaffold_176G00431160 Rroxscaffold_176G00431170 Rroxscaffold_2G00148990 Rroxscaffold_2G00149040 Rroxscaffold_3G00271070 Rroxscaffold_6G00409880 Rroxscaffold_7G00204020 Rroxscaffold_7G00204040 Rroxscaffold_7G00204070
rosa_rugosa	Rorug02G0027100 Rorug02G0027200 Rorug02G0027300 Rorug05G0421000 Rorug06G0449100
rosa_samantha	Rh2AG072900 Rh2AG073200 Rh2BG073500 Rh2BG074100 Rh2CG074700 Rh2DG071600 Rh2DG072300 Rh5AG478000 Rh5BG498700 Rh5DG510800 Rh6AG125300 Rh6BG121400 Rh6CG119800 Rh7AG052900 Rh7BG052500 Rh7CG054000 Rh7DG052300
rosa_wichuraiana	Rw0G005280 Rw2G005970 Rw2G006000 Rw5G044390 Rw6G010890 Rw7G004310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2183
AccB7I	CCANNNNNTGG	2 cut(s)	2135, 2995
AccBSI	CCGCTC	1 cut(s)	655
AccII	CGCG	2 cut(s)	801, 1242
AciI	CCGC	5 cut(s)	655, 1240, 1750, 2471, 3068
AclI	AACGTT	1 cut(s)	385
AclWI	GGATC	6 cut(s)	1017, 1101, 1665, 2087, 2480, 2908
AcoI	YGGCCR	1 cut(s)	165
AcsI	RAATTY	6 cut(s)	146, 471, 1037, 1737, 1998, 2632
AcuI	CTGAAG	5 cut(s)	41, 207, 807, 2403, 3104
AdeI	CACNNNGTG	1 cut(s)	2423
AfaI	GTAC	7 cut(s)	86, 875, 893, 2280, 2289, 2525, 3000
AfiI	CCNNNNNNNGG	8 cut(s)	2076, 2135, 2596, 2782, 2951, 2952, 2995, 3085
AhlI	ACTAGT	1 cut(s)	1627
AjnI	CCWGG	8 cut(s)	342, 359, 1203, 1741, 1846, 2098, 2215, 2400
Alw21I	GWGCWC	2 cut(s)	1376, 3139
Alw26I	GTCTC	6 cut(s)	448, 2690, 2766, 2821, 2831, 3016
Alw44I	GTGCAC	2 cut(s)	1372, 3135
AlwI	GGATC	6 cut(s)	1017, 1101, 1665, 2087, 2480, 2908
AlwNI	CAGNNNCTG	1 cut(s)	1790
AoxI	GGCC	4 cut(s)	165, 1188, 1587, 2850
ApaLI	GTGCAC	2 cut(s)	1372, 3135
ApeKI	GCWGC	7 cut(s)	257, 575, 1394, 1409, 1805, 1987, 2555
ApoI	RAATTY	6 cut(s)	146, 471, 1037, 1737, 1998, 2632
Asp700I	GAANNNNTTC	2 cut(s)	386, 682
AspS9I	GGNCC	4 cut(s)	955, 1588, 2213, 2368
AsuC2I	CCSGG	1 cut(s)	2644
AvaII	GGWCC	3 cut(s)	955, 2213, 2368
BaeGI	GKGCMC	4 cut(s)	210, 1376, 1449, 3139
BaeI	ACNNNNGTAYC	2 cut(s)	15, 48
BauI	CACGAG	1 cut(s)	1448
BbsI	GAAGAC	3 cut(s)	29, 195, 287
Bbv12I	GWGCWC	2 cut(s)	1376, 3139
BbvI	GCAGC	7 cut(s)	244, 587, 1381, 1396, 1817, 1974, 2542
BceAI	ACGGC	1 cut(s)	1203
BcgI	CGANNNNNNTGC	2 cut(s)	158, 192
BciT130I	CCWGG	8 cut(s)	344, 361, 1205, 1743, 1848, 2100, 2217, 2402
BciVI	GTATCC	5 cut(s)	43, 562, 856, 1340, 1764
BclI	TGATCA	1 cut(s)	523
BcnI	CCSGG	1 cut(s)	2644
BcoDI	GTCTC	6 cut(s)	448, 2690, 2766, 2821, 2831, 3016
BcuI	ACTAGT	1 cut(s)	1627
BfaI	CTAG	4 cut(s)	1628, 1928, 2153, 2760
BfmI	CTRYAG	1 cut(s)	949
BfuAI	ACCTGC	1 cut(s)	2183
BfuI	GTATCC	5 cut(s)	43, 562, 856, 1340, 1764
BglII	AGATCT	2 cut(s)	332, 1552
BisI	GCNGC	7 cut(s)	258, 576, 1395, 1410, 1806, 1988, 2556
BlpI	GCTNAGC	1 cut(s)	1944
BlsI	GCNGC	7 cut(s)	259, 577, 1396, 1411, 1807, 1989, 2557
Bme1390I	CCNGG	9 cut(s)	344, 361, 1205, 1743, 1848, 2100, 2217, 2402, 2644
Bme18I	GGWCC	3 cut(s)	955, 2213, 2368
BmgT120I	GGNCC	4 cut(s)	955, 1588, 2213, 2368
BmiI	GGNNCC	2 cut(s)	956, 2370
BmrFI	CCNGG	9 cut(s)	344, 361, 1205, 1743, 1848, 2100, 2217, 2402, 2644
BmrI	ACTGGG	1 cut(s)	2707
BmsI	GCATC	7 cut(s)	289, 870, 877, 1124, 1681, 1792, 2183
BmuI	ACTGGG	1 cut(s)	2707
BoxI	GACNNNNGTC	1 cut(s)	2453
BpiI	GAAGAC	3 cut(s)	29, 195, 287
BplI	GAGNNNNNCTC	2 cut(s)	2801, 2833
BpmI	CTGGAG	2 cut(s)	1187, 1869
Bpu10I	CCTNAGC	1 cut(s)	2950
Bpu1102I	GCTNAGC	1 cut(s)	1944
BpuEI	CTTGAG	7 cut(s)	424, 686, 1190, 1407, 1660, 2657, 2801
BpuMI	CCSGG	1 cut(s)	2644
BsaBI	GATNNNNATC	1 cut(s)	1074
BsaI	GGTCTC	4 cut(s)	2690, 2766, 2821, 2831
BsaWI	WCCGGW	2 cut(s)	1654, 2229
Bsc4I	CCNNNNNNNGG	8 cut(s)	2076, 2135, 2596, 2782, 2951, 2952, 2995, 3085
Bse118I	RCCGGY	1 cut(s)	118
Bse1I	ACTGG	5 cut(s)	1303, 1876, 2140, 2215, 2713
Bse3DI	GCAATG	6 cut(s)	649, 2147, 2187, 2550, 2661, 2666
Bse8I	GATNNNNATC	1 cut(s)	1074
BseBI	CCWGG	8 cut(s)	344, 361, 1205, 1743, 1848, 2100, 2217, 2402
BseJI	GATNNNNATC	1 cut(s)	1074
BseLI	CCNNNNNNNGG	8 cut(s)	2076, 2135, 2596, 2782, 2951, 2952, 2995, 3085
BseMI	GCAATG	6 cut(s)	649, 2147, 2187, 2550, 2661, 2666
BseNI	ACTGG	5 cut(s)	1303, 1876, 2140, 2215, 2713
BseRI	GAGGAG	4 cut(s)	638, 914, 2364, 2758
BseSI	GKGCMC	4 cut(s)	210, 1376, 1449, 3139
BseX3I	CGGCCG	1 cut(s)	165
BseXI	GCAGC	7 cut(s)	244, 587, 1381, 1396, 1817, 1974, 2542
BseYI	CCCAGC	2 cut(s)	965, 2945
BsgI	GTGCAG	1 cut(s)	1803
Bsh1236I	CGCG	2 cut(s)	801, 1242
Bsh1285I	CGRYCG	1 cut(s)	168
BshFI	GGCC	4 cut(s)	167, 1190, 1589, 2852
BsiEI	CGRYCG	1 cut(s)	168
BsiHKAI	GWGCWC	2 cut(s)	1376, 3139
BsiSI	CCGG	5 cut(s)	119, 1655, 2230, 2643, 3044
BsiWI	CGTACG	1 cut(s)	891
BslFI	GGGAC	5 cut(s)	968, 1944, 1945, 2577, 2799
BslI	CCNNNNNNNGG	8 cut(s)	2076, 2135, 2596, 2782, 2951, 2952, 2995, 3085
BsmAI	GTCTC	6 cut(s)	448, 2690, 2766, 2821, 2831, 3016
BsmBI	CGTCTC	1 cut(s)	448
BsmFI	GGGAC	5 cut(s)	968, 1944, 1945, 2577, 2799
BsmI	GAATGC	1 cut(s)	1527
BsnI	GGCC	4 cut(s)	167, 1190, 1589, 2852
Bso31I	GGTCTC	4 cut(s)	2690, 2766, 2821, 2831
Bsp1286I	GDGCHC	4 cut(s)	210, 1376, 1449, 3139
Bsp1720I	GCTNAGC	1 cut(s)	1944
Bsp68I	TCGCGA	1 cut(s)	801
BspACI	CCGC	5 cut(s)	655, 1240, 1750, 2471, 3068
BspANI	GGCC	4 cut(s)	167, 1190, 1589, 2852
BspFNI	CGCG	2 cut(s)	801, 1242
BspHI	TCATGA	2 cut(s)	1336, 2341
BspLI	GGNNCC	2 cut(s)	956, 2370
BspMI	ACCTGC	1 cut(s)	2183
BspPI	GGATC	6 cut(s)	1017, 1101, 1665, 2087, 2480, 2908
BspQI	GCTCTTC	1 cut(s)	2321
BspTNI	GGTCTC	4 cut(s)	2690, 2766, 2821, 2831
BsrBI	CCGCTC	1 cut(s)	655
BsrDI	GCAATG	6 cut(s)	649, 2147, 2187, 2550, 2661, 2666
BsrFI	RCCGGY	1 cut(s)	118
BsrI	ACTGG	5 cut(s)	1303, 1876, 2140, 2215, 2713
BssAI	RCCGGY	1 cut(s)	118
BssSI	CACGAG	1 cut(s)	1448
BssT1I	CCWWGG	5 cut(s)	1540, 2129, 2332, 2595, 3009
Bst2BI	CACGAG	1 cut(s)	1448
Bst2UI	CCWGG	8 cut(s)	344, 361, 1205, 1743, 1848, 2100, 2217, 2402
Bst4CI	ACNGT	8 cut(s)	76, 1498, 1568, 2278, 2409, 2591, 2914, 2932
Bst6I	CTCTTC	7 cut(s)	166, 444, 615, 701, 836, 1875, 2321
BstAPI	GCANNNNNTGC	1 cut(s)	2423
BstC8I	GCNNGC	4 cut(s)	137, 1992, 2757, 3135
BstDSI	CCRYGG	1 cut(s)	3121
BstFNI	CGCG	2 cut(s)	801, 1242
BstMAI	GTCTC	6 cut(s)	448, 2690, 2766, 2821, 2831, 3016
BstMCI	CGRYCG	1 cut(s)	168
BstMWI	GCNNNNNNNGC	5 cut(s)	547, 1187, 1787, 2423, 2621
BstNI	CCWGG	8 cut(s)	344, 361, 1205, 1743, 1848, 2100, 2217, 2402
BstPAI	GACNNNNGTC	1 cut(s)	2453
BstSCI	CCNGG	9 cut(s)	342, 359, 1203, 1741, 1846, 2098, 2215, 2400, 2642
BstSFI	CTRYAG	1 cut(s)	949
BstSLI	GKGCMC	4 cut(s)	210, 1376, 1449, 3139
BstUI	CGCG	2 cut(s)	801, 1242
BstV1I	GCAGC	7 cut(s)	244, 587, 1381, 1396, 1817, 1974, 2542
BstV2I	GAAGAC	3 cut(s)	29, 195, 287
BstX2I	RGATCY	4 cut(s)	332, 1552, 1657, 2900
BstYI	RGATCY	4 cut(s)	332, 1552, 1657, 2900
BstZI	CGGCCG	1 cut(s)	165
BsuI	GTATCC	5 cut(s)	43, 562, 856, 1340, 1764
BsuRI	GGCC	4 cut(s)	167, 1190, 1589, 2852
BtgI	CCRYGG	1 cut(s)	3121
BtgZI	GCGATG	1 cut(s)	275
BtsI	GCAGTG	1 cut(s)	1815
BtuMI	TCGCGA	1 cut(s)	801
BveI	ACCTGC	1 cut(s)	2183
Cac8I	GCNNGC	4 cut(s)	137, 1992, 2757, 3135
CaiI	CAGNNNCTG	1 cut(s)	1790
CciI	TCATGA	2 cut(s)	1336, 2341
Cfr10I	RCCGGY	1 cut(s)	118
Cfr13I	GGNCC	4 cut(s)	955, 1588, 2213, 2368
Csp6I	GTAC	7 cut(s)	85, 874, 892, 2279, 2288, 2524, 2999
CviQI	GTAC	7 cut(s)	85, 874, 892, 2279, 2288, 2524, 2999
DraIII	CACNNNGTG	1 cut(s)	2423
EaeI	YGGCCR	1 cut(s)	165
EagI	CGGCCG	1 cut(s)	165
Eam1104I	CTCTTC	7 cut(s)	166, 444, 615, 701, 836, 1875, 2321
EarI	CTCTTC	7 cut(s)	166, 444, 615, 701, 836, 1875, 2321
EciI	GGCGGA	1 cut(s)	2486
EclXI	CGGCCG	1 cut(s)	165
Eco130I	CCWWGG	5 cut(s)	1540, 2129, 2332, 2595, 3009
Eco31I	GGTCTC	4 cut(s)	2690, 2766, 2821, 2831
Eco47I	GGWCC	3 cut(s)	955, 2213, 2368
Eco52I	CGGCCG	1 cut(s)	165
Eco57I	CTGAAG	5 cut(s)	41, 207, 807, 2403, 3104
EcoO109I	RGGNCCY	1 cut(s)	955
EcoRII	CCWGG	8 cut(s)	342, 359, 1203, 1741, 1846, 2098, 2215, 2400
EcoT14I	CCWWGG	5 cut(s)	1540, 2129, 2332, 2595, 3009
EcoT22I	ATGCAT	1 cut(s)	649
ErhI	CCWWGG	5 cut(s)	1540, 2129, 2332, 2595, 3009
Esp3I	CGTCTC	1 cut(s)	448
FalI	AAGNNNNNCTT	2 cut(s)	386, 418
FaqI	GGGAC	5 cut(s)	968, 1944, 1945, 2577, 2799
FbaI	TGATCA	1 cut(s)	523
Fnu4HI	GCNGC	7 cut(s)	258, 576, 1395, 1410, 1806, 1988, 2556
Fsp4HI	GCNGC	7 cut(s)	258, 576, 1395, 1410, 1806, 1988, 2556
FspBI	CTAG	4 cut(s)	1628, 1928, 2153, 2760
GluI	GCNGC	7 cut(s)	258, 576, 1395, 1410, 1806, 1988, 2556
GsaI	CCCAGC	2 cut(s)	969, 2949
GsuI	CTGGAG	2 cut(s)	1187, 1869
HaeIII	GGCC	4 cut(s)	167, 1190, 1589, 2852
HapII	CCGG	5 cut(s)	119, 1655, 2230, 2643, 3044
HincII	GTYRAC	3 cut(s)	591, 2067, 2448
HindII	GTYRAC	3 cut(s)	591, 2067, 2448
HindIII	AAGCTT	3 cut(s)	137, 999, 2885
HpaI	GTTAAC	1 cut(s)	591
HpaII	CCGG	5 cut(s)	119, 1655, 2230, 2643, 3044
Hpy166II	GTNNAC	7 cut(s)	591, 1374, 1547, 1582, 2067, 2448, 3137
Hpy8I	GTNNAC	7 cut(s)	591, 1374, 1547, 1582, 2067, 2448, 3137
Hpy99I	CGWCG	1 cut(s)	1389
HpyAV	CCTTC	7 cut(s)	391, 1171, 2023, 2457, 2842, 3079, 3122
HpyCH4III	ACNGT	8 cut(s)	76, 1498, 1568, 2278, 2409, 2591, 2914, 2932
HpyCH4IV	ACGT	5 cut(s)	50, 385, 2321, 2626, 2649
HpyF10VI	GCNNNNNNNGC	5 cut(s)	547, 1187, 1787, 2423, 2621
HpySE526I	ACGT	5 cut(s)	50, 385, 2321, 2626, 2649
Ksp22I	TGATCA	1 cut(s)	523
KspAI	GTTAAC	1 cut(s)	591
LguI	GCTCTTC	1 cut(s)	2321
LmnI	GCTCC	9 cut(s)	6, 538, 547, 652, 712, 1206, 1729, 2745, 3070
Lsp1109I	GCAGC	7 cut(s)	244, 587, 1381, 1396, 1817, 1974, 2542
LweI	GCATC	7 cut(s)	289, 870, 877, 1124, 1681, 1792, 2183
MaeI	CTAG	4 cut(s)	1628, 1928, 2153, 2760
MaeII	ACGT	5 cut(s)	50, 385, 2321, 2626, 2649
MaeIII	GTNAC	7 cut(s)	809, 1164, 1562, 1813, 1834, 2155, 3028
MbiI	CCGCTC	1 cut(s)	655
MfeI	CAATTG	3 cut(s)	542, 1247, 1809
MflI	RGATCY	4 cut(s)	332, 1552, 1657, 2900
MhlI	GDGCHC	4 cut(s)	210, 1376, 1449, 3139
MlyI	GAGTC	7 cut(s)	365, 365, 415, 509, 1181, 2153, 2781
Mph1103I	ATGCAT	1 cut(s)	649
MroXI	GAANNNNTTC	2 cut(s)	386, 682
MseI	TTAA	8 cut(s)	98, 462, 590, 605, 674, 912, 2429, 3038
MspA1I	CMGCKG	1 cut(s)	3082
MspI	CCGG	5 cut(s)	119, 1655, 2230, 2643, 3044
MspR9I	CCNGG	9 cut(s)	344, 361, 1205, 1743, 1848, 2100, 2217, 2402, 2644
MunI	CAATTG	3 cut(s)	542, 1247, 1809
Mva1269I	GAATGC	1 cut(s)	1527
MvaI	CCWGG	8 cut(s)	344, 361, 1205, 1743, 1848, 2100, 2217, 2402
MvnI	CGCG	2 cut(s)	801, 1242
MwoI	GCNNNNNNNGC	5 cut(s)	547, 1187, 1787, 2423, 2621
NciI	CCSGG	1 cut(s)	2644
NlaIV	GGNNCC	2 cut(s)	956, 2370
NmuCI	GTSAC	2 cut(s)	1813, 1834
NruI	TCGCGA	1 cut(s)	801
NsiI	ATGCAT	1 cut(s)	649
PagI	TCATGA	2 cut(s)	1336, 2341
PasI	CCCWGGG	1 cut(s)	2099
PciSI	GCTCTTC	1 cut(s)	2321
PcsI	WCGNNNNNNNCGW	2 cut(s)	324, 2203
PctI	GAATGC	1 cut(s)	1527
PdmI	GAANNNNTTC	2 cut(s)	386, 682
PfeI	GAWTC	3 cut(s)	218, 229, 1718
Pfl23II	CGTACG	1 cut(s)	891
PflMI	CCANNNNNTGG	2 cut(s)	2135, 2995
PfoI	TCCNGGA	3 cut(s)	359, 1203, 2215
PkrI	GCNGC	7 cut(s)	259, 577, 1396, 1411, 1807, 1989, 2557
PleI	GAGTC	7 cut(s)	364, 365, 414, 508, 1180, 2152, 2781
PpsI	GAGTC	7 cut(s)	364, 365, 414, 508, 1180, 2152, 2781
PpuMI	RGGWCCY	1 cut(s)	955
PshAI	GACNNNNGTC	1 cut(s)	2453
Psp1406I	AACGTT	1 cut(s)	385
Psp5II	RGGWCCY	1 cut(s)	955
Psp6I	CCWGG	8 cut(s)	342, 359, 1203, 1741, 1846, 2098, 2215, 2400
PspFI	CCCAGC	2 cut(s)	965, 2945
PspGI	CCWGG	8 cut(s)	342, 359, 1203, 1741, 1846, 2098, 2215, 2400
PspLI	CGTACG	1 cut(s)	891
PspN4I	GGNNCC	2 cut(s)	956, 2370
PspPI	GGNCC	4 cut(s)	955, 1588, 2213, 2368
PspPPI	RGGWCCY	1 cut(s)	955
PstNI	CAGNNNCTG	1 cut(s)	1790
PsuI	RGATCY	4 cut(s)	332, 1552, 1657, 2900
PvuII	CAGCTG	1 cut(s)	3082
RruI	TCGCGA	1 cut(s)	801
RsaI	GTAC	7 cut(s)	86, 875, 893, 2280, 2289, 2525, 3000
RsaNI	GTAC	7 cut(s)	85, 874, 892, 2279, 2288, 2524, 2999
SapI	GCTCTTC	1 cut(s)	2321
SaqAI	TTAA	8 cut(s)	98, 462, 590, 605, 674, 912, 2429, 3038
SatI	GCNGC	7 cut(s)	258, 576, 1395, 1410, 1806, 1988, 2556
Sau96I	GGNCC	4 cut(s)	955, 1588, 2213, 2368
SchI	GAGTC	7 cut(s)	365, 365, 415, 509, 1181, 2153, 2781
ScrFI	CCNGG	9 cut(s)	344, 361, 1205, 1743, 1848, 2100, 2217, 2402, 2644
SduI	GDGCHC	4 cut(s)	210, 1376, 1449, 3139
SfaNI	GCATC	7 cut(s)	289, 870, 877, 1124, 1681, 1792, 2183
SfcI	CTRYAG	1 cut(s)	949
SinI	GGWCC	3 cut(s)	955, 2213, 2368
SmlI	CTYRAG	7 cut(s)	403, 701, 1169, 1422, 1675, 2672, 2780
SmoI	CTYRAG	7 cut(s)	403, 701, 1169, 1422, 1675, 2672, 2780
SpeI	ACTAGT	1 cut(s)	1627
SsiI	CCGC	5 cut(s)	655, 1240, 1750, 2471, 3068
SspI	AATATT	1 cut(s)	1905
SspMI	CTAG	4 cut(s)	1628, 1928, 2153, 2760
StyD4I	CCNGG	9 cut(s)	342, 359, 1203, 1741, 1846, 2098, 2215, 2400, 2642
StyI	CCWWGG	5 cut(s)	1540, 2129, 2332, 2595, 3009
TaaI	ACNGT	8 cut(s)	76, 1498, 1568, 2278, 2409, 2591, 2914, 2932
TaiI	ACGT	5 cut(s)	53, 388, 2324, 2629, 2652
TaqI	TCGA	5 cut(s)	1175, 1607, 1645, 2197, 2206
TatI	WGTACW	4 cut(s)	84, 873, 2287, 2523
TfiI	GAWTC	3 cut(s)	218, 229, 1718
Tru1I	TTAA	8 cut(s)	98, 462, 590, 605, 674, 912, 2429, 3038
Tru9I	TTAA	8 cut(s)	98, 462, 590, 605, 674, 912, 2429, 3038
TseFI	GTSAC	2 cut(s)	1813, 1834
TseI	GCWGC	7 cut(s)	257, 575, 1394, 1409, 1805, 1987, 2555
Tsp45I	GTSAC	2 cut(s)	1813, 1834
Van91I	CCANNNNNTGG	2 cut(s)	2135, 2995
VneI	GTGCAC	2 cut(s)	1372, 3135
VpaK11BI	GGWCC	3 cut(s)	955, 2213, 2368
XapI	RAATTY	6 cut(s)	146, 471, 1037, 1737, 1998, 2632
XmnI	GAANNNNTTC	2 cut(s)	386, 682
XspI	CTAG	4 cut(s)	1628, 1928, 2153, 2760
Zsp2I	ATGCAT	1 cut(s)	649

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.