MD12G1074500.v1.1

quinone oxidoreductase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Reverse (-)
8959128 .. 8961567
2440 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1074500.v1.1.491

Sequence Viewer

Length: 978 bp
ATGAAGGCTATAGTGGTGAGCGCTCCAGGTGGACCGGAGGTCCTCCAACTACAAGAAGTTGAAGACCCAGAGTTCAAACACGATGAGGTCCTAATAAAAGTTGAGGCCACAGCCCTGAACCGAGCTGATATCCTTCAGAGGAAGGGCCTGTACCCACCACCCCCAGGTTCCAGCCCTTACCTGGGTCTCGAATGTTCTGGAACCGTAGTGGCTGTTGGGAAACACGTCTCACGCTGGCAGGTCGGTGAGAAGGTGTGTGCTCTGCTTACTGGAGGAGGGTATGCTGAGAAGGTGGCTGTTCCAGCTGGACAAGTACTTCCTGCTCCACCTGGTGTTTCTTTGAAGGATGCTGCTAGTTTTCCTGAAGTTTCGTGCACTGTTTGGTCAACTGTTTTTATGATGAGCCGGCTATCTGCTGGCGAAACGTTTTTGGTTCATGGCGGATCAAGCGGAATTGGTACGTTTGCAATTCAGATAGCTAAATACCTGGGAGCAAAGGTGTTTATCACAGCTGGAAGTGAAGAAAAGTTAGCTTTTTGCAAGGATCTTGGAGCTGATGTGTGTATCAATTACAAGACAGAGGACTTTGTTGCGCGGGTGAAGGAAGAAACTGGTGGCAAAGGCGTGGATGTCATCCTGGATATCATTGGGGCAAACTATTTCCGTCGAAACCTTGACAGTTTAAGCTTTGATGGGAGGCTTTTTGTGATCGCGACCATGGGCGGTGCTGTAACAGAGCTAGATCTTCGTGTTGTACTTTCAAAGCGCCTGACCATCCAGGCAGCAGGTTTGAGATACAGAAGTCCAGAAAACAAAGCAGCGATTGTTAGGGAGGTGGAGAGCAATGTGTGGCCTGCAATCGCGTCTGGCAAGGTGAAACCGGTGGTTTACAAATGTTTTCCGTTATATGAAGCGGCAGAAGCTCACCGGCTGATGGAAAGTAGCAAGCATATCGGAAAGATACTGCTTGTTCCGTGA

Protein Analysis

326

Amino Acids

34.79

Weight (kDa)

7.59

Isoelectric Point (pI)

44.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 27 - 109 5e-17 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N PF00107 151 - 266 3.9e-31 Zinc-binding dehydrogenase
ADH_zinc_N_2 PF13602 183 - 323 1.4e-25 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000394)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21580
fragaria_vesca FvH4_3g02190 FvH4_3g02190 FvH4_3g02190 FvH4_3g04320 FvH4_3g04340 FvH4_3g18080 FvH4_3g18080 FvH4_3g18080 FvH4_6g30490 FvH4_6g30490 FvH4_6g30490 FvH4_6g30490
malus_domestica MD05G1217800.v1.1 MD05G1323900.v1.1 MD12G1074500.v1.1 MD14G1066500.v1.1
prunus_persica Prupe.4G038700_v2.0.a1 Prupe.7G059000_v2.0.a1 Prupe.7G059000_v2.0.a1 Prupe.7G059300_v2.0.a1 Prupe.7G059300_v2.0.a1 Prupe.7G059300_v2.0.a1 Prupe.7G059300_v2.0.a1
pyrus_communis pycom05g29820
rosa_chinensis RchiOBHm_Chr1g0318171 RchiOBHm_Chr5g0003241 RchiOBHm_Chr5g0006701 RchiOBHm_Chr5g0006721 RchiOBHm_Chr5g0006731 RchiOBHm_Chr5g0030211 RchiOBHm_Chr5g0030291 RchiOBHm_Chr5g0030331 RchiOBHm_Chr5g0030371 RchiOBHm_Chr5g0030401 RchiOBHm_Chr5g0030471
rosa_laevigata RLG00000025923 RLG00000025924 RLG00000030556 RLG00000031088 RLG00000031336 RLG00000031418 RLG00000031420 RLG00000031421 RLG00000031422 RLG00000031423 RLG00000033220
rosa_multiflora Rmu_sc0001886.1_g000010 Rmu_sc0001886.1_g000011 Rmu_sc0001886.1_g000012 Rmu_sc0010917.1_g000018 Rmu_sc0011424.1_g000013 Rmu_sc0017347.1_g000003 Rmu_sc0017347.1_g000005 Rmu_sc0018387.1_g000006 Rmu_sc0018387.1_g000008
rosa_roxburghii Rroxscaffold_1G00049810 Rroxscaffold_1G00069320 Rroxscaffold_1G00072770 Rroxscaffold_4G00329990 Rroxscaffold_6G00426520
rosa_rugosa Rorug01G0019200 Rorug01G0019300 Rorug01G0019400 Rorug02G0611300 Rorug02G0611400 Rorug04G0401400 Rorug04G0423700 Rorug04G0424000 Rorug05G0118000
rosa_samantha Rh1CG030000 Rh1DG040100 Rh2DG133300 Rh3AG010300 Rh3BG010000 Rh3DG010500 Rh5AG026800 Rh5AG026900 Rh5AG027800 Rh5AG051600 Rh5AG051800 Rh5BG028000 Rh5BG050700 Rh5BG129800 Rh5BG129900 Rh5CG029400 Rh5CG029500 Rh5CG030100 Rh5CG059100 Rh5CG059300 Rh5CG059400 Rh5DG026200 Rh5DG049800 Rh5DG049900 Rh5DG214000
rosa_wichuraiana Rw1G002510 Rw5G002450 Rw5G002640 Rw5G004650 Rw5G005260 Rw5G005270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 229, 776
AccII CGCG 3 cut(s) 595, 713, 863
AciI CCGC 5 cut(s) 441, 450, 595, 723, 914
AclI AACGTT 1 cut(s) 425
AclWI GGATC 2 cut(s) 451, 552
AcuI CTGAAG 2 cut(s) 119, 384
AdeI CACNNNGTG 1 cut(s) 332
AfaI GTAC 4 cut(s) 152, 315, 460, 756
AfeI AGCGCT 1 cut(s) 22
AfiI CCNNNNNNNGG 4 cut(s) 164, 181, 182, 934
AflIII ACRYGT 1 cut(s) 223
AgeI ACCGGT 1 cut(s) 880
AgsI TTSAA 4 cut(s) 62, 76, 343, 762
AhdI GACNNNNNGTC 1 cut(s) 38
AjiI CACGTC 1 cut(s) 226
AjnI CCWGG 7 cut(s) 25, 163, 180, 328, 486, 636, 777
AluBI AGCT 9 cut(s) 125, 305, 479, 512, 533, 554, 687, 739, 923
AluI AGCT 9 cut(s) 125, 305, 479, 512, 533, 554, 687, 739, 923
Alw21I GWGCWC 2 cut(s) 262, 377
Alw26I GTCTC 2 cut(s) 191, 232
Alw44I GTGCAC 1 cut(s) 373
AlwI GGATC 2 cut(s) 451, 552
Aor51HI AGCGCT 1 cut(s) 22
AoxI GGCC 3 cut(s) 105, 145, 851
ApaLI GTGCAC 1 cut(s) 373
ApeKI GCWGC 3 cut(s) 350, 782, 818
AsiGI ACCGGT 1 cut(s) 880
AspLEI GCGC 3 cut(s) 23, 595, 768
AspS9I GGNCC 4 cut(s) 32, 40, 88, 145
AsuHPI GGTGA 5 cut(s) 28, 257, 610, 886, 917
AvaII GGWCC 3 cut(s) 32, 40, 88
BaeGI GKGCMC 1 cut(s) 377
BaeI ACNNNNGTAYC 2 cut(s) 787, 820
BarI GAAGNNNNNNTAC 2 cut(s) 134, 166
BbsI GAAGAC 1 cut(s) 69
Bbv12I GWGCWC 2 cut(s) 262, 377
BbvI GCAGC 3 cut(s) 337, 794, 830
BccI CCATC 3 cut(s) 686, 782, 928
BcgI CGANNNNNNTGC 2 cut(s) 934, 968
BciT130I CCWGG 7 cut(s) 27, 165, 182, 330, 488, 638, 779
BcoDI GTCTC 2 cut(s) 191, 232
BfaI CTAG 2 cut(s) 354, 740
BfmI CTRYAG 1 cut(s) 9
BfoI RGCGCY 2 cut(s) 24, 769
BfuAI ACCTGC 2 cut(s) 229, 776
BglII AGATCT 1 cut(s) 742
BisI GCNGC 4 cut(s) 351, 783, 819, 915
BlsI GCNGC 4 cut(s) 352, 784, 820, 916
BmcAI AGTACT 1 cut(s) 315
Bme1390I CCNGG 7 cut(s) 27, 165, 182, 330, 488, 638, 779
Bme18I GGWCC 3 cut(s) 32, 40, 88
BmeRI GACNNNNNGTC 1 cut(s) 38
BmgBI CACGTC 1 cut(s) 226
BmgT120I GGNCC 4 cut(s) 32, 40, 88, 145
BmiI GGNNCC 2 cut(s) 169, 202
BmrFI CCNGG 7 cut(s) 27, 165, 182, 330, 488, 638, 779
BmsI GCATC 1 cut(s) 337
BpiI GAAGAC 1 cut(s) 69
BpmI CTGGAG 2 cut(s) 9, 291
BsaI GGTCTC 1 cut(s) 191
BsaJI CCNNGG 4 cut(s) 163, 181, 487, 717
BsaWI WCCGGW 2 cut(s) 34, 880
BsaXI ACNNNNNCTCC 4 cut(s) 483, 513, 543, 573
Bsc4I CCNNNNNNNGG 4 cut(s) 164, 181, 182, 934
Bse118I RCCGGY 3 cut(s) 405, 880, 927
Bse1I ACTGG 2 cut(s) 274, 616
Bse3DI GCAATG 1 cut(s) 850
BseBI CCWGG 7 cut(s) 27, 165, 182, 330, 488, 638, 779
BseDI CCNNGG 4 cut(s) 163, 181, 487, 717
BseGI GGATG 4 cut(s) 352, 633, 634, 774
BseLI CCNNNNNNNGG 4 cut(s) 164, 181, 182, 934
BseMI GCAATG 1 cut(s) 850
BseMII CTCAG 1 cut(s) 276
BseNI ACTGG 2 cut(s) 274, 616
BseRI GAGGAG 1 cut(s) 288
BseSI GKGCMC 1 cut(s) 377
BseXI GCAGC 3 cut(s) 337, 794, 830
Bsh1236I CGCG 3 cut(s) 595, 713, 863
BshFI GGCC 3 cut(s) 107, 147, 853
BshTI ACCGGT 1 cut(s) 880
BsiHKAI GWGCWC 2 cut(s) 262, 377
BsiSI CCGG 4 cut(s) 35, 406, 881, 928
BslI CCNNNNNNNGG 4 cut(s) 164, 181, 182, 934
BsmAI GTCTC 2 cut(s) 191, 232
BsmBI CGTCTC 1 cut(s) 232
BsnI GGCC 3 cut(s) 107, 147, 853
Bso31I GGTCTC 1 cut(s) 191
Bsp1286I GDGCHC 2 cut(s) 262, 377
Bsp143I GATC 4 cut(s) 443, 544, 708, 742
Bsp19I CCATGG 1 cut(s) 717
Bsp68I TCGCGA 1 cut(s) 713
BspACI CCGC 5 cut(s) 441, 450, 595, 723, 914
BspANI GGCC 3 cut(s) 107, 147, 853
BspCNI CTCAG 1 cut(s) 277
BspFNI CGCG 3 cut(s) 595, 713, 863
BspLI GGNNCC 2 cut(s) 169, 202
BspMI ACCTGC 2 cut(s) 229, 776
BspPI GGATC 2 cut(s) 451, 552
BspTNI GGTCTC 1 cut(s) 191
BsrDI GCAATG 1 cut(s) 850
BsrFI RCCGGY 3 cut(s) 405, 880, 927
BsrI ACTGG 2 cut(s) 274, 616
BssAI RCCGGY 3 cut(s) 405, 880, 927
BssECI CCNNGG 4 cut(s) 163, 181, 487, 717
BssMI GATC 4 cut(s) 443, 544, 708, 742
BssT1I CCWWGG 1 cut(s) 717
Bst2UI CCWGG 7 cut(s) 27, 165, 182, 330, 488, 638, 779
Bst4CI ACNGT 4 cut(s) 205, 379, 391, 680
BstC8I GCNNGC 5 cut(s) 236, 407, 418, 855, 947
BstDEI CTNAG 1 cut(s) 285
BstDSI CCRYGG 1 cut(s) 717
BstF5I GGATG 4 cut(s) 352, 633, 634, 774
BstFNI CGCG 3 cut(s) 595, 713, 863
BstH2I RGCGCY 2 cut(s) 24, 769
BstHHI GCGC 3 cut(s) 23, 595, 768
BstKTI GATC 4 cut(s) 446, 547, 711, 745
BstMAI GTCTC 2 cut(s) 191, 232
BstMBI GATC 4 cut(s) 443, 544, 708, 742
BstMWI GCNNNNNNNGC 3 cut(s) 302, 447, 920
BstNI CCWGG 7 cut(s) 27, 165, 182, 330, 488, 638, 779
BstSCI CCNGG 7 cut(s) 25, 163, 180, 328, 486, 636, 777
BstSFI CTRYAG 1 cut(s) 9
BstSLI GKGCMC 1 cut(s) 377
BstUI CGCG 3 cut(s) 595, 713, 863
BstV1I GCAGC 3 cut(s) 337, 794, 830
BstV2I GAAGAC 1 cut(s) 69
BstX2I RGATCY 2 cut(s) 544, 742
BstYI RGATCY 2 cut(s) 544, 742
BsuRI GGCC 3 cut(s) 107, 147, 853
BtgI CCRYGG 1 cut(s) 717
BtrI CACGTC 1 cut(s) 226
BtsCI GGATG 4 cut(s) 352, 633, 634, 774
BtsIMutI CAGTG 1 cut(s) 375
BtuMI TCGCGA 1 cut(s) 713
BveI ACCTGC 2 cut(s) 229, 776
Cac8I GCNNGC 5 cut(s) 236, 407, 418, 855, 947
CfoI GCGC 3 cut(s) 23, 595, 768
Cfr10I RCCGGY 3 cut(s) 405, 880, 927
Cfr13I GGNCC 4 cut(s) 32, 40, 88, 145
CseI GACGC 1 cut(s) 852
CsiI ACCWGGT 1 cut(s) 328
Csp6I GTAC 4 cut(s) 151, 314, 459, 755
CspAI ACCGGT 1 cut(s) 880
CviAII CATG 2 cut(s) 437, 718
CviQI GTAC 4 cut(s) 151, 314, 459, 755
DdeI CTNAG 1 cut(s) 285
DpnI GATC 4 cut(s) 445, 546, 710, 744
DpnII GATC 4 cut(s) 443, 544, 708, 742
DraIII CACNNNGTG 1 cut(s) 332
DriI GACNNNNNGTC 1 cut(s) 38
Eam1105I GACNNNNNGTC 1 cut(s) 38
EciI GGCGGA 1 cut(s) 456
Eco130I CCWWGG 1 cut(s) 717
Eco31I GGTCTC 1 cut(s) 191
Eco32I GATATC 2 cut(s) 130, 643
Eco47I GGWCC 3 cut(s) 32, 40, 88
Eco47III AGCGCT 1 cut(s) 22
Eco57I CTGAAG 2 cut(s) 119, 384
EcoO109I RGGNCCY 3 cut(s) 40, 88, 145
EcoRII CCWGG 7 cut(s) 25, 163, 180, 328, 486, 636, 777
EcoRV GATATC 2 cut(s) 130, 643
EcoT14I CCWWGG 1 cut(s) 717
ErhI CCWWGG 1 cut(s) 717
Esp3I CGTCTC 1 cut(s) 232
FaeI CATG 2 cut(s) 440, 721
FaiI YATR 8 cut(s) 11, 282, 398, 438, 719, 907, 909, 951
FatI CATG 2 cut(s) 436, 717
FauI CCCGC 1 cut(s) 588
Fnu4HI GCNGC 4 cut(s) 351, 783, 819, 915
FokI GGATG 4 cut(s) 359, 620, 641, 761
Fsp4HI GCNGC 4 cut(s) 351, 783, 819, 915
FspBI CTAG 2 cut(s) 354, 740
GlaI GCGC 3 cut(s) 22, 594, 767
GluI GCNGC 4 cut(s) 351, 783, 819, 915
GsuI CTGGAG 2 cut(s) 9, 291
HaeII RGCGCY 2 cut(s) 24, 769
HaeIII GGCC 3 cut(s) 107, 147, 853
HapII CCGG 4 cut(s) 35, 406, 881, 928
HgaI GACGC 1 cut(s) 852
HhaI GCGC 3 cut(s) 23, 595, 768
Hin1II CATG 2 cut(s) 440, 721
Hin6I GCGC 3 cut(s) 21, 593, 766
HinP1I GCGC 3 cut(s) 21, 593, 766
HincII GTYRAC 1 cut(s) 387
HindII GTYRAC 1 cut(s) 387
HindIII AAGCTT 1 cut(s) 685
HpaII CCGG 4 cut(s) 35, 406, 881, 928
HphI GGTGA 5 cut(s) 28, 257, 610, 886, 917
Hpy166II GTNNAC 4 cut(s) 32, 375, 387, 889
Hpy188I TCNGA 3 cut(s) 138, 474, 956
Hpy188III TCNNGA 5 cut(s) 188, 198, 362, 712, 806
Hpy8I GTNNAC 4 cut(s) 32, 375, 387, 889
Hpy99I CGWCG 1 cut(s) 669
HpyAV CCTTC 6 cut(s) 136, 143, 244, 283, 337, 595
HpyCH4III ACNGT 4 cut(s) 205, 379, 391, 680
HpyCH4IV ACGT 3 cut(s) 225, 425, 461
HpyCH4V TGCA 4 cut(s) 375, 467, 540, 857
HpyF10VI GCNNNNNNNGC 3 cut(s) 302, 447, 920
HpyF3I CTNAG 1 cut(s) 285
HpySE526I ACGT 3 cut(s) 225, 425, 461
Hsp92II CATG 2 cut(s) 440, 721
HspAI GCGC 3 cut(s) 21, 593, 766
KroI GCCGGC 1 cut(s) 405
KroNI GCCGGC 1 cut(s) 407
Kzo9I GATC 4 cut(s) 443, 544, 708, 742
LmnI GCTCC 4 cut(s) 28, 328, 491, 551
Lsp1109I GCAGC 3 cut(s) 337, 794, 830
LweI GCATC 1 cut(s) 337
MabI ACCWGGT 1 cut(s) 328
MaeI CTAG 2 cut(s) 354, 740
MaeII ACGT 3 cut(s) 225, 425, 461
MaeIII GTNAC 1 cut(s) 730
MalI GATC 4 cut(s) 445, 546, 710, 744
MboI GATC 4 cut(s) 443, 544, 708, 742
MboII GAAGA 4 cut(s) 74, 533, 617, 737
MflI RGATCY 2 cut(s) 544, 742
MhlI GDGCHC 2 cut(s) 262, 377
MluCI AATT 3 cut(s) 453, 468, 568
MmeI TCCRAC 1 cut(s) 70
MroNI GCCGGC 1 cut(s) 405
MseI TTAA 1 cut(s) 683
MspA1I CMGCKG 2 cut(s) 305, 512
MspI CCGG 4 cut(s) 35, 406, 881, 928
MspR9I CCNGG 7 cut(s) 27, 165, 182, 330, 488, 638, 779
MvaI CCWGG 7 cut(s) 27, 165, 182, 330, 488, 638, 779
MvnI CGCG 3 cut(s) 595, 713, 863
MwoI GCNNNNNNNGC 3 cut(s) 302, 447, 920
NaeI GCCGGC 1 cut(s) 407
NcoI CCATGG 1 cut(s) 717
NdeII GATC 4 cut(s) 443, 544, 708, 742
NgoMIV GCCGGC 1 cut(s) 405
NlaIII CATG 2 cut(s) 440, 721
NlaIV GGNNCC 2 cut(s) 169, 202
NruI TCGCGA 1 cut(s) 713
PdiI GCCGGC 1 cut(s) 407
PfoI TCCNGGA 1 cut(s) 636
PinAI ACCGGT 1 cut(s) 880
PkrI GCNGC 4 cut(s) 352, 784, 820, 916
PpuMI RGGWCCY 2 cut(s) 40, 88
Psp1406I AACGTT 1 cut(s) 425
Psp5II RGGWCCY 2 cut(s) 40, 88
Psp6I CCWGG 7 cut(s) 25, 163, 180, 328, 486, 636, 777
PspGI CCWGG 7 cut(s) 25, 163, 180, 328, 486, 636, 777
PspN4I GGNNCC 2 cut(s) 169, 202
PspPI GGNCC 4 cut(s) 32, 40, 88, 145
PspPPI RGGWCCY 2 cut(s) 40, 88
PsuI RGATCY 2 cut(s) 544, 742
PvuII CAGCTG 2 cut(s) 305, 512
RruI TCGCGA 1 cut(s) 713
RsaI GTAC 4 cut(s) 152, 315, 460, 756
RsaNI GTAC 4 cut(s) 151, 314, 459, 755
SaqAI TTAA 1 cut(s) 683
SatI GCNGC 4 cut(s) 351, 783, 819, 915
Sau3AI GATC 4 cut(s) 443, 544, 708, 742
Sau96I GGNCC 4 cut(s) 32, 40, 88, 145
ScaI AGTACT 1 cut(s) 315
ScrFI CCNGG 7 cut(s) 27, 165, 182, 330, 488, 638, 779
SduI GDGCHC 2 cut(s) 262, 377
SexAI ACCWGGT 1 cut(s) 328
SfaNI GCATC 1 cut(s) 337
SfcI CTRYAG 1 cut(s) 9
SinI GGWCC 3 cut(s) 32, 40, 88
Sse9I AATT 3 cut(s) 453, 468, 568
SsiI CCGC 5 cut(s) 441, 450, 595, 723, 914
SspMI CTAG 2 cut(s) 354, 740
StyD4I CCNGG 7 cut(s) 25, 163, 180, 328, 486, 636, 777
StyI CCWWGG 1 cut(s) 717
TaaI ACNGT 4 cut(s) 205, 379, 391, 680
TaiI ACGT 3 cut(s) 228, 428, 464
TaqI TCGA 2 cut(s) 189, 667
TasI AATT 3 cut(s) 453, 468, 568
TatI WGTACW 2 cut(s) 313, 754
TauI GCSGC 1 cut(s) 917
Tru1I TTAA 1 cut(s) 683
Tru9I TTAA 1 cut(s) 683
TscAI CASTG 1 cut(s) 382
TseI GCWGC 3 cut(s) 350, 782, 818
TspDTI ATGAA 3 cut(s) 17, 425, 924
TspGWI ACGGA 3 cut(s) 653, 891, 963
TspRI CASTG 1 cut(s) 382
VneI GTGCAC 1 cut(s) 373
VpaK11BI GGWCC 3 cut(s) 32, 40, 88
XcmI CCANNNNNNNNNTGG 1 cut(s) 178
XspI CTAG 2 cut(s) 354, 740
ZrmI AGTACT 1 cut(s) 315
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.