Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0000394

Physical Location & Seq

Genomic Coordinates Forward (+)

30175421 .. 30182920

Gene Structure 7500 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g29820.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1233 bp

ATGAACTTAGTTTTAGACCTAAGATATGCGTCTTTAGCGTTTCACTGTATTTTGCTCCACTCTGGCAGTGAAATAGGATTTGAGTCTTTGTTTTCCCTCAAAGGGTCGTTTCCTCATTGGTCCCTCAAAAACTGCGCCACGGCACGTAGTTTGCCCCACGGCATGTCGTTTGTTCCACCGTTTAGTTTAACCTTCTTCTGTAGCGAACGTGTAAGAGTCCTGCTGTCAGTGGGAAGCTCAAAGTCGAAAGCTTCAATGAAGGCCGTAGTGATAACGTCTCCAGGTGGGCCCGACGTCCTGAAGCTCCAGGAAGTCCAGGACCCACAGCTCAAAGACGATGAAGTTCTGATCGATGTCACCGCCACGGCGGTGAACCGGGCCGACACGATCCAGAGGAAGGGGGCGTATCCGCCGCCTCCGGGTTCCAGCCCCTACCTGGGACTCGAGTGTTCTGGAACCATCGAGGCCGTCGGGAAACACGTGTCGCGCTGGCAAGCCAGTGATCGGGTGTGTGCTCTTCTTAGTGGGGGAGGGTATGCCGAGAAGGTGGCTGTTCCAGTAGGACAAGTTTTTCCCATCCCACCTGGTATTTCTTTGACGGATGCTGCTAGCTTTCCTGAGGTGGCGTGCACTGTTTGGTCGACTGTATTTATGATGAGTCGGCTTTCTGCTGGTGAAACATTTCTGGTTCATGGGGGCTCCAGTGGAATTGGTACATTTGCAATTCAGATAGCCAAATACCAGGGAGTAAGGGTTTTTGTCACAGCGGGAAATGAGGAAAAGTTAGCTGTTTGCAAGAATCTTGGAGCCGACGTATGCATCAATTACAAGACAGAGGACTTTGTTGCACGGGTGAAAGAAGAAACAGGCGGCAAAGGTGTTGATGTTATCTTGGATAGCATTGGGGCAGACTATTTCCGGCGGAACCTTGACAGCTTAAACTTTGATGGGAGGCTTTTTGTTATTGGGCTCATGAGTGGTCCTGTTACAGAATTCGATCTTCGTGCTGTGCTTTCGAGGCGTCTCACCATCCAAGCTGCTGGCTTGCGATACAGAAGTCCCGAGAACAAAGCGGTAATTGTTAGGGAGGTGGAGAACAATGTGTGGCCAGCAATTGTTGCTGGCAAGGTGAAAACTGTGATATACAAGTCTTTTCCGTTATCTGAAGCAGCGGAAGCTCACCGGCTCATGGAAAGTAGCCAGCATATCGGAAAGATACTGCTCGTTGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0003960 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006725 GO:0006732 GO:0006733 GO:0006739 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009117 GO:0009987 GO:0010941 GO:0016491 GO:0016651 GO:0016655 GO:0019362 GO:0019637 GO:0034641 GO:0036094 GO:0042802 GO:0042803 GO:0042981 GO:0043067 GO:0043167 GO:0043168 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046496 GO:0046983 GO:0048037 GO:0048038 GO:0050661 GO:0050662 GO:0050789 GO:0050794 GO:0051186 GO:0055086 GO:0055114 GO:0065007 GO:0070402 GO:0071704 GO:0072524 GO:0097159 GO:1901265 GO:1901360 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ADH_N ADH_zinc_N

Protein Analysis

411

Amino Acids

44.21

Weight (kDa)

8.34

Isoelectric Point (pI)

45.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000394)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21580
fragaria_vesca	FvH4_3g02190 FvH4_3g02190 FvH4_3g02190 FvH4_3g04320 FvH4_3g04340 FvH4_3g18080 FvH4_3g18080 FvH4_3g18080 FvH4_6g30490 FvH4_6g30490 FvH4_6g30490 FvH4_6g30490
malus_domestica	MD05G1217800.v1.1 MD05G1323900.v1.1 MD12G1074500.v1.1 MD14G1066500.v1.1
prunus_persica	Prupe.4G038700_v2.0.a1 Prupe.7G059000_v2.0.a1 Prupe.7G059000_v2.0.a1 Prupe.7G059300_v2.0.a1 Prupe.7G059300_v2.0.a1 Prupe.7G059300_v2.0.a1 Prupe.7G059300_v2.0.a1
pyrus_communis	pycom05g29820
rosa_chinensis	RchiOBHm_Chr1g0318171 RchiOBHm_Chr5g0003241 RchiOBHm_Chr5g0006701 RchiOBHm_Chr5g0006721 RchiOBHm_Chr5g0006731 RchiOBHm_Chr5g0030211 RchiOBHm_Chr5g0030291 RchiOBHm_Chr5g0030331 RchiOBHm_Chr5g0030371 RchiOBHm_Chr5g0030401 RchiOBHm_Chr5g0030471
rosa_laevigata	RLG00000025923 RLG00000025924 RLG00000030556 RLG00000031088 RLG00000031336 RLG00000031418 RLG00000031420 RLG00000031421 RLG00000031422 RLG00000031423 RLG00000033220
rosa_multiflora	Rmu_sc0001886.1_g000010 Rmu_sc0001886.1_g000011 Rmu_sc0001886.1_g000012 Rmu_sc0010917.1_g000018 Rmu_sc0011424.1_g000013 Rmu_sc0017347.1_g000003 Rmu_sc0017347.1_g000005 Rmu_sc0018387.1_g000006 Rmu_sc0018387.1_g000008
rosa_roxburghii	Rroxscaffold_1G00049810 Rroxscaffold_1G00069320 Rroxscaffold_1G00072770 Rroxscaffold_4G00329990 Rroxscaffold_6G00426520
rosa_rugosa	Rorug01G0019200 Rorug01G0019300 Rorug01G0019400 Rorug02G0611300 Rorug02G0611400 Rorug04G0401400 Rorug04G0423700 Rorug04G0424000 Rorug05G0118000
rosa_samantha	Rh1CG030000 Rh1DG040100 Rh2DG133300 Rh3AG010300 Rh3BG010000 Rh3DG010500 Rh5AG026800 Rh5AG026900 Rh5AG027800 Rh5AG051600 Rh5AG051800 Rh5BG028000 Rh5BG050700 Rh5BG129800 Rh5BG129900 Rh5CG029400 Rh5CG029500 Rh5CG030100 Rh5CG059100 Rh5CG059300 Rh5CG059400 Rh5DG026200 Rh5DG049800 Rh5DG049900 Rh5DG214000
rosa_wichuraiana	Rw1G002510 Rw5G002450 Rw5G002640 Rw5G004650 Rw5G005260 Rw5G005270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	297
AccI	GTMKAC	1 cut(s)	641
AccII	CGCG	1 cut(s)	487
AciI	CCGC	9 cut(s)	360, 368, 410, 413, 767, 870, 922, 1073, 1172
AclWI	GGATC	1 cut(s)	382
AcoI	YGGCCR	1 cut(s)	1106
AcsI	RAATTY	1 cut(s)	992
AcuI	CTGAAG	2 cut(s)	320, 1185
AcvI	CACGTG	1 cut(s)	481
AcyI	GRCGYC	2 cut(s)	294, 1021
AfaI	GTAC	1 cut(s)	715
AfiI	CCNNNNNNNGG	7 cut(s)	102, 397, 419, 436, 437, 504, 1189
AflIII	ACRYGT	3 cut(s)	208, 478, 480
AgsI	TTSAA	1 cut(s)	255
AjnI	CCWGG	6 cut(s)	280, 306, 315, 435, 583, 741
AleI	CACNNNNGTG	1 cut(s)	368
AluBI	AGCT	9 cut(s)	237, 251, 304, 328, 612, 788, 936, 1037, 1178
AluI	AGCT	9 cut(s)	237, 251, 304, 328, 612, 788, 936, 1037, 1178
Alw21I	GWGCWC	2 cut(s)	517, 632
Alw26I	GTCTC	2 cut(s)	282, 1028
Alw44I	GTGCAC	1 cut(s)	628
AlwI	GGATC	1 cut(s)	382
Ama87I	CYCGRG	2 cut(s)	443, 1061
AoxI	GGCC	5 cut(s)	261, 287, 378, 465, 1106
ApaI	GGGCCC	1 cut(s)	291
ApaLI	GTGCAC	1 cut(s)	628
ApeKI	GCWGC	3 cut(s)	605, 1037, 1169
ApoI	RAATTY	1 cut(s)	992
Asp700I	GAANNNNTTC	1 cut(s)	681
AspLEI	GCGC	2 cut(s)	137, 489
AspS9I	GGNCC	6 cut(s)	120, 287, 288, 319, 378, 980
AsuC2I	CCSGG	2 cut(s)	377, 420
AsuHPI	GGTGA	7 cut(s)	349, 382, 686, 865, 1018, 1141, 1172
AsuNHI	GCTAGC	1 cut(s)	608
AvaI	CYCGRG	2 cut(s)	443, 1061
AvaII	GGWCC	3 cut(s)	120, 319, 980
AxyI	CCTNAGG	1 cut(s)	618
BaeGI	GKGCMC	2 cut(s)	291, 632
BaeI	ACNNNNGTAYC	2 cut(s)	1042, 1075
BalI	TGGCCA	1 cut(s)	1108
BanII	GRGCYC	3 cut(s)	291, 701, 972
BbrPI	CACGTG	1 cut(s)	481
Bbv12I	GWGCWC	2 cut(s)	517, 632
BbvI	GCAGC	3 cut(s)	592, 1024, 1181
BccI	CCATC	4 cut(s)	467, 584, 941, 1037
BceAI	ACGGC	5 cut(s)	156, 175, 248, 381, 452
BcgI	CGANNNNNNTGC	2 cut(s)	986, 1020
BciT130I	CCWGG	6 cut(s)	282, 308, 317, 437, 585, 743
BciVI	GTATCC	1 cut(s)	417
BcnI	CCSGG	2 cut(s)	377, 420
BcoDI	GTCTC	2 cut(s)	282, 1028
BfaI	CTAG	1 cut(s)	609
BfmI	CTRYAG	1 cut(s)	199
BfuI	GTATCC	1 cut(s)	417
BisI	GCNGC	5 cut(s)	413, 606, 871, 1038, 1170
BlsI	GCNGC	5 cut(s)	414, 607, 872, 1039, 1171
Bme1390I	CCNGG	8 cut(s)	282, 308, 317, 377, 420, 437, 585, 743
Bme18I	GGWCC	3 cut(s)	120, 319, 980
BmeT110I	CYCGRG	2 cut(s)	443, 1061
BmgT120I	GGNCC	6 cut(s)	120, 287, 288, 319, 378, 980
BmiI	GGNNCC	8 cut(s)	122, 289, 321, 424, 457, 700, 808, 926
BmrFI	CCNGG	8 cut(s)	282, 308, 317, 377, 420, 437, 585, 743
BmsI	GCATC	2 cut(s)	592, 828
BmtI	GCTAGC	1 cut(s)	612
BpmI	CTGGAG	3 cut(s)	264, 290, 685
BpuMI	CCSGG	2 cut(s)	377, 420
Bsa29I	ATCGAT	1 cut(s)	351
BsaAI	YACGTR	2 cut(s)	146, 481
BsaHI	GRCGYC	2 cut(s)	294, 1021
BsaJI	CCNNGG	5 cut(s)	138, 157, 363, 436, 742
BsaXI	ACNNNNNCTCC	4 cut(s)	738, 768, 798, 828
Bsc4I	CCNNNNNNNGG	7 cut(s)	102, 397, 419, 436, 437, 504, 1189
Bse118I	RCCGGY	1 cut(s)	1182
Bse1I	ACTGG	3 cut(s)	498, 557, 702
Bse21I	CCTNAGG	1 cut(s)	618
BseBI	CCWGG	6 cut(s)	282, 308, 317, 437, 585, 743
BseCI	ATCGAT	1 cut(s)	351
BseDI	CCNNGG	5 cut(s)	138, 157, 363, 436, 742
BseGI	GGATG	3 cut(s)	576, 607, 1029
BseLI	CCNNNNNNNGG	7 cut(s)	102, 397, 419, 436, 437, 504, 1189
BseMII	CTCAG	1 cut(s)	609
BseNI	ACTGG	3 cut(s)	498, 557, 702
BseSI	GKGCMC	2 cut(s)	291, 632
BseXI	GCAGC	3 cut(s)	592, 1024, 1181
Bsh1236I	CGCG	1 cut(s)	487
BshFI	GGCC	5 cut(s)	263, 289, 380, 467, 1108
BshVI	ATCGAT	1 cut(s)	351
BsiHKAI	GWGCWC	2 cut(s)	517, 632
BsiHKCI	CYCGRG	2 cut(s)	443, 1061
BsiSI	CCGG	4 cut(s)	376, 419, 919, 1183
BslFI	GGGAC	3 cut(s)	106, 453, 1044
BslI	CCNNNNNNNGG	7 cut(s)	102, 397, 419, 436, 437, 504, 1189
BsmAI	GTCTC	2 cut(s)	282, 1028
BsmBI	CGTCTC	2 cut(s)	282, 1028
BsmFI	GGGAC	3 cut(s)	106, 453, 1044
BsnI	GGCC	5 cut(s)	263, 289, 380, 467, 1108
BsoBI	CYCGRG	2 cut(s)	443, 1061
Bsp120I	GGGCCC	1 cut(s)	287
Bsp1286I	GDGCHC	5 cut(s)	291, 517, 632, 701, 972
Bsp143I	GATC	4 cut(s)	348, 387, 502, 997
BspACI	CCGC	9 cut(s)	360, 368, 410, 413, 767, 870, 922, 1073, 1172
BspANI	GGCC	5 cut(s)	263, 289, 380, 467, 1108
BspCNI	CTCAG	1 cut(s)	610
BspDI	ATCGAT	1 cut(s)	351
BspFNI	CGCG	1 cut(s)	487
BspHI	TCATGA	1 cut(s)	972
BspLI	GGNNCC	8 cut(s)	122, 289, 321, 424, 457, 700, 808, 926
BspOI	GCTAGC	1 cut(s)	612
BspPI	GGATC	1 cut(s)	382
BspQI	GCTCTTC	1 cut(s)	522
BsrFI	RCCGGY	1 cut(s)	1182
BsrI	ACTGG	3 cut(s)	498, 557, 702
BssAI	RCCGGY	1 cut(s)	1182
BssECI	CCNNGG	5 cut(s)	138, 157, 363, 436, 742
BssMI	GATC	4 cut(s)	348, 387, 502, 997
BssNI	GRCGYC	2 cut(s)	294, 1021
Bst2UI	CCWGG	6 cut(s)	282, 308, 317, 437, 585, 743
Bst4CI	ACNGT	5 cut(s)	47, 180, 634, 646, 1138
Bst6I	CTCTTC	1 cut(s)	522
BstACI	GRCGYC	2 cut(s)	294, 1021
BstAPI	GCANNNNNTGC	1 cut(s)	1118
BstBAI	YACGTR	2 cut(s)	146, 481
BstC8I	GCNNGC	9 cut(s)	491, 495, 610, 628, 1042, 1046, 1110, 1123, 1202
BstDEI	CTNAG	4 cut(s)	7, 20, 521, 618
BstDSI	CCRYGG	3 cut(s)	138, 157, 363
BstF5I	GGATG	3 cut(s)	576, 607, 1029
BstFNI	CGCG	1 cut(s)	487
BstHHI	GCGC	2 cut(s)	137, 489
BstKTI	GATC	4 cut(s)	351, 390, 505, 1000
BstMAI	GTCTC	2 cut(s)	282, 1028
BstMBI	GATC	4 cut(s)	348, 387, 502, 997
BstMWI	GCNNNNNNNGC	4 cut(s)	35, 1018, 1118, 1175
BstNI	CCWGG	6 cut(s)	282, 308, 317, 437, 585, 743
BstNSI	RCATGY	1 cut(s)	166
BstSCI	CCNGG	8 cut(s)	280, 306, 315, 375, 418, 435, 583, 741
BstSFI	CTRYAG	1 cut(s)	199
BstSLI	GKGCMC	2 cut(s)	291, 632
BstUI	CGCG	1 cut(s)	487
BstV1I	GCAGC	3 cut(s)	592, 1024, 1181
BstXI	CCANNNNNNTGG	1 cut(s)	1040
Bsu15I	ATCGAT	1 cut(s)	351
Bsu36I	CCTNAGG	1 cut(s)	618
BsuI	GTATCC	1 cut(s)	417
BsuRI	GGCC	5 cut(s)	263, 289, 380, 467, 1108
BsuTUI	ATCGAT	1 cut(s)	351
BtgI	CCRYGG	3 cut(s)	138, 157, 363
BtsCI	GGATG	3 cut(s)	576, 607, 1029
BtsI	GCAGTG	1 cut(s)	73
BtsIMutI	CAGTG	6 cut(s)	43, 73, 234, 505, 630, 709
Cac8I	GCNNGC	9 cut(s)	491, 495, 610, 628, 1042, 1046, 1110, 1123, 1202
CciI	TCATGA	1 cut(s)	972
CfoI	GCGC	2 cut(s)	137, 489
Cfr10I	RCCGGY	1 cut(s)	1182
Cfr13I	GGNCC	6 cut(s)	120, 287, 288, 319, 378, 980
ClaI	ATCGAT	1 cut(s)	351
CseI	GACGC	2 cut(s)	18, 1010
CsiI	ACCWGGT	1 cut(s)	583
Csp6I	GTAC	1 cut(s)	714
CviAII	CATG	4 cut(s)	163, 692, 973, 1189
CviQI	GTAC	1 cut(s)	714
DdeI	CTNAG	4 cut(s)	7, 20, 521, 618
DpnI	GATC	4 cut(s)	350, 389, 504, 999
DpnII	GATC	4 cut(s)	348, 387, 502, 997
EaeI	YGGCCR	1 cut(s)	1106
Eam1104I	CTCTTC	1 cut(s)	522
EarI	CTCTTC	1 cut(s)	522
EciI	GGCGGA	2 cut(s)	399, 937
Eco24I	GRGCYC	3 cut(s)	291, 701, 972
Eco47I	GGWCC	3 cut(s)	120, 319, 980
Eco57I	CTGAAG	2 cut(s)	320, 1185
Eco72I	CACGTG	1 cut(s)	481
Eco81I	CCTNAGG	1 cut(s)	618
Eco88I	CYCGRG	2 cut(s)	443, 1061
EcoO109I	RGGNCCY	1 cut(s)	319
EcoRI	GAATTC	1 cut(s)	992
EcoRII	CCWGG	6 cut(s)	280, 306, 315, 435, 583, 741
EcoT22I	ATGCAT	1 cut(s)	821
EcoT38I	GRGCYC	3 cut(s)	291, 701, 972
Esp3I	CGTCTC	2 cut(s)	282, 1028
FaeI	CATG	4 cut(s)	166, 695, 976, 1192
FaqI	GGGAC	3 cut(s)	106, 453, 1044
FatI	CATG	4 cut(s)	162, 691, 972, 1188
FauI	CCCGC	1 cut(s)	760
FblI	GTMKAC	1 cut(s)	641
Fnu4HI	GCNGC	5 cut(s)	413, 606, 871, 1038, 1170
FokI	GGATG	3 cut(s)	563, 614, 1016
FriOI	GRGCYC	3 cut(s)	291, 701, 972
Fsp4HI	GCNGC	5 cut(s)	413, 606, 871, 1038, 1170
FspBI	CTAG	1 cut(s)	609
GlaI	GCGC	2 cut(s)	136, 488
GluI	GCNGC	5 cut(s)	413, 606, 871, 1038, 1170
GsuI	CTGGAG	3 cut(s)	264, 290, 685
HaeIII	GGCC	5 cut(s)	263, 289, 380, 467, 1108
HapII	CCGG	4 cut(s)	376, 419, 919, 1183
HgaI	GACGC	2 cut(s)	18, 1010
HhaI	GCGC	2 cut(s)	137, 489
Hin1I	GRCGYC	2 cut(s)	294, 1021
Hin1II	CATG	4 cut(s)	166, 695, 976, 1192
Hin6I	GCGC	2 cut(s)	135, 487
HinP1I	GCGC	2 cut(s)	135, 487
HincII	GTYRAC	1 cut(s)	642
HindII	GTYRAC	1 cut(s)	642
HindIII	AAGCTT	1 cut(s)	249
HinfI	GANTC	5 cut(s)	83, 216, 441, 658, 799
HpaII	CCGG	4 cut(s)	376, 419, 919, 1183
HphI	GGTGA	7 cut(s)	349, 382, 686, 865, 1018, 1141, 1172
Hpy166II	GTNNAC	3 cut(s)	373, 630, 642
Hpy188I	TCNGA	4 cut(s)	348, 729, 1165, 1211
Hpy188III	TCNNGA	7 cut(s)	298, 391, 453, 472, 617, 973, 1061
Hpy8I	GTNNAC	3 cut(s)	373, 630, 642
Hpy99I	CGWCG	3 cut(s)	296, 473, 815
HpyAV	CCTTC	4 cut(s)	202, 253, 391, 538
HpyCH4III	ACNGT	5 cut(s)	47, 180, 634, 646, 1138
HpyCH4IV	ACGT	6 cut(s)	145, 208, 275, 294, 480, 813
HpyCH4V	TGCA	5 cut(s)	630, 722, 795, 819, 848
HpyF10VI	GCNNNNNNNGC	4 cut(s)	35, 1018, 1118, 1175
HpyF3I	CTNAG	4 cut(s)	7, 20, 521, 618
HpySE526I	ACGT	6 cut(s)	145, 208, 275, 294, 480, 813
Hsp92I	GRCGYC	2 cut(s)	294, 1021
Hsp92II	CATG	4 cut(s)	166, 695, 976, 1192
HspAI	GCGC	2 cut(s)	135, 487
Kzo9I	GATC	4 cut(s)	348, 387, 502, 997
LguI	GCTCTTC	1 cut(s)	522
LmnI	GCTCC	4 cut(s)	60, 309, 704, 806
Lsp1109I	GCAGC	3 cut(s)	592, 1024, 1181
LweI	GCATC	2 cut(s)	592, 828
MabI	ACCWGGT	1 cut(s)	583
MaeI	CTAG	1 cut(s)	609
MaeII	ACGT	6 cut(s)	145, 208, 275, 294, 480, 813
MaeIII	GTNAC	3 cut(s)	355, 760, 985
MalI	GATC	4 cut(s)	350, 389, 504, 999
MboI	GATC	4 cut(s)	348, 387, 502, 997
MboII	GAAGA	4 cut(s)	187, 509, 872, 992
MfeI	CAATTG	1 cut(s)	1113
MhlI	GDGCHC	5 cut(s)	291, 517, 632, 701, 972
MlsI	TGGCCA	1 cut(s)	1108
MluCI	AATT	6 cut(s)	708, 723, 823, 992, 1077, 1113
MluNI	TGGCCA	1 cut(s)	1108
MlyI	GAGTC	4 cut(s)	92, 225, 435, 667
Mox20I	TGGCCA	1 cut(s)	1108
Mph1103I	ATGCAT	1 cut(s)	821
MroXI	GAANNNNTTC	1 cut(s)	681
MscI	TGGCCA	1 cut(s)	1108
MseI	TTAA	2 cut(s)	188, 938
MslI	CAYNNNNRTG	1 cut(s)	368
Msp20I	TGGCCA	1 cut(s)	1108
MspA1I	CMGCKG	2 cut(s)	767, 1172
MspI	CCGG	4 cut(s)	376, 419, 919, 1183
MspR9I	CCNGG	8 cut(s)	282, 308, 317, 377, 420, 437, 585, 743
MunI	CAATTG	1 cut(s)	1113
MvaI	CCWGG	6 cut(s)	282, 308, 317, 437, 585, 743
MvnI	CGCG	1 cut(s)	487
MwoI	GCNNNNNNNGC	4 cut(s)	35, 1018, 1118, 1175
NciI	CCSGG	2 cut(s)	377, 420
NdeII	GATC	4 cut(s)	348, 387, 502, 997
NheI	GCTAGC	1 cut(s)	608
NlaIII	CATG	4 cut(s)	166, 695, 976, 1192
NlaIV	GGNNCC	8 cut(s)	122, 289, 321, 424, 457, 700, 808, 926
NmeAIII	GCCGAG	1 cut(s)	565
NmuCI	GTSAC	2 cut(s)	355, 760
NsiI	ATGCAT	1 cut(s)	821
NspI	RCATGY	1 cut(s)	166
OliI	CACNNNNGTG	1 cut(s)	368
PaeR7I	CTCGAG	1 cut(s)	443
PagI	TCATGA	1 cut(s)	972
PciSI	GCTCTTC	1 cut(s)	522
PcsI	WCGNNNNNNNCGW	1 cut(s)	477
PdmI	GAANNNNTTC	1 cut(s)	681
PfeI	GAWTC	1 cut(s)	799
PfoI	TCCNGGA	2 cut(s)	306, 315
PkrI	GCNGC	5 cut(s)	414, 607, 872, 1039, 1171
PleI	GAGTC	4 cut(s)	91, 224, 435, 666
PmaCI	CACGTG	1 cut(s)	481
PmlI	CACGTG	1 cut(s)	481
PpsI	GAGTC	4 cut(s)	91, 224, 435, 666
Ppu21I	YACGTR	2 cut(s)	146, 481
PpuMI	RGGWCCY	1 cut(s)	319
Psp5II	RGGWCCY	1 cut(s)	319
Psp6I	CCWGG	6 cut(s)	280, 306, 315, 435, 583, 741
PspCI	CACGTG	1 cut(s)	481
PspGI	CCWGG	6 cut(s)	280, 306, 315, 435, 583, 741
PspN4I	GGNNCC	8 cut(s)	122, 289, 321, 424, 457, 700, 808, 926
PspOMI	GGGCCC	1 cut(s)	287
PspPI	GGNCC	6 cut(s)	120, 287, 288, 319, 378, 980
PspPPI	RGGWCCY	1 cut(s)	319
PspXI	VCTCGAGB	1 cut(s)	443
RsaI	GTAC	1 cut(s)	715
RsaNI	GTAC	1 cut(s)	714
RseI	CAYNNNNRTG	1 cut(s)	368
SalI	GTCGAC	1 cut(s)	640
SapI	GCTCTTC	1 cut(s)	522
SaqAI	TTAA	2 cut(s)	188, 938
SatI	GCNGC	5 cut(s)	413, 606, 871, 1038, 1170
Sau3AI	GATC	4 cut(s)	348, 387, 502, 997
Sau96I	GGNCC	6 cut(s)	120, 287, 288, 319, 378, 980
SchI	GAGTC	4 cut(s)	92, 225, 435, 667
ScrFI	CCNGG	8 cut(s)	282, 308, 317, 377, 420, 437, 585, 743
SduI	GDGCHC	5 cut(s)	291, 517, 632, 701, 972
SexAI	ACCWGGT	1 cut(s)	583
SfaNI	GCATC	2 cut(s)	592, 828
SfcI	CTRYAG	1 cut(s)	199
Sfr274I	CTCGAG	1 cut(s)	443
SinI	GGWCC	3 cut(s)	120, 319, 980
SlaI	CTCGAG	1 cut(s)	443
SmiMI	CAYNNNNRTG	1 cut(s)	368
SmlI	CTYRAG	1 cut(s)	443
SmoI	CTYRAG	1 cut(s)	443
Sse9I	AATT	6 cut(s)	708, 723, 823, 992, 1077, 1113
SsiI	CCGC	9 cut(s)	360, 368, 410, 413, 767, 870, 922, 1073, 1172
SspMI	CTAG	1 cut(s)	609
StyD4I	CCNGG	8 cut(s)	280, 306, 315, 375, 418, 435, 583, 741
TaaI	ACNGT	5 cut(s)	47, 180, 634, 646, 1138
TaiI	ACGT	6 cut(s)	148, 211, 278, 297, 483, 816
TaqI	TCGA	7 cut(s)	245, 351, 444, 462, 641, 996, 1016
TasI	AATT	6 cut(s)	708, 723, 823, 992, 1077, 1113
TauI	GCSGC	2 cut(s)	415, 873
TfiI	GAWTC	1 cut(s)	799
Tru1I	TTAA	2 cut(s)	188, 938
Tru9I	TTAA	2 cut(s)	188, 938
TscAI	CASTG	6 cut(s)	50, 73, 234, 505, 637, 709
TseFI	GTSAC	2 cut(s)	355, 760
TseI	GCWGC	3 cut(s)	605, 1037, 1169
Tsp45I	GTSAC	2 cut(s)	355, 760
TspDTI	ATGAA	4 cut(s)	17, 272, 354, 680
TspGWI	ACGGA	2 cut(s)	614, 1146
TspRI	CASTG	6 cut(s)	50, 73, 234, 505, 637, 709
VneI	GTGCAC	1 cut(s)	628
VpaK11BI	GGWCC	3 cut(s)	120, 319, 980
XapI	RAATTY	1 cut(s)	992
XceI	RCATGY	1 cut(s)	166
XcmI	CCANNNNNNNNNTGG	1 cut(s)	433
XhoI	CTCGAG	1 cut(s)	443
XmiI	GTMKAC	1 cut(s)	641
XmnI	GAANNNNTTC	1 cut(s)	681
XspI	CTAG	1 cut(s)	609
ZraI	GACGTC	1 cut(s)	295
Zsp2I	ATGCAT	1 cut(s)	821

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.