RLG00000031423

quinone oxidoreductase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
5031641 .. 5033032
1392 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031423

Sequence Viewer

Length: 831 bp
ATGAAGGCCATAGTGGTTACCTCACCAGGTAGACCGGAGGTCCTCCAATTACAGGAAGTGGAAGACCCCAAAGTAAAAGACGACGAGGTCCTGGTCAAAGTCGAGGCCACGTCACTGAACCAGGCCGACAACTTACAGCGGCTCGGCTTCTACCCACCACCTCCGGGTTCCAGCGAGTTGCTGGACCTGGAATGTTTTGGAACCATCGAGGCCGTCGGGGAACAAGTGTCACGCTGGAAAGCCGACGATCAAGTGTGTGCTCTTCTTACTGGAGGAGGCTATGCTGAGAAGGTGGCTGTTCCAGCTGGACAAATTCTTCCACTCCTACCCGGTATTTCTTTGAAGGATGCAGCTAGTCTCCCACAGGTGGCATGCACTGTTTGGTTGATTGTTTTCATGACGAGTCGACTATCTTCTGGGGAAATATTTTTGGTAACAACATATTTCAAGACGGAGGATTTTGTGGCACGAATAAAAGAAGAAACTGGTGGCAAAGGTGTTGATGTCATCTTGGATATCCTTGGGGCAGCCTATTTTCAGCGAAACCTTGACGCTTTAAACTTTGATGGGAGGCCTTTTGTGATTGGGACCATGGGTGGTTTAGTTATAGAATTGGATCTAATTCGTGTTGTGCTTGCGAAGCGCCTCACCATCCAAGCGGCTGGCTTGCGATCTAGAAGTCGAGAAAACAAAGCATTCATAGTGAGTGACAGAGAAAAATGTATGGTCTGCAATTGCGGCCGACAAGGTGAAAACAGTGATCTACAAGCATTGGCACATCAGCTCATGGAGAGTAGCCAACATGTTGGAAAAATACTCCTCCTTCCGTGA

Protein Analysis

277

Amino Acids

30.01

Weight (kDa)

5.06

Isoelectric Point (pI)

51.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 27 - 108 1.9e-11 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N PF00107 148 - 228 2.4e-11 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000394)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21580
fragaria_vesca FvH4_3g02190 FvH4_3g02190 FvH4_3g02190 FvH4_3g04320 FvH4_3g04340 FvH4_3g18080 FvH4_3g18080 FvH4_3g18080 FvH4_6g30490 FvH4_6g30490 FvH4_6g30490 FvH4_6g30490
malus_domestica MD05G1217800.v1.1 MD05G1323900.v1.1 MD12G1074500.v1.1 MD14G1066500.v1.1
prunus_persica Prupe.4G038700_v2.0.a1 Prupe.7G059000_v2.0.a1 Prupe.7G059000_v2.0.a1 Prupe.7G059300_v2.0.a1 Prupe.7G059300_v2.0.a1 Prupe.7G059300_v2.0.a1 Prupe.7G059300_v2.0.a1
pyrus_communis pycom05g29820
rosa_chinensis RchiOBHm_Chr1g0318171 RchiOBHm_Chr5g0003241 RchiOBHm_Chr5g0006701 RchiOBHm_Chr5g0006721 RchiOBHm_Chr5g0006731 RchiOBHm_Chr5g0030211 RchiOBHm_Chr5g0030291 RchiOBHm_Chr5g0030331 RchiOBHm_Chr5g0030371 RchiOBHm_Chr5g0030401 RchiOBHm_Chr5g0030471
rosa_laevigata RLG00000025923 RLG00000025924 RLG00000030556 RLG00000031088 RLG00000031336 RLG00000031418 RLG00000031420 RLG00000031421 RLG00000031422 RLG00000031423 RLG00000033220
rosa_multiflora Rmu_sc0001886.1_g000010 Rmu_sc0001886.1_g000011 Rmu_sc0001886.1_g000012 Rmu_sc0010917.1_g000018 Rmu_sc0011424.1_g000013 Rmu_sc0017347.1_g000003 Rmu_sc0017347.1_g000005 Rmu_sc0018387.1_g000006 Rmu_sc0018387.1_g000008
rosa_roxburghii Rroxscaffold_1G00049810 Rroxscaffold_1G00069320 Rroxscaffold_1G00072770 Rroxscaffold_4G00329990 Rroxscaffold_6G00426520
rosa_rugosa Rorug01G0019200 Rorug01G0019300 Rorug01G0019400 Rorug02G0611300 Rorug02G0611400 Rorug04G0401400 Rorug04G0423700 Rorug04G0424000 Rorug05G0118000
rosa_samantha Rh1CG030000 Rh1DG040100 Rh2DG133300 Rh3AG010300 Rh3BG010000 Rh3DG010500 Rh5AG026800 Rh5AG026900 Rh5AG027800 Rh5AG051600 Rh5AG051800 Rh5BG028000 Rh5BG050700 Rh5BG129800 Rh5BG129900 Rh5CG029400 Rh5CG029500 Rh5CG030100 Rh5CG059100 Rh5CG059300 Rh5CG059400 Rh5DG026200 Rh5DG049800 Rh5DG049900 Rh5DG214000
rosa_wichuraiana Rw1G002510 Rw5G002450 Rw5G002640 Rw5G004650 Rw5G005260 Rw5G005270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 86
AccI GTMKAC 2 cut(s) 31, 406
AciI CCGC 3 cut(s) 139, 659, 738
AclWI GGATC 1 cut(s) 624
AcoI YGGCCR 1 cut(s) 739
AcsI RAATTY 1 cut(s) 312
AfiI CCNNNNNNNGG 3 cut(s) 52, 164, 367
AflIII ACRYGT 1 cut(s) 802
AgsI TTSAA 2 cut(s) 343, 448
AhdI GACNNNNNGTC 1 cut(s) 38
AjiI CACGTC 1 cut(s) 111
AjnI CCWGG 4 cut(s) 25, 90, 120, 186
AluBI AGCT 3 cut(s) 305, 353, 784
AluI AGCT 3 cut(s) 305, 353, 784
Alw21I GWGCWC 1 cut(s) 262
Alw26I GTCTC 1 cut(s) 362
AlwI GGATC 1 cut(s) 624
AoxI GGCC 6 cut(s) 6, 105, 123, 210, 572, 739
ApeKI GCWGC 2 cut(s) 350, 527
ApoI RAATTY 1 cut(s) 312
AspLEI GCGC 1 cut(s) 645
AspS9I GGNCC 4 cut(s) 40, 88, 184, 588
AsuC2I CCSGG 2 cut(s) 165, 330
AsuHPI GGTGA 3 cut(s) 15, 640, 761
AvaII GGWCC 4 cut(s) 40, 88, 184, 588
BbsI GAAGAC 1 cut(s) 69
Bbv12I GWGCWC 1 cut(s) 262
BbvI GCAGC 2 cut(s) 362, 539
BccI CCATC 3 cut(s) 212, 560, 659
BceAI ACGGC 1 cut(s) 197
BciT130I CCWGG 4 cut(s) 27, 92, 122, 188
BcnI CCSGG 2 cut(s) 165, 330
BcoDI GTCTC 1 cut(s) 362
BfaI CTAG 2 cut(s) 354, 675
BfoI RGCGCY 1 cut(s) 646
BisI GCNGC 5 cut(s) 140, 351, 528, 660, 739
BlsI GCNGC 5 cut(s) 141, 352, 529, 661, 740
Bme1390I CCNGG 6 cut(s) 27, 92, 122, 165, 188, 330
Bme18I GGWCC 4 cut(s) 40, 88, 184, 588
BmeRI GACNNNNNGTC 1 cut(s) 38
BmgBI CACGTC 1 cut(s) 111
BmgT120I GGNCC 4 cut(s) 40, 88, 184, 588
BmiI GGNNCC 3 cut(s) 169, 202, 589
BmrFI CCNGG 6 cut(s) 27, 92, 122, 165, 188, 330
BmsI GCATC 1 cut(s) 337
BpiI GAAGAC 1 cut(s) 69
BpmI CTGGAG 1 cut(s) 291
BpuMI CCSGG 2 cut(s) 165, 330
BsaJI CCNNGG 2 cut(s) 520, 591
BsaWI WCCGGW 1 cut(s) 34
Bsc4I CCNNNNNNNGG 3 cut(s) 52, 164, 367
Bse1I ACTGG 2 cut(s) 274, 490
BseBI CCWGG 4 cut(s) 27, 92, 122, 188
BseDI CCNNGG 2 cut(s) 520, 591
BseGI GGATG 2 cut(s) 352, 651
BseLI CCNNNNNNNGG 3 cut(s) 52, 164, 367
BseMII CTCAG 1 cut(s) 276
BseNI ACTGG 2 cut(s) 274, 490
BseRI GAGGAG 2 cut(s) 288, 809
BseX3I CGGCCG 1 cut(s) 739
BseXI GCAGC 2 cut(s) 362, 539
Bsh1285I CGRYCG 1 cut(s) 742
BshFI GGCC 6 cut(s) 8, 107, 125, 212, 574, 741
BsiEI CGRYCG 1 cut(s) 742
BsiHKAI GWGCWC 1 cut(s) 262
BsiSI CCGG 3 cut(s) 35, 164, 330
BslFI GGGAC 1 cut(s) 601
BslI CCNNNNNNNGG 3 cut(s) 52, 164, 367
BsmAI GTCTC 1 cut(s) 362
BsmFI GGGAC 1 cut(s) 601
BsmI GAATGC 1 cut(s) 695
BsnI GGCC 6 cut(s) 8, 107, 125, 212, 574, 741
Bsp1286I GDGCHC 1 cut(s) 262
Bsp143I GATC 4 cut(s) 247, 616, 671, 760
Bsp19I CCATGG 1 cut(s) 591
BspACI CCGC 3 cut(s) 139, 659, 738
BspANI GGCC 6 cut(s) 8, 107, 125, 212, 574, 741
BspCNI CTCAG 1 cut(s) 277
BspHI TCATGA 1 cut(s) 396
BspLI GGNNCC 3 cut(s) 169, 202, 589
BspPI GGATC 1 cut(s) 624
BspQI GCTCTTC 1 cut(s) 267
BsrI ACTGG 2 cut(s) 274, 490
BssECI CCNNGG 2 cut(s) 520, 591
BssMI GATC 4 cut(s) 247, 616, 671, 760
BssT1I CCWWGG 2 cut(s) 520, 591
Bst2UI CCWGG 4 cut(s) 27, 92, 122, 188
Bst4CI ACNGT 2 cut(s) 379, 758
Bst6I CTCTTC 1 cut(s) 267
BstC8I GCNNGC 4 cut(s) 373, 636, 664, 668
BstDEI CTNAG 1 cut(s) 285
BstDSI CCRYGG 1 cut(s) 591
BstEII GGTNACC 1 cut(s) 16
BstF5I GGATG 2 cut(s) 352, 651
BstH2I RGCGCY 1 cut(s) 646
BstHHI GCGC 1 cut(s) 645
BstKTI GATC 4 cut(s) 250, 619, 674, 763
BstMAI GTCTC 1 cut(s) 362
BstMBI GATC 4 cut(s) 247, 616, 671, 760
BstMCI CGRYCG 1 cut(s) 742
BstMWI GCNNNNNNNGC 3 cut(s) 302, 640, 738
BstNI CCWGG 4 cut(s) 27, 92, 122, 188
BstNSI RCATGY 2 cut(s) 375, 806
BstPI GGTNACC 1 cut(s) 16
BstSCI CCNGG 6 cut(s) 25, 90, 120, 163, 186, 328
BstV1I GCAGC 2 cut(s) 362, 539
BstV2I GAAGAC 1 cut(s) 69
BstX2I RGATCY 1 cut(s) 616
BstXI CCANNNNNNTGG 2 cut(s) 662, 806
BstYI RGATCY 1 cut(s) 616
BstZI CGGCCG 1 cut(s) 739
BsuRI GGCC 6 cut(s) 8, 107, 125, 212, 574, 741
BtgI CCRYGG 1 cut(s) 591
BtrI CACGTC 1 cut(s) 111
BtsCI GGATG 2 cut(s) 352, 651
BtsIMutI CAGTG 3 cut(s) 113, 375, 763
Cac8I GCNNGC 4 cut(s) 373, 636, 664, 668
CciI TCATGA 1 cut(s) 396
CfoI GCGC 1 cut(s) 645
Cfr13I GGNCC 4 cut(s) 40, 88, 184, 588
CseI GACGC 1 cut(s) 560
CsiI ACCWGGT 1 cut(s) 25
CviAII CATG 5 cut(s) 372, 397, 592, 787, 803
DdeI CTNAG 1 cut(s) 285
DpnI GATC 4 cut(s) 249, 618, 673, 762
DpnII GATC 4 cut(s) 247, 616, 671, 760
DraI TTTAAA 1 cut(s) 558
DrdI GACNNNNNNGTC 1 cut(s) 86
DriI GACNNNNNGTC 1 cut(s) 38
DseDI GACNNNNNNGTC 1 cut(s) 86
EaeI YGGCCR 1 cut(s) 739
EagI CGGCCG 1 cut(s) 739
Eam1104I CTCTTC 1 cut(s) 267
Eam1105I GACNNNNNGTC 1 cut(s) 38
EarI CTCTTC 1 cut(s) 267
EclXI CGGCCG 1 cut(s) 739
Eco130I CCWWGG 2 cut(s) 520, 591
Eco147I AGGCCT 1 cut(s) 574
Eco32I GATATC 1 cut(s) 517
Eco47I GGWCC 4 cut(s) 40, 88, 184, 588
Eco52I CGGCCG 1 cut(s) 739
Eco91I GGTNACC 1 cut(s) 16
EcoO109I RGGNCCY 2 cut(s) 40, 88
EcoO65I GGTNACC 1 cut(s) 16
EcoRII CCWGG 4 cut(s) 25, 90, 120, 186
EcoRV GATATC 1 cut(s) 517
EcoT14I CCWWGG 2 cut(s) 520, 591
ErhI CCWWGG 2 cut(s) 520, 591
FaeI CATG 5 cut(s) 375, 400, 595, 790, 806
FaqI GGGAC 1 cut(s) 601
FatI CATG 5 cut(s) 371, 396, 591, 786, 802
FblI GTMKAC 2 cut(s) 31, 406
Fnu4HI GCNGC 5 cut(s) 140, 351, 528, 660, 739
FokI GGATG 2 cut(s) 359, 638
Fsp4HI GCNGC 5 cut(s) 140, 351, 528, 660, 739
FspBI CTAG 2 cut(s) 354, 675
GlaI GCGC 1 cut(s) 644
GluI GCNGC 5 cut(s) 140, 351, 528, 660, 739
GsuI CTGGAG 1 cut(s) 291
HaeII RGCGCY 1 cut(s) 646
HaeIII GGCC 6 cut(s) 8, 107, 125, 212, 574, 741
HapII CCGG 3 cut(s) 35, 164, 330
HgaI GACGC 1 cut(s) 560
HhaI GCGC 1 cut(s) 645
Hin1II CATG 5 cut(s) 375, 400, 595, 790, 806
Hin6I GCGC 1 cut(s) 643
HinP1I GCGC 1 cut(s) 643
HincII GTYRAC 1 cut(s) 407
HindII GTYRAC 1 cut(s) 407
HinfI GANTC 1 cut(s) 403
HpaII CCGG 3 cut(s) 35, 164, 330
HphI GGTGA 3 cut(s) 15, 640, 761
Hpy166II GTNNAC 2 cut(s) 32, 407
Hpy188III TCNNGA 4 cut(s) 397, 448, 675, 683
Hpy8I GTNNAC 2 cut(s) 32, 407
Hpy99I CGWCG 3 cut(s) 86, 218, 248
HpyAV CCTTC 2 cut(s) 283, 337
HpyCH4III ACNGT 2 cut(s) 379, 758
HpyCH4IV ACGT 1 cut(s) 110
HpyCH4V TGCA 3 cut(s) 350, 375, 732
HpyF10VI GCNNNNNNNGC 3 cut(s) 302, 640, 738
HpyF3I CTNAG 1 cut(s) 285
HpySE526I ACGT 1 cut(s) 110
Hsp92II CATG 5 cut(s) 375, 400, 595, 790, 806
HspAI GCGC 1 cut(s) 643
Kzo9I GATC 4 cut(s) 247, 616, 671, 760
LguI GCTCTTC 1 cut(s) 267
Lsp1109I GCAGC 2 cut(s) 362, 539
LweI GCATC 1 cut(s) 337
MabI ACCWGGT 1 cut(s) 25
MaeI CTAG 2 cut(s) 354, 675
MaeII ACGT 1 cut(s) 110
MaeIII GTNAC 5 cut(s) 16, 111, 228, 433, 707
MalI GATC 4 cut(s) 249, 618, 673, 762
MboI GATC 4 cut(s) 247, 616, 671, 760
MboII GAAGA 5 cut(s) 74, 254, 308, 405, 491
MfeI CAATTG 1 cut(s) 733
MflI RGATCY 1 cut(s) 616
MhlI GDGCHC 1 cut(s) 262
MluCI AATT 5 cut(s) 47, 312, 611, 621, 733
MlyI GAGTC 1 cut(s) 412
MmeI TCCRAC 1 cut(s) 787
MseI TTAA 1 cut(s) 557
MspA1I CMGCKG 2 cut(s) 139, 305
MspI CCGG 3 cut(s) 35, 164, 330
MspR9I CCNGG 6 cut(s) 27, 92, 122, 165, 188, 330
MunI CAATTG 1 cut(s) 733
Mva1269I GAATGC 1 cut(s) 695
MvaI CCWGG 4 cut(s) 27, 92, 122, 188
MwoI GCNNNNNNNGC 3 cut(s) 302, 640, 738
NciI CCSGG 2 cut(s) 165, 330
NcoI CCATGG 1 cut(s) 591
NdeII GATC 4 cut(s) 247, 616, 671, 760
NlaIII CATG 5 cut(s) 375, 400, 595, 790, 806
NlaIV GGNNCC 3 cut(s) 169, 202, 589
NmeAIII GCCGAG 1 cut(s) 123
NmuCI GTSAC 3 cut(s) 111, 228, 707
NspI RCATGY 2 cut(s) 375, 806
PaeI GCATGC 1 cut(s) 375
PagI TCATGA 1 cut(s) 396
PceI AGGCCT 1 cut(s) 574
PciI ACATGT 1 cut(s) 802
PciSI GCTCTTC 1 cut(s) 267
PctI GAATGC 1 cut(s) 695
PflFI GACNNNGTC 1 cut(s) 86
PkrI GCNGC 5 cut(s) 141, 352, 529, 661, 740
PleI GAGTC 1 cut(s) 411
PpsI GAGTC 1 cut(s) 411
PpuMI RGGWCCY 2 cut(s) 40, 88
PscI ACATGT 1 cut(s) 802
Psp5II RGGWCCY 2 cut(s) 40, 88
Psp6I CCWGG 4 cut(s) 25, 90, 120, 186
PspEI GGTNACC 1 cut(s) 16
PspGI CCWGG 4 cut(s) 25, 90, 120, 186
PspN4I GGNNCC 3 cut(s) 169, 202, 589
PspPI GGNCC 4 cut(s) 40, 88, 184, 588
PspPPI RGGWCCY 2 cut(s) 40, 88
PsuI RGATCY 1 cut(s) 616
PsyI GACNNNGTC 1 cut(s) 86
PvuII CAGCTG 1 cut(s) 305
SalI GTCGAC 1 cut(s) 405
SapI GCTCTTC 1 cut(s) 267
SaqAI TTAA 1 cut(s) 557
SatI GCNGC 5 cut(s) 140, 351, 528, 660, 739
Sau3AI GATC 4 cut(s) 247, 616, 671, 760
Sau96I GGNCC 4 cut(s) 40, 88, 184, 588
SchI GAGTC 1 cut(s) 412
ScrFI CCNGG 6 cut(s) 27, 92, 122, 165, 188, 330
SduI GDGCHC 1 cut(s) 262
SexAI ACCWGGT 1 cut(s) 25
SfaNI GCATC 1 cut(s) 337
SinI GGWCC 4 cut(s) 40, 88, 184, 588
SphI GCATGC 1 cut(s) 375
Sse9I AATT 5 cut(s) 47, 312, 611, 621, 733
SseBI AGGCCT 1 cut(s) 574
SsiI CCGC 3 cut(s) 139, 659, 738
SspI AATATT 1 cut(s) 426
SspMI CTAG 2 cut(s) 354, 675
StuI AGGCCT 1 cut(s) 574
StyD4I CCNGG 6 cut(s) 25, 90, 120, 163, 186, 328
StyI CCWWGG 2 cut(s) 520, 591
TaaI ACNGT 2 cut(s) 379, 758
TaiI ACGT 1 cut(s) 113
TaqI TCGA 4 cut(s) 102, 207, 406, 682
TasI AATT 5 cut(s) 47, 312, 611, 621, 733
TauI GCSGC 3 cut(s) 142, 662, 741
Tru1I TTAA 1 cut(s) 557
Tru9I TTAA 1 cut(s) 557
TscAI CASTG 3 cut(s) 120, 382, 763
TseFI GTSAC 3 cut(s) 111, 228, 707
TseI GCWGC 2 cut(s) 350, 527
Tsp45I GTSAC 3 cut(s) 111, 228, 707
TspDTI ATGAA 3 cut(s) 17, 385, 688
TspGWI ACGGA 2 cut(s) 467, 816
TspRI CASTG 3 cut(s) 120, 382, 763
Tth111I GACNNNGTC 1 cut(s) 86
VpaK11BI GGWCC 4 cut(s) 40, 88, 184, 588
XapI RAATTY 1 cut(s) 312
XbaI TCTAGA 1 cut(s) 674
XceI RCATGY 2 cut(s) 375, 806
XcmI CCANNNNNNNNNTGG 1 cut(s) 178
XmiI GTMKAC 2 cut(s) 31, 406
XspI CTAG 2 cut(s) 354, 675
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.