RLG00000031422

quinone oxidoreductase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
5028602 .. 5030857
2256 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031422

Sequence Viewer

Length: 918 bp
ATGAAGGCGGTAGTGATAACAACCCCCGGCGGACCGGAGGTCCTCCGAGTACAAGAAGTAGAGGACCCAGAAATCAAAGACGACGAGGTTCTTATCAAAGTCGCGGCCACCGCGCTGAACCGAGCCGACACTTTTCAGAGGAAGGGACTCTACGCACCACCTCCGGGGTGCAGTCCGTACCTCGGCGTCGAATGTTCTGGAACCATCGAGGCCGTCGGGAAACACGTGTCGAGATGGAAAGTGGGCGATCAGGTGTGTGCTTTACTTAATGGAGGAGGGCATGCTGAGAAGGCGGCTGTTCCGGCGGGCCAGGTTCTTCCGGTTCCACCTGGGATATCTTTGAAGGATGCTGCGAGCTTTCCGGAGGTGGCGTGCACTGTCTGGTCCACTATTTTTATGATGAGCCGGCTATCTTCGGGCGAAACACTTTTGGTTATTGATGTTGGATCATCAGGTAGTGAGGAAAAGTTAGCAGCTTGTAAGGAGCTTGGGGCTGACGTGGGTATCAATTACAAGACGGAGGACTTTGTTACACGGGTGAAGGAAGAGACAGGCGGCAAAGGTGTTGATGTCATCTTGGATAGCGTTGGGCAAGCCTATTTTAAACGTAACCTTGATACCTTAGCTTTTGATGGGAGGCTTTTTGTCATTGGGACCCTGAGTGGTGCTGTCTCAGAAATAGATCTTCGTGGTGTGCTTTCAAAGCGCCTCACCATCCAAGCGGCTGGTTTGCGATTCAGAAGTCCAGAAAACAAAGCTGTAATTGTTAGAGAGGTGGAGGAAAACGTGTGGCCTGCAATTGTGGTTGGCAAGGTGAAACCTGTTGTCTACAAGCGTTTCCCATTATCTGAAGCCGCTGAGGCTCACCAGCTGATGGAAACTAGCCAGCATATTGGAAAGATACTACTTTTTCCGTGA

Protein Analysis

306

Amino Acids

32.62

Weight (kDa)

5.73

Isoelectric Point (pI)

46.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 27 - 109 1.9e-16 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N PF00107 148 - 243 1.1e-22 Zinc-binding dehydrogenase
ADH_zinc_N_2 PF13602 163 - 303 5.6e-25 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000394)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21580
fragaria_vesca FvH4_3g02190 FvH4_3g02190 FvH4_3g02190 FvH4_3g04320 FvH4_3g04340 FvH4_3g18080 FvH4_3g18080 FvH4_3g18080 FvH4_6g30490 FvH4_6g30490 FvH4_6g30490 FvH4_6g30490
malus_domestica MD05G1217800.v1.1 MD05G1323900.v1.1 MD12G1074500.v1.1 MD14G1066500.v1.1
prunus_persica Prupe.4G038700_v2.0.a1 Prupe.7G059000_v2.0.a1 Prupe.7G059000_v2.0.a1 Prupe.7G059300_v2.0.a1 Prupe.7G059300_v2.0.a1 Prupe.7G059300_v2.0.a1 Prupe.7G059300_v2.0.a1
pyrus_communis pycom05g29820
rosa_chinensis RchiOBHm_Chr1g0318171 RchiOBHm_Chr5g0003241 RchiOBHm_Chr5g0006701 RchiOBHm_Chr5g0006721 RchiOBHm_Chr5g0006731 RchiOBHm_Chr5g0030211 RchiOBHm_Chr5g0030291 RchiOBHm_Chr5g0030331 RchiOBHm_Chr5g0030371 RchiOBHm_Chr5g0030401 RchiOBHm_Chr5g0030471
rosa_laevigata RLG00000025923 RLG00000025924 RLG00000030556 RLG00000031088 RLG00000031336 RLG00000031418 RLG00000031420 RLG00000031421 RLG00000031422 RLG00000031423 RLG00000033220
rosa_multiflora Rmu_sc0001886.1_g000010 Rmu_sc0001886.1_g000011 Rmu_sc0001886.1_g000012 Rmu_sc0010917.1_g000018 Rmu_sc0011424.1_g000013 Rmu_sc0017347.1_g000003 Rmu_sc0017347.1_g000005 Rmu_sc0018387.1_g000006 Rmu_sc0018387.1_g000008
rosa_roxburghii Rroxscaffold_1G00049810 Rroxscaffold_1G00069320 Rroxscaffold_1G00072770 Rroxscaffold_4G00329990 Rroxscaffold_6G00426520
rosa_rugosa Rorug01G0019200 Rorug01G0019300 Rorug01G0019400 Rorug02G0611300 Rorug02G0611400 Rorug04G0401400 Rorug04G0423700 Rorug04G0424000 Rorug05G0118000
rosa_samantha Rh1CG030000 Rh1DG040100 Rh2DG133300 Rh3AG010300 Rh3BG010000 Rh3DG010500 Rh5AG026800 Rh5AG026900 Rh5AG027800 Rh5AG051600 Rh5AG051800 Rh5BG028000 Rh5BG050700 Rh5BG129800 Rh5BG129900 Rh5CG029400 Rh5CG029500 Rh5CG030100 Rh5CG059100 Rh5CG059300 Rh5CG059400 Rh5DG026200 Rh5DG049800 Rh5DG049900 Rh5DG214000
rosa_wichuraiana Rw1G002510 Rw5G002450 Rw5G002640 Rw5G004650 Rw5G005260 Rw5G005270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 874
AccI GTMKAC 1 cut(s) 828
AccII CGCG 2 cut(s) 104, 113
AccIII TCCGGA 1 cut(s) 361
AciI CCGC 9 cut(s) 8, 30, 104, 111, 293, 305, 555, 722, 855
AclWI GGATC 1 cut(s) 454
AcoI YGGCCR 1 cut(s) 105
AcuI CTGAAG 1 cut(s) 870
AcvI CACGTG 1 cut(s) 226
AcyI GRCGYC 1 cut(s) 186
AfaI GTAC 2 cut(s) 51, 179
AfiI CCNNNNNNNGG 3 cut(s) 164, 182, 874
AflIII ACRYGT 3 cut(s) 223, 225, 786
AgsI TTSAA 2 cut(s) 343, 702
AhdI GACNNNNNGTC 1 cut(s) 38
AjiI CACGTC 1 cut(s) 499
AjnI CCWGG 2 cut(s) 309, 328
AluBI AGCT 6 cut(s) 357, 476, 487, 626, 758, 871
AluI AGCT 6 cut(s) 357, 476, 487, 626, 758, 871
Alw21I GWGCWC 1 cut(s) 377
Alw26I GTCTC 2 cut(s) 542, 676
Alw44I GTGCAC 1 cut(s) 373
AlwI GGATC 1 cut(s) 454
Aor13HI TCCGGA 1 cut(s) 361
AoxI GGCC 4 cut(s) 105, 210, 307, 791
ApaLI GTGCAC 1 cut(s) 373
ApeKI GCWGC 2 cut(s) 350, 473
AspLEI GCGC 2 cut(s) 115, 708
AspS9I GGNCC 6 cut(s) 32, 40, 64, 307, 384, 654
AsuC2I CCSGG 2 cut(s) 27, 165
AsuHPI GGTGA 4 cut(s) 550, 703, 826, 857
AvaII GGWCC 5 cut(s) 32, 40, 64, 384, 654
BaeGI GKGCMC 1 cut(s) 377
BaeI ACNNNNGTAYC 2 cut(s) 487, 520
BarI GAAGNNNNNNTAC 2 cut(s) 134, 166
BbrPI CACGTG 1 cut(s) 226
Bbv12I GWGCWC 1 cut(s) 377
BbvCI CCTCAGC 1 cut(s) 858
BbvI GCAGC 2 cut(s) 337, 485
BccI CCATC 5 cut(s) 212, 228, 626, 722, 868
BceAI ACGGC 1 cut(s) 197
BciT130I CCWGG 2 cut(s) 311, 330
BcnI CCSGG 2 cut(s) 27, 165
BcoDI GTCTC 2 cut(s) 542, 676
BfaI CTAG 1 cut(s) 882
BfoI RGCGCY 1 cut(s) 709
BglI GCCNNNNNGGC 1 cut(s) 860
BglII AGATCT 1 cut(s) 682
BisI GCNGC 7 cut(s) 105, 294, 351, 474, 556, 723, 855
BlsI GCNGC 7 cut(s) 106, 295, 352, 475, 557, 724, 856
Bme1390I CCNGG 4 cut(s) 27, 165, 311, 330
Bme18I GGWCC 5 cut(s) 32, 40, 64, 384, 654
BmeRI GACNNNNNGTC 1 cut(s) 38
BmgBI CACGTC 1 cut(s) 499
BmgT120I GGNCC 6 cut(s) 32, 40, 64, 307, 384, 654
BmiI GGNNCC 5 cut(s) 66, 202, 324, 655, 656
BmrFI CCNGG 4 cut(s) 27, 165, 311, 330
BmsI GCATC 1 cut(s) 337
Bpu10I CCTNAGC 2 cut(s) 622, 858
BpuMI CCSGG 2 cut(s) 27, 165
BsaAI YACGTR 1 cut(s) 226
BsaHI GRCGYC 1 cut(s) 186
BsaJI CCNNGG 4 cut(s) 25, 164, 181, 329
BsaWI WCCGGW 3 cut(s) 34, 319, 361
BsaXI ACNNNNNCTCC 2 cut(s) 356, 386
Bsc4I CCNNNNNNNGG 3 cut(s) 164, 182, 874
Bse118I RCCGGY 1 cut(s) 405
BseAI TCCGGA 1 cut(s) 361
BseBI CCWGG 2 cut(s) 311, 330
BseDI CCNNGG 4 cut(s) 25, 164, 181, 329
BseGI GGATG 2 cut(s) 352, 714
BseLI CCNNNNNNNGG 3 cut(s) 164, 182, 874
BseMII CTCAG 4 cut(s) 276, 650, 687, 849
BseRI GAGGAG 1 cut(s) 288
BseSI GKGCMC 1 cut(s) 377
BseXI GCAGC 2 cut(s) 337, 485
BsgI GTGCAG 1 cut(s) 190
Bsh1236I CGCG 2 cut(s) 104, 113
BshFI GGCC 4 cut(s) 107, 212, 309, 793
BsiHKAI GWGCWC 1 cut(s) 377
BsiSI CCGG 7 cut(s) 27, 35, 164, 302, 320, 362, 406
BslFI GGGAC 2 cut(s) 159, 667
BslI CCNNNNNNNGG 3 cut(s) 164, 182, 874
BsmAI GTCTC 2 cut(s) 542, 676
BsmFI GGGAC 2 cut(s) 159, 667
BsnI GGCC 4 cut(s) 107, 212, 309, 793
Bsp1286I GDGCHC 1 cut(s) 377
Bsp13I TCCGGA 1 cut(s) 361
Bsp143I GATC 3 cut(s) 247, 446, 682
BspACI CCGC 9 cut(s) 8, 30, 104, 111, 293, 305, 555, 722, 855
BspANI GGCC 4 cut(s) 107, 212, 309, 793
BspCNI CTCAG 4 cut(s) 277, 651, 686, 850
BspEI TCCGGA 1 cut(s) 361
BspFNI CGCG 2 cut(s) 104, 113
BspLI GGNNCC 5 cut(s) 66, 202, 324, 655, 656
BspPI GGATC 1 cut(s) 454
BsrFI RCCGGY 1 cut(s) 405
BssAI RCCGGY 1 cut(s) 405
BssECI CCNNGG 4 cut(s) 25, 164, 181, 329
BssMI GATC 3 cut(s) 247, 446, 682
BssNI GRCGYC 1 cut(s) 186
Bst2UI CCWGG 2 cut(s) 311, 330
Bst4CI ACNGT 1 cut(s) 379
Bst6I CTCTTC 1 cut(s) 540
BstACI GRCGYC 1 cut(s) 186
BstBAI YACGTR 1 cut(s) 226
BstC8I GCNNGC 8 cut(s) 282, 307, 355, 373, 407, 594, 795, 887
BstDEI CTNAG 5 cut(s) 285, 622, 659, 673, 858
BstF5I GGATG 2 cut(s) 352, 714
BstFNI CGCG 2 cut(s) 104, 113
BstH2I RGCGCY 1 cut(s) 709
BstHHI GCGC 2 cut(s) 115, 708
BstKTI GATC 3 cut(s) 250, 449, 685
BstMAI GTCTC 2 cut(s) 542, 676
BstMBI GATC 3 cut(s) 247, 446, 682
BstMWI GCNNNNNNNGC 5 cut(s) 110, 290, 302, 703, 860
BstNI CCWGG 2 cut(s) 311, 330
BstNSI RCATGY 1 cut(s) 284
BstSCI CCNGG 4 cut(s) 25, 163, 309, 328
BstSLI GKGCMC 1 cut(s) 377
BstUI CGCG 2 cut(s) 104, 113
BstV1I GCAGC 2 cut(s) 337, 485
BstX2I RGATCY 1 cut(s) 682
BstXI CCANNNNNNTGG 2 cut(s) 725, 893
BstYI RGATCY 1 cut(s) 682
BsuRI GGCC 4 cut(s) 107, 212, 309, 793
BtrI CACGTC 1 cut(s) 499
BtsCI GGATG 2 cut(s) 352, 714
BtsIMutI CAGTG 1 cut(s) 375
Cac8I GCNNGC 8 cut(s) 282, 307, 355, 373, 407, 594, 795, 887
CfoI GCGC 2 cut(s) 115, 708
Cfr10I RCCGGY 1 cut(s) 405
Cfr13I GGNCC 6 cut(s) 32, 40, 64, 307, 384, 654
CpoI CGGWCCG 1 cut(s) 32
CseI GACGC 1 cut(s) 175
Csp6I GTAC 2 cut(s) 50, 178
CspI CGGWCCG 1 cut(s) 32
CviAII CATG 1 cut(s) 281
CviQI GTAC 2 cut(s) 50, 178
DdeI CTNAG 5 cut(s) 285, 622, 659, 673, 858
DpnI GATC 3 cut(s) 249, 448, 684
DpnII GATC 3 cut(s) 247, 446, 682
DraI TTTAAA 1 cut(s) 604
DriI GACNNNNNGTC 1 cut(s) 38
EaeI YGGCCR 1 cut(s) 105
Eam1104I CTCTTC 1 cut(s) 540
Eam1105I GACNNNNNGTC 1 cut(s) 38
EarI CTCTTC 1 cut(s) 540
EciI GGCGGA 1 cut(s) 45
Eco32I GATATC 1 cut(s) 336
Eco47I GGWCC 5 cut(s) 32, 40, 64, 384, 654
Eco57I CTGAAG 1 cut(s) 870
Eco72I CACGTG 1 cut(s) 226
EcoO109I RGGNCCY 3 cut(s) 40, 64, 654
EcoRII CCWGG 2 cut(s) 309, 328
EcoRV GATATC 1 cut(s) 336
FaeI CATG 1 cut(s) 284
FaiI YATR 3 cut(s) 282, 398, 891
FaqI GGGAC 2 cut(s) 159, 667
FatI CATG 1 cut(s) 280
FauI CCCGC 1 cut(s) 298
FblI GTMKAC 1 cut(s) 828
Fnu4HI GCNGC 7 cut(s) 105, 294, 351, 474, 556, 723, 855
FokI GGATG 2 cut(s) 359, 701
Fsp4HI GCNGC 7 cut(s) 105, 294, 351, 474, 556, 723, 855
FspBI CTAG 1 cut(s) 882
GlaI GCGC 2 cut(s) 114, 707
GluI GCNGC 7 cut(s) 105, 294, 351, 474, 556, 723, 855
HaeII RGCGCY 1 cut(s) 709
HaeIII GGCC 4 cut(s) 107, 212, 309, 793
HapII CCGG 7 cut(s) 27, 35, 164, 302, 320, 362, 406
HgaI GACGC 1 cut(s) 175
HhaI GCGC 2 cut(s) 115, 708
Hin1I GRCGYC 1 cut(s) 186
Hin1II CATG 1 cut(s) 284
Hin6I GCGC 2 cut(s) 113, 706
HinP1I GCGC 2 cut(s) 113, 706
HinfI GANTC 2 cut(s) 147, 735
HpaII CCGG 7 cut(s) 27, 35, 164, 302, 320, 362, 406
HphI GGTGA 4 cut(s) 550, 703, 826, 857
Hpy166II GTNNAC 3 cut(s) 375, 387, 829
Hpy188I TCNGA 5 cut(s) 47, 138, 676, 740, 850
Hpy188III TCNNGA 5 cut(s) 198, 217, 231, 362, 746
Hpy8I GTNNAC 3 cut(s) 375, 387, 829
Hpy99I CGWCG 3 cut(s) 86, 191, 218
HpyAV CCTTC 4 cut(s) 136, 283, 337, 535
HpyCH4III ACNGT 1 cut(s) 379
HpyCH4IV ACGT 4 cut(s) 225, 498, 607, 786
HpyCH4V TGCA 3 cut(s) 171, 375, 797
HpyF10VI GCNNNNNNNGC 5 cut(s) 110, 290, 302, 703, 860
HpyF3I CTNAG 5 cut(s) 285, 622, 659, 673, 858
HpySE526I ACGT 4 cut(s) 225, 498, 607, 786
Hsp92I GRCGYC 1 cut(s) 186
Hsp92II CATG 1 cut(s) 284
HspAI GCGC 2 cut(s) 113, 706
KflI GGGWCCC 1 cut(s) 654
Kpn2I TCCGGA 1 cut(s) 361
KroI GCCGGC 1 cut(s) 405
KroNI GCCGGC 1 cut(s) 407
Kzo9I GATC 3 cut(s) 247, 446, 682
LmnI GCTCC 1 cut(s) 484
Lsp1109I GCAGC 2 cut(s) 337, 485
LweI GCATC 1 cut(s) 337
MaeI CTAG 1 cut(s) 882
MaeII ACGT 4 cut(s) 225, 498, 607, 786
MaeIII GTNAC 2 cut(s) 529, 608
MalI GATC 3 cut(s) 249, 448, 684
MboI GATC 3 cut(s) 247, 446, 682
MboII GAAGA 4 cut(s) 308, 405, 557, 677
MfeI CAATTG 1 cut(s) 798
MflI RGATCY 1 cut(s) 682
MhlI GDGCHC 1 cut(s) 377
MluCI AATT 3 cut(s) 508, 762, 798
MlyI GAGTC 1 cut(s) 141
MmeI TCCRAC 1 cut(s) 424
MroI TCCGGA 1 cut(s) 361
MroNI GCCGGC 1 cut(s) 405
MseI TTAA 2 cut(s) 267, 603
MspA1I CMGCKG 2 cut(s) 857, 871
MspI CCGG 7 cut(s) 27, 35, 164, 302, 320, 362, 406
MspR9I CCNGG 4 cut(s) 27, 165, 311, 330
MunI CAATTG 1 cut(s) 798
MvaI CCWGG 2 cut(s) 311, 330
MvnI CGCG 2 cut(s) 104, 113
MwoI GCNNNNNNNGC 5 cut(s) 110, 290, 302, 703, 860
NaeI GCCGGC 1 cut(s) 407
NciI CCSGG 2 cut(s) 27, 165
NdeII GATC 3 cut(s) 247, 446, 682
NgoMIV GCCGGC 1 cut(s) 405
NlaIII CATG 1 cut(s) 284
NlaIV GGNNCC 5 cut(s) 66, 202, 324, 655, 656
NmeAIII GCCGAG 1 cut(s) 162
NspI RCATGY 1 cut(s) 284
PaeI GCATGC 1 cut(s) 284
PcsI WCGNNNNNNNCGW 1 cut(s) 222
PdiI GCCGGC 1 cut(s) 407
PfeI GAWTC 1 cut(s) 735
PflMI CCANNNNNTGG 1 cut(s) 874
PkrI GCNGC 7 cut(s) 106, 295, 352, 475, 557, 724, 856
PleI GAGTC 1 cut(s) 141
PmaCI CACGTG 1 cut(s) 226
PmlI CACGTG 1 cut(s) 226
PpsI GAGTC 1 cut(s) 141
Ppu21I YACGTR 1 cut(s) 226
PpuMI RGGWCCY 3 cut(s) 40, 64, 654
Psp5II RGGWCCY 3 cut(s) 40, 64, 654
Psp6I CCWGG 2 cut(s) 309, 328
PspCI CACGTG 1 cut(s) 226
PspGI CCWGG 2 cut(s) 309, 328
PspN4I GGNNCC 5 cut(s) 66, 202, 324, 655, 656
PspPI GGNCC 6 cut(s) 32, 40, 64, 307, 384, 654
PspPPI RGGWCCY 3 cut(s) 40, 64, 654
PsuI RGATCY 1 cut(s) 682
PvuII CAGCTG 1 cut(s) 871
RsaI GTAC 2 cut(s) 51, 179
RsaNI GTAC 2 cut(s) 50, 178
Rsr2I CGGWCCG 1 cut(s) 32
RsrII CGGWCCG 1 cut(s) 32
SaqAI TTAA 2 cut(s) 267, 603
SatI GCNGC 7 cut(s) 105, 294, 351, 474, 556, 723, 855
Sau3AI GATC 3 cut(s) 247, 446, 682
Sau96I GGNCC 6 cut(s) 32, 40, 64, 307, 384, 654
SchI GAGTC 1 cut(s) 141
ScrFI CCNGG 4 cut(s) 27, 165, 311, 330
SduI GDGCHC 1 cut(s) 377
SfaNI GCATC 1 cut(s) 337
SinI GGWCC 5 cut(s) 32, 40, 64, 384, 654
SphI GCATGC 1 cut(s) 284
Sse9I AATT 3 cut(s) 508, 762, 798
SsiI CCGC 9 cut(s) 8, 30, 104, 111, 293, 305, 555, 722, 855
SspMI CTAG 1 cut(s) 882
StyD4I CCNGG 4 cut(s) 25, 163, 309, 328
TaaI ACNGT 1 cut(s) 379
TaiI ACGT 4 cut(s) 228, 501, 610, 789
TaqI TCGA 3 cut(s) 189, 207, 230
TasI AATT 3 cut(s) 508, 762, 798
TatI WGTACW 1 cut(s) 49
TauI GCSGC 5 cut(s) 107, 296, 558, 725, 857
TfiI GAWTC 1 cut(s) 735
Tru1I TTAA 2 cut(s) 267, 603
Tru9I TTAA 2 cut(s) 267, 603
TscAI CASTG 1 cut(s) 382
TseI GCWGC 2 cut(s) 350, 473
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 3 cut(s) 165, 533, 903
TspRI CASTG 1 cut(s) 382
Van91I CCANNNNNTGG 1 cut(s) 874
VneI GTGCAC 1 cut(s) 373
VpaK11BI GGWCC 5 cut(s) 32, 40, 64, 384, 654
XceI RCATGY 1 cut(s) 284
XmiI GTMKAC 1 cut(s) 828
XspI CTAG 1 cut(s) 882
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.