Rorug02G0611400

quinone oxidoreductase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
72770179 .. 72773100
2922 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0611400.1

Sequence Viewer

Length: 1599 bp
ATGTTGAGGAAATGGGTTTCTTTGGTTCTGATCTTTGTGATTCTCTCTGGGGACTTTTCATCAGCTTCAGCCACACCTCCTCCTGCAAAAATTGTAACTGGGATTGTCTCCAATGTGGTATCTGCTCTTGTTAAATGGCTCTGGTCACTGAAATCCACCACCAAAACCAGCACAGCGGTTTCTGGCCGTTCAATGGTGAAATTTGAGGGTGGATATACTGTAGATACGGTTTTCGATGGAAGTAAGCTTGGGATTGAACCGCACTCCATTGAAGTATCCCCAAGTGGAGAGCTTCTGGTTTTGGATTCTGAAAATAGTAACATCTACAGGATTTCAACACCATTATCTAAATATAGCCGACCCAAGCTCATAGCTGGGTCACCTGAAGGCTACTCGGGGCATGTAGATGGGAGGACAAGAGAAGCAAGAATGAACCACCCCAAAGGAATGACTATGGATGACAGTGGAAATATTTATATTGCAGACACAATGAATATGGCTATCAGGAAGATAAGTGATGCTGGTGTTACTACTATTGCTGGTGGAAAATGGGGCCGAGGAGGTGGTCATGTTGATGGTCCAAGTGAAGATGCAAAGTTTTCTAGTGATTTTGATGTGGTTTATATTGGAAGTAGCTGCTCTCTTTTGGTTATAGACAGAGGAAACCAGGCAATTCGGGAGATCCAACTCCACTATGATGACTGTGCTGACCACCATGATGGCAGTTTCCATTTAGGAGTAGCAGTGCTGCTTGCAGCTGCATTCTTTGGTTACATGCTGGCATTGTTGCAGCGTCGAGTGCAAGCAATATTTTCATCAAAGGATGACCAAACAACTGCTGCTATAAAGAGAGCTGCATCAATGGCTCAATACCAGATGCCTCCTAAATCTGTTAGGCCCCCTTTAATTCCCACTGAATATGAACCCGAAAAACCAGATGATGGCTTCTTTGGTTCACTTGGGAAGATGTTTCTCAATACTGGCTCATCTGTGGGTGAAATCGTTGGGGGATTGTTTTCAGGTAGAAGAAAGTCCCTCCATTATCAGATTCAACAGCAGTATCATCAAACTCACAGAAGTTCAAATCCATGGCCTGTGCAAGACAGCTTTGTGATTCCAGATGATGAGCCTCCTCCACCATCCATAGAGGCTAGAACCCCAACTCCAAAGAAAACCTACCCAGTCATGACTAAAGAACTGGAGATCCCCCGCCATTCTAAGCAAAGTCGAGCCTACTATAATTCATGGGATGGTGAATATAACCAACAGCAACAACATCAGATGCAAATGCAGATGCAGATGCAGCAACAGCAACAGCAACAGCAACAGCAACAACACCAGATGCATTTGCAGATGCAGCGCCAGCAGCAACAACAGCAGCAGCAGCAGCATCATCATAGGCATTACTCATCCAACCCAAAGACATACTACGAGAGGAGCAGTGAGACTAATGAGATTGTGTTTGGGGCGGTTCAAGAACAAGGTGGACGTCGTGAAGCTGTGGTGATAAAGGCTGTAGACTATTCTGACCCTACATATAATCACTACAACATTCGACCACGAGGCAATTATACTGATTATAGTTCCCCTGGTTATTGA

Protein Analysis

532

Amino Acids

59.64

Weight (kDa)

7.81

Isoelectric Point (pI)

52.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000394)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21580
fragaria_vesca FvH4_3g02190 FvH4_3g02190 FvH4_3g02190 FvH4_3g04320 FvH4_3g04340 FvH4_3g18080 FvH4_3g18080 FvH4_3g18080 FvH4_6g30490 FvH4_6g30490 FvH4_6g30490 FvH4_6g30490
malus_domestica MD05G1217800.v1.1 MD05G1323900.v1.1 MD12G1074500.v1.1 MD14G1066500.v1.1
prunus_persica Prupe.4G038700_v2.0.a1 Prupe.7G059000_v2.0.a1 Prupe.7G059000_v2.0.a1 Prupe.7G059300_v2.0.a1 Prupe.7G059300_v2.0.a1 Prupe.7G059300_v2.0.a1 Prupe.7G059300_v2.0.a1
pyrus_communis pycom05g29820
rosa_chinensis RchiOBHm_Chr1g0318171 RchiOBHm_Chr5g0003241 RchiOBHm_Chr5g0006701 RchiOBHm_Chr5g0006721 RchiOBHm_Chr5g0006731 RchiOBHm_Chr5g0030211 RchiOBHm_Chr5g0030291 RchiOBHm_Chr5g0030331 RchiOBHm_Chr5g0030371 RchiOBHm_Chr5g0030401 RchiOBHm_Chr5g0030471
rosa_laevigata RLG00000025923 RLG00000025924 RLG00000030556 RLG00000031088 RLG00000031336 RLG00000031418 RLG00000031420 RLG00000031421 RLG00000031422 RLG00000031423 RLG00000033220
rosa_multiflora Rmu_sc0001886.1_g000010 Rmu_sc0001886.1_g000011 Rmu_sc0001886.1_g000012 Rmu_sc0010917.1_g000018 Rmu_sc0011424.1_g000013 Rmu_sc0017347.1_g000003 Rmu_sc0017347.1_g000005 Rmu_sc0018387.1_g000006 Rmu_sc0018387.1_g000008
rosa_roxburghii Rroxscaffold_1G00049810 Rroxscaffold_1G00069320 Rroxscaffold_1G00072770 Rroxscaffold_4G00329990 Rroxscaffold_6G00426520
rosa_rugosa Rorug01G0019200 Rorug01G0019300 Rorug01G0019400 Rorug02G0611300 Rorug02G0611400 Rorug04G0401400 Rorug04G0423700 Rorug04G0424000 Rorug05G0118000
rosa_samantha Rh1CG030000 Rh1DG040100 Rh2DG133300 Rh3AG010300 Rh3BG010000 Rh3DG010500 Rh5AG026800 Rh5AG026900 Rh5AG027800 Rh5AG051600 Rh5AG051800 Rh5BG028000 Rh5BG050700 Rh5BG129800 Rh5BG129900 Rh5CG029400 Rh5CG029500 Rh5CG030100 Rh5CG059100 Rh5CG059300 Rh5CG059400 Rh5DG026200 Rh5DG049800 Rh5DG049900 Rh5DG214000
rosa_wichuraiana Rw1G002510 Rw5G002450 Rw5G002640 Rw5G004650 Rw5G005260 Rw5G005270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1492
AccB7I CCANNNNNTGG 1 cut(s) 941
AccI GTMKAC 1 cut(s) 1518
AciI CCGC 4 cut(s) 176, 260, 1210, 1469
AclWI GGATC 2 cut(s) 676, 1198
AcoI YGGCCR 1 cut(s) 184
AcsI RAATTY 1 cut(s) 200
AcuI CTGAAG 2 cut(s) 51, 405
AcyI GRCGYC 1 cut(s) 1489
AfiI CCNNNNNNNGG 2 cut(s) 193, 941
AgsI TTSAA 7 cut(s) 192, 257, 272, 336, 1052, 1083, 1475
AjnI CCWGG 2 cut(s) 666, 1588
AloI GAACNNNNNNTCC 4 cut(s) 1147, 1179, 1188, 1220
Alw26I GTCTC 2 cut(s) 112, 1439
AlwI GGATC 2 cut(s) 676, 1198
Ama87I CYCGRG 1 cut(s) 394
AoxI GGCC 4 cut(s) 184, 553, 896, 1091
ApoI RAATTY 1 cut(s) 200
AspLEI GCGC 1 cut(s) 1362
AspS9I GGNCC 3 cut(s) 553, 578, 897
AsuHPI GGTGA 5 cut(s) 208, 372, 1007, 1265, 1516
AvaI CYCGRG 1 cut(s) 394
AvaII GGWCC 1 cut(s) 578
BaeI ACNNNNGTAYC 2 cut(s) 1043, 1076
BauI CACGAG 1 cut(s) 1560
BccI CCATC 7 cut(s) 230, 401, 569, 713, 935, 1147, 1244
BceAI ACGGC 1 cut(s) 171
BciT130I CCWGG 2 cut(s) 668, 1590
BciVI GTATCC 1 cut(s) 286
BcoDI GTCTC 2 cut(s) 112, 1439
BfaI CTAG 2 cut(s) 603, 1152
BfmI CTRYAG 3 cut(s) 219, 325, 1515
BfoI RGCGCY 1 cut(s) 1363
BfuI GTATCC 1 cut(s) 286
Bme1390I CCNGG 2 cut(s) 668, 1590
Bme18I GGWCC 1 cut(s) 578
BmeT110I CYCGRG 1 cut(s) 394
BmgT120I GGNCC 3 cut(s) 553, 578, 897
BmiI GGNNCC 2 cut(s) 554, 899
BmrFI CCNGG 2 cut(s) 668, 1590
BmrI ACTGGG 2 cut(s) 108, 1175
BmuI ACTGGG 2 cut(s) 108, 1175
BpmI CTGGAG 1 cut(s) 1220
BsaHI GRCGYC 1 cut(s) 1489
BsaJI CCNNGG 3 cut(s) 556, 1088, 1588
BsaXI ACNNNNNCTCC 6 cut(s) 64, 94, 729, 759, 1147, 1177
Bsc4I CCNNNNNNNGG 2 cut(s) 193, 941
Bse1I ACTGG 4 cut(s) 103, 985, 1181, 1203
BseBI CCWGG 2 cut(s) 668, 1590
BseDI CCNNGG 3 cut(s) 556, 1088, 1588
BseGI GGATG 5 cut(s) 463, 829, 1139, 1255, 1409
BseLI CCNNNNNNNGG 2 cut(s) 193, 941
BseNI ACTGG 4 cut(s) 103, 985, 1181, 1203
BseRI GAGGAG 4 cut(s) 69, 573, 1122, 1450
BseYI CCCAGC 1 cut(s) 374
BshFI GGCC 4 cut(s) 186, 555, 898, 1093
BsiHKCI CYCGRG 1 cut(s) 394
BslFI GGGAC 2 cut(s) 65, 1018
BslI CCNNNNNNNGG 2 cut(s) 193, 941
BsmAI GTCTC 2 cut(s) 112, 1439
BsmFI GGGAC 2 cut(s) 65, 1018
BsmI GAATGC 1 cut(s) 761
BsnI GGCC 4 cut(s) 186, 555, 898, 1093
BsoBI CYCGRG 1 cut(s) 394
Bsp143I GATC 3 cut(s) 30, 681, 1203
Bsp19I CCATGG 1 cut(s) 1088
BspACI CCGC 4 cut(s) 176, 260, 1210, 1469
BspANI GGCC 4 cut(s) 186, 555, 898, 1093
BspHI TCATGA 1 cut(s) 1185
BspLI GGNNCC 2 cut(s) 554, 899
BspPI GGATC 2 cut(s) 676, 1198
BsrI ACTGG 4 cut(s) 103, 985, 1181, 1203
BssECI CCNNGG 3 cut(s) 556, 1088, 1588
BssMI GATC 3 cut(s) 30, 681, 1203
BssNI GRCGYC 1 cut(s) 1489
BssSI CACGAG 1 cut(s) 1560
BssT1I CCWWGG 1 cut(s) 1088
Bst2BI CACGAG 1 cut(s) 1560
Bst2UI CCWGG 2 cut(s) 668, 1590
Bst4CI ACNGT 4 cut(s) 220, 229, 464, 704
BstACI GRCGYC 1 cut(s) 1489
BstC8I GCNNGC 4 cut(s) 753, 780, 804, 1364
BstDEI CTNAG 1 cut(s) 1218
BstDSI CCRYGG 1 cut(s) 1088
BstEII GGTNACC 1 cut(s) 378
BstF5I GGATG 5 cut(s) 463, 829, 1139, 1255, 1409
BstH2I RGCGCY 1 cut(s) 1363
BstHHI GCGC 1 cut(s) 1362
BstKTI GATC 3 cut(s) 33, 684, 1206
BstMAI GTCTC 2 cut(s) 112, 1439
BstMBI GATC 3 cut(s) 30, 681, 1203
BstNI CCWGG 2 cut(s) 668, 1590
BstNSI RCATGY 2 cut(s) 404, 778
BstPI GGTNACC 1 cut(s) 378
BstSCI CCNGG 2 cut(s) 666, 1588
BstSFI CTRYAG 3 cut(s) 219, 325, 1515
BstX2I RGATCY 2 cut(s) 681, 1203
BstXI CCANNNNNNTGG 1 cut(s) 719
BstYI RGATCY 2 cut(s) 681, 1203
BsuI GTATCC 1 cut(s) 286
BsuRI GGCC 4 cut(s) 186, 555, 898, 1093
BtgI CCRYGG 1 cut(s) 1088
BtsCI GGATG 5 cut(s) 463, 829, 1139, 1255, 1409
BtsI GCAGTG 2 cut(s) 750, 1447
BtsIMutI CAGTG 5 cut(s) 146, 469, 750, 912, 1447
Cac8I GCNNGC 4 cut(s) 753, 780, 804, 1364
CciI TCATGA 1 cut(s) 1185
CfoI GCGC 1 cut(s) 1362
Cfr13I GGNCC 3 cut(s) 553, 578, 897
CseI GACGC 1 cut(s) 782
CviAII CATG 7 cut(s) 401, 569, 716, 775, 1089, 1186, 1245
DdeI CTNAG 1 cut(s) 1218
DpnI GATC 3 cut(s) 32, 683, 1205
DpnII GATC 3 cut(s) 30, 681, 1203
EaeI YGGCCR 1 cut(s) 184
Eco130I CCWWGG 1 cut(s) 1088
Eco47I GGWCC 1 cut(s) 578
Eco57I CTGAAG 2 cut(s) 51, 405
Eco88I CYCGRG 1 cut(s) 394
Eco91I GGTNACC 1 cut(s) 378
EcoO109I RGGNCCY 1 cut(s) 897
EcoO65I GGTNACC 1 cut(s) 378
EcoRII CCWGG 2 cut(s) 666, 1588
EcoT14I CCWWGG 1 cut(s) 1088
EcoT22I ATGCAT 1 cut(s) 1347
ErhI CCWWGG 1 cut(s) 1088
FaeI CATG 7 cut(s) 404, 572, 719, 778, 1092, 1189, 1248
FaqI GGGAC 2 cut(s) 65, 1018
FatI CATG 7 cut(s) 400, 568, 715, 774, 1088, 1185, 1244
FauI CCCGC 1 cut(s) 1217
FblI GTMKAC 1 cut(s) 1518
FokI GGATG 5 cut(s) 470, 836, 1126, 1262, 1396
FspBI CTAG 2 cut(s) 603, 1152
GlaI GCGC 1 cut(s) 1361
GsaI CCCAGC 1 cut(s) 378
GsuI CTGGAG 1 cut(s) 1220
HaeII RGCGCY 1 cut(s) 1363
HaeIII GGCC 4 cut(s) 186, 555, 898, 1093
HgaI GACGC 1 cut(s) 782
HhaI GCGC 1 cut(s) 1362
Hin1I GRCGYC 1 cut(s) 1489
Hin1II CATG 7 cut(s) 404, 572, 719, 778, 1092, 1189, 1248
Hin6I GCGC 1 cut(s) 1360
HinP1I GCGC 1 cut(s) 1360
HindIII AAGCTT 1 cut(s) 245
HinfI GANTC 4 cut(s) 40, 305, 1048, 1114
HphI GGTGA 5 cut(s) 208, 372, 1007, 1265, 1516
Hpy166II GTNNAC 3 cut(s) 956, 1487, 1519
Hpy188I TCNGA 5 cut(s) 30, 310, 1047, 1281, 1528
Hpy188III TCNNGA 6 cut(s) 505, 677, 1118, 1186, 1475, 1493
Hpy8I GTNNAC 3 cut(s) 956, 1487, 1519
Hpy99I CGWCG 2 cut(s) 798, 1494
HpyAV CCTTC 1 cut(s) 380
HpyCH4III ACNGT 4 cut(s) 220, 229, 464, 704
HpyCH4IV ACGT 1 cut(s) 1489
HpyF3I CTNAG 1 cut(s) 1218
HpySE526I ACGT 1 cut(s) 1489
Hsp92I GRCGYC 1 cut(s) 1489
Hsp92II CATG 7 cut(s) 404, 572, 719, 778, 1092, 1189, 1248
HspAI GCGC 1 cut(s) 1360
Kzo9I GATC 3 cut(s) 30, 681, 1203
LmnI GCTCC 1 cut(s) 1437
MaeI CTAG 2 cut(s) 603, 1152
MaeII ACGT 1 cut(s) 1489
MaeIII GTNAC 6 cut(s) 94, 144, 317, 378, 526, 770
MalI GATC 3 cut(s) 32, 683, 1205
MboI GATC 3 cut(s) 30, 681, 1203
MboII GAAGA 4 cut(s) 520, 599, 976, 1038
MflI RGATCY 2 cut(s) 681, 1203
MluCI AATT 6 cut(s) 90, 200, 672, 906, 1240, 1567
MmeI TCCRAC 2 cut(s) 709, 1437
Mph1103I ATGCAT 1 cut(s) 1347
MseI TTAA 2 cut(s) 132, 905
MslI CAYNNNNRTG 4 cut(s) 405, 573, 696, 717
MspA1I CMGCKG 2 cut(s) 176, 758
MspR9I CCNGG 2 cut(s) 668, 1590
Mva1269I GAATGC 1 cut(s) 761
MvaI CCWGG 2 cut(s) 668, 1590
NcoI CCATGG 1 cut(s) 1088
NdeII GATC 3 cut(s) 30, 681, 1203
NlaIII CATG 7 cut(s) 404, 572, 719, 778, 1092, 1189, 1248
NlaIV GGNNCC 2 cut(s) 554, 899
NmeAIII GCCGAG 1 cut(s) 581
NmuCI GTSAC 2 cut(s) 144, 378
NsiI ATGCAT 1 cut(s) 1347
NspI RCATGY 2 cut(s) 404, 778
PagI TCATGA 1 cut(s) 1185
PctI GAATGC 1 cut(s) 761
PfeI GAWTC 4 cut(s) 40, 305, 1048, 1114
PflMI CCANNNNNTGG 1 cut(s) 941
Psp6I CCWGG 2 cut(s) 666, 1588
PspEI GGTNACC 1 cut(s) 378
PspFI CCCAGC 1 cut(s) 374
PspGI CCWGG 2 cut(s) 666, 1588
PspN4I GGNNCC 2 cut(s) 554, 899
PspPI GGNCC 3 cut(s) 553, 578, 897
PsuI RGATCY 2 cut(s) 681, 1203
PvuII CAGCTG 1 cut(s) 758
RseI CAYNNNNRTG 4 cut(s) 405, 573, 696, 717
SaqAI TTAA 2 cut(s) 132, 905
Sau3AI GATC 3 cut(s) 30, 681, 1203
Sau96I GGNCC 3 cut(s) 553, 578, 897
ScrFI CCNGG 2 cut(s) 668, 1590
SfcI CTRYAG 3 cut(s) 219, 325, 1515
SinI GGWCC 1 cut(s) 578
SmiMI CAYNNNNRTG 4 cut(s) 405, 573, 696, 717
Sse9I AATT 6 cut(s) 90, 200, 672, 906, 1240, 1567
SsiI CCGC 4 cut(s) 176, 260, 1210, 1469
SspI AATATT 2 cut(s) 472, 810
SspMI CTAG 2 cut(s) 603, 1152
StyD4I CCNGG 2 cut(s) 666, 1588
StyI CCWWGG 1 cut(s) 1088
TaaI ACNGT 4 cut(s) 220, 229, 464, 704
TaiI ACGT 1 cut(s) 1492
TaqI TCGA 4 cut(s) 234, 796, 1228, 1555
TasI AATT 6 cut(s) 90, 200, 672, 906, 1240, 1567
TfiI GAWTC 4 cut(s) 40, 305, 1048, 1114
Tru1I TTAA 2 cut(s) 132, 905
Tru9I TTAA 2 cut(s) 132, 905
TscAI CASTG 5 cut(s) 153, 469, 750, 919, 1447
TseFI GTSAC 2 cut(s) 144, 378
Tsp45I GTSAC 2 cut(s) 144, 378
TspDTI ATGAA 6 cut(s) 48, 446, 506, 804, 936, 1233
TspRI CASTG 5 cut(s) 153, 469, 750, 919, 1447
Van91I CCANNNNNTGG 1 cut(s) 941
VpaK11BI GGWCC 1 cut(s) 578
XapI RAATTY 1 cut(s) 200
XceI RCATGY 2 cut(s) 404, 778
XmiI GTMKAC 1 cut(s) 1518
XspI CTAG 2 cut(s) 603, 1152
ZraI GACGTC 1 cut(s) 1490
Zsp2I ATGCAT 1 cut(s) 1347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.