Prupe.1G468300_v2.0.a1

oxidoreductase activity

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
38984871 .. 38987282
2412 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G468300.1

Sequence Viewer

Length: 441 bp
ATGAAAGGGCTCCAAGCTCACACGGACAAACAATTCAGCACAATACTTTGTGATGATCAAGTTTCTGGGCTTGAATTTGAAACCAAGGATGGACAATGGAACAAGTTATCTCTATCTCCTAGCTCCTTCATCTTCTTTGTTGGAGATCCTCTTATGGCATGGAGTAATGGCAGAATGCATCCCGTGAAGCATCGTGTGATGATGTCTGGAGAAAAAGATCGATACTCTCTAGGAGCATTTGCAGTTCCAGTTGAGGGTACCATCATCAAGACACCAAAGGAGTTAGTTGATGAAGAATATCCTCAAATTCTCAAAGAATTTGACCACATGGATTTTACCAAGTTGTCCTATTCAGAGGAAGGAAGGGCCATAGACTCAGCAAGGCAAGTTTTTGTGTTTGCTGGAATTTGCACTTTGAGAACAACTTCATGGATCTTTTGA

Protein Analysis

147

Amino Acids

16.62

Weight (kDa)

5.53

Isoelectric Point (pI)

39.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000436)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29950 FvH4_2g29960 FvH4_2g29960 FvH4_2g29960 FvH4_2g29980 FvH4_2g29990 FvH4_3g12330 FvH4_3g12340 FvH4_3g23800 FvH4_3g23801 FvH4_3g23830
prunus_persica Prupe.1G468200_v2.0.a1 Prupe.1G468300_v2.0.a1 Prupe.1G470900_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0342041 RchiOBHm_Chr1g0342061 RchiOBHm_Chr4g0409261 RchiOBHm_Chr4g0418441 RchiOBHm_Chr5g0041931 RchiOBHm_Chr5g0041981 RchiOBHm_Chr5g0043241 RchiOBHm_Chr5g0043271 RchiOBHm_Chr5g0079921 RchiOBHm_Chr5g0079941 RchiOBHm_Chr5g0079991 RchiOBHm_Chr6g0312931
rosa_laevigata RLG00000007865 RLG00000008582 RLG00000010284 RLG00000029146 RLG00000029147 RLG00000034107 RLG00000034173 RLG00000034175 RLG00000036840 RLG00000036842 RLG00000036843
rosa_multiflora Rmu_co8315005.1_g000001 Rmu_sc0001148.1_g000001 Rmu_sc0001266.1_g000006 Rmu_sc0002161.1_g000031 Rmu_sc0002377.1_g000011 Rmu_sc0003514.1_g000009 Rmu_sc0003514.1_g000013 Rmu_sc0003514.1_g000017 Rmu_sc0006723.1_g000001 Rmu_sc0008049.1_g000042 Rmu_sc0009443.1_g000004
rosa_roxburghii Rroxscaffold_1G00003160 Rroxscaffold_1G00003170 Rroxscaffold_1G00037550 Rroxscaffold_1G00038600 Rroxscaffold_4G00312790 Rroxscaffold_5G00361670
rosa_rugosa Rorug01G0153300.1 Rorug01G0153400.1 Rorug04G0091600 Rorug04G0091700 Rorug04G0091800 Rorug04G0153100 Rorug05G0197600 Rorug05G0204900.1 Rorug05G0467400 Rorug05G0467500 Rorug05G0467600.1 Rorug06G0400500 Rorug06G0400600
rosa_samantha Rh1BG134400 Rh1BG134500 Rh1DG168500 Rh1DG168600 Rh4BG152600 Rh4BG215900 Rh4DG148000 Rh4DG213000 Rh5CG319800 Rh5CG326800 Rh5CG566100 Rh5CG566400 Rh5CG566600 Rh5DG296900 Rh5DG552900 Rh5DG553200 Rh6CG533800
rosa_wichuraiana Rw0G001380 Rw0G010030 Rw0G015700 Rw1G013970 Rw4G012650 Rw4G018220 Rw5G026860 Rw5G048330 Rw5G048350 Rw6G044990 Rw6G045000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 257
AccB1I GGYRCC 1 cut(s) 257
AclWI GGATC 2 cut(s) 140, 440
AcsI RAATTY 4 cut(s) 74, 306, 317, 405
AfaI GTAC 1 cut(s) 259
AfiI CCNNNNNNNGG 1 cut(s) 254
AgsI TTSAA 2 cut(s) 74, 80
AluBI AGCT 2 cut(s) 17, 123
AluI AGCT 2 cut(s) 17, 123
AlwI GGATC 2 cut(s) 140, 440
AoxI GGCC 1 cut(s) 366
ApoI RAATTY 4 cut(s) 74, 306, 317, 405
Asp700I GAANNNNTTC 1 cut(s) 424
Asp718I GGTACC 1 cut(s) 257
AspS9I GGNCC 1 cut(s) 366
BanI GGYRCC 1 cut(s) 257
BanII GRGCYC 1 cut(s) 12
BccI CCATC 2 cut(s) 83, 269
BclI TGATCA 1 cut(s) 55
BfaI CTAG 2 cut(s) 120, 230
BmgT120I GGNCC 1 cut(s) 366
BmiI GGNNCC 2 cut(s) 11, 259
BmsI GCATC 2 cut(s) 187, 199
BpmI CTGGAG 1 cut(s) 228
Bsa29I ATCGAT 1 cut(s) 220
BsaJI CCNNGG 1 cut(s) 84
Bsc4I CCNNNNNNNGG 1 cut(s) 254
Bse1I ACTGG 1 cut(s) 248
BseCI ATCGAT 1 cut(s) 220
BseDI CCNNGG 1 cut(s) 84
BseGI GGATG 2 cut(s) 94, 178
BseLI CCNNNNNNNGG 1 cut(s) 254
BseMII CTCAG 1 cut(s) 390
BseNI ACTGG 1 cut(s) 248
BshFI GGCC 1 cut(s) 368
BshNI GGYRCC 1 cut(s) 257
BshVI ATCGAT 1 cut(s) 220
BslI CCNNNNNNNGG 1 cut(s) 254
BsmI GAATGC 1 cut(s) 180
BsnI GGCC 1 cut(s) 368
Bsp1286I GDGCHC 1 cut(s) 12
Bsp143I GATC 4 cut(s) 55, 145, 217, 432
BspANI GGCC 1 cut(s) 368
BspCNI CTCAG 1 cut(s) 389
BspDI ATCGAT 1 cut(s) 220
BspLI GGNNCC 2 cut(s) 11, 259
BspPI GGATC 2 cut(s) 140, 440
BspT107I GGYRCC 1 cut(s) 257
BsrI ACTGG 1 cut(s) 248
BssECI CCNNGG 1 cut(s) 84
BssMI GATC 4 cut(s) 55, 145, 217, 432
BssT1I CCWWGG 1 cut(s) 84
BstDEI CTNAG 1 cut(s) 376
BstF5I GGATG 2 cut(s) 94, 178
BstKTI GATC 4 cut(s) 58, 148, 220, 435
BstMBI GATC 4 cut(s) 55, 145, 217, 432
BstX2I RGATCY 2 cut(s) 145, 432
BstYI RGATCY 2 cut(s) 145, 432
Bsu15I ATCGAT 1 cut(s) 220
BsuRI GGCC 1 cut(s) 368
BsuTUI ATCGAT 1 cut(s) 220
BtsCI GGATG 2 cut(s) 94, 178
Cfr13I GGNCC 1 cut(s) 366
ClaI ATCGAT 1 cut(s) 220
Csp6I GTAC 1 cut(s) 258
CviAII CATG 3 cut(s) 159, 328, 429
CviJI RGCY 5 cut(s) 10, 17, 70, 123, 368
CviKI_1 RGCY 5 cut(s) 10, 17, 70, 123, 368
CviQI GTAC 1 cut(s) 258
DdeI CTNAG 1 cut(s) 376
DpnI GATC 4 cut(s) 57, 147, 219, 434
DpnII GATC 4 cut(s) 55, 145, 217, 432
Eco130I CCWWGG 1 cut(s) 84
Eco24I GRGCYC 1 cut(s) 12
EcoT14I CCWWGG 1 cut(s) 84
EcoT22I ATGCAT 1 cut(s) 180
EcoT38I GRGCYC 1 cut(s) 12
ErhI CCWWGG 1 cut(s) 84
FaeI CATG 3 cut(s) 162, 331, 432
FaiI YATR 5 cut(s) 155, 160, 329, 371, 430
FatI CATG 3 cut(s) 158, 327, 428
FbaI TGATCA 1 cut(s) 55
FokI GGATG 2 cut(s) 101, 165
FriOI GRGCYC 1 cut(s) 12
FspBI CTAG 2 cut(s) 120, 230
GsuI CTGGAG 1 cut(s) 228
HaeIII GGCC 1 cut(s) 368
Hin1II CATG 3 cut(s) 162, 331, 432
HinfI GANTC 1 cut(s) 374
Hpy188I TCNGA 1 cut(s) 355
Hpy188III TCNNGA 2 cut(s) 207, 268
HpyAV CCTTC 3 cut(s) 136, 353, 357
HpyCH4V TGCA 3 cut(s) 178, 242, 411
HpyF3I CTNAG 1 cut(s) 376
Hsp92II CATG 3 cut(s) 162, 331, 432
KpnI GGTACC 1 cut(s) 261
Ksp22I TGATCA 1 cut(s) 55
Kzo9I GATC 4 cut(s) 55, 145, 217, 432
LmnI GCTCC 3 cut(s) 15, 128, 233
LpnPI CCDG 4 cut(s) 51, 192, 261, 387
LweI GCATC 2 cut(s) 187, 199
MaeI CTAG 2 cut(s) 120, 230
MalI GATC 4 cut(s) 57, 147, 219, 434
MboI GATC 4 cut(s) 55, 145, 217, 432
MboII GAAGA 2 cut(s) 124, 305
MflI RGATCY 2 cut(s) 145, 432
MhlI GDGCHC 1 cut(s) 12
MluCI AATT 5 cut(s) 32, 74, 306, 317, 405
MlyI GAGTC 1 cut(s) 368
MmeI TCCRAC 1 cut(s) 121
MnlI CCTC 4 cut(s) 159, 247, 312, 349
Mph1103I ATGCAT 1 cut(s) 180
MroXI GAANNNNTTC 1 cut(s) 424
Mva1269I GAATGC 1 cut(s) 180
NdeII GATC 4 cut(s) 55, 145, 217, 432
NlaIII CATG 3 cut(s) 162, 331, 432
NlaIV GGNNCC 2 cut(s) 11, 259
NsiI ATGCAT 1 cut(s) 180
PctI GAATGC 1 cut(s) 180
PdmI GAANNNNTTC 1 cut(s) 424
PleI GAGTC 1 cut(s) 368
PpsI GAGTC 1 cut(s) 368
PspN4I GGNNCC 2 cut(s) 11, 259
PspPI GGNCC 1 cut(s) 366
PsuI RGATCY 2 cut(s) 145, 432
RsaI GTAC 1 cut(s) 259
RsaNI GTAC 1 cut(s) 258
Sau3AI GATC 4 cut(s) 55, 145, 217, 432
Sau96I GGNCC 1 cut(s) 366
SchI GAGTC 1 cut(s) 368
SduI GDGCHC 1 cut(s) 12
SetI ASST 2 cut(s) 19, 125
SfaNI GCATC 2 cut(s) 187, 199
Sse9I AATT 5 cut(s) 32, 74, 306, 317, 405
SspMI CTAG 2 cut(s) 120, 230
StyI CCWWGG 1 cut(s) 84
TaqI TCGA 1 cut(s) 220
TasI AATT 5 cut(s) 32, 74, 306, 317, 405
TspDTI ATGAA 4 cut(s) 17, 118, 306, 417
TspGWI ACGGA 1 cut(s) 38
XapI RAATTY 4 cut(s) 74, 306, 317, 405
XmnI GAANNNNTTC 1 cut(s) 424
XspI CTAG 2 cut(s) 120, 230
Zsp2I ATGCAT 1 cut(s) 180
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.