Gibberellin 3-beta-dioxygenase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| 2OG-FeII_Oxy | PF03171 | 90 - 145 | 2.1e-06 | 2OG-Fe(II) oxygenase superfamily |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 2 cut(s) | 572, 586 |
| AccB1I | GGYRCC | 2 cut(s) | 572, 586 |
| AclWI | GGATC | 2 cut(s) | 389, 422 |
| AcoI | YGGCCR | 1 cut(s) | 107 |
| AcsI | RAATTY | 3 cut(s) | 226, 621, 647 |
| AfaI | GTAC | 3 cut(s) | 293, 574, 588 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 284, 569, 678 |
| AflII | CTTAAG | 1 cut(s) | 170 |
| AgsI | TTSAA | 4 cut(s) | 59, 185, 226, 231 |
| AluBI | AGCT | 4 cut(s) | 48, 160, 169, 273 |
| AluI | AGCT | 4 cut(s) | 48, 160, 169, 273 |
| Alw26I | GTCTC | 1 cut(s) | 694 |
| AlwI | GGATC | 2 cut(s) | 389, 422 |
| AoxI | GGCC | 1 cut(s) | 107 |
| ApeKI | GCWGC | 1 cut(s) | 157 |
| ApoI | RAATTY | 3 cut(s) | 226, 621, 647 |
| Asp718I | GGTACC | 2 cut(s) | 572, 586 |
| AsuHPI | GGTGA | 1 cut(s) | 267 |
| BalI | TGGCCA | 1 cut(s) | 109 |
| BanI | GGYRCC | 2 cut(s) | 572, 586 |
| BanII | GRGCYC | 1 cut(s) | 306 |
| BbvI | GCAGC | 1 cut(s) | 169 |
| BccI | CCATC | 4 cut(s) | 107, 289, 365, 584 |
| BclI | TGATCA | 1 cut(s) | 349 |
| BcoDI | GTCTC | 1 cut(s) | 694 |
| BfmI | CTRYAG | 1 cut(s) | 138 |
| BfrI | CTTAAG | 1 cut(s) | 170 |
| BisI | GCNGC | 1 cut(s) | 158 |
| BlsI | GCNGC | 1 cut(s) | 159 |
| BmiI | GGNNCC | 3 cut(s) | 305, 574, 588 |
| BmsI | GCATC | 2 cut(s) | 52, 503 |
| BpmI | CTGGAG | 1 cut(s) | 386 |
| BpuEI | CTTGAG | 1 cut(s) | 611 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 284, 569, 678 |
| Bse1I | ACTGG | 4 cut(s) | 124, 369, 498, 563 |
| Bse3DI | GCAATG | 2 cut(s) | 488, 552 |
| BseGI | GGATG | 4 cut(s) | 169, 376, 494, 613 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 284, 569, 678 |
| BseMI | GCAATG | 2 cut(s) | 488, 552 |
| BseMII | CTCAG | 3 cut(s) | 74, 681, 705 |
| BseNI | ACTGG | 4 cut(s) | 124, 369, 498, 563 |
| BseXI | GCAGC | 1 cut(s) | 169 |
| BshFI | GGCC | 1 cut(s) | 109 |
| BshNI | GGYRCC | 2 cut(s) | 572, 586 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 284, 569, 678 |
| BsmAI | GTCTC | 1 cut(s) | 694 |
| BsnI | GGCC | 1 cut(s) | 109 |
| Bsp1286I | GDGCHC | 1 cut(s) | 306 |
| Bsp143I | GATC | 3 cut(s) | 349, 381, 427 |
| BspANI | GGCC | 1 cut(s) | 109 |
| BspCNI | CTCAG | 3 cut(s) | 75, 680, 704 |
| BspHI | TCATGA | 1 cut(s) | 118 |
| BspLI | GGNNCC | 3 cut(s) | 305, 574, 588 |
| BspPI | GGATC | 2 cut(s) | 389, 422 |
| BspT107I | GGYRCC | 2 cut(s) | 572, 586 |
| BspTI | CTTAAG | 1 cut(s) | 170 |
| BsrDI | GCAATG | 2 cut(s) | 488, 552 |
| BsrI | ACTGG | 4 cut(s) | 124, 369, 498, 563 |
| BssMI | GATC | 3 cut(s) | 349, 381, 427 |
| Bst4CI | ACNGT | 1 cut(s) | 139 |
| BstAFI | CTTAAG | 1 cut(s) | 170 |
| BstC8I | GCNNGC | 3 cut(s) | 24, 468, 472 |
| BstDEI | CTNAG | 3 cut(s) | 83, 667, 691 |
| BstF5I | GGATG | 4 cut(s) | 169, 376, 494, 613 |
| BstKTI | GATC | 3 cut(s) | 352, 384, 430 |
| BstMAI | GTCTC | 1 cut(s) | 694 |
| BstMBI | GATC | 3 cut(s) | 349, 381, 427 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 166 |
| BstNSI | RCATGY | 2 cut(s) | 26, 298 |
| BstSFI | CTRYAG | 1 cut(s) | 138 |
| BstV1I | GCAGC | 1 cut(s) | 169 |
| BstX2I | RGATCY | 1 cut(s) | 427 |
| BstYI | RGATCY | 1 cut(s) | 427 |
| BsuRI | GGCC | 1 cut(s) | 109 |
| BtsCI | GGATG | 4 cut(s) | 169, 376, 494, 613 |
| BtsI | GCAGTG | 1 cut(s) | 248 |
| BtsIMutI | CAGTG | 3 cut(s) | 248, 315, 505 |
| Cac8I | GCNNGC | 3 cut(s) | 24, 468, 472 |
| CciI | TCATGA | 1 cut(s) | 118 |
| Csp6I | GTAC | 3 cut(s) | 292, 573, 587 |
| CviAII | CATG | 7 cut(s) | 23, 119, 235, 295, 308, 441, 475 |
| CviJI | RGCY | 9 cut(s) | 48, 109, 160, 169, 273, 304, 466, 671, 682 |
| CviKI_1 | RGCY | 9 cut(s) | 48, 109, 160, 169, 273, 304, 466, 671, 682 |
| CviQI | GTAC | 3 cut(s) | 292, 573, 587 |
| DdeI | CTNAG | 3 cut(s) | 83, 667, 691 |
| DpnI | GATC | 3 cut(s) | 351, 383, 429 |
| DpnII | GATC | 3 cut(s) | 349, 381, 427 |
| EaeI | YGGCCR | 1 cut(s) | 107 |
| Eco24I | GRGCYC | 1 cut(s) | 306 |
| EcoRI | GAATTC | 1 cut(s) | 226 |
| EcoT22I | ATGCAT | 1 cut(s) | 24 |
| EcoT38I | GRGCYC | 1 cut(s) | 306 |
| FaeI | CATG | 7 cut(s) | 26, 122, 238, 298, 311, 444, 478 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 527, 559 |
| FatI | CATG | 7 cut(s) | 22, 118, 234, 294, 307, 440, 474 |
| FauNDI | CATATG | 1 cut(s) | 147 |
| FbaI | TGATCA | 1 cut(s) | 349 |
| Fnu4HI | GCNGC | 1 cut(s) | 158 |
| FokI | GGATG | 4 cut(s) | 176, 383, 481, 600 |
| FriOI | GRGCYC | 1 cut(s) | 306 |
| Fsp4HI | GCNGC | 1 cut(s) | 158 |
| GluI | GCNGC | 1 cut(s) | 158 |
| GsuI | CTGGAG | 1 cut(s) | 386 |
| HaeIII | GGCC | 1 cut(s) | 109 |
| Hin1II | CATG | 7 cut(s) | 26, 122, 238, 298, 311, 444, 478 |
| HinfI | GANTC | 3 cut(s) | 77, 193, 503 |
| HphI | GGTGA | 1 cut(s) | 267 |
| Hpy188I | TCNGA | 3 cut(s) | 84, 135, 655 |
| Hpy188III | TCNNGA | 3 cut(s) | 119, 360, 717 |
| HpyAV | CCTTC | 1 cut(s) | 672 |
| HpyCH4III | ACNGT | 1 cut(s) | 139 |
| HpyCH4V | TGCA | 5 cut(s) | 22, 26, 298, 470, 557 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 166 |
| HpyF3I | CTNAG | 3 cut(s) | 83, 667, 691 |
| Hsp92II | CATG | 7 cut(s) | 26, 122, 238, 298, 311, 444, 478 |
| KpnI | GGTACC | 2 cut(s) | 576, 590 |
| Ksp22I | TGATCA | 1 cut(s) | 349 |
| Kzo9I | GATC | 3 cut(s) | 349, 381, 427 |
| LmnI | GCTCC | 2 cut(s) | 309, 478 |
| Lsp1109I | GCAGC | 1 cut(s) | 169 |
| LweI | GCATC | 2 cut(s) | 52, 503 |
| MaeIII | GTNAC | 1 cut(s) | 4 |
| MalI | GATC | 3 cut(s) | 351, 383, 429 |
| MboI | GATC | 3 cut(s) | 349, 381, 427 |
| MboII | GAAGA | 2 cut(s) | 71, 620 |
| MflI | RGATCY | 1 cut(s) | 427 |
| MhlI | GDGCHC | 1 cut(s) | 306 |
| MlsI | TGGCCA | 1 cut(s) | 109 |
| MluCI | AATT | 6 cut(s) | 221, 226, 447, 621, 647, 720 |
| MluNI | TGGCCA | 1 cut(s) | 109 |
| MlyI | GAGTC | 1 cut(s) | 71 |
| MmeI | TCCRAC | 2 cut(s) | 93, 403 |
| MnlI | CCTC | 6 cut(s) | 76, 264, 288, 361, 441, 562 |
| Mox20I | TGGCCA | 1 cut(s) | 109 |
| Mph1103I | ATGCAT | 1 cut(s) | 24 |
| MscI | TGGCCA | 1 cut(s) | 109 |
| MseI | TTAA | 3 cut(s) | 171, 198, 329 |
| Msp20I | TGGCCA | 1 cut(s) | 109 |
| MspA1I | CMGCKG | 1 cut(s) | 160 |
| MspCI | CTTAAG | 1 cut(s) | 170 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 166 |
| NdeI | CATATG | 1 cut(s) | 147 |
| NdeII | GATC | 3 cut(s) | 349, 381, 427 |
| NlaIII | CATG | 7 cut(s) | 26, 122, 238, 298, 311, 444, 478 |
| NlaIV | GGNNCC | 3 cut(s) | 305, 574, 588 |
| NsiI | ATGCAT | 1 cut(s) | 24 |
| NspI | RCATGY | 2 cut(s) | 26, 298 |
| PaeI | GCATGC | 1 cut(s) | 26 |
| PagI | TCATGA | 1 cut(s) | 118 |
| PfeI | GAWTC | 2 cut(s) | 193, 503 |
| PkrI | GCNGC | 1 cut(s) | 159 |
| PleI | GAGTC | 1 cut(s) | 71 |
| PpsI | GAGTC | 1 cut(s) | 71 |
| PspN4I | GGNNCC | 3 cut(s) | 305, 574, 588 |
| PsuI | RGATCY | 1 cut(s) | 427 |
| PvuII | CAGCTG | 1 cut(s) | 160 |
| RsaI | GTAC | 3 cut(s) | 293, 574, 588 |
| RsaNI | GTAC | 3 cut(s) | 292, 573, 587 |
| SaqAI | TTAA | 3 cut(s) | 171, 198, 329 |
| SatI | GCNGC | 1 cut(s) | 158 |
| Sau3AI | GATC | 3 cut(s) | 349, 381, 427 |
| SchI | GAGTC | 1 cut(s) | 71 |
| SduI | GDGCHC | 1 cut(s) | 306 |
| SetI | ASST | 6 cut(s) | 50, 162, 171, 275, 280, 588 |
| SfaNI | GCATC | 2 cut(s) | 52, 503 |
| SfcI | CTRYAG | 1 cut(s) | 138 |
| SmlI | CTYRAG | 2 cut(s) | 170, 626 |
| SmoI | CTYRAG | 2 cut(s) | 170, 626 |
| SphI | GCATGC | 1 cut(s) | 26 |
| Sse9I | AATT | 6 cut(s) | 221, 226, 447, 621, 647, 720 |
| TaaI | ACNGT | 1 cut(s) | 139 |
| TaqI | TCGA | 1 cut(s) | 256 |
| TasI | AATT | 6 cut(s) | 221, 226, 447, 621, 647, 720 |
| TatI | WGTACW | 1 cut(s) | 291 |
| TfiI | GAWTC | 2 cut(s) | 193, 503 |
| Tru1I | TTAA | 3 cut(s) | 171, 198, 329 |
| Tru9I | TTAA | 3 cut(s) | 171, 198, 329 |
| TscAI | CASTG | 3 cut(s) | 255, 322, 505 |
| TseI | GCWGC | 1 cut(s) | 157 |
| TspDTI | ATGAA | 3 cut(s) | 134, 278, 621 |
| TspRI | CASTG | 3 cut(s) | 255, 322, 505 |
| Vha464I | CTTAAG | 1 cut(s) | 170 |
| XapI | RAATTY | 3 cut(s) | 226, 621, 647 |
| XceI | RCATGY | 2 cut(s) | 26, 298 |
| Zsp2I | ATGCAT | 1 cut(s) | 24 |