Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0000436

Physical Location & Seq

Genomic Coordinates Forward (+)

14135939 .. 14137892

Gene Structure 1954 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0091700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1632 bp

ATGGACGCCGAAACGGCATCGGAATCCGGCCTAACCCTGATAAAGCAGCTCGCATCTTGCAACAATGGCAGCCGCGGCCGGGCCCTTAGGGTTCTCCTCAAGACCTGGCTCCCCACCCAGCTCAACCTCTCCGACGACCACATGAAGAAGCTCTGGAAAGGCCTCTTCTACTGCATGTGGCACGCCGACAAGGCCCCGGCCCAGGCCCAACTGATCGACCGCCTCTCCTCCCTCGTCCCCAGCCTCCACCTCCCTCTGGCCATCGACTACTTCTCGGCGTTCCTCCTCACCATGCGCCGCGAATGGTCCGGCATCGACGCCCTGAGGTTAGACAAGTTCTACCTTTTGATTCGTAGATTCATGGCTAGCTTCTTTGCTTTGATGAGGAATAATTCTTGGGATTTGGAGCTTGTGAAAAAATTGATGGGGGTTTTAATGGAGGGGAGTTTTTTCGCGGAGGATAAGTTTCCGGCGAAAGGGGTTAATTACCATATTGCCTCTGTGTTTCTTGAGGAATTGAGGCCGTTTATGCCGGTGAGGAAGGAAGTGGTTGAGGTGGTTTTAGTGGGGTTTGTTAGGGTTATGGCGAAAGCGAATGACAAGGTGTTGGTGGGGAAGATTAAGGGGAGTATGTTTGATGTGTTGCTTGGGATGGGGAGGAGGCTGTTGGAGGTTAGGAAGTTGGGGGAGGATGTGGATTCGGGGGATGATGTGGTGGTGTTTGGGTCGGTTGCGCTGTGCTTGGGGTTTTCGAGCAGGTTTCATGAAATGGGGGAGGCGGAGGAGTGCTGTCAGGGGAATAGGAAGGTGTTGTTTGGGTTGGATGAGGAGTTTTTGAAGTTGGAGAAGGAGTTGGCGGCTTCTGGGATTGAGGTTTTGATTCCTGATGCTGTGAGGAATGATGATGATGAGGAAGTGCCGAGTTTGATTCCTATTGTGGGTGAGGGGATGGAGGTTGCCAATGGGTCTGCTGGGAAGCCTTTGAAGAAGTGCAAGAAGCGAGAGAAGGACCCTGGTGGTGCTGATGTTAAGGCAGAGAAGAAGAAGAAGAAAAAGAAGAAGGACAAGAAGCAGAATGGGATTTTGGATTCTGACCCTGAGAAGAGCCATACAGATAGGGAGAATGAGAATGTGGATGCAAATGGTGAGAACCCAGATAATGAACAGGTTACTGATGGTGATGAGATAAAACTCGATGATTATGCGATCTCGAACCTCCAGATGCAGTTTGAGAAGATTGCTGCTGAAGCAGGCTTGGATCATGATCTTCCAAGTGCCTGTGAATTGCCGGCAGCTACAGCTAATGGTACTGTCTCTAAGAAGAGAAAGAGAGTGAAGAAAGCTGATGAAGTTGTGGAGGATGGCACCAAGGCAAAGAGTGGGGAGAAGAGTGCAAAGAAGGTAAAGTTTTCCATGAAAAACAACTTGGTGTGGAAGCCGCAAAGCCCTTTACCCCCTCAAAATCTAAGATTGCCCCCGTCTGCTACACCTAGAGGAAGTGCACTCAAGCAAGGAGTACCTCCAGGTCCCGTCAGGGAAATGCCTCCCCCAACCAAAAAAGTGAAAAGAGTTGTGAAGAAGACTCGGAAAGTTGTCAAACGCGTAAAGAAGTTGAAATCTCGTTCTCCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009314 GO:0009416 GO:0009628 GO:0009653 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009791 GO:0009826 GO:0009908 GO:0009987 GO:0010033 GO:0010476 GO:0010817 GO:0016043 GO:0016049 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016491 GO:0016705 GO:0016706 GO:0019752 GO:0022414 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0032989 GO:0033993 GO:0040007 GO:0042221 GO:0042445 GO:0042446 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0045544 GO:0046394 GO:0048367 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051213 GO:0051716 GO:0055114 GO:0060560 GO:0061458 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:0071840 GO:0090567 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

2OG-FeII_Oxy DIOX_N

Protein Analysis

543

Amino Acids

60.43

Weight (kDa)

9.29

Isoelectric Point (pI)

38.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nop52	PF05997	11 - 227	2.4e-62	Nucleolar protein,Nop52

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000436)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g29950 FvH4_2g29960 FvH4_2g29960 FvH4_2g29960 FvH4_2g29980 FvH4_2g29990 FvH4_3g12330 FvH4_3g12340 FvH4_3g23800 FvH4_3g23801 FvH4_3g23830
prunus_persica	Prupe.1G468200_v2.0.a1 Prupe.1G468300_v2.0.a1 Prupe.1G470900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0342041 RchiOBHm_Chr1g0342061 RchiOBHm_Chr4g0409261 RchiOBHm_Chr4g0418441 RchiOBHm_Chr5g0041931 RchiOBHm_Chr5g0041981 RchiOBHm_Chr5g0043241 RchiOBHm_Chr5g0043271 RchiOBHm_Chr5g0079921 RchiOBHm_Chr5g0079941 RchiOBHm_Chr5g0079991 RchiOBHm_Chr6g0312931
rosa_laevigata	RLG00000007865 RLG00000008582 RLG00000010284 RLG00000029146 RLG00000029147 RLG00000034107 RLG00000034173 RLG00000034175 RLG00000036840 RLG00000036842 RLG00000036843
rosa_multiflora	Rmu_co8315005.1_g000001 Rmu_sc0001148.1_g000001 Rmu_sc0001266.1_g000006 Rmu_sc0002161.1_g000031 Rmu_sc0002377.1_g000011 Rmu_sc0003514.1_g000009 Rmu_sc0003514.1_g000013 Rmu_sc0003514.1_g000017 Rmu_sc0006723.1_g000001 Rmu_sc0008049.1_g000042 Rmu_sc0009443.1_g000004
rosa_roxburghii	Rroxscaffold_1G00003160 Rroxscaffold_1G00003170 Rroxscaffold_1G00037550 Rroxscaffold_1G00038600 Rroxscaffold_4G00312790 Rroxscaffold_5G00361670
rosa_rugosa	Rorug01G0153300.1 Rorug01G0153400.1 Rorug04G0091600 Rorug04G0091700 Rorug04G0091800 Rorug04G0153100 Rorug05G0197600 Rorug05G0204900.1 Rorug05G0467400 Rorug05G0467500 Rorug05G0467600.1 Rorug06G0400500 Rorug06G0400600
rosa_samantha	Rh1BG134400 Rh1BG134500 Rh1DG168500 Rh1DG168600 Rh4BG152600 Rh4BG215900 Rh4DG148000 Rh4DG213000 Rh5CG319800 Rh5CG326800 Rh5CG566100 Rh5CG566400 Rh5CG566600 Rh5DG296900 Rh5DG552900 Rh5DG553200 Rh6CG533800
rosa_wichuraiana	Rw0G001380 Rw0G010030 Rw0G015700 Rw1G013970 Rw4G012650 Rw4G018220 Rw5G026860 Rw5G048330 Rw5G048350 Rw6G044990 Rw6G045000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	747
AccB1I	GGYRCC	1 cut(s)	1364
AccII	CGCG	4 cut(s)	75, 300, 455, 1602
AciI	CCGC	8 cut(s)	73, 75, 220, 298, 455, 779, 857, 1439
AclWI	GGATC	1 cut(s)	1266
AcoI	YGGCCR	2 cut(s)	76, 258
AcuI	CTGAAG	1 cut(s)	1266
AcyI	GRCGYC	2 cut(s)	6, 318
AfaI	GTAC	2 cut(s)	1309, 1518
AfiI	CCNNNNNNNGG	5 cut(s)	79, 202, 256, 476, 938
AflIII	ACRYGT	1 cut(s)	1600
AgsI	TTSAA	3 cut(s)	838, 985, 1615
AjnI	CCWGG	4 cut(s)	104, 201, 1012, 1522
AjuI	GAANNNNNNNTTGG	4 cut(s)	1067, 1099, 1409, 1441
AluBI	AGCT	8 cut(s)	49, 121, 151, 369, 409, 1295, 1301, 1343
AluI	AGCT	8 cut(s)	49, 121, 151, 369, 409, 1295, 1301, 1343
Alw21I	GWGCWC	1 cut(s)	1504
Alw26I	GTCTC	1 cut(s)	1318
Alw44I	GTGCAC	1 cut(s)	1500
AlwI	GGATC	1 cut(s)	1266
AoxI	GGCC	9 cut(s)	28, 76, 81, 160, 192, 198, 204, 258, 521
ApaI	GGGCCC	1 cut(s)	85
ApaLI	GTGCAC	1 cut(s)	1500
ApeKI	GCWGC	4 cut(s)	46, 69, 1241, 1292
AspLEI	GCGC	2 cut(s)	297, 736
AspS9I	GGNCC	8 cut(s)	81, 82, 193, 199, 205, 306, 1009, 1526
AsuC2I	CCSGG	2 cut(s)	80, 197
AsuHPI	GGTGA	5 cut(s)	280, 547, 953, 1157, 1190
AsuNHI	GCTAGC	1 cut(s)	365
AvaII	GGWCC	3 cut(s)	306, 1009, 1526
AxyI	CCTNAGG	2 cut(s)	86, 323
BaeGI	GKGCMC	2 cut(s)	85, 1504
BalI	TGGCCA	1 cut(s)	260
BanI	GGYRCC	1 cut(s)	1364
BanII	GRGCYC	1 cut(s)	85
BbsI	GAAGAC	1 cut(s)	1586
Bbv12I	GWGCWC	1 cut(s)	1504
BbvI	GCAGC	4 cut(s)	58, 81, 1228, 1304
BccI	CCATC	6 cut(s)	269, 418, 646, 943, 1169, 1355
BceAI	ACGGC	2 cut(s)	30, 508
BcgI	CGANNNNNNTGC	2 cut(s)	1184, 1218
BciT130I	CCWGG	4 cut(s)	106, 203, 1014, 1524
BcnI	CCSGG	2 cut(s)	80, 197
BcoDI	GTCTC	1 cut(s)	1318
BfaI	CTAG	2 cut(s)	366, 1491
BfmI	CTRYAG	1 cut(s)	1296
BfuAI	ACCTGC	1 cut(s)	747
BglI	GCCNNNNNGGC	2 cut(s)	14, 191
BisI	GCNGC	9 cut(s)	47, 70, 73, 76, 298, 858, 1242, 1293, 1439
BlsI	GCNGC	9 cut(s)	48, 71, 74, 77, 299, 859, 1243, 1294, 1440
Bme1390I	CCNGG	6 cut(s)	80, 106, 197, 203, 1014, 1524
Bme18I	GGWCC	3 cut(s)	306, 1009, 1526
BmgT120I	GGNCC	8 cut(s)	81, 82, 193, 199, 205, 306, 1009, 1526
BmiI	GGNNCC	6 cut(s)	83, 110, 195, 1011, 1366, 1528
BmrFI	CCNGG	6 cut(s)	80, 106, 197, 203, 1014, 1524
BmsI	GCATC	6 cut(s)	26, 62, 321, 877, 1126, 1212
BmtI	GCTAGC	1 cut(s)	369
BpiI	GAAGAC	1 cut(s)	1586
BpmI	CTGGAG	2 cut(s)	1202, 1506
BpuEI	CTTGAG	3 cut(s)	83, 530, 1490
BpuMI	CCSGG	2 cut(s)	80, 197
BsaBI	GATNNNNATC	1 cut(s)	1263
BsaHI	GRCGYC	2 cut(s)	6, 318
BsaJI	CCNNGG	5 cut(s)	73, 195, 201, 1012, 1368
BsaXI	ACNNNNNCTCC	6 cut(s)	209, 239, 449, 479, 836, 866
Bsc4I	CCNNNNNNNGG	5 cut(s)	79, 202, 256, 476, 938
Bse118I	RCCGGY	2 cut(s)	532, 1288
Bse21I	CCTNAGG	2 cut(s)	86, 323
Bse8I	GATNNNNATC	1 cut(s)	1263
BseBI	CCWGG	4 cut(s)	106, 203, 1014, 1524
BseDI	CCNNGG	5 cut(s)	73, 195, 201, 1012, 1368
BseGI	GGATG	7 cut(s)	657, 697, 712, 829, 954, 1141, 1366
BseJI	GATNNNNATC	1 cut(s)	1263
BseLI	CCNNNNNNNGG	5 cut(s)	79, 202, 256, 476, 938
BseMII	CTCAG	2 cut(s)	314, 1089
BseRI	GAGGAG	6 cut(s)	86, 217, 275, 673, 797, 842
BseSI	GKGCMC	2 cut(s)	85, 1504
BseX3I	CGGCCG	1 cut(s)	76
BseXI	GCAGC	4 cut(s)	58, 81, 1228, 1304
BseYI	CCCAGC	3 cut(s)	117, 239, 971
Bsh1236I	CGCG	4 cut(s)	75, 300, 455, 1602
Bsh1285I	CGRYCG	2 cut(s)	79, 220
BshFI	GGCC	9 cut(s)	30, 78, 83, 162, 194, 200, 206, 260, 523
BshNI	GGYRCC	1 cut(s)	1364
BsiEI	CGRYCG	2 cut(s)	79, 220
BsiHKAI	GWGCWC	1 cut(s)	1504
BsiSI	CCGG	7 cut(s)	27, 79, 197, 309, 470, 533, 1289
BslFI	GGGAC	2 cut(s)	221, 1512
BslI	CCNNNNNNNGG	5 cut(s)	79, 202, 256, 476, 938
BsmAI	GTCTC	1 cut(s)	1318
BsmFI	GGGAC	2 cut(s)	221, 1512
BsnI	GGCC	9 cut(s)	30, 78, 83, 162, 194, 200, 206, 260, 523
Bsp120I	GGGCCC	1 cut(s)	81
Bsp1286I	GDGCHC	2 cut(s)	85, 1504
Bsp143I	GATC	4 cut(s)	213, 1206, 1258, 1264
BspACI	CCGC	8 cut(s)	73, 75, 220, 298, 455, 779, 857, 1439
BspANI	GGCC	9 cut(s)	30, 78, 83, 162, 194, 200, 206, 260, 523
BspCNI	CTCAG	2 cut(s)	315, 1090
BspFNI	CGCG	4 cut(s)	75, 300, 455, 1602
BspHI	TCATGA	2 cut(s)	763, 1261
BspLI	GGNNCC	6 cut(s)	83, 110, 195, 1011, 1366, 1528
BspMI	ACCTGC	1 cut(s)	747
BspOI	GCTAGC	1 cut(s)	369
BspPI	GGATC	1 cut(s)	1266
BspQI	GCTCTTC	1 cut(s)	1097
BspT107I	GGYRCC	1 cut(s)	1364
BsrFI	RCCGGY	2 cut(s)	532, 1288
BssAI	RCCGGY	2 cut(s)	532, 1288
BssECI	CCNNGG	5 cut(s)	73, 195, 201, 1012, 1368
BssMI	GATC	4 cut(s)	213, 1206, 1258, 1264
BssNI	GRCGYC	2 cut(s)	6, 318
BssT1I	CCWWGG	1 cut(s)	1368
Bst2UI	CCWGG	4 cut(s)	106, 203, 1014, 1524
Bst4CI	ACNGT	1 cut(s)	1312
Bst6I	CTCTTC	4 cut(s)	170, 1097, 1316, 1382
BstACI	GRCGYC	2 cut(s)	6, 318
BstC8I	GCNNGC	5 cut(s)	51, 183, 367, 1252, 1290
BstDEI	CTNAG	6 cut(s)	86, 323, 1098, 1317, 1466, 1629
BstDSI	CCRYGG	1 cut(s)	73
BstF5I	GGATG	7 cut(s)	657, 697, 712, 829, 954, 1141, 1366
BstFNI	CGCG	4 cut(s)	75, 300, 455, 1602
BstHHI	GCGC	2 cut(s)	297, 736
BstKTI	GATC	4 cut(s)	216, 1209, 1261, 1267
BstMAI	GTCTC	1 cut(s)	1318
BstMBI	GATC	4 cut(s)	213, 1206, 1258, 1264
BstMCI	CGRYCG	2 cut(s)	79, 220
BstMWI	GCNNNNNNNGC	7 cut(s)	14, 66, 75, 191, 529, 1247, 1298
BstNI	CCWGG	4 cut(s)	106, 203, 1014, 1524
BstNSI	RCATGY	1 cut(s)	178
BstSCI	CCNGG	6 cut(s)	78, 104, 195, 201, 1012, 1522
BstSFI	CTRYAG	1 cut(s)	1296
BstSLI	GKGCMC	2 cut(s)	85, 1504
BstUI	CGCG	4 cut(s)	75, 300, 455, 1602
BstV1I	GCAGC	4 cut(s)	58, 81, 1228, 1304
BstV2I	GAAGAC	1 cut(s)	1586
BstZI	CGGCCG	1 cut(s)	76
Bsu36I	CCTNAGG	2 cut(s)	86, 323
BsuRI	GGCC	9 cut(s)	30, 78, 83, 162, 194, 200, 206, 260, 523
BtgI	CCRYGG	1 cut(s)	73
BtsCI	GGATG	7 cut(s)	657, 697, 712, 829, 954, 1141, 1366
BveI	ACCTGC	1 cut(s)	747
Cac8I	GCNNGC	5 cut(s)	51, 183, 367, 1252, 1290
CciI	TCATGA	2 cut(s)	763, 1261
CfoI	GCGC	2 cut(s)	297, 736
Cfr10I	RCCGGY	2 cut(s)	532, 1288
Cfr13I	GGNCC	8 cut(s)	81, 82, 193, 199, 205, 306, 1009, 1526
Cfr42I	CCGCGG	1 cut(s)	76
CseI	GACGC	2 cut(s)	14, 326
Csp6I	GTAC	2 cut(s)	1308, 1517
CviAII	CATG	7 cut(s)	142, 175, 292, 361, 764, 1262, 1414
CviQI	GTAC	2 cut(s)	1308, 1517
DdeI	CTNAG	6 cut(s)	86, 323, 1098, 1317, 1466, 1629
DpnI	GATC	4 cut(s)	215, 1208, 1260, 1266
DpnII	GATC	4 cut(s)	213, 1206, 1258, 1264
EaeI	YGGCCR	2 cut(s)	76, 258
EagI	CGGCCG	1 cut(s)	76
Eam1104I	CTCTTC	4 cut(s)	170, 1097, 1316, 1382
EarI	CTCTTC	4 cut(s)	170, 1097, 1316, 1382
EciI	GGCGGA	1 cut(s)	794
EclXI	CGGCCG	1 cut(s)	76
Eco130I	CCWWGG	1 cut(s)	1368
Eco147I	AGGCCT	1 cut(s)	162
Eco24I	GRGCYC	1 cut(s)	85
Eco47I	GGWCC	3 cut(s)	306, 1009, 1526
Eco52I	CGGCCG	1 cut(s)	76
Eco57I	CTGAAG	1 cut(s)	1266
Eco81I	CCTNAGG	2 cut(s)	86, 323
EcoO109I	RGGNCCY	4 cut(s)	82, 193, 1009, 1526
EcoRII	CCWGG	4 cut(s)	104, 201, 1012, 1522
EcoT14I	CCWWGG	1 cut(s)	1368
EcoT38I	GRGCYC	1 cut(s)	85
ErhI	CCWWGG	1 cut(s)	1368
FaeI	CATG	7 cut(s)	145, 178, 295, 364, 767, 1265, 1417
FaqI	GGGAC	2 cut(s)	221, 1512
FatI	CATG	7 cut(s)	141, 174, 291, 360, 763, 1261, 1413
Fnu4HI	GCNGC	9 cut(s)	47, 70, 73, 76, 298, 858, 1242, 1293, 1439
FokI	GGATG	7 cut(s)	664, 704, 719, 836, 961, 1148, 1373
FriOI	GRGCYC	1 cut(s)	85
Fsp4HI	GCNGC	9 cut(s)	47, 70, 73, 76, 298, 858, 1242, 1293, 1439
FspBI	CTAG	2 cut(s)	366, 1491
GlaI	GCGC	2 cut(s)	296, 735
GluI	GCNGC	9 cut(s)	47, 70, 73, 76, 298, 858, 1242, 1293, 1439
GsaI	CCCAGC	3 cut(s)	121, 243, 975
GsuI	CTGGAG	2 cut(s)	1202, 1506
HaeIII	GGCC	9 cut(s)	30, 78, 83, 162, 194, 200, 206, 260, 523
HapII	CCGG	7 cut(s)	27, 79, 197, 309, 470, 533, 1289
HgaI	GACGC	2 cut(s)	14, 326
HhaI	GCGC	2 cut(s)	297, 736
Hin1I	GRCGYC	2 cut(s)	6, 318
Hin1II	CATG	7 cut(s)	145, 178, 295, 364, 767, 1265, 1417
Hin6I	GCGC	2 cut(s)	295, 734
HinP1I	GCGC	2 cut(s)	295, 734
HinfI	GANTC	8 cut(s)	23, 349, 357, 698, 880, 928, 1088, 1582
HpaII	CCGG	7 cut(s)	27, 79, 197, 309, 470, 533, 1289
HphI	GGTGA	5 cut(s)	280, 547, 953, 1157, 1190
Hpy166II	GTNNAC	1 cut(s)	1502
Hpy188I	TCNGA	4 cut(s)	22, 133, 1093, 1587
Hpy188III	TCNNGA	8 cut(s)	100, 154, 509, 764, 884, 1210, 1219, 1262
Hpy8I	GTNNAC	1 cut(s)	1502
Hpy99I	CGWCG	2 cut(s)	137, 320
HpyAV	CCTTC	6 cut(s)	535, 799, 841, 1000, 1054, 1393
HpyCH4III	ACNGT	1 cut(s)	1312
HpyCH4V	TGCA	7 cut(s)	60, 174, 993, 1139, 1225, 1394, 1502
HpyF10VI	GCNNNNNNNGC	7 cut(s)	14, 66, 75, 191, 529, 1247, 1298
HpyF3I	CTNAG	6 cut(s)	86, 323, 1098, 1317, 1466, 1629
Hsp92I	GRCGYC	2 cut(s)	6, 318
Hsp92II	CATG	7 cut(s)	145, 178, 295, 364, 767, 1265, 1417
HspAI	GCGC	2 cut(s)	295, 734
KroI	GCCGGC	1 cut(s)	1288
KroNI	GCCGGC	1 cut(s)	1290
KspI	CCGCGG	1 cut(s)	76
Kzo9I	GATC	4 cut(s)	213, 1206, 1258, 1264
LguI	GCTCTTC	1 cut(s)	1097
LmnI	GCTCC	2 cut(s)	114, 406
Lsp1109I	GCAGC	4 cut(s)	58, 81, 1228, 1304
LweI	GCATC	6 cut(s)	26, 62, 321, 877, 1126, 1212
MaeI	CTAG	2 cut(s)	366, 1491
MaeIII	GTNAC	1 cut(s)	1168
MalI	GATC	4 cut(s)	215, 1208, 1260, 1266
MboI	GATC	4 cut(s)	213, 1206, 1258, 1264
MhlI	GDGCHC	2 cut(s)	85, 1504
MlsI	TGGCCA	1 cut(s)	260
MluCI	AATT	5 cut(s)	391, 419, 484, 515, 1283
MluI	ACGCGT	1 cut(s)	1600
MluNI	TGGCCA	1 cut(s)	260
MlyI	GAGTC	1 cut(s)	1576
MmeI	TCCRAC	4 cut(s)	156, 648, 801, 822
Mox20I	TGGCCA	1 cut(s)	260
MroNI	GCCGGC	1 cut(s)	1288
MscI	TGGCCA	1 cut(s)	260
MseI	TTAA	4 cut(s)	434, 483, 621, 1029
Msp20I	TGGCCA	1 cut(s)	260
MspA1I	CMGCKG	1 cut(s)	75
MspI	CCGG	7 cut(s)	27, 79, 197, 309, 470, 533, 1289
MspR9I	CCNGG	6 cut(s)	80, 106, 197, 203, 1014, 1524
MvaI	CCWGG	4 cut(s)	106, 203, 1014, 1524
MvnI	CGCG	4 cut(s)	75, 300, 455, 1602
MwoI	GCNNNNNNNGC	7 cut(s)	14, 66, 75, 191, 529, 1247, 1298
NaeI	GCCGGC	1 cut(s)	1290
NciI	CCSGG	2 cut(s)	80, 197
NdeII	GATC	4 cut(s)	213, 1206, 1258, 1264
NgoMIV	GCCGGC	1 cut(s)	1288
NheI	GCTAGC	1 cut(s)	365
NlaIII	CATG	7 cut(s)	145, 178, 295, 364, 767, 1265, 1417
NlaIV	GGNNCC	6 cut(s)	83, 110, 195, 1011, 1366, 1528
NmeAIII	GCCGAG	2 cut(s)	254, 945
NspI	RCATGY	1 cut(s)	178
PagI	TCATGA	2 cut(s)	763, 1261
PceI	AGGCCT	1 cut(s)	162
PciSI	GCTCTTC	1 cut(s)	1097
PdiI	GCCGGC	1 cut(s)	1290
PfeI	GAWTC	7 cut(s)	23, 349, 357, 698, 880, 928, 1088
PkrI	GCNGC	9 cut(s)	48, 71, 74, 77, 299, 859, 1243, 1294, 1440
PleI	GAGTC	1 cut(s)	1576
PpsI	GAGTC	1 cut(s)	1576
PpuMI	RGGWCCY	2 cut(s)	1009, 1526
Psp5II	RGGWCCY	2 cut(s)	1009, 1526
Psp6I	CCWGG	4 cut(s)	104, 201, 1012, 1522
PspFI	CCCAGC	3 cut(s)	117, 239, 971
PspGI	CCWGG	4 cut(s)	104, 201, 1012, 1522
PspN4I	GGNNCC	6 cut(s)	83, 110, 195, 1011, 1366, 1528
PspOMI	GGGCCC	1 cut(s)	81
PspPI	GGNCC	8 cut(s)	81, 82, 193, 199, 205, 306, 1009, 1526
PspPPI	RGGWCCY	2 cut(s)	1009, 1526
RsaI	GTAC	2 cut(s)	1309, 1518
RsaNI	GTAC	2 cut(s)	1308, 1517
SacII	CCGCGG	1 cut(s)	76
SapI	GCTCTTC	1 cut(s)	1097
SaqAI	TTAA	4 cut(s)	434, 483, 621, 1029
SatI	GCNGC	9 cut(s)	47, 70, 73, 76, 298, 858, 1242, 1293, 1439
Sau3AI	GATC	4 cut(s)	213, 1206, 1258, 1264
Sau96I	GGNCC	8 cut(s)	81, 82, 193, 199, 205, 306, 1009, 1526
SchI	GAGTC	1 cut(s)	1576
ScrFI	CCNGG	6 cut(s)	80, 106, 197, 203, 1014, 1524
SduI	GDGCHC	2 cut(s)	85, 1504
SfaNI	GCATC	6 cut(s)	26, 62, 321, 877, 1126, 1212
SfcI	CTRYAG	1 cut(s)	1296
Sfr303I	CCGCGG	1 cut(s)	76
SgrBI	CCGCGG	1 cut(s)	76
SinI	GGWCC	3 cut(s)	306, 1009, 1526
SmlI	CTYRAG	3 cut(s)	98, 509, 1505
SmoI	CTYRAG	3 cut(s)	98, 509, 1505
Sse9I	AATT	5 cut(s)	391, 419, 484, 515, 1283
SseBI	AGGCCT	1 cut(s)	162
SsiI	CCGC	8 cut(s)	73, 75, 220, 298, 455, 779, 857, 1439
SspMI	CTAG	2 cut(s)	366, 1491
StuI	AGGCCT	1 cut(s)	162
StyD4I	CCNGG	6 cut(s)	78, 104, 195, 201, 1012, 1522
StyI	CCWWGG	1 cut(s)	1368
TaaI	ACNGT	1 cut(s)	1312
TaqI	TCGA	6 cut(s)	216, 264, 315, 752, 1194, 1211
TasI	AATT	5 cut(s)	391, 419, 484, 515, 1283
TauI	GCSGC	5 cut(s)	75, 78, 300, 860, 1441
TfiI	GAWTC	7 cut(s)	23, 349, 357, 698, 880, 928, 1088
Tru1I	TTAA	4 cut(s)	434, 483, 621, 1029
Tru9I	TTAA	4 cut(s)	434, 483, 621, 1029
TseI	GCWGC	4 cut(s)	46, 69, 1241, 1292
TspDTI	ATGAA	7 cut(s)	158, 349, 752, 780, 1176, 1362, 1430
VneI	GTGCAC	1 cut(s)	1500
VpaK11BI	GGWCC	3 cut(s)	306, 1009, 1526
XceI	RCATGY	1 cut(s)	178
XspI	CTAG	2 cut(s)	366, 1491

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.