MADS-box protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 690 |
| Acc36I | ACCTGC | 1 cut(s) | 553 |
| AciI | CCGC | 2 cut(s) | 319, 867 |
| AclWI | GGATC | 3 cut(s) | 95, 354, 976 |
| AcoI | YGGCCR | 2 cut(s) | 409, 991 |
| AcsI | RAATTY | 2 cut(s) | 239, 361 |
| AcyI | GRCGYC | 1 cut(s) | 687 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 412 |
| AgsI | TTSAA | 8 cut(s) | 180, 206, 353, 422, 671, 731, 776, 932 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 250 |
| AjnI | CCWGG | 1 cut(s) | 806 |
| Alw26I | GTCTC | 2 cut(s) | 665, 913 |
| AlwI | GGATC | 3 cut(s) | 95, 354, 976 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 642 |
| AoxI | GGCC | 2 cut(s) | 409, 991 |
| ApeKI | GCWGC | 6 cut(s) | 101, 265, 639, 642, 645, 758 |
| ApoI | RAATTY | 2 cut(s) | 239, 361 |
| AseI | ATTAAT | 1 cut(s) | 999 |
| AspLEI | GCGC | 2 cut(s) | 220, 550 |
| AspS9I | GGNCC | 3 cut(s) | 542, 653, 880 |
| AsuC2I | CCSGG | 2 cut(s) | 413, 884 |
| AsuHPI | GGTGA | 5 cut(s) | 427, 529, 791, 961, 969 |
| AvaII | GGWCC | 3 cut(s) | 542, 653, 880 |
| BbvCI | CCTCAGC | 1 cut(s) | 326 |
| BbvI | GCAGC | 6 cut(s) | 88, 277, 629, 651, 657, 745 |
| BccI | CCATC | 2 cut(s) | 508, 641 |
| BceAI | ACGGC | 2 cut(s) | 521, 1006 |
| BciT130I | CCWGG | 1 cut(s) | 808 |
| BclI | TGATCA | 1 cut(s) | 951 |
| BcnI | CCSGG | 2 cut(s) | 413, 884 |
| BcoDI | GTCTC | 2 cut(s) | 665, 913 |
| BfmI | CTRYAG | 2 cut(s) | 102, 643 |
| BfuAI | ACCTGC | 1 cut(s) | 553 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 55 |
| BisI | GCNGC | 7 cut(s) | 102, 266, 319, 640, 643, 646, 759 |
| BlpI | GCTNAGC | 1 cut(s) | 477 |
| BlsI | GCNGC | 7 cut(s) | 103, 267, 320, 641, 644, 647, 760 |
| Bme1390I | CCNGG | 3 cut(s) | 413, 808, 884 |
| Bme18I | GGWCC | 3 cut(s) | 542, 653, 880 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 250 |
| BmgT120I | GGNCC | 3 cut(s) | 542, 653, 880 |
| BmiI | GGNNCC | 3 cut(s) | 558, 655, 1027 |
| BmrFI | CCNGG | 3 cut(s) | 413, 808, 884 |
| BmrI | ACTGGG | 2 cut(s) | 651, 716 |
| BmsI | GCATC | 1 cut(s) | 388 |
| BmuI | ACTGGG | 2 cut(s) | 651, 716 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1040 |
| BpmI | CTGGAG | 1 cut(s) | 829 |
| Bpu10I | CCTNAGC | 1 cut(s) | 326 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 477 |
| BpuEI | CTTGAG | 2 cut(s) | 169, 326 |
| BpuMI | CCSGG | 2 cut(s) | 413, 884 |
| BsaBI | GATNNNNATC | 1 cut(s) | 26 |
| BsaHI | GRCGYC | 1 cut(s) | 687 |
| BsaJI | CCNNGG | 1 cut(s) | 406 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 412 |
| Bse1I | ACTGG | 4 cut(s) | 163, 396, 657, 711 |
| Bse3DI | GCAATG | 1 cut(s) | 858 |
| Bse8I | GATNNNNATC | 1 cut(s) | 26 |
| BseBI | CCWGG | 1 cut(s) | 808 |
| BseDI | CCNNGG | 1 cut(s) | 406 |
| BseGI | GGATG | 3 cut(s) | 202, 403, 519 |
| BseJI | GATNNNNATC | 1 cut(s) | 26 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 412 |
| BseMI | GCAATG | 1 cut(s) | 858 |
| BseMII | CTCAG | 3 cut(s) | 317, 468, 885 |
| BseNI | ACTGG | 4 cut(s) | 163, 396, 657, 711 |
| BseRI | GAGGAG | 4 cut(s) | 91, 94, 323, 606 |
| BseXI | GCAGC | 6 cut(s) | 88, 277, 629, 651, 657, 745 |
| BshFI | GGCC | 2 cut(s) | 411, 993 |
| BsiSI | CCGG | 3 cut(s) | 412, 560, 883 |
| BslFI | GGGAC | 1 cut(s) | 639 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 412 |
| BsmAI | GTCTC | 2 cut(s) | 665, 913 |
| BsmFI | GGGAC | 1 cut(s) | 639 |
| BsnI | GGCC | 2 cut(s) | 411, 993 |
| Bsp143I | GATC | 6 cut(s) | 21, 27, 87, 346, 951, 968 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 477 |
| BspACI | CCGC | 2 cut(s) | 319, 867 |
| BspANI | GGCC | 2 cut(s) | 411, 993 |
| BspCNI | CTCAG | 3 cut(s) | 318, 469, 884 |
| BspHI | TCATGA | 1 cut(s) | 1044 |
| BspLI | GGNNCC | 3 cut(s) | 558, 655, 1027 |
| BspMAI | CTGCAG | 2 cut(s) | 106, 647 |
| BspMI | ACCTGC | 1 cut(s) | 553 |
| BspPI | GGATC | 3 cut(s) | 95, 354, 976 |
| BspQI | GCTCTTC | 2 cut(s) | 308, 348 |
| BsrDI | GCAATG | 1 cut(s) | 858 |
| BsrI | ACTGG | 4 cut(s) | 163, 396, 657, 711 |
| BssECI | CCNNGG | 1 cut(s) | 406 |
| BssMI | GATC | 6 cut(s) | 21, 27, 87, 346, 951, 968 |
| BssNI | GRCGYC | 1 cut(s) | 687 |
| BssT1I | CCWWGG | 1 cut(s) | 406 |
| Bst2UI | CCWGG | 1 cut(s) | 808 |
| Bst4CI | ACNGT | 4 cut(s) | 252, 772, 958, 1015 |
| Bst6I | CTCTTC | 2 cut(s) | 308, 348 |
| BstACI | GRCGYC | 1 cut(s) | 687 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 893 |
| BstC8I | GCNNGC | 4 cut(s) | 51, 164, 323, 403 |
| BstDEI | CTNAG | 5 cut(s) | 326, 426, 477, 713, 871 |
| BstF5I | GGATG | 3 cut(s) | 202, 403, 519 |
| BstHHI | GCGC | 2 cut(s) | 220, 550 |
| BstKTI | GATC | 6 cut(s) | 24, 30, 90, 349, 954, 971 |
| BstMAI | GTCTC | 2 cut(s) | 665, 913 |
| BstMBI | GATC | 6 cut(s) | 21, 27, 87, 346, 951, 968 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 55, 556, 626, 645, 893 |
| BstNI | CCWGG | 1 cut(s) | 808 |
| BstNSI | RCATGY | 1 cut(s) | 607 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1040 |
| BstSCI | CCNGG | 3 cut(s) | 411, 806, 882 |
| BstSFI | CTRYAG | 2 cut(s) | 102, 643 |
| BstV1I | GCAGC | 6 cut(s) | 88, 277, 629, 651, 657, 745 |
| BstX2I | RGATCY | 2 cut(s) | 87, 346 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 807 |
| BstYI | RGATCY | 2 cut(s) | 87, 346 |
| BsuRI | GGCC | 2 cut(s) | 411, 993 |
| BtsCI | GGATG | 3 cut(s) | 202, 403, 519 |
| BtsI | GCAGTG | 1 cut(s) | 655 |
| BtsIMutI | CAGTG | 3 cut(s) | 655, 843, 879 |
| BveI | ACCTGC | 1 cut(s) | 553 |
| Cac8I | GCNNGC | 4 cut(s) | 51, 164, 323, 403 |
| CaiI | CAGNNNCTG | 1 cut(s) | 642 |
| CciI | TCATGA | 1 cut(s) | 1044 |
| CfoI | GCGC | 2 cut(s) | 220, 550 |
| Cfr13I | GGNCC | 3 cut(s) | 542, 653, 880 |
| CviAII | CATG | 2 cut(s) | 604, 1045 |
| DdeI | CTNAG | 5 cut(s) | 326, 426, 477, 713, 871 |
| DpnI | GATC | 6 cut(s) | 23, 29, 89, 348, 953, 970 |
| DpnII | GATC | 6 cut(s) | 21, 27, 87, 346, 951, 968 |
| DriI | GACNNNNNGTC | 1 cut(s) | 250 |
| EaeI | YGGCCR | 2 cut(s) | 409, 991 |
| Eam1104I | CTCTTC | 2 cut(s) | 308, 348 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 250 |
| EarI | CTCTTC | 2 cut(s) | 308, 348 |
| EciI | GGCGGA | 1 cut(s) | 856 |
| Eco130I | CCWWGG | 1 cut(s) | 406 |
| Eco47I | GGWCC | 3 cut(s) | 542, 653, 880 |
| EcoRII | CCWGG | 1 cut(s) | 806 |
| EcoT14I | CCWWGG | 1 cut(s) | 406 |
| ErhI | CCWWGG | 1 cut(s) | 406 |
| FaeI | CATG | 2 cut(s) | 607, 1048 |
| FaqI | GGGAC | 1 cut(s) | 639 |
| FatI | CATG | 2 cut(s) | 603, 1044 |
| FbaI | TGATCA | 1 cut(s) | 951 |
| Fnu4HI | GCNGC | 7 cut(s) | 102, 266, 319, 640, 643, 646, 759 |
| FokI | GGATG | 3 cut(s) | 209, 410, 526 |
| Fsp4HI | GCNGC | 7 cut(s) | 102, 266, 319, 640, 643, 646, 759 |
| GlaI | GCGC | 2 cut(s) | 219, 549 |
| GluI | GCNGC | 7 cut(s) | 102, 266, 319, 640, 643, 646, 759 |
| GsuI | CTGGAG | 1 cut(s) | 829 |
| HaeIII | GGCC | 2 cut(s) | 411, 993 |
| HapII | CCGG | 3 cut(s) | 412, 560, 883 |
| HhaI | GCGC | 2 cut(s) | 220, 550 |
| Hin1I | GRCGYC | 1 cut(s) | 687 |
| Hin1II | CATG | 2 cut(s) | 607, 1048 |
| Hin6I | GCGC | 2 cut(s) | 218, 548 |
| HinP1I | GCGC | 2 cut(s) | 218, 548 |
| HindIII | AAGCTT | 1 cut(s) | 164 |
| HinfI | GANTC | 3 cut(s) | 125, 614, 928 |
| HpaII | CCGG | 3 cut(s) | 412, 560, 883 |
| HphI | GGTGA | 5 cut(s) | 427, 529, 791, 961, 969 |
| Hpy166II | GTNNAC | 1 cut(s) | 977 |
| Hpy188I | TCNGA | 6 cut(s) | 130, 290, 613, 685, 927, 963 |
| Hpy188III | TCNNGA | 6 cut(s) | 25, 31, 350, 528, 668, 1045 |
| Hpy8I | GTNNAC | 1 cut(s) | 977 |
| Hpy99I | CGWCG | 1 cut(s) | 689 |
| HpyAV | CCTTC | 4 cut(s) | 76, 187, 593, 770 |
| HpyCH4III | ACNGT | 4 cut(s) | 252, 772, 958, 1015 |
| HpyCH4IV | ACGT | 1 cut(s) | 687 |
| HpyCH4V | TGCA | 8 cut(s) | 53, 104, 265, 376, 401, 629, 645, 761 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 55, 556, 626, 645, 893 |
| HpyF3I | CTNAG | 5 cut(s) | 326, 426, 477, 713, 871 |
| HpySE526I | ACGT | 1 cut(s) | 687 |
| Hsp92I | GRCGYC | 1 cut(s) | 687 |
| Hsp92II | CATG | 2 cut(s) | 607, 1048 |
| HspAI | GCGC | 2 cut(s) | 218, 548 |
| Ksp22I | TGATCA | 1 cut(s) | 951 |
| Kzo9I | GATC | 6 cut(s) | 21, 27, 87, 346, 951, 968 |
| LguI | GCTCTTC | 2 cut(s) | 308, 348 |
| LmnI | GCTCC | 4 cut(s) | 473, 556, 686, 817 |
| Lsp1109I | GCAGC | 6 cut(s) | 88, 277, 629, 651, 657, 745 |
| LweI | GCATC | 1 cut(s) | 388 |
| MaeII | ACGT | 1 cut(s) | 687 |
| MaeIII | GTNAC | 4 cut(s) | 61, 688, 751, 766 |
| MalI | GATC | 6 cut(s) | 23, 29, 89, 348, 953, 970 |
| MboI | GATC | 6 cut(s) | 21, 27, 87, 346, 951, 968 |
| MboII | GAAGA | 8 cut(s) | 31, 46, 325, 365, 608, 683, 743, 1060 |
| MflI | RGATCY | 2 cut(s) | 87, 346 |
| MluCI | AATT | 5 cut(s) | 239, 361, 831, 996, 1000 |
| MmeI | TCCRAC | 1 cut(s) | 708 |
| MseI | TTAA | 5 cut(s) | 92, 462, 573, 899, 999 |
| MslI | CAYNNNNRTG | 1 cut(s) | 225 |
| MspA1I | CMGCKG | 3 cut(s) | 325, 642, 758 |
| MspI | CCGG | 3 cut(s) | 412, 560, 883 |
| MspR9I | CCNGG | 3 cut(s) | 413, 808, 884 |
| MvaI | CCWGG | 1 cut(s) | 808 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 55, 556, 626, 645, 893 |
| NciI | CCSGG | 2 cut(s) | 413, 884 |
| NdeII | GATC | 6 cut(s) | 21, 27, 87, 346, 951, 968 |
| NlaIII | CATG | 2 cut(s) | 607, 1048 |
| NlaIV | GGNNCC | 3 cut(s) | 558, 655, 1027 |
| NmuCI | GTSAC | 2 cut(s) | 61, 688 |
| NspI | RCATGY | 1 cut(s) | 607 |
| PagI | TCATGA | 1 cut(s) | 1044 |
| PciSI | GCTCTTC | 2 cut(s) | 308, 348 |
| PfeI | GAWTC | 3 cut(s) | 125, 614, 928 |
| PfoI | TCCNGGA | 1 cut(s) | 806 |
| PkrI | GCNGC | 7 cut(s) | 103, 267, 320, 641, 644, 647, 760 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1040 |
| PshBI | ATTAAT | 1 cut(s) | 999 |
| Psp6I | CCWGG | 1 cut(s) | 806 |
| PspGI | CCWGG | 1 cut(s) | 806 |
| PspN4I | GGNNCC | 3 cut(s) | 558, 655, 1027 |
| PspPI | GGNCC | 3 cut(s) | 542, 653, 880 |
| PstI | CTGCAG | 2 cut(s) | 106, 647 |
| PstNI | CAGNNNCTG | 1 cut(s) | 642 |
| PsuI | RGATCY | 2 cut(s) | 87, 346 |
| PvuII | CAGCTG | 3 cut(s) | 325, 642, 758 |
| RseI | CAYNNNNRTG | 1 cut(s) | 225 |
| SapI | GCTCTTC | 2 cut(s) | 308, 348 |
| SaqAI | TTAA | 5 cut(s) | 92, 462, 573, 899, 999 |
| SatI | GCNGC | 7 cut(s) | 102, 266, 319, 640, 643, 646, 759 |
| Sau3AI | GATC | 6 cut(s) | 21, 27, 87, 346, 951, 968 |
| Sau96I | GGNCC | 3 cut(s) | 542, 653, 880 |
| ScrFI | CCNGG | 3 cut(s) | 413, 808, 884 |
| SfaNI | GCATC | 1 cut(s) | 388 |
| SfcI | CTRYAG | 2 cut(s) | 102, 643 |
| SinI | GGWCC | 3 cut(s) | 542, 653, 880 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 225 |
| SmlI | CTYRAG | 2 cut(s) | 184, 305 |
| SmoI | CTYRAG | 2 cut(s) | 184, 305 |
| Sse9I | AATT | 5 cut(s) | 239, 361, 831, 996, 1000 |
| SsiI | CCGC | 2 cut(s) | 319, 867 |
| SspI | AATATT | 2 cut(s) | 538, 580 |
| StyD4I | CCNGG | 3 cut(s) | 411, 806, 882 |
| StyI | CCWWGG | 1 cut(s) | 406 |
| TaaI | ACNGT | 4 cut(s) | 252, 772, 958, 1015 |
| TaiI | ACGT | 1 cut(s) | 690 |
| TaqI | TCGA | 1 cut(s) | 725 |
| TasI | AATT | 5 cut(s) | 239, 361, 831, 996, 1000 |
| TauI | GCSGC | 1 cut(s) | 321 |
| TfiI | GAWTC | 3 cut(s) | 125, 614, 928 |
| Tru1I | TTAA | 5 cut(s) | 92, 462, 573, 899, 999 |
| Tru9I | TTAA | 5 cut(s) | 92, 462, 573, 899, 999 |
| TscAI | CASTG | 3 cut(s) | 655, 843, 879 |
| TseFI | GTSAC | 2 cut(s) | 61, 688 |
| TseI | GCWGC | 6 cut(s) | 101, 265, 639, 642, 645, 758 |
| Tsp45I | GTSAC | 2 cut(s) | 61, 688 |
| TspDTI | ATGAA | 4 cut(s) | 17, 206, 350, 1061 |
| TspGWI | ACGGA | 1 cut(s) | 569 |
| TspRI | CASTG | 3 cut(s) | 655, 843, 879 |
| VpaK11BI | GGWCC | 3 cut(s) | 542, 653, 880 |
| VspI | ATTAAT | 1 cut(s) | 999 |
| XapI | RAATTY | 2 cut(s) | 239, 361 |
| XceI | RCATGY | 1 cut(s) | 607 |
| ZraI | GACGTC | 1 cut(s) | 688 |