Rh7AG218200
MADS Family

MADS-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0000389
Physical Location & Seq
Forward (+)
20298014 .. 20313125
15112 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG218200.1

Sequence Viewer

Length: 1032 bp
ATGATGAAGGGGCTCTCAATAGTCCCTAGGCTAACTAAGAGAACGAGGACTGGTGGAGCCGCCTCCTTACAACAGCCTAGTCAAAAGGGGTCCAAGCCTGGATGGTCCAAGTTCTCTCGATCATCAAAGTTATCGTCTCAAGGCTCTGGTACTGGTACAAGTGCCCAGGTGAAGCAAGACACTGCTGCTCATAAGTTAGCTAAGAGTCTGAAGAGGAGAGGTGTGGATGAGGACTACATCCCTCAAATGGCGTTTACTATTTCACCTCCATTTCCGCTTGCTGTCAACTCTGGCGAGACCCAAAGCTTCAGTTTCTGCACCACGAAGCTAGCTGCTATGAATAAGATAAAGATTGAGAAGATAGAGAACTTGCCGGCGAGGCAGGTGACGTTTTCAAAGAGGAGACAAGGGCTTTTCAAGAAAGCCGGAGCGTTATCAGTTCTCTGCGACGCTGAGGTTGCTGTCGTTGTCTTTTCTTCTACTGGCAAGCTCTATGAGTCCTCCAGCTCCAGTACGAAGGATGTCATTGCAAGGTACGAATTGCACACTGAAGATGTGGAAAAGGGCGACCAGCAGCCACCTCCTGAGCTCCAGCTGGAGATTAATGAGTGCATGAGGTTGAATAAGGAACTTGCGGACAAGATCCTCGAGCTAGGGCGGATGGAGGGGCAGGATCTAGAAGAGCTGAATATAGATGAATTGCAGAGATTGGAGAATAGGATTGAAGGAGGACTCAGCCGTGTGCTTCAAACGAAGGATAAAAGGATTATGAGTCAGATTCTGGCACTTGAAAAAAAGGGAGCAGAGTTGACAGAAGCAAACAACCAATTAAGGCAATGGTTAGGGATGCTATCCAATGGAGATGGAAATAGAGCTGGTGGTGTTGCTTTGGAGTCGGAGATCTCAACTGATGAAGAAGAAGGTATGGCATCGGAATTTGTGGTCGGCTGCTACAGTACTGGTTCTTCGACTTCTTCCCTTGATGATGACTCCTCTGACAACCCCTTATCTCTTAAACTTGGTTGGGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000060 GO:0000900 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006417 GO:0006606 GO:0006810 GO:0006886 GO:0006913 GO:0007275 GO:0008104 GO:0008150 GO:0009266 GO:0009628 GO:0009719 GO:0009725 GO:0009739 GO:0009791 GO:0009888 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009908 GO:0009909 GO:0009910 GO:0010033 GO:0010073 GO:0010074 GO:0010077 GO:0010219 GO:0010220 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0015031 GO:0015833 GO:0017038 GO:0017148 GO:0019219 GO:0019222 GO:0019827 GO:0022414 GO:0030371 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0033036 GO:0033365 GO:0033993 GO:0034248 GO:0034249 GO:0034504 GO:0034613 GO:0040034 GO:0042221 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045182 GO:0045184 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046907 GO:0046982 GO:0046983 GO:0048367 GO:0048438 GO:0048506 GO:0048507 GO:0048509 GO:0048510 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048581 GO:0048583 GO:0048584 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051169 GO:0051170 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051234 GO:0051239 GO:0051241 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0051254 GO:0051641 GO:0051649 GO:0060255 GO:0061458 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0080090 GO:0080134 GO:0090079 GO:0090567 GO:0097159 GO:0098727 GO:0140110 GO:1901363 GO:1901700 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04013 ko04022 ko04371 ko05418 map04013 map04022 map04371 map05418
Pfam Domains
Protein Families
K-box SRF-TF

Protein Analysis

343

Amino Acids

37.41

Weight (kDa)

6.29

Isoelectric Point (pI)

57.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SRF-TF PF00319 120 - 166 8.7e-24 SRF-type transcription factor (DNA-binding and dimerisation domain)
K-box PF01486 202 - 280 6.4e-13 K-box region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000389)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03630 FvH4_4g27110 FvH4_4g27110 FvH4_4g27110 FvH4_4g27110 FvH4_4g27110 FvH4_4g27110 FvH4_4g27110 FvH4_4g27110 FvH4_4g27110 FvH4_4g27110 FvH4_4g27110 FvH4_4g27110 FvH4_4g27440 FvH4_4g27440 FvH4_4g27440 FvH4_4g27440 FvH4_4g27440 FvH4_4g27440 FvH4_4g27440 FvH4_4g27440 FvH4_4g27440 FvH4_4g27440 FvH4_4g27440 FvH4_5g35400 FvH4_5g35400 FvH4_5g35400 FvH4_5g35400 FvH4_5g35401 FvH4_5g35401
malus_domestica MD08G1196900.v1.1 MD08G1197000.v1.1 MD08G1197200.v1.1 MD08G1197300.v1.1 MD15G1384500.v1.1 MD15G1384600.v1.1
prunus_persica Prupe.1G531100_v2.0.a1 Prupe.1G531100_v2.0.a1 Prupe.1G531400_v2.0.a1 Prupe.1G531600_v2.0.a1 Prupe.1G531700_v2.0.a1
pyrus_communis pycom08g16910 pycom08g16940 pycom08g16960 pycom15g34480 pycom15g34490
rosa_chinensis RchiOBHm_Chr4g0434911 RchiOBHm_Chr7g0205051 RchiOBHm_Chr7g0205061 RchiOBHm_Chr7g0205071 RchiOBHm_Chr7g0236801 RchiOBHm_Chr7g0236811
rosa_laevigata RLG00000001060 RLG00000003404 RLG00000003405 RLG00000006636
rosa_multiflora Rmu_sc0008447.1_g000001 Rmu_sc0008851.1_g000011 Rmu_sc0008851.1_g000015
rosa_roxburghii Rroxscaffold_3G00224810 Rroxscaffold_3G00224820 Rroxscaffold_3G00252600 Rroxscaffold_5G00376120
rosa_rugosa Rorug04G0280500 Rorug04G0280600 Rorug04G0280700 Rorug04G0280800 Rorug04G0280900 Rorug04G0281000 Rorug04G0281100 Rorug07G0087100 Rorug07G0087200 Rorug07G0087200 Rorug07G0087300 Rorug07G0299300 Rorug07G0299400 Rorug07G0299500
rosa_samantha Rh4AG336000 Rh4BG344500 Rh4CG358900 Rh4DG338500 Rh7AG218200 Rh7AG218300 Rh7AG454500 Rh7AG454700 Rh7BG214900 Rh7BG224100 Rh7BG425700 Rh7BG425800 Rh7BG425900 Rh7CG231500 Rh7CG473200 Rh7CG473300 Rh7DG225600 Rh7DG225800 Rh7DG442500 Rh7DG442600
rosa_wichuraiana Rw4G029320 Rw7G018890 Rw7G018930 Rw7G037730 Rw7G037740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 373
Acc36I ACCTGC 1 cut(s) 373
AciI CCGC 4 cut(s) 60, 275, 635, 658
AclWI GGATC 2 cut(s) 637, 681
AcsI RAATTY 1 cut(s) 935
AcuI CTGAAG 3 cut(s) 230, 292, 570
AfaI GTAC 5 cut(s) 151, 157, 514, 536, 958
AfiI CCNNNNNNNGG 1 cut(s) 247
AgsI TTSAA 6 cut(s) 396, 418, 622, 725, 749, 791
AjnI CCWGG 2 cut(s) 97, 165
Alw21I GWGCWC 1 cut(s) 591
Alw26I GTCTC 3 cut(s) 141, 290, 397
AlwI GGATC 2 cut(s) 637, 681
AlwNI CAGNNNCTG 2 cut(s) 315, 781
Ama87I CYCGRG 1 cut(s) 647
ApeKI GCWGC 4 cut(s) 185, 332, 574, 948
ApoI RAATTY 1 cut(s) 935
ArsI GACNNNNNNTTYG 2 cut(s) 119, 151
AseI ATTAAT 1 cut(s) 603
AspA2I CCTAGG 1 cut(s) 26
AspS9I GGNCC 2 cut(s) 90, 105
AsuHPI GGTGA 3 cut(s) 181, 255, 397
AsuNHI GCTAGC 1 cut(s) 328
AvaI CYCGRG 1 cut(s) 647
AvaII GGWCC 2 cut(s) 90, 105
AvrII CCTAGG 1 cut(s) 26
BaeGI GKGCMC 1 cut(s) 166
BanII GRGCYC 2 cut(s) 15, 591
BarI GAAGNNNNNNTAC 2 cut(s) 949, 981
Bbv12I GWGCWC 1 cut(s) 591
BbvCI CCTCAGC 1 cut(s) 453
BbvI GCAGC 4 cut(s) 172, 319, 586, 935
BccI CCATC 3 cut(s) 96, 655, 857
BceAI ACGGC 1 cut(s) 723
BciT130I CCWGG 2 cut(s) 99, 167
BcoDI GTCTC 3 cut(s) 141, 290, 397
BfaI CTAG 5 cut(s) 27, 78, 329, 653, 677
BfmI CTRYAG 1 cut(s) 952
BfuAI ACCTGC 1 cut(s) 373
BglI GCCNNNNNGGC 1 cut(s) 379
BglII AGATCT 1 cut(s) 900
BisI GCNGC 5 cut(s) 60, 186, 333, 575, 949
BlnI CCTAGG 1 cut(s) 26
BlsI GCNGC 5 cut(s) 61, 187, 334, 576, 950
BmcAI AGTACT 1 cut(s) 958
Bme1390I CCNGG 2 cut(s) 99, 167
Bme18I GGWCC 2 cut(s) 90, 105
BmeT110I CYCGRG 1 cut(s) 647
BmgT120I GGNCC 2 cut(s) 90, 105
BmiI GGNNCC 2 cut(s) 58, 91
BmrFI CCNGG 2 cut(s) 99, 167
BmsI GCATC 2 cut(s) 837, 938
BmtI GCTAGC 1 cut(s) 332
BpmI CTGGAG 4 cut(s) 487, 493, 575, 617
Bpu10I CCTNAGC 2 cut(s) 453, 585
BpuEI CTTGAG 1 cut(s) 123
BsaI GGTCTC 1 cut(s) 290
BsaJI CCNNGG 2 cut(s) 26, 165
Bsc4I CCNNNNNNNGG 1 cut(s) 247
Bse118I RCCGGY 1 cut(s) 373
Bse1I ACTGG 5 cut(s) 55, 157, 487, 510, 964
Bse3DI GCAATG 2 cut(s) 525, 842
BseBI CCWGG 2 cut(s) 99, 167
BseDI CCNNGG 2 cut(s) 26, 165
BseGI GGATG 6 cut(s) 107, 232, 237, 526, 666, 852
BseLI CCNNNNNNNGG 1 cut(s) 247
BseMI GCAATG 2 cut(s) 525, 842
BseMII CTCAG 3 cut(s) 444, 576, 748
BseNI ACTGG 5 cut(s) 55, 157, 487, 510, 964
BseRI GAGGAG 3 cut(s) 229, 415, 982
BseSI GKGCMC 1 cut(s) 166
BseXI GCAGC 4 cut(s) 172, 319, 586, 935
BsgI GTGCAG 1 cut(s) 301
BsiHKAI GWGCWC 1 cut(s) 591
BsiHKCI CYCGRG 1 cut(s) 647
BsiSI CCGG 2 cut(s) 374, 426
BslFI GGGAC 1 cut(s) 8
BslI CCNNNNNNNGG 1 cut(s) 247
BsmAI GTCTC 3 cut(s) 141, 290, 397
BsmBI CGTCTC 1 cut(s) 141
BsmFI GGGAC 1 cut(s) 8
Bso31I GGTCTC 1 cut(s) 290
BsoBI CYCGRG 1 cut(s) 647
Bsp1286I GDGCHC 3 cut(s) 15, 166, 591
Bsp143I GATC 4 cut(s) 119, 642, 673, 900
BspACI CCGC 4 cut(s) 60, 275, 635, 658
BspCNI CTCAG 3 cut(s) 445, 577, 747
BspLI GGNNCC 2 cut(s) 58, 91
BspMI ACCTGC 1 cut(s) 373
BspOI GCTAGC 1 cut(s) 332
BspPI GGATC 2 cut(s) 637, 681
BspQI GCTCTTC 1 cut(s) 675
BspTNI GGTCTC 1 cut(s) 290
BsrDI GCAATG 2 cut(s) 525, 842
BsrFI RCCGGY 1 cut(s) 373
BsrI ACTGG 5 cut(s) 55, 157, 487, 510, 964
BssAI RCCGGY 1 cut(s) 373
BssECI CCNNGG 2 cut(s) 26, 165
BssMI GATC 4 cut(s) 119, 642, 673, 900
BssT1I CCWWGG 1 cut(s) 26
Bst2UI CCWGG 2 cut(s) 99, 167
Bst4CI ACNGT 1 cut(s) 956
Bst6I CTCTTC 2 cut(s) 206, 675
BstC8I GCNNGC 4 cut(s) 279, 330, 375, 488
BstDEI CTNAG 5 cut(s) 36, 201, 453, 585, 734
BstF5I GGATG 6 cut(s) 107, 232, 237, 526, 666, 852
BstKTI GATC 4 cut(s) 122, 645, 676, 903
BstMAI GTCTC 3 cut(s) 141, 290, 397
BstMBI GATC 4 cut(s) 119, 642, 673, 900
BstMWI GCNNNNNNNGC 2 cut(s) 379, 458
BstNI CCWGG 2 cut(s) 99, 167
BstSCI CCNGG 2 cut(s) 97, 165
BstSFI CTRYAG 1 cut(s) 952
BstSLI GKGCMC 1 cut(s) 166
BstV1I GCAGC 4 cut(s) 172, 319, 586, 935
BstX2I RGATCY 3 cut(s) 642, 673, 900
BstYI RGATCY 3 cut(s) 642, 673, 900
BtsCI GGATG 6 cut(s) 107, 232, 237, 526, 666, 852
BtsI GCAGTG 1 cut(s) 180
BtsIMutI CAGTG 2 cut(s) 180, 546
BveI ACCTGC 1 cut(s) 373
Cac8I GCNNGC 4 cut(s) 279, 330, 375, 488
CaiI CAGNNNCTG 2 cut(s) 315, 781
Cfr10I RCCGGY 1 cut(s) 373
Cfr13I GGNCC 2 cut(s) 90, 105
CseI GACGC 1 cut(s) 458
Csp6I GTAC 5 cut(s) 150, 156, 513, 535, 957
CviAII CATG 1 cut(s) 613
CviQI GTAC 5 cut(s) 150, 156, 513, 535, 957
DdeI CTNAG 5 cut(s) 36, 201, 453, 585, 734
DpnI GATC 4 cut(s) 121, 644, 675, 902
DpnII GATC 4 cut(s) 119, 642, 673, 900
Eam1104I CTCTTC 2 cut(s) 206, 675
EarI CTCTTC 2 cut(s) 206, 675
EciI GGCGGA 1 cut(s) 673
Ecl136II GAGCTC 1 cut(s) 589
Eco130I CCWWGG 1 cut(s) 26
Eco24I GRGCYC 2 cut(s) 15, 591
Eco31I GGTCTC 1 cut(s) 290
Eco47I GGWCC 2 cut(s) 90, 105
Eco53kI GAGCTC 1 cut(s) 589
Eco57I CTGAAG 3 cut(s) 230, 292, 570
Eco88I CYCGRG 1 cut(s) 647
EcoICRI GAGCTC 1 cut(s) 589
EcoRII CCWGG 2 cut(s) 97, 165
EcoT14I CCWWGG 1 cut(s) 26
EcoT38I GRGCYC 2 cut(s) 15, 591
ErhI CCWWGG 1 cut(s) 26
Esp3I CGTCTC 1 cut(s) 141
FaeI CATG 1 cut(s) 616
FaiI YATR 7 cut(s) 192, 338, 495, 614, 692, 770, 926
FaqI GGGAC 1 cut(s) 8
FatI CATG 1 cut(s) 612
Fnu4HI GCNGC 5 cut(s) 60, 186, 333, 575, 949
FokI GGATG 6 cut(s) 114, 224, 239, 533, 673, 859
FriOI GRGCYC 2 cut(s) 15, 591
Fsp4HI GCNGC 5 cut(s) 60, 186, 333, 575, 949
FspBI CTAG 5 cut(s) 27, 78, 329, 653, 677
GluI GCNGC 5 cut(s) 60, 186, 333, 575, 949
GsuI CTGGAG 4 cut(s) 487, 493, 575, 617
HapII CCGG 2 cut(s) 374, 426
HgaI GACGC 1 cut(s) 458
Hin1II CATG 1 cut(s) 616
HincII GTYRAC 2 cut(s) 286, 810
HindII GTYRAC 2 cut(s) 286, 810
HindIII AAGCTT 1 cut(s) 304
HinfI GANTC 7 cut(s) 205, 497, 732, 772, 778, 893, 989
HpaII CCGG 2 cut(s) 374, 426
HphI GGTGA 3 cut(s) 181, 255, 397
Hpy166II GTNNAC 3 cut(s) 255, 286, 810
Hpy188I TCNGA 5 cut(s) 210, 777, 898, 934, 997
Hpy188III TCNNGA 4 cut(s) 117, 418, 584, 677
Hpy8I GTNNAC 3 cut(s) 255, 286, 810
Hpy99I CGWCG 1 cut(s) 452
HpyAV CCTTC 4 cut(s) 511, 719, 748, 914
HpyCH4III ACNGT 1 cut(s) 956
HpyCH4IV ACGT 1 cut(s) 389
HpyCH4V TGCA 5 cut(s) 318, 530, 544, 612, 703
HpyF10VI GCNNNNNNNGC 2 cut(s) 379, 458
HpyF3I CTNAG 5 cut(s) 36, 201, 453, 585, 734
HpySE526I ACGT 1 cut(s) 389
Hsp92II CATG 1 cut(s) 616
KroI GCCGGC 1 cut(s) 373
KroNI GCCGGC 1 cut(s) 375
Kzo9I GATC 4 cut(s) 119, 642, 673, 900
LguI GCTCTTC 1 cut(s) 675
LmnI GCTCC 5 cut(s) 56, 428, 512, 594, 800
Lsp1109I GCAGC 4 cut(s) 172, 319, 586, 935
LweI GCATC 2 cut(s) 837, 938
MaeI CTAG 5 cut(s) 27, 78, 329, 653, 677
MaeII ACGT 1 cut(s) 389
MaeIII GTNAC 1 cut(s) 385
MalI GATC 4 cut(s) 121, 644, 675, 902
MboI GATC 4 cut(s) 119, 642, 673, 900
MboII GAAGA 9 cut(s) 223, 370, 468, 563, 692, 926, 929, 957, 966
MflI RGATCY 3 cut(s) 642, 673, 900
MhlI GDGCHC 3 cut(s) 15, 166, 591
MluCI AATT 4 cut(s) 539, 698, 827, 935
MlyI GAGTC 6 cut(s) 214, 506, 726, 781, 902, 983
MmeI TCCRAC 1 cut(s) 876
MroNI GCCGGC 1 cut(s) 373
MseI TTAA 3 cut(s) 603, 830, 1014
MspA1I CMGCKG 1 cut(s) 595
MspI CCGG 2 cut(s) 374, 426
MspR9I CCNGG 2 cut(s) 99, 167
MvaI CCWGG 2 cut(s) 99, 167
MwoI GCNNNNNNNGC 2 cut(s) 379, 458
NaeI GCCGGC 1 cut(s) 375
NdeII GATC 4 cut(s) 119, 642, 673, 900
NgoMIV GCCGGC 1 cut(s) 373
NheI GCTAGC 1 cut(s) 328
NlaIII CATG 1 cut(s) 616
NlaIV GGNNCC 2 cut(s) 58, 91
NmuCI GTSAC 1 cut(s) 385
PaeR7I CTCGAG 1 cut(s) 647
PaqCI CACCTGC 1 cut(s) 373
PciSI GCTCTTC 1 cut(s) 675
PdiI GCCGGC 1 cut(s) 375
PfeI GAWTC 1 cut(s) 778
PkrI GCNGC 5 cut(s) 61, 187, 334, 576, 950
PleI GAGTC 6 cut(s) 213, 505, 726, 780, 901, 983
PpsI GAGTC 6 cut(s) 213, 505, 726, 780, 901, 983
PshBI ATTAAT 1 cut(s) 603
Psp124BI GAGCTC 1 cut(s) 591
Psp6I CCWGG 2 cut(s) 97, 165
PspGI CCWGG 2 cut(s) 97, 165
PspN4I GGNNCC 2 cut(s) 58, 91
PspPI GGNCC 2 cut(s) 90, 105
PspXI VCTCGAGB 1 cut(s) 647
PstNI CAGNNNCTG 2 cut(s) 315, 781
PsuI RGATCY 3 cut(s) 642, 673, 900
PvuII CAGCTG 1 cut(s) 595
RsaI GTAC 5 cut(s) 151, 157, 514, 536, 958
RsaNI GTAC 5 cut(s) 150, 156, 513, 535, 957
SacI GAGCTC 1 cut(s) 591
SapI GCTCTTC 1 cut(s) 675
SaqAI TTAA 3 cut(s) 603, 830, 1014
SatI GCNGC 5 cut(s) 60, 186, 333, 575, 949
Sau3AI GATC 4 cut(s) 119, 642, 673, 900
Sau96I GGNCC 2 cut(s) 90, 105
ScaI AGTACT 1 cut(s) 958
SchI GAGTC 6 cut(s) 214, 506, 726, 781, 902, 983
ScrFI CCNGG 2 cut(s) 99, 167
SduI GDGCHC 3 cut(s) 15, 166, 591
SfaNI GCATC 2 cut(s) 837, 938
SfcI CTRYAG 1 cut(s) 952
Sfr274I CTCGAG 1 cut(s) 647
SinI GGWCC 2 cut(s) 90, 105
SlaI CTCGAG 1 cut(s) 647
SmlI CTYRAG 2 cut(s) 138, 647
SmoI CTYRAG 2 cut(s) 138, 647
Sse9I AATT 4 cut(s) 539, 698, 827, 935
SsiI CCGC 4 cut(s) 60, 275, 635, 658
SspMI CTAG 5 cut(s) 27, 78, 329, 653, 677
SstI GAGCTC 1 cut(s) 591
StyD4I CCNGG 2 cut(s) 97, 165
StyI CCWWGG 1 cut(s) 26
TaaI ACNGT 1 cut(s) 956
TaiI ACGT 1 cut(s) 392
TaqI TCGA 3 cut(s) 118, 648, 968
TasI AATT 4 cut(s) 539, 698, 827, 935
TatI WGTACW 1 cut(s) 956
TauI GCSGC 1 cut(s) 62
TfiI GAWTC 1 cut(s) 778
Tru1I TTAA 3 cut(s) 603, 830, 1014
Tru9I TTAA 3 cut(s) 603, 830, 1014
TscAI CASTG 2 cut(s) 187, 553
TseFI GTSAC 1 cut(s) 385
TseI GCWGC 4 cut(s) 185, 332, 574, 948
Tsp45I GTSAC 1 cut(s) 385
TspDTI ATGAA 4 cut(s) 20, 353, 711, 927
TspRI CASTG 2 cut(s) 187, 553
VpaK11BI GGWCC 2 cut(s) 90, 105
VspI ATTAAT 1 cut(s) 603
XapI RAATTY 1 cut(s) 935
XbaI TCTAGA 1 cut(s) 676
XhoI CTCGAG 1 cut(s) 647
XmaJI CCTAGG 1 cut(s) 26
XspI CTAG 5 cut(s) 27, 78, 329, 653, 677
ZrmI AGTACT 1 cut(s) 958
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.