MADS-box protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 262 |
| Acc36I | ACCTGC | 1 cut(s) | 262 |
| AciI | CCGC | 2 cut(s) | 518, 529 |
| AclWI | GGATC | 1 cut(s) | 257 |
| AcoI | YGGCCR | 3 cut(s) | 37, 67, 619 |
| AcsI | RAATTY | 1 cut(s) | 170 |
| AcuI | CTGAAG | 3 cut(s) | 168, 336, 363 |
| AfaI | GTAC | 2 cut(s) | 403, 425 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 628 |
| AgsI | TTSAA | 3 cut(s) | 307, 547, 866 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 886 |
| AjnI | CCWGG | 1 cut(s) | 573 |
| Alw26I | GTCTC | 1 cut(s) | 894 |
| AlwI | GGATC | 1 cut(s) | 257 |
| Ama87I | CYCGRG | 1 cut(s) | 741 |
| AoxI | GGCC | 4 cut(s) | 33, 37, 67, 619 |
| ApeKI | GCWGC | 2 cut(s) | 95, 472 |
| ApoI | RAATTY | 1 cut(s) | 170 |
| AspS9I | GGNCC | 4 cut(s) | 33, 556, 571, 755 |
| AsuC2I | CCSGG | 1 cut(s) | 41 |
| AsuHPI | GGTGA | 5 cut(s) | 226, 286, 563, 739, 826 |
| AvaI | CYCGRG | 1 cut(s) | 741 |
| AvaII | GGWCC | 3 cut(s) | 556, 571, 755 |
| BbvCI | CCTCAGC | 1 cut(s) | 536 |
| BbvI | GCAGC | 2 cut(s) | 107, 459 |
| BccI | CCATC | 6 cut(s) | 38, 66, 73, 622, 718, 845 |
| BceAI | ACGGC | 2 cut(s) | 606, 777 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 7, 41 |
| BciT130I | CCWGG | 1 cut(s) | 575 |
| BclI | TGATCA | 1 cut(s) | 466 |
| BcnI | CCSGG | 1 cut(s) | 41 |
| BcoDI | GTCTC | 1 cut(s) | 894 |
| BfmI | CTRYAG | 3 cut(s) | 16, 473, 584 |
| BfuAI | ACCTGC | 1 cut(s) | 262 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 45, 268 |
| BisI | GCNGC | 2 cut(s) | 96, 473 |
| BlsI | GCNGC | 2 cut(s) | 97, 474 |
| Bme1390I | CCNGG | 2 cut(s) | 41, 575 |
| Bme18I | GGWCC | 3 cut(s) | 556, 571, 755 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 886 |
| BmeT110I | CYCGRG | 1 cut(s) | 741 |
| BmgT120I | GGNCC | 4 cut(s) | 33, 556, 571, 755 |
| BmrFI | CCNGG | 2 cut(s) | 41, 575 |
| BmrI | ACTGGG | 1 cut(s) | 908 |
| BmsI | GCATC | 1 cut(s) | 450 |
| BmuI | ACTGGG | 1 cut(s) | 908 |
| BpmI | CTGGAG | 1 cut(s) | 382 |
| Bpu10I | CCTNAGC | 1 cut(s) | 536 |
| BpuEI | CTTGAG | 1 cut(s) | 376 |
| BpuMI | CCSGG | 1 cut(s) | 41 |
| BsaBI | GATNNNNATC | 1 cut(s) | 239 |
| BsaJI | CCNNGG | 3 cut(s) | 405, 616, 742 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 628 |
| Bse118I | RCCGGY | 3 cut(s) | 35, 91, 262 |
| Bse1I | ACTGG | 3 cut(s) | 376, 399, 903 |
| Bse8I | GATNNNNATC | 1 cut(s) | 239 |
| BseBI | CCWGG | 1 cut(s) | 575 |
| BseDI | CCNNGG | 3 cut(s) | 405, 616, 742 |
| BseGI | GGATG | 5 cut(s) | 49, 84, 415, 583, 729 |
| BseJI | GATNNNNATC | 1 cut(s) | 239 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 628 |
| BseMII | CTCAG | 2 cut(s) | 517, 527 |
| BseNI | ACTGG | 3 cut(s) | 376, 399, 903 |
| BseRI | GAGGAG | 3 cut(s) | 106, 304, 759 |
| BseX3I | CGGCCG | 1 cut(s) | 37 |
| BseXI | GCAGC | 2 cut(s) | 107, 459 |
| Bsh1285I | CGRYCG | 1 cut(s) | 40 |
| BshFI | GGCC | 4 cut(s) | 35, 39, 69, 621 |
| BsiEI | CGRYCG | 1 cut(s) | 40 |
| BsiHKCI | CYCGRG | 1 cut(s) | 741 |
| BsiSI | CCGG | 4 cut(s) | 36, 40, 92, 263 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 628 |
| BsmAI | GTCTC | 1 cut(s) | 894 |
| BsnI | GGCC | 4 cut(s) | 35, 39, 69, 621 |
| BsoBI | CYCGRG | 1 cut(s) | 741 |
| Bsp143I | GATC | 5 cut(s) | 234, 240, 249, 466, 765 |
| Bsp19I | CCATGG | 1 cut(s) | 616 |
| BspACI | CCGC | 2 cut(s) | 518, 529 |
| BspANI | GGCC | 4 cut(s) | 35, 39, 69, 621 |
| BspCNI | CTCAG | 2 cut(s) | 516, 528 |
| BspHI | TCATGA | 1 cut(s) | 562 |
| BspMAI | CTGCAG | 3 cut(s) | 20, 477, 588 |
| BspMI | ACCTGC | 1 cut(s) | 262 |
| BspPI | GGATC | 1 cut(s) | 257 |
| BspQI | GCTCTTC | 1 cut(s) | 312 |
| BsrFI | RCCGGY | 3 cut(s) | 35, 91, 262 |
| BsrI | ACTGG | 3 cut(s) | 376, 399, 903 |
| BssAI | RCCGGY | 3 cut(s) | 35, 91, 262 |
| BssECI | CCNNGG | 3 cut(s) | 405, 616, 742 |
| BssMI | GATC | 5 cut(s) | 234, 240, 249, 466, 765 |
| BssT1I | CCWWGG | 2 cut(s) | 405, 616 |
| Bst2UI | CCWGG | 1 cut(s) | 575 |
| Bst4CI | ACNGT | 2 cut(s) | 53, 851 |
| Bst6I | CTCTTC | 3 cut(s) | 52, 289, 312 |
| BstC8I | GCNNGC | 5 cut(s) | 37, 264, 377, 533, 613 |
| BstDEI | CTNAG | 4 cut(s) | 503, 536, 636, 909 |
| BstDSI | CCRYGG | 1 cut(s) | 616 |
| BstEII | GGTNACC | 1 cut(s) | 274 |
| BstF5I | GGATG | 5 cut(s) | 49, 84, 415, 583, 729 |
| BstKTI | GATC | 5 cut(s) | 237, 243, 252, 469, 768 |
| BstMAI | GTCTC | 1 cut(s) | 894 |
| BstMBI | GATC | 5 cut(s) | 234, 240, 249, 466, 765 |
| BstMCI | CGRYCG | 1 cut(s) | 40 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 45, 268, 469 |
| BstNI | CCWGG | 1 cut(s) | 575 |
| BstPI | GGTNACC | 1 cut(s) | 274 |
| BstSCI | CCNGG | 2 cut(s) | 39, 573 |
| BstSFI | CTRYAG | 3 cut(s) | 16, 473, 584 |
| BstV1I | GCAGC | 2 cut(s) | 107, 459 |
| BstZI | CGGCCG | 1 cut(s) | 37 |
| BsuRI | GGCC | 4 cut(s) | 35, 39, 69, 621 |
| BtgI | CCRYGG | 1 cut(s) | 616 |
| BtsCI | GGATG | 5 cut(s) | 49, 84, 415, 583, 729 |
| BtsI | GCAGTG | 2 cut(s) | 13, 158 |
| BtsIMutI | CAGTG | 2 cut(s) | 13, 158 |
| BveI | ACCTGC | 1 cut(s) | 262 |
| Cac8I | GCNNGC | 5 cut(s) | 37, 264, 377, 533, 613 |
| CciI | TCATGA | 1 cut(s) | 562 |
| Cfr10I | RCCGGY | 3 cut(s) | 35, 91, 262 |
| Cfr13I | GGNCC | 4 cut(s) | 33, 556, 571, 755 |
| CpoI | CGGWCCG | 1 cut(s) | 755 |
| Csp6I | GTAC | 2 cut(s) | 402, 424 |
| CspI | CGGWCCG | 1 cut(s) | 755 |
| CviAII | CATG | 2 cut(s) | 563, 617 |
| CviQI | GTAC | 2 cut(s) | 402, 424 |
| DdeI | CTNAG | 4 cut(s) | 503, 536, 636, 909 |
| DpnI | GATC | 5 cut(s) | 236, 242, 251, 468, 767 |
| DpnII | GATC | 5 cut(s) | 234, 240, 249, 466, 765 |
| DriI | GACNNNNNGTC | 1 cut(s) | 886 |
| EaeI | YGGCCR | 3 cut(s) | 37, 67, 619 |
| EagI | CGGCCG | 1 cut(s) | 37 |
| Eam1104I | CTCTTC | 3 cut(s) | 52, 289, 312 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 886 |
| EarI | CTCTTC | 3 cut(s) | 52, 289, 312 |
| EclXI | CGGCCG | 1 cut(s) | 37 |
| Eco130I | CCWWGG | 2 cut(s) | 405, 616 |
| Eco32I | GATATC | 1 cut(s) | 751 |
| Eco47I | GGWCC | 3 cut(s) | 556, 571, 755 |
| Eco52I | CGGCCG | 1 cut(s) | 37 |
| Eco57I | CTGAAG | 3 cut(s) | 168, 336, 363 |
| Eco88I | CYCGRG | 1 cut(s) | 741 |
| Eco91I | GGTNACC | 1 cut(s) | 274 |
| EcoO109I | RGGNCCY | 1 cut(s) | 556 |
| EcoO65I | GGTNACC | 1 cut(s) | 274 |
| EcoRII | CCWGG | 1 cut(s) | 573 |
| EcoRV | GATATC | 1 cut(s) | 751 |
| EcoT14I | CCWWGG | 2 cut(s) | 405, 616 |
| ErhI | CCWWGG | 2 cut(s) | 405, 616 |
| FaeI | CATG | 2 cut(s) | 566, 620 |
| FaiI | YATR | 5 cut(s) | 435, 564, 618, 653, 665 |
| FatI | CATG | 2 cut(s) | 562, 616 |
| FauI | CCCGC | 1 cut(s) | 536 |
| FbaI | TGATCA | 1 cut(s) | 466 |
| Fnu4HI | GCNGC | 2 cut(s) | 96, 473 |
| FokI | GGATG | 5 cut(s) | 56, 91, 422, 590, 736 |
| FseI | GGCCGGCC | 1 cut(s) | 39 |
| Fsp4HI | GCNGC | 2 cut(s) | 96, 473 |
| GluI | GCNGC | 2 cut(s) | 96, 473 |
| GsuI | CTGGAG | 1 cut(s) | 382 |
| HaeIII | GGCC | 4 cut(s) | 35, 39, 69, 621 |
| HapII | CCGG | 4 cut(s) | 36, 40, 92, 263 |
| Hin1II | CATG | 2 cut(s) | 566, 620 |
| HinfI | GANTC | 4 cut(s) | 328, 338, 451, 818 |
| HpaII | CCGG | 4 cut(s) | 36, 40, 92, 263 |
| HphI | GGTGA | 5 cut(s) | 226, 286, 563, 739, 826 |
| Hpy188I | TCNGA | 5 cut(s) | 187, 343, 755, 817, 880 |
| Hpy188III | TCNNGA | 6 cut(s) | 28, 238, 244, 307, 563, 863 |
| Hpy99I | CGWCG | 2 cut(s) | 206, 763 |
| HpyAV | CCTTC | 4 cut(s) | 289, 541, 569, 797 |
| HpyCH4III | ACNGT | 2 cut(s) | 53, 851 |
| HpyCH4V | TGCA | 6 cut(s) | 13, 18, 168, 419, 475, 586 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 45, 268, 469 |
| HpyF3I | CTNAG | 4 cut(s) | 503, 536, 636, 909 |
| Hsp92II | CATG | 2 cut(s) | 566, 620 |
| KroI | GCCGGC | 2 cut(s) | 35, 262 |
| KroNI | GCCGGC | 2 cut(s) | 37, 264 |
| Ksp22I | TGATCA | 1 cut(s) | 466 |
| Kzo9I | GATC | 5 cut(s) | 234, 240, 249, 466, 765 |
| LguI | GCTCTTC | 1 cut(s) | 312 |
| LmnI | GCTCC | 3 cut(s) | 401, 848, 881 |
| Lsp1109I | GCAGC | 2 cut(s) | 107, 459 |
| LweI | GCATC | 1 cut(s) | 450 |
| MaeIII | GTNAC | 3 cut(s) | 274, 808, 832 |
| MalI | GATC | 5 cut(s) | 236, 242, 251, 468, 767 |
| MboI | GATC | 5 cut(s) | 234, 240, 249, 466, 765 |
| MboII | GAAGA | 9 cut(s) | 16, 69, 118, 218, 244, 306, 329, 812, 878 |
| MluCI | AATT | 2 cut(s) | 170, 599 |
| MmeI | TCCRAC | 4 cut(s) | 459, 756, 870, 903 |
| MroNI | GCCGGC | 2 cut(s) | 35, 262 |
| MslI | CAYNNNNRTG | 1 cut(s) | 621 |
| MspA1I | CMGCKG | 1 cut(s) | 472 |
| MspI | CCGG | 4 cut(s) | 36, 40, 92, 263 |
| MspR9I | CCNGG | 2 cut(s) | 41, 575 |
| MvaI | CCWGG | 1 cut(s) | 575 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 45, 268, 469 |
| NaeI | GCCGGC | 2 cut(s) | 37, 264 |
| NciI | CCSGG | 1 cut(s) | 41 |
| NcoI | CCATGG | 1 cut(s) | 616 |
| NdeII | GATC | 5 cut(s) | 234, 240, 249, 466, 765 |
| NgoMIV | GCCGGC | 2 cut(s) | 35, 262 |
| NlaIII | CATG | 2 cut(s) | 566, 620 |
| NmuCI | GTSAC | 3 cut(s) | 274, 808, 832 |
| PagI | TCATGA | 1 cut(s) | 562 |
| PaqCI | CACCTGC | 1 cut(s) | 262 |
| PciSI | GCTCTTC | 1 cut(s) | 312 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 455 |
| PdiI | GCCGGC | 2 cut(s) | 37, 264 |
| PfeI | GAWTC | 4 cut(s) | 328, 338, 451, 818 |
| PkrI | GCNGC | 2 cut(s) | 97, 474 |
| PpuMI | RGGWCCY | 1 cut(s) | 556 |
| Psp5II | RGGWCCY | 1 cut(s) | 556 |
| Psp6I | CCWGG | 1 cut(s) | 573 |
| PspEI | GGTNACC | 1 cut(s) | 274 |
| PspGI | CCWGG | 1 cut(s) | 573 |
| PspPI | GGNCC | 4 cut(s) | 33, 556, 571, 755 |
| PspPPI | RGGWCCY | 1 cut(s) | 556 |
| PstI | CTGCAG | 3 cut(s) | 20, 477, 588 |
| PvuII | CAGCTG | 1 cut(s) | 472 |
| RigI | GGCCGGCC | 1 cut(s) | 39 |
| RsaI | GTAC | 2 cut(s) | 403, 425 |
| RsaNI | GTAC | 2 cut(s) | 402, 424 |
| RseI | CAYNNNNRTG | 1 cut(s) | 621 |
| Rsr2I | CGGWCCG | 1 cut(s) | 755 |
| RsrII | CGGWCCG | 1 cut(s) | 755 |
| SapI | GCTCTTC | 1 cut(s) | 312 |
| SatI | GCNGC | 2 cut(s) | 96, 473 |
| Sau3AI | GATC | 5 cut(s) | 234, 240, 249, 466, 765 |
| Sau96I | GGNCC | 4 cut(s) | 33, 556, 571, 755 |
| ScrFI | CCNGG | 2 cut(s) | 41, 575 |
| SfaNI | GCATC | 1 cut(s) | 450 |
| SfcI | CTRYAG | 3 cut(s) | 16, 473, 584 |
| SinI | GGWCC | 3 cut(s) | 556, 571, 755 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 621 |
| SmlI | CTYRAG | 1 cut(s) | 391 |
| SmoI | CTYRAG | 1 cut(s) | 391 |
| Sse9I | AATT | 2 cut(s) | 170, 599 |
| SsiI | CCGC | 2 cut(s) | 518, 529 |
| StyD4I | CCNGG | 2 cut(s) | 39, 573 |
| StyI | CCWWGG | 2 cut(s) | 405, 616 |
| TaaI | ACNGT | 2 cut(s) | 53, 851 |
| TaqI | TCGA | 4 cut(s) | 27, 252, 326, 449 |
| TaqII | GACCGA | 1 cut(s) | 772 |
| TasI | AATT | 2 cut(s) | 170, 599 |
| TfiI | GAWTC | 4 cut(s) | 328, 338, 451, 818 |
| TscAI | CASTG | 2 cut(s) | 20, 165 |
| TseFI | GTSAC | 3 cut(s) | 274, 808, 832 |
| TseI | GCWGC | 2 cut(s) | 95, 472 |
| Tsp45I | GTSAC | 3 cut(s) | 274, 808, 832 |
| TspDTI | ATGAA | 3 cut(s) | 17, 551, 594 |
| TspRI | CASTG | 2 cut(s) | 20, 165 |
| VpaK11BI | GGWCC | 3 cut(s) | 556, 571, 755 |
| XapI | RAATTY | 1 cut(s) | 170 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 143 |