MADS-box protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 299, 322, 460 |
| AclWI | GGATC | 2 cut(s) | 301, 345 |
| AcsI | RAATTY | 1 cut(s) | 557 |
| AcuI | CTGAAG | 1 cut(s) | 234 |
| AfaI | GTAC | 3 cut(s) | 178, 200, 580 |
| AgsI | TTSAA | 5 cut(s) | 60, 82, 286, 389, 413 |
| AluBI | AGCT | 8 cut(s) | 89, 154, 171, 253, 259, 316, 349, 497 |
| AluI | AGCT | 8 cut(s) | 89, 154, 171, 253, 259, 316, 349, 497 |
| Alw21I | GWGCWC | 1 cut(s) | 255 |
| Alw26I | GTCTC | 1 cut(s) | 61 |
| AlwI | GGATC | 2 cut(s) | 301, 345 |
| Ama87I | CYCGRG | 1 cut(s) | 311 |
| ApeKI | GCWGC | 3 cut(s) | 238, 457, 570 |
| ApoI | RAATTY | 1 cut(s) | 557 |
| AseI | ATTAAT | 1 cut(s) | 267 |
| AsuHPI | GGTGA | 1 cut(s) | 61 |
| AvaI | CYCGRG | 1 cut(s) | 311 |
| BanII | GRGCYC | 1 cut(s) | 255 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 571, 603 |
| Bbv12I | GWGCWC | 1 cut(s) | 255 |
| BbvCI | CCTCAGC | 1 cut(s) | 117 |
| BbvI | GCAGC | 3 cut(s) | 250, 469, 557 |
| BccI | CCATC | 2 cut(s) | 319, 479 |
| BceAI | ACGGC | 1 cut(s) | 387 |
| BcoDI | GTCTC | 1 cut(s) | 61 |
| BfaI | CTAG | 1 cut(s) | 341 |
| BfmI | CTRYAG | 1 cut(s) | 574 |
| BglII | AGATCT | 1 cut(s) | 522 |
| BisI | GCNGC | 3 cut(s) | 239, 458, 571 |
| BlsI | GCNGC | 3 cut(s) | 240, 459, 572 |
| BmcAI | AGTACT | 1 cut(s) | 580 |
| BmeT110I | CYCGRG | 1 cut(s) | 311 |
| BmsI | GCATC | 2 cut(s) | 459, 560 |
| BpmI | CTGGAG | 5 cut(s) | 111, 151, 157, 239, 281 |
| Bpu10I | CCTNAGC | 3 cut(s) | 117, 249, 317 |
| Bse118I | RCCGGY | 1 cut(s) | 37 |
| Bse1I | ACTGG | 2 cut(s) | 151, 174 |
| Bse3DI | GCAATG | 1 cut(s) | 189 |
| BseGI | GGATG | 3 cut(s) | 190, 330, 474 |
| BseMI | GCAATG | 1 cut(s) | 189 |
| BseMII | CTCAG | 3 cut(s) | 108, 240, 412 |
| BseNI | ACTGG | 2 cut(s) | 151, 174 |
| BseRI | GAGGAG | 2 cut(s) | 79, 604 |
| BseXI | GCAGC | 3 cut(s) | 250, 469, 557 |
| BsiHKAI | GWGCWC | 1 cut(s) | 255 |
| BsiHKCI | CYCGRG | 1 cut(s) | 311 |
| BsiSI | CCGG | 1 cut(s) | 38 |
| BsmAI | GTCTC | 1 cut(s) | 61 |
| BsoBI | CYCGRG | 1 cut(s) | 311 |
| Bsp1286I | GDGCHC | 1 cut(s) | 255 |
| Bsp143I | GATC | 3 cut(s) | 306, 337, 522 |
| BspACI | CCGC | 3 cut(s) | 299, 322, 460 |
| BspCNI | CTCAG | 3 cut(s) | 109, 241, 411 |
| BspPI | GGATC | 2 cut(s) | 301, 345 |
| BspQI | GCTCTTC | 1 cut(s) | 339 |
| BsrDI | GCAATG | 1 cut(s) | 189 |
| BsrFI | RCCGGY | 1 cut(s) | 37 |
| BsrI | ACTGG | 2 cut(s) | 151, 174 |
| BssAI | RCCGGY | 1 cut(s) | 37 |
| BssMI | GATC | 3 cut(s) | 306, 337, 522 |
| Bst4CI | ACNGT | 2 cut(s) | 127, 578 |
| Bst6I | CTCTTC | 1 cut(s) | 339 |
| BstC8I | GCNNGC | 2 cut(s) | 39, 152 |
| BstDEI | CTNAG | 5 cut(s) | 117, 249, 317, 398, 417 |
| BstF5I | GGATG | 3 cut(s) | 190, 330, 474 |
| BstKTI | GATC | 3 cut(s) | 309, 340, 525 |
| BstMAI | GTCTC | 1 cut(s) | 61 |
| BstMBI | GATC | 3 cut(s) | 306, 337, 522 |
| BstSFI | CTRYAG | 1 cut(s) | 574 |
| BstV1I | GCAGC | 3 cut(s) | 250, 469, 557 |
| BstX2I | RGATCY | 3 cut(s) | 306, 337, 522 |
| BstYI | RGATCY | 3 cut(s) | 306, 337, 522 |
| BtsCI | GGATG | 3 cut(s) | 190, 330, 474 |
| BtsIMutI | CAGTG | 1 cut(s) | 210 |
| Cac8I | GCNNGC | 2 cut(s) | 39, 152 |
| Cfr10I | RCCGGY | 1 cut(s) | 37 |
| CseI | GACGC | 1 cut(s) | 122 |
| Csp6I | GTAC | 3 cut(s) | 177, 199, 579 |
| CviAII | CATG | 1 cut(s) | 277 |
| CviQI | GTAC | 3 cut(s) | 177, 199, 579 |
| DdeI | CTNAG | 5 cut(s) | 117, 249, 317, 398, 417 |
| DpnI | GATC | 3 cut(s) | 308, 339, 524 |
| DpnII | GATC | 3 cut(s) | 306, 337, 522 |
| Eam1104I | CTCTTC | 1 cut(s) | 339 |
| EarI | CTCTTC | 1 cut(s) | 339 |
| EciI | GGCGGA | 1 cut(s) | 337 |
| Ecl136II | GAGCTC | 1 cut(s) | 253 |
| Eco24I | GRGCYC | 1 cut(s) | 255 |
| Eco53kI | GAGCTC | 1 cut(s) | 253 |
| Eco57I | CTGAAG | 1 cut(s) | 234 |
| Eco88I | CYCGRG | 1 cut(s) | 311 |
| EcoICRI | GAGCTC | 1 cut(s) | 253 |
| EcoT38I | GRGCYC | 1 cut(s) | 255 |
| FaeI | CATG | 1 cut(s) | 280 |
| FaiI | YATR | 4 cut(s) | 159, 278, 356, 548 |
| FatI | CATG | 1 cut(s) | 276 |
| Fnu4HI | GCNGC | 3 cut(s) | 239, 458, 571 |
| FokI | GGATG | 3 cut(s) | 197, 337, 481 |
| FriOI | GRGCYC | 1 cut(s) | 255 |
| Fsp4HI | GCNGC | 3 cut(s) | 239, 458, 571 |
| FspBI | CTAG | 1 cut(s) | 341 |
| GluI | GCNGC | 3 cut(s) | 239, 458, 571 |
| GsuI | CTGGAG | 5 cut(s) | 111, 151, 157, 239, 281 |
| HapII | CCGG | 1 cut(s) | 38 |
| HgaI | GACGC | 1 cut(s) | 122 |
| Hin1II | CATG | 1 cut(s) | 280 |
| HincII | GTYRAC | 1 cut(s) | 432 |
| HindII | GTYRAC | 1 cut(s) | 432 |
| HinfI | GANTC | 4 cut(s) | 161, 396, 515, 611 |
| HpaII | CCGG | 1 cut(s) | 38 |
| HphI | GGTGA | 1 cut(s) | 61 |
| Hpy166II | GTNNAC | 1 cut(s) | 432 |
| Hpy188I | TCNGA | 3 cut(s) | 520, 556, 619 |
| Hpy188III | TCNNGA | 3 cut(s) | 82, 248, 341 |
| Hpy8I | GTNNAC | 1 cut(s) | 432 |
| Hpy99I | CGWCG | 1 cut(s) | 116 |
| HpyAV | CCTTC | 4 cut(s) | 40, 175, 383, 536 |
| HpyCH4III | ACNGT | 2 cut(s) | 127, 578 |
| HpyCH4IV | ACGT | 1 cut(s) | 53 |
| HpyCH4V | TGCA | 4 cut(s) | 194, 208, 276, 367 |
| HpyF3I | CTNAG | 5 cut(s) | 117, 249, 317, 398, 417 |
| HpySE526I | ACGT | 1 cut(s) | 53 |
| Hsp92II | CATG | 1 cut(s) | 280 |
| KroI | GCCGGC | 1 cut(s) | 37 |
| KroNI | GCCGGC | 1 cut(s) | 39 |
| Kzo9I | GATC | 3 cut(s) | 306, 337, 522 |
| LguI | GCTCTTC | 1 cut(s) | 339 |
| LmnI | GCTCC | 4 cut(s) | 92, 176, 258, 422 |
| Lsp1109I | GCAGC | 3 cut(s) | 250, 469, 557 |
| LweI | GCATC | 2 cut(s) | 459, 560 |
| MaeI | CTAG | 1 cut(s) | 341 |
| MaeII | ACGT | 1 cut(s) | 53 |
| MaeIII | GTNAC | 2 cut(s) | 49, 121 |
| MalI | GATC | 3 cut(s) | 308, 339, 524 |
| MboI | GATC | 3 cut(s) | 306, 337, 522 |
| MboII | GAAGA | 8 cut(s) | 34, 132, 227, 356, 548, 551, 579, 588 |
| MflI | RGATCY | 3 cut(s) | 306, 337, 522 |
| MhlI | GDGCHC | 1 cut(s) | 255 |
| MluCI | AATT | 4 cut(s) | 203, 362, 449, 557 |
| MlyI | GAGTC | 4 cut(s) | 170, 390, 524, 605 |
| MmeI | TCCRAC | 1 cut(s) | 498 |
| MroNI | GCCGGC | 1 cut(s) | 37 |
| MseI | TTAA | 2 cut(s) | 267, 452 |
| MspA1I | CMGCKG | 2 cut(s) | 259, 460 |
| MspI | CCGG | 1 cut(s) | 38 |
| NaeI | GCCGGC | 1 cut(s) | 39 |
| NdeII | GATC | 3 cut(s) | 306, 337, 522 |
| NgoMIV | GCCGGC | 1 cut(s) | 37 |
| NlaIII | CATG | 1 cut(s) | 280 |
| NmuCI | GTSAC | 1 cut(s) | 49 |
| PaeR7I | CTCGAG | 1 cut(s) | 311 |
| PciSI | GCTCTTC | 1 cut(s) | 339 |
| PdiI | GCCGGC | 1 cut(s) | 39 |
| PkrI | GCNGC | 3 cut(s) | 240, 459, 572 |
| PleI | GAGTC | 4 cut(s) | 169, 390, 523, 605 |
| PpsI | GAGTC | 4 cut(s) | 169, 390, 523, 605 |
| PshBI | ATTAAT | 1 cut(s) | 267 |
| Psp124BI | GAGCTC | 1 cut(s) | 255 |
| PspXI | VCTCGAGB | 1 cut(s) | 311 |
| PsuI | RGATCY | 3 cut(s) | 306, 337, 522 |
| PvuII | CAGCTG | 1 cut(s) | 259 |
| RsaI | GTAC | 3 cut(s) | 178, 200, 580 |
| RsaNI | GTAC | 3 cut(s) | 177, 199, 579 |
| SacI | GAGCTC | 1 cut(s) | 255 |
| SapI | GCTCTTC | 1 cut(s) | 339 |
| SaqAI | TTAA | 2 cut(s) | 267, 452 |
| SatI | GCNGC | 3 cut(s) | 239, 458, 571 |
| Sau3AI | GATC | 3 cut(s) | 306, 337, 522 |
| ScaI | AGTACT | 1 cut(s) | 580 |
| SchI | GAGTC | 4 cut(s) | 170, 390, 524, 605 |
| SduI | GDGCHC | 1 cut(s) | 255 |
| SfaNI | GCATC | 2 cut(s) | 459, 560 |
| SfcI | CTRYAG | 1 cut(s) | 574 |
| Sfr274I | CTCGAG | 1 cut(s) | 311 |
| SlaI | CTCGAG | 1 cut(s) | 311 |
| SmlI | CTYRAG | 1 cut(s) | 311 |
| SmoI | CTYRAG | 1 cut(s) | 311 |
| Sse9I | AATT | 4 cut(s) | 203, 362, 449, 557 |
| SsiI | CCGC | 3 cut(s) | 299, 322, 460 |
| SspMI | CTAG | 1 cut(s) | 341 |
| SstI | GAGCTC | 1 cut(s) | 255 |
| TaaI | ACNGT | 2 cut(s) | 127, 578 |
| TaiI | ACGT | 1 cut(s) | 56 |
| TaqI | TCGA | 2 cut(s) | 312, 590 |
| TasI | AATT | 4 cut(s) | 203, 362, 449, 557 |
| TatI | WGTACW | 1 cut(s) | 578 |
| Tru1I | TTAA | 2 cut(s) | 267, 452 |
| Tru9I | TTAA | 2 cut(s) | 267, 452 |
| TscAI | CASTG | 1 cut(s) | 217 |
| TseFI | GTSAC | 1 cut(s) | 49 |
| TseI | GCWGC | 3 cut(s) | 238, 457, 570 |
| Tsp45I | GTSAC | 1 cut(s) | 49 |
| TspDTI | ATGAA | 3 cut(s) | 17, 375, 549 |
| TspRI | CASTG | 1 cut(s) | 217 |
| VspI | ATTAAT | 1 cut(s) | 267 |
| XapI | RAATTY | 1 cut(s) | 557 |
| XbaI | TCTAGA | 1 cut(s) | 340 |
| XhoI | CTCGAG | 1 cut(s) | 311 |
| XspI | CTAG | 1 cut(s) | 341 |
| ZrmI | AGTACT | 1 cut(s) | 580 |